AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0690930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0690930 MtrunA17_Chr4g0039801 99.263 678 5 0 338 1015 465 1142 0.0 1398
Msa0690930 MtrunA17_Chr4g0039801 99.130 345 3 0 1 345 1 345 0.0 719
Msa0690930 MtrunA17_Chr5g0410641 79.764 677 129 2 343 1015 449 1121 0.0 1140
Msa0690930 MtrunA17_Chr5g0410641 60.952 315 105 6 43 345 16 324 5.74e-114 378
Msa0690930 MtrunA17_Chr1g0165411 76.183 676 146 5 343 1015 442 1105 0.0 1077
Msa0690930 MtrunA17_Chr1g0165411 56.928 332 114 9 29 354 20 328 3.14e-113 376
Msa0690930 MtrunA17_Chr1g0165421 73.824 680 169 4 343 1015 456 1133 0.0 1044
Msa0690930 MtrunA17_Chr1g0165421 57.812 320 117 7 29 345 27 331 6.85e-116 384
Msa0690930 MtrunA17_Chr2g0297351 70.458 677 184 6 343 1013 356 1022 0.0 1021
Msa0690930 MtrunA17_Chr2g0297351 61.224 147 51 3 202 345 88 231 9.66e-49 188
Msa0690930 MtrunA17_Chr7g0269741 73.412 677 161 8 351 1015 502 1171 0.0 1017
Msa0690930 MtrunA17_Chr7g0269741 45.260 327 145 9 35 345 61 369 1.15e-70 256
Msa0690930 MtrunA17_Chr7g0274751 69.403 670 50 11 343 1012 293 807 0.0 868
Msa0690930 MtrunA17_Chr7g0274751 87.591 137 16 1 206 342 30 165 1.86e-72 257
Msa0690930 MtrunA17_Chr7g0274751 93.939 33 2 0 106 138 1 33 2.27e-11 68.2
Msa0690930 MtrunA17_Chr4g0073711 50.217 691 255 17 325 1001 406 1021 0.0 660
Msa0690930 MtrunA17_Chr4g0073711 31.461 178 115 3 188 365 157 327 1.41e-16 85.1
Msa0690930 MtrunA17_Chr2g0284211 47.564 698 268 14 328 1001 337 960 0.0 624
Msa0690930 MtrunA17_Chr2g0284211 28.049 246 125 6 132 345 12 237 8.26e-18 89.4
Msa0690930 MtrunA17_Chr8g0352231 47.896 689 255 13 343 1001 447 1061 0.0 623
Msa0690930 MtrunA17_Chr8g0352231 42.308 104 55 1 254 352 236 339 1.15e-13 75.9
Msa0690930 MtrunA17_Chr8g0383701 47.000 700 265 14 338 1006 460 1084 0.0 617
Msa0690930 MtrunA17_Chr8g0383701 36.424 151 74 3 237 365 215 365 8.35e-20 95.9
Msa0690930 MtrunA17_Chr8g0379241 47.926 699 261 16 328 1001 352 972 0.0 613
Msa0690930 MtrunA17_Chr8g0379241 28.114 281 159 8 119 365 1 272 2.86e-19 94.0
Msa0690930 MtrunA17_Chr2g0296991 46.629 712 255 16 338 1001 393 1027 0.0 611
Msa0690930 MtrunA17_Chr2g0296991 25.773 291 168 8 111 365 20 298 9.34e-21 99.0
Msa0690930 MtrunA17_Chr3g0088821 48.041 689 254 16 343 1001 447 1061 0.0 606
Msa0690930 MtrunA17_Chr3g0088821 50.000 86 38 1 272 352 254 339 3.52e-20 97.1
Msa0690930 MtrunA17_Chr3g0137951 45.763 708 279 15 325 1001 436 1069 0.0 598
Msa0690930 MtrunA17_Chr3g0137951 34.694 147 89 3 220 365 217 357 5.46e-19 93.2
Msa0690930 MtrunA17_Chr1g0183381 47.235 669 271 14 338 1000 294 886 0.0 594
Msa0690930 MtrunA17_Chr1g0183381 33.588 131 87 0 233 363 67 197 3.33e-18 90.5
Msa0690930 MtrunA17_Chr1g0201731 47.007 685 280 13 343 1008 467 1087 0.0 590
Msa0690930 MtrunA17_Chr1g0201731 34.722 144 74 2 237 362 223 364 8.67e-18 89.4
Msa0690930 MtrunA17_Chr7g0267731 45.906 684 272 14 343 1001 359 969 0.0 573
Msa0690930 MtrunA17_Chr7g0267731 40.367 109 53 2 257 353 144 252 1.18e-15 82.0
Msa0690930 MtrunA17_Chr8g0364641 43.924 683 283 19 332 1001 369 964 5.18e-178 544
Msa0690930 MtrunA17_Chr8g0364641 30.627 271 161 10 90 346 5 262 5.56e-24 109
Msa0690930 MtrunA17_Chr3g0078671 42.547 691 293 11 343 1001 414 1032 1.25e-177 545
Msa0690930 MtrunA17_Chr3g0078671 28.421 285 155 8 124 365 36 314 4.19e-27 119
Msa0690930 MtrunA17_Chr3g0126641 68.664 217 52 4 522 729 1 210 8.99e-96 301
Msa0690930 MtrunA17_Chr4g0046401 30.783 575 316 12 424 992 232 730 1.26e-67 241
Msa0690930 MtrunA17_Chr2g0322371 28.125 640 355 17 370 992 179 730 3.70e-65 234
Msa0690930 MtrunA17_Chr2g0322361 29.856 623 330 23 370 973 186 720 2.50e-63 229
Msa0690930 MtrunA17_Chr4g0025201 29.068 547 318 12 461 994 247 736 1.50e-60 221
Msa0690930 MtrunA17_Chr2g0322351 30.224 536 295 13 461 982 248 718 7.15e-55 204
Msa0690930 MtrunA17_Chr1g0186381 27.839 546 318 13 458 993 251 730 7.29e-55 204
Msa0690930 MtrunA17_Chr3g0095791 27.072 543 317 14 447 977 215 690 1.50e-50 190
Msa0690930 MtrunA17_Chr3g0077511 26.186 527 310 10 464 977 233 693 7.78e-49 185
Msa0690930 MtrunA17_Chr2g0298581 25.556 540 329 10 446 976 215 690 8.02e-49 185
Msa0690930 MtrunA17_Chr2g0307191 26.394 538 329 11 446 977 215 691 9.56e-49 185
Msa0690930 MtrunA17_Chr3g0102541 25.949 632 369 15 378 999 193 735 4.41e-42 165
Msa0690930 MtrunA17_Chr3g0102551 34.100 261 138 8 328 585 164 393 2.30e-33 138
Msa0690930 MtrunA17_Chr3g0102551 31.132 212 145 1 695 905 428 639 6.45e-25 111
Msa0690930 MtrunA17_Chr3g0102531 37.915 211 108 6 378 585 192 382 5.40e-33 137
Msa0690930 MtrunA17_Chr3g0102531 26.496 351 243 7 657 996 382 728 2.06e-25 113
Msa0690930 MtrunA17_Chr2g0322331 28.344 314 195 6 677 973 51 351 1.72e-30 124
Msa0690930 MtrunA17_Chr0c03g0490021 44.355 124 67 1 846 969 1 122 2.01e-29 114
Msa0690930 MtrunA17_Chr3g0126661 49.573 117 41 5 220 336 5 103 1.12e-23 100
Msa0690930 MtrunA17_Chr2g0322341 46.739 92 48 1 461 551 252 343 3.60e-22 99.8
Msa0690930 MtrunA17_Chr3g0126651 75.000 56 14 0 431 486 16 71 4.22e-22 90.9
Msa0690930 MtrunA17_Chr8g0355061 63.158 57 21 0 846 902 1 57 3.70e-20 85.1
Msa0690930 MtrunA17_Chr7g0252781 60.377 53 21 0 949 1001 19 71 7.58e-15 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0690930 AT3G03050.1 87.537 674 80 3 343 1015 475 1145 0.0 1237
Msa0690930 AT3G03050.1 74.269 342 82 4 9 345 10 350 2.29e-174 540
Msa0690930 AT5G16910.1 85.736 673 91 3 343 1015 478 1145 0.0 1218
Msa0690930 AT5G16910.1 73.926 349 84 2 4 345 5 353 2.91e-167 521
Msa0690930 AT4G38190.1 76.328 659 137 4 343 1001 453 1092 0.0 1066
Msa0690930 AT4G38190.1 59.816 326 113 8 30 350 21 333 1.87e-121 399
Msa0690930 AT2G33100.2 70.398 679 181 6 343 1010 364 1033 0.0 1021
Msa0690930 AT2G33100.2 60.870 161 56 4 198 355 95 251 1.88e-52 200
Msa0690930 AT2G33100.1 70.398 679 181 6 343 1010 364 1033 0.0 1021
Msa0690930 AT2G33100.1 60.870 161 56 4 198 355 95 251 1.88e-52 200
Msa0690930 AT1G02730.1 72.540 681 165 7 351 1015 507 1181 0.0 1019
Msa0690930 AT1G02730.1 44.413 358 162 9 8 345 34 374 4.15e-82 290
Msa0690930 AT1G32180.1 66.032 683 214 7 343 1014 303 978 0.0 941
Msa0690930 AT1G32180.1 50.588 85 42 0 258 342 91 175 1.33e-20 98.6
Msa0690930 AT1G32180.2 66.032 683 214 7 343 1014 303 978 0.0 941
Msa0690930 AT1G32180.2 50.588 85 42 0 258 342 91 175 1.33e-20 98.6
Msa0690930 AT5G17420.1 47.977 692 270 16 325 1001 393 1009 0.0 637
Msa0690930 AT5G17420.1 35.593 118 74 1 248 365 199 314 8.03e-16 83.2
Msa0690930 AT5G05170.1 49.419 688 245 16 343 1001 435 1048 0.0 629
Msa0690930 AT5G05170.1 48.837 86 39 1 272 352 242 327 4.86e-19 93.6
Msa0690930 AT5G44030.1 46.049 734 264 14 328 1001 371 1032 0.0 620
Msa0690930 AT5G44030.1 28.516 256 133 9 132 346 26 272 5.20e-19 93.6
Msa0690930 AT5G44030.2 46.049 734 264 14 328 1001 400 1061 0.0 619
Msa0690930 AT5G44030.2 48.000 75 39 0 272 346 227 301 2.12e-15 82.0
Msa0690930 AT5G44030.3 46.049 734 264 14 328 1001 92 753 0.0 619
Msa0690930 AT4G32410.1 47.881 708 264 18 325 1001 430 1063 0.0 618
Msa0690930 AT4G32410.1 37.857 140 71 4 220 352 213 343 4.54e-19 94.0
Msa0690930 AT2G25540.1 47.893 712 262 19 328 1005 411 1047 0.0 618
Msa0690930 AT2G25540.1 28.378 296 143 9 124 352 30 323 8.30e-23 105
Msa0690930 AT5G64740.1 46.121 696 268 13 338 1001 447 1067 0.0 617
Msa0690930 AT5G64740.1 30.317 221 120 5 167 365 144 352 1.49e-19 95.5
Msa0690930 AT4G18780.1 47.721 702 264 17 328 1001 340 966 0.0 616
Msa0690930 AT4G18780.1 24.498 249 135 5 132 346 12 241 5.18e-17 87.0
Msa0690930 AT2G21770.1 45.404 718 274 15 327 1006 438 1075 0.0 613
Msa0690930 AT2G21770.1 33.775 151 77 3 238 365 208 358 1.15e-17 89.4
Msa0690930 AT5G09870.1 46.254 694 267 13 338 1001 435 1052 0.0 613
Msa0690930 AT5G09870.1 25.949 316 149 9 124 365 36 340 2.78e-23 107
Msa0690930 AT4G39350.1 44.789 710 281 14 327 1001 433 1066 0.0 579
Msa0690930 AT4G39350.1 40.000 100 60 0 266 365 254 353 6.81e-17 86.7
Msa0690930 AT2G32620.4 29.920 625 328 23 397 990 107 652 1.83e-62 225
Msa0690930 AT2G32610.1 29.364 613 321 22 416 997 226 757 4.78e-62 226
Msa0690930 AT2G32620.1 29.920 625 328 23 397 990 203 748 9.22e-62 225
Msa0690930 AT2G32530.1 31.028 506 269 15 457 937 247 697 1.08e-60 222
Msa0690930 AT4G15320.5 29.690 613 318 20 397 975 203 736 3.34e-58 214
Msa0690930 AT4G15320.3 29.690 613 318 20 397 975 203 736 3.43e-58 214
Msa0690930 AT4G15320.4 29.527 613 319 20 397 975 218 751 6.71e-58 214
Msa0690930 AT4G15290.1 29.107 560 298 17 397 932 203 687 7.41e-58 214
Msa0690930 AT2G32540.1 28.214 560 305 15 397 932 203 689 2.07e-56 209
Msa0690930 AT2G32620.3 32.068 474 230 18 397 856 203 598 8.25e-56 205
Msa0690930 AT2G32620.2 32.918 401 189 15 397 789 203 531 1.66e-48 182
Msa0690930 AT4G15320.2 27.648 557 255 18 397 896 203 668 3.37e-44 173
Msa0690930 AT4G15320.1 27.193 570 269 17 397 896 218 711 9.15e-44 172
Msa0690930 AT4G24010.1 40.465 215 110 5 376 589 192 389 1.12e-33 140
Msa0690930 AT4G24010.1 30.403 273 179 5 678 940 402 673 1.18e-29 127
Msa0690930 AT4G23990.1 38.739 222 117 5 365 585 203 406 5.24e-33 137
Msa0690930 AT4G23990.1 27.381 336 230 7 664 992 414 742 1.55e-31 133
Msa0690930 AT4G23990.2 27.381 336 230 7 664 992 200 528 1.40e-31 131
Msa0690930 AT4G23990.2 38.350 206 111 4 381 585 2 192 3.91e-31 130
Msa0690930 AT1G55850.1 41.916 167 79 3 420 585 242 391 6.33e-31 131
Msa0690930 AT1G55850.1 27.036 307 213 6 692 990 417 720 1.83e-23 107
Msa0690930 AT4G24000.1 36.744 215 111 4 376 589 189 379 1.73e-30 129
Msa0690930 AT4G24000.1 26.582 316 216 8 687 993 406 714 3.00e-28 122
Msa0690930 AT4G24000.2 36.667 210 108 4 381 589 2 187 1.38e-29 125
Msa0690930 AT4G24000.2 26.899 316 215 9 687 993 214 522 2.57e-28 121

Find 291 sgRNAs with CRISPR-Local

Find 449 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACAATTCTCGAAGAAATT+TGG 0.083180 4_4:-58847610 Msa0690930:CDS
TTTAGAAGGTTTGCTCTTTA+TGG 0.101361 4_4:-58847778 Msa0690930:CDS
CCAAGTGATGAACCTCTTAT+TGG 0.178203 4_4:-58848201 Msa0690930:CDS
TGTCTATAGTTTGTGAATTA+TGG 0.184274 4_4:-58849326 Msa0690930:CDS
CAGCGTGTTGGATGGATTTA+TGG 0.187827 4_4:-58847394 Msa0690930:CDS
GCCGGTAGTGCTTGTAATTT+TGG 0.215939 4_4:-58852120 Msa0690930:five_prime_UTR
GAATTGCAGGATATTAATTT+AGG 0.236683 4_4:-58850865 Msa0690930:intron
CACAATTCTCGAAGAAATTT+GGG 0.254749 4_4:-58847609 Msa0690930:CDS
AGCAAGTAAATAATATTTCT+TGG 0.260566 4_4:+58846278 None:intergenic
CTGAAGAAATTTCATTCTTC+GGG 0.263526 4_4:+58847177 None:intergenic
CTGCTCATTTGTAATGATTT+CGG 0.270301 4_4:+58850816 None:intergenic
CAGTCAAGGTTAAGTATAAA+AGG 0.293335 4_4:+58848018 None:intergenic
TTTCTTCAGTTTCTGGGTCT+TGG 0.298421 4_4:-58846651 Msa0690930:CDS
ATGGATAAATTCCAACATTA+AGG 0.302386 4_4:+58847143 None:intergenic
TGAAACATCAGAGACAAAAT+AGG 0.307298 4_4:-58848762 Msa0690930:CDS
TCAAGTTCCGTGTTCTTATA+TGG 0.312721 4_4:+58850297 None:intergenic
TCTGAAGAAATTTCATTCTT+CGG 0.312803 4_4:+58847176 None:intergenic
CTGTGGTATGGTGCTGTATA+TGG 0.316392 4_4:+58846697 None:intergenic
AAAGAGGCTTCGTACCGATA+TGG 0.318012 4_4:+58849964 None:intergenic
CTCTTGTGTTGTTCCTGCAC+TGG 0.319012 4_4:-58849392 Msa0690930:CDS
CATCTAGCTGCCGTGCTTCA+AGG 0.325137 4_4:-58846899 Msa0690930:CDS
GAAAGATGCGCGGTCTTCTT+TGG 0.328423 4_4:+58847738 None:intergenic
TATATAGATGCAGTGAAAAT+AGG 0.334238 4_4:-58850348 Msa0690930:CDS
CAGCCGGTTCCTACATATAC+TGG 0.335233 4_4:+58847805 None:intergenic
CTTTCTGTAGTTGTTGCTTT+GGG 0.345629 4_4:-58847720 Msa0690930:CDS
CCTGCACTGTCCCTCTTCTC+TGG 0.348700 4_4:-58847085 Msa0690930:CDS
GGCTCTAACCAATGCATTCA+TGG 0.354035 4_4:+58848062 None:intergenic
AATTATGGTTTGCTTTCTCT+TGG 0.355498 4_4:-58849311 Msa0690930:CDS
TGGCCAAAGGAAGGGGATTT+CGG 0.355911 4_4:-58850087 Msa0690930:CDS
ATACGGATGCAGTCTGGTTA+TGG 0.356092 4_4:-58849353 Msa0690930:CDS
CCACAGATGGCTGGTGCAAA+AGG 0.359198 4_4:-58850474 Msa0690930:CDS
GAACCGGCTGTCTGTTTAGA+AGG 0.363424 4_4:-58847792 Msa0690930:CDS
GATCTCATTGGCCAGGGACT+TGG 0.363673 4_4:-58848684 Msa0690930:CDS
TCATCAGCATTTCCAATAAG+AGG 0.368690 4_4:+58848189 None:intergenic
ATCTTCAACTTCCTTGTTAG+TGG 0.370383 4_4:+58850006 None:intergenic
GGTGGAGAAATGAGCAGTTT+TGG 0.370436 4_4:-58846943 Msa0690930:CDS
TATTCCTGGCTGTGATTCTA+AGG 0.372247 4_4:-58850439 Msa0690930:CDS
GAAACATCAGAGACAAAATA+GGG 0.374954 4_4:-58848761 Msa0690930:CDS
TTCACCTTGACTTCAAAATC+TGG 0.376408 4_4:-58846842 Msa0690930:CDS
CCACTGGAATTGAGTCAATA+AGG 0.376702 4_4:+58847575 None:intergenic
TCTTTCTGTAGTTGTTGCTT+TGG 0.377041 4_4:-58847721 Msa0690930:CDS
TTATATGGCTCTTTGCATCC+TGG 0.379237 4_4:+58850312 None:intergenic
ACTGGAATGAACCGCCTATC+TGG 0.380979 4_4:+58846492 None:intergenic
GGTTTACTCAAAGTCGTTGC+AGG 0.382722 4_4:-58846878 Msa0690930:CDS
TGACCATGCTGGCATAATTC+AGG 0.385671 4_4:-58848632 Msa0690930:intron
TGAACCTTTATAGGCTCAAC+AGG 0.387620 4_4:+58848730 None:intergenic
TATTACCCGTGCACATCTAA+TGG 0.387787 4_4:-58850526 Msa0690930:CDS
TACGGATGCAGTCTGGTTAT+GGG 0.391001 4_4:-58849352 Msa0690930:CDS
TTTGAAACAAAGGGGACATA+TGG 0.392709 4_4:-58850126 Msa0690930:CDS
CAATCATCATATCACTCCTC+TGG 0.393066 4_4:-58846544 Msa0690930:CDS
CCACAGTGGAGCCGGTTACT+AGG 0.393714 4_4:-58846680 Msa0690930:CDS
CATACCTTCCCTCATTGCTT+TGG 0.393894 4_4:+58847975 None:intergenic
TATATGGCTCTTTGCATCCT+GGG 0.396880 4_4:+58850313 None:intergenic
TTTCCGAAATCCCCTTCCTT+TGG 0.396984 4_4:+58850084 None:intergenic
GGTTGCATCAGGTTCTTAGA+TGG 0.399286 4_4:-58847252 Msa0690930:CDS
CACTGAGTTGTTGAGTCAAA+AGG 0.399721 4_4:+58846399 None:intergenic
AGGATGTGGTCACTGGTTAT+AGG 0.400288 4_4:-58847360 Msa0690930:CDS
GGGTCTAAATGTGCTATTCC+TGG 0.405344 4_4:-58850453 Msa0690930:CDS
CCAATAAGAGGTTCATCACT+TGG 0.414955 4_4:+58848201 None:intergenic
AAATGTTACGGTTGGATGTA+AGG 0.415264 4_4:+58850746 None:intergenic
CTTCCACTTCCTCCACCAAA+TGG 0.415305 4_4:-58850246 Msa0690930:CDS
TTCCACTTCCTCCACCAAAT+GGG 0.415672 4_4:-58850245 Msa0690930:CDS
TTCACCATCATGATTACAAT+TGG 0.416130 4_4:+58846752 None:intergenic
AAGGAAGGGGATTTCGGAAA+TGG 0.422255 4_4:-58850081 Msa0690930:CDS
CGATGGTTGTTTGAAACAAA+GGG 0.424075 4_4:-58850135 Msa0690930:CDS
CCTGTTCTCTTCTGAGGTGT+TGG 0.424667 4_4:+58847678 None:intergenic
CTCGCTATCAAGATCATCTC+TGG 0.432065 4_4:+58850686 None:intergenic
ACGATTTACTGGGCATAGCT+TGG 0.434973 4_4:+58849272 None:intergenic
TTACATCCAACCGTAACATT+TGG 0.435589 4_4:-58850744 Msa0690930:CDS
TGAGCTATCATCATGGGAAC+TGG 0.437270 4_4:+58846474 None:intergenic
GTTTCAAGTTCTCTATTCAC+TGG 0.442653 4_4:-58850561 Msa0690930:CDS
GAGTTCAAGGTCAGAATCAA+TGG 0.444934 4_4:-58848847 Msa0690930:CDS
TTACAATTGGCGGTATCATA+AGG 0.446340 4_4:+58846765 None:intergenic
GATGAAGTGGCTGTGAATAA+TGG 0.446503 4_4:-58850276 Msa0690930:CDS
CGATTTACTGGGCATAGCTT+GGG 0.447505 4_4:+58849273 None:intergenic
CGAGGTATGGTGAGAGCACC+AGG 0.448539 4_4:+58847496 None:intergenic
CCAACACCTCAGAAGAGAAC+AGG 0.449199 4_4:-58847678 Msa0690930:CDS
TTGAGATCTATGTGTGAAAA+GGG 0.451569 4_4:+58851910 None:intergenic
GTATCCATAGGTTGGTTATC+CGG 0.451756 4_4:+58850615 None:intergenic
ATGGTTATGGCAATGCAATA+TGG 0.453385 4_4:-58850107 Msa0690930:CDS
CTCAACTTTCTGCGAGATTG+AGG 0.454526 4_4:+58850593 None:intergenic
CTGCTGTTCTCAGCCCATAT+CGG 0.455177 4_4:-58849978 Msa0690930:intron
CAATTCCCTCAAAGGTTTGA+GGG 0.458913 4_4:-58847910 Msa0690930:CDS
AAGAGGCTTCGTACCGATAT+GGG 0.460765 4_4:+58849965 None:intergenic
TTCCTTGTTAGTGGCCTCCA+TGG 0.464132 4_4:+58850015 None:intergenic
GTTAACATGAGAGCCCTTGA+TGG 0.465182 4_4:-58847838 Msa0690930:CDS
AGAGCCCTTGATGGACTTCA+AGG 0.467889 4_4:-58847829 Msa0690930:CDS
TTGCTGTGCTTGAAATTAAG+TGG 0.468667 4_4:-58846988 Msa0690930:CDS
TGCAATATGGCCAAAGGAAG+GGG 0.469151 4_4:-58850094 Msa0690930:CDS
TTGTGTTGTTCCTGCACTGG+AGG 0.472550 4_4:-58849389 Msa0690930:CDS
GCTGATGGATCTCATTGGCC+AGG 0.474596 4_4:-58848691 Msa0690930:CDS
GCGCTGATGAGAAGTCAAAC+TGG 0.475372 4_4:-58850174 Msa0690930:CDS
TGAACCTGTTGAGCCTATAA+AGG 0.476618 4_4:-58848734 Msa0690930:CDS
AGTTCTTCGGCCAAATGTTA+CGG 0.477640 4_4:+58850734 None:intergenic
AGAAAACACCTCCTAGTAAC+CGG 0.477643 4_4:+58846669 None:intergenic
TCAATACCCTCAAACCTTTG+AGG 0.479344 4_4:+58847904 None:intergenic
CAGGTTCTTAGATGGGCTAC+TGG 0.479590 4_4:-58847244 Msa0690930:CDS
CTCCCATCAATCTCACTGAT+AGG 0.482130 4_4:-58847273 Msa0690930:CDS
ATATAAGAAGTGGTCAGGTC+TGG 0.482875 4_4:+58852019 None:intergenic
GGCCCAGTATATGTAGGAAC+CGG 0.483080 4_4:-58847808 Msa0690930:CDS
ACAAAGGGGACATATGGTTA+TGG 0.484592 4_4:-58850120 Msa0690930:CDS
GATGATCTTGATAGCGAGCT+AGG 0.485096 4_4:-58850681 Msa0690930:CDS
GTTTCTAGAGAGAAACGTCC+AGG 0.486844 4_4:-58848111 Msa0690930:CDS
TCTCACTGATAGGTTGCATC+AGG 0.486920 4_4:-58847263 Msa0690930:CDS
CTACCTTGGAACTGTGCCAC+TGG 0.489823 4_4:+58847559 None:intergenic
CAACCTATCAGTGAGATTGA+TGG 0.492695 4_4:+58847270 None:intergenic
CTCTAGAAACATAAACAAGA+AGG 0.493620 4_4:+58848124 None:intergenic
TATCTTATAATCACACTCAC+AGG 0.494707 4_4:+58850383 None:intergenic
TACAATTGGCGGTATCATAA+GGG 0.495010 4_4:+58846766 None:intergenic
TATGCGTGACCCTCCAGTGC+AGG 0.496273 4_4:+58849379 None:intergenic
AGAGAACAGGGCACTAAGGA+TGG 0.496324 4_4:-58847665 Msa0690930:CDS
CAATACCCTCAAACCTTTGA+GGG 0.496350 4_4:+58847905 None:intergenic
TTGTTATATAAGAAGTGGTC+AGG 0.498418 4_4:+58852014 None:intergenic
GCGTGAGTATGATGAGTTCA+AGG 0.499184 4_4:-58848860 Msa0690930:CDS
ACTAAACGTGACGCCTTCCG+TGG 0.504089 4_4:-58847301 Msa0690930:CDS
AGGATAGCATACCTTAATGT+TGG 0.504124 4_4:-58847154 Msa0690930:CDS
CACTCAAGGGGTGACCATGC+TGG 0.505226 4_4:-58848643 Msa0690930:CDS
ATCAAGCAGCTCACGAGGTA+TGG 0.505374 4_4:+58847483 None:intergenic
GCTATGTTCAATTCCCTCAA+AGG 0.512421 4_4:-58847918 Msa0690930:CDS
GTTACTGAGGATGTGGTCAC+TGG 0.513628 4_4:-58847367 Msa0690930:CDS
TTTGAGATCTATGTGTGAAA+AGG 0.514910 4_4:+58851909 None:intergenic
ACCAAAATTACAAGCACTAC+CGG 0.514923 4_4:+58852119 None:intergenic
TTGTTAGTGGCCTCCATGGT+CGG 0.516200 4_4:+58850019 None:intergenic
GACGGATATCAACATCGGTC+AGG 0.516786 4_4:+58848151 None:intergenic
TAGTGCCCTGTTCTCTTCTG+AGG 0.517277 4_4:+58847672 None:intergenic
CCTATCTGGTCTGTACCGGC+TGG 0.517796 4_4:+58846506 None:intergenic
TGGATCAGTTACTGAGGATG+TGG 0.518142 4_4:-58847374 Msa0690930:CDS
TCGATGGTTGTTTGAAACAA+AGG 0.518208 4_4:-58850136 Msa0690930:CDS
ACACTTCACCTGAGCACTCA+AGG 0.518949 4_4:-58848657 Msa0690930:CDS
TCTAGAAACATAAACAAGAA+GGG 0.520713 4_4:+58848125 None:intergenic
TGTGATTTCATGTTGGTATG+AGG 0.522119 4_4:-58847434 Msa0690930:CDS
TGGTCACCCCTTGAGTGCTC+AGG 0.524163 4_4:+58848649 None:intergenic
TGTGTTGTTCCTGCACTGGA+GGG 0.524336 4_4:-58849388 Msa0690930:CDS
GATCAGCAAGTGGCCTACCT+TGG 0.525030 4_4:+58847545 None:intergenic
AAGAGTTGTTATATAAGAAG+TGG 0.525048 4_4:+58852009 None:intergenic
CTTCGGCCAAATGTTACGGT+TGG 0.525516 4_4:+58850738 None:intergenic
TTTGGTGGAGGAAGTGGAAG+TGG 0.525761 4_4:+58850249 None:intergenic
GACAGAGAACGAGTAATCTT+CGG 0.528240 4_4:+58852092 None:intergenic
CCAGAGAAGAGGGACAGTGC+AGG 0.528514 4_4:+58847085 None:intergenic
GAATGCATTGGTTAGAGCCT+CGG 0.531865 4_4:-58848058 Msa0690930:CDS
ATCGACCGGATGAAGTTCTT+CGG 0.533914 4_4:+58850721 None:intergenic
TCAATTCCCTCAAAGGTTTG+AGG 0.534400 4_4:-58847911 Msa0690930:CDS
ACCATCATGATTACAATTGG+CGG 0.535365 4_4:+58846755 None:intergenic
AGAAGAGGGACAGTGCAGGC+AGG 0.535477 4_4:+58847089 None:intergenic
GGAAGGTATGTGCTTTATGA+TGG 0.536478 4_4:-58847962 Msa0690930:CDS
GTGCTTGAAATTAAGTGGTC+AGG 0.536523 4_4:-58846983 Msa0690930:CDS
CAGAAGAGAACAGGGCACTA+AGG 0.537635 4_4:-58847669 Msa0690930:CDS
CTGATCTGTATATTGTCAAA+TGG 0.537846 4_4:-58846793 Msa0690930:CDS
CTGGGCCTTGAAGTCCATCA+AGG 0.538291 4_4:+58847824 None:intergenic
TCCACTTCCTCCACCAAATG+GGG 0.538875 4_4:-58850244 Msa0690930:CDS
CACAGATGGCTGGTGCAAAA+GGG 0.539007 4_4:-58850473 Msa0690930:CDS
TCACGCAAGAGAGGAAATCA+AGG 0.539271 4_4:-58848788 Msa0690930:CDS
TCTTTCAGCGTGTCTTGCAA+AGG 0.539840 4_4:-58852067 Msa0690930:five_prime_UTR
ATCATGATGGTGAACTTGAT+AGG 0.542613 4_4:-58846743 Msa0690930:CDS
AGACTTTGTCGATTTCATCA+AGG 0.542739 4_4:+58850197 None:intergenic
ATAGGAGATGGGATGTGCCC+AGG 0.542804 4_4:-58850330 Msa0690930:CDS
ATCTGGTCTGTACCGGCTGG+TGG 0.543265 4_4:+58846509 None:intergenic
ATGCAGTGAAAATAGGAGAT+GGG 0.544148 4_4:-58850341 Msa0690930:CDS
GATGCAGTGAAAATAGGAGA+TGG 0.544653 4_4:-58850342 Msa0690930:CDS
GACCTGCGACGGATAGAGTC+GGG 0.544788 4_4:+58848820 None:intergenic
TAACCGGCTCCACTGTGGTA+TGG 0.544812 4_4:+58846685 None:intergenic
AACCTATCAGTGAGATTGAT+GGG 0.545416 4_4:+58847271 None:intergenic
CTTTATCCATTAGATGTGCA+CGG 0.545565 4_4:+58850520 None:intergenic
TTTGGCCGAAGAACTTCATC+CGG 0.545571 4_4:-58850726 Msa0690930:CDS
AAAGCAACATGGATGGCTGA+TGG 0.546687 4_4:-58848706 Msa0690930:CDS
AAAAGAATGAGCTATCATCA+TGG 0.547173 4_4:+58846467 None:intergenic
GAAGAATGAAATTTCTTCAG+AGG 0.551800 4_4:-58847174 Msa0690930:CDS
GAAGTGTTCAACCAAGTCCC+TGG 0.552003 4_4:+58848673 None:intergenic
GTTGCATCAGGTTCTTAGAT+GGG 0.553071 4_4:-58847251 Msa0690930:CDS
GATTTCGGAAATGGAAAAGA+TGG 0.553684 4_4:-58850072 Msa0690930:CDS
CACTTCACCTGAGCACTCAA+GGG 0.553733 4_4:-58848656 Msa0690930:CDS
TAAGTGGTCAGGAATTGAGC+TGG 0.554704 4_4:-58846972 Msa0690930:CDS
GTTAAGTATAAAAGGACCGT+TGG 0.556787 4_4:+58848026 None:intergenic
TTTATCCATTAGATGTGCAC+GGG 0.557966 4_4:+58850521 None:intergenic
CATAAACAAGAAGGGGAAGA+CGG 0.558483 4_4:+58848133 None:intergenic
AGCTGGGGCCATGAATGCAT+TGG 0.558654 4_4:-58848070 Msa0690930:CDS
AAAGGTTTGATGGGAAGAAG+AGG 0.558986 4_4:-58846608 Msa0690930:CDS
CCAGCCGGTACAGACCAGAT+AGG 0.559093 4_4:-58846506 Msa0690930:CDS
CACTCCGGATAACCAACCTA+TGG 0.561400 4_4:-58850619 Msa0690930:CDS
AAGGTTTGATGGGAAGAAGA+GGG 0.561777 4_4:-58846607 Msa0690930:CDS
GTAAATCACCCACAGATGGC+TGG 0.562458 4_4:-58850483 Msa0690930:CDS
CAATGAACTGTCCAGAGAAG+AGG 0.562988 4_4:+58847074 None:intergenic
GCGCGGTCTTCTTTGGCGCG+TGG 0.563034 4_4:+58847745 None:intergenic
GGTTATAGGATGCATAATAG+AGG 0.564782 4_4:-58847346 Msa0690930:CDS
TCAAGTTCTCTATTCACTGG+AGG 0.565971 4_4:-58850558 Msa0690930:CDS
TGCGAGATTGAGGTATCCAT+AGG 0.569033 4_4:+58850603 None:intergenic
ATATAACTCCAAAGCAATGA+GGG 0.569533 4_4:-58847983 Msa0690930:CDS
CAGGAATTGAGCTGGAAGAA+TGG 0.570277 4_4:-58846964 Msa0690930:CDS
TGCCCGACTCTATCCGTCGC+AGG 0.570541 4_4:-58848822 Msa0690930:CDS
AGATTGAGGTATCCATAGGT+TGG 0.571127 4_4:+58850607 None:intergenic
CACTTCCTCCACCAAATGGG+GGG 0.571997 4_4:-58850242 Msa0690930:CDS
AATCATCATATCACTCCTCT+GGG 0.574992 4_4:-58846543 Msa0690930:CDS
CTAGAAACATAAACAAGAAG+GGG 0.575023 4_4:+58848126 None:intergenic
AAAGAATGAGCTATCATCAT+GGG 0.575912 4_4:+58846468 None:intergenic
CTTCAAGGCCCAGTATATGT+AGG 0.576572 4_4:-58847814 Msa0690930:CDS
GTTTACTCAAAGTCGTTGCA+GGG 0.576895 4_4:-58846877 Msa0690930:CDS
ACAACACAAGAGCAACCAAA+CGG 0.577597 4_4:+58849403 None:intergenic
ATAGGATGCATAATAGAGGA+TGG 0.578268 4_4:-58847342 Msa0690930:CDS
AATGTTACGGTTGGATGTAA+GGG 0.578477 4_4:+58850747 None:intergenic
CTGAATTGATGAGCCGACCA+TGG 0.579321 4_4:-58850032 Msa0690930:CDS
CTGATGGATCTCATTGGCCA+GGG 0.579469 4_4:-58848690 Msa0690930:CDS
GAACACGGAACTTGATGAAG+TGG 0.579618 4_4:-58850289 Msa0690930:CDS
TGTCTTGCAAAGGTGACAGT+TGG 0.580465 4_4:-58852057 Msa0690930:five_prime_UTR
ATCACCTTAGAATCACAGCC+AGG 0.581701 4_4:+58850435 None:intergenic
GGTCGGCTCATCAATTCAGT+TGG 0.582914 4_4:+58850036 None:intergenic
AAGAAATTTCATTCTTCGGG+TGG 0.585093 4_4:+58847180 None:intergenic
AATGAACTGTCCAGAGAAGA+GGG 0.585838 4_4:+58847075 None:intergenic
ATTCCAGTGGCACAGTTCCA+AGG 0.587403 4_4:-58847562 Msa0690930:CDS
TTGTGATAATGATTTATGAA+AGG 0.587792 4_4:+58851872 None:intergenic
ATAAGAGGTTCATCACTTGG+AGG 0.588519 4_4:+58848204 None:intergenic
CGGTCTTCTTTGGCGCGTGG+AGG 0.588737 4_4:+58847748 None:intergenic
GCCTCGGCTGTCATGTCCAA+CGG 0.589027 4_4:-58848042 Msa0690930:CDS
CATAGGTTGGTTATCCGGAG+TGG 0.589102 4_4:+58850620 None:intergenic
ATAGGTTGGTTATCCGGAGT+GGG 0.590129 4_4:+58850621 None:intergenic
ACGGATGCAGTCTGGTTATG+GGG 0.591620 4_4:-58849351 Msa0690930:CDS
CCACTTCCTCCACCAAATGG+GGG 0.592808 4_4:-58850243 Msa0690930:CDS
GGAGTAACTGATGTATCGAC+CGG 0.593019 4_4:+58850707 None:intergenic
AATGCAATATGGCCAAAGGA+AGG 0.593345 4_4:-58850096 Msa0690930:CDS
ATGCAATATGGCCAAAGGAA+GGG 0.595431 4_4:-58850095 Msa0690930:CDS
TATATAACTCCAAAGCAATG+AGG 0.595884 4_4:-58847984 Msa0690930:CDS
GAGAACAGGGCACTAAGGAT+GGG 0.596261 4_4:-58847664 Msa0690930:CDS
GCACCATACCACAGTGGAGC+CGG 0.596743 4_4:-58846688 Msa0690930:CDS
CTCAATCTCGCAGAAAGTTG+AGG 0.597849 4_4:-58850592 Msa0690930:CDS
ACCTTGACTTCAAAATCTGG+TGG 0.599130 4_4:-58846839 Msa0690930:CDS
GATGGGAGCAGTTCCACGGA+AGG 0.599466 4_4:+58847288 None:intergenic
TGATTTCGGCTTCATATCTG+AGG 0.599698 4_4:+58850830 None:intergenic
GGATGGCTGATGGATCTCAT+TGG 0.599838 4_4:-58848696 Msa0690930:CDS
ACCGCCTATCTGGTCTGTAC+CGG 0.600209 4_4:+58846502 None:intergenic
AACTCCAAAGCAATGAGGGA+AGG 0.600336 4_4:-58847979 Msa0690930:CDS
CCATCAGTGTGATTTCATGT+TGG 0.602601 4_4:-58847441 Msa0690930:CDS
GACCATGGAGGCCACTAACA+AGG 0.603471 4_4:-58850017 Msa0690930:CDS
CCAACATGAAATCACACTGA+TGG 0.603494 4_4:+58847441 None:intergenic
CAGTGGCACAGTTCCAAGGT+AGG 0.604559 4_4:-58847558 Msa0690930:CDS
TGAAGTAAATCACCCACAGA+TGG 0.606620 4_4:-58850487 Msa0690930:CDS
TATGGGCTGAGAACAGCAGC+AGG 0.606682 4_4:+58849982 None:intergenic
GTTTGATGGGAAGAAGAGGG+AGG 0.608204 4_4:-58846604 Msa0690930:CDS
AGTGGGGACAGCGTGTTGGA+TGG 0.609266 4_4:-58847402 Msa0690930:CDS
GTGATTAGCATATCTATCAG+AGG 0.610027 4_4:+58847879 None:intergenic
CATGTTAACATCAAAGAAGA+CGG 0.610600 4_4:+58847852 None:intergenic
ACTGAGTGGGGACAGCGTGT+TGG 0.616731 4_4:-58847406 Msa0690930:CDS
GATTGATGGGAGCAGTTCCA+CGG 0.617764 4_4:+58847284 None:intergenic
GTATGAGGACAAGACTGAGT+GGG 0.618939 4_4:-58847419 Msa0690930:CDS
AAACCTTCTAAACAGACAGC+CGG 0.619310 4_4:+58847789 None:intergenic
TTTGAGTAAACCTTGAAGCA+CGG 0.620499 4_4:+58846889 None:intergenic
GTGGCTATCAATCCACCAGC+CGG 0.620559 4_4:-58846521 Msa0690930:CDS
GAATTGAGCTGGAAGAATGG+TGG 0.621397 4_4:-58846961 Msa0690930:CDS
ATATATAGTGATCACAGTCA+AGG 0.626112 4_4:+58848004 None:intergenic
AGCCGGTTCCTACATATACT+GGG 0.626941 4_4:+58847806 None:intergenic
TGGCAATGCAATATGGCCAA+AGG 0.629077 4_4:-58850100 Msa0690930:CDS
GTTACGGTTGGATGTAAGGG+AGG 0.629747 4_4:+58850750 None:intergenic
CAAAGAGCCATATAAGAACA+CGG 0.630504 4_4:-58850304 Msa0690930:CDS
CCTTATTGACTCAATTCCAG+TGG 0.630704 4_4:-58847575 Msa0690930:CDS
TGATTAGCATATCTATCAGA+GGG 0.632288 4_4:+58847880 None:intergenic
GTACCTGAATTATGCCAGCA+TGG 0.632566 4_4:+58848629 None:intergenic
AGTGCACTTACCACCCACTC+CGG 0.636922 4_4:-58850634 Msa0690930:CDS
GAAAAGCATCTGACCTGCGA+CGG 0.637406 4_4:+58848809 None:intergenic
ACTTCACCTGAGCACTCAAG+GGG 0.638545 4_4:-58848655 Msa0690930:CDS
ACCGCCAATTGTAATCATGA+TGG 0.640166 4_4:-58846756 Msa0690930:CDS
TGACCTGCGACGGATAGAGT+CGG 0.641736 4_4:+58848819 None:intergenic
CAACACCTCAGAAGAGAACA+GGG 0.642386 4_4:-58847677 Msa0690930:CDS
TGGGCCTTGAAGTCCATCAA+GGG 0.642484 4_4:+58847825 None:intergenic
GAGGGAATTGAACATAGCAG+AGG 0.647687 4_4:+58847923 None:intergenic
GAGACTTTGATCACAATCGA+TGG 0.649293 4_4:-58850152 Msa0690930:CDS
GGTTGGTTATCCGGAGTGGG+TGG 0.659629 4_4:+58850624 None:intergenic
AACTTGATAGGAATAGCTGT+CGG 0.663058 4_4:-58846731 Msa0690930:CDS
GAAGTGGCTGTGAATAATGG+AGG 0.663961 4_4:-58850273 Msa0690930:CDS
ACAGCAGGATGATCAGCAAG+TGG 0.664216 4_4:+58847535 None:intergenic
GATGCATCAAGCAGCTCACG+AGG 0.667606 4_4:+58847478 None:intergenic
CAGTGGAGCCGGTTACTAGG+AGG 0.676084 4_4:-58846677 Msa0690930:CDS
ACCGTTGGACATGACAGCCG+AGG 0.677629 4_4:+58848041 None:intergenic
CATCATATCACTCCTCTGGG+TGG 0.679038 4_4:-58846540 Msa0690930:CDS
GATTTATGGATCAGTTACTG+AGG 0.680451 4_4:-58847380 Msa0690930:CDS
ATCTTATAATCACACTCACA+GGG 0.682477 4_4:+58850384 None:intergenic
GATGGTTGTTTGAAACAAAG+GGG 0.686620 4_4:-58850134 Msa0690930:CDS
GTGTCACAGTAATAGCCAAG+AGG 0.689192 4_4:+58847020 None:intergenic
GGGAAGACGGATATCAACAT+CGG 0.693709 4_4:+58848146 None:intergenic
GCCGGTACAGACCAGATAGG+CGG 0.695938 4_4:-58846503 Msa0690930:CDS
ATGTGCTTTATGATGGATCG+TGG 0.700304 4_4:-58847955 Msa0690930:CDS
AAACATCAGAGACAAAATAG+GGG 0.704908 4_4:-58848760 Msa0690930:CDS
TATGAGGACAAGACTGAGTG+GGG 0.705596 4_4:-58847418 Msa0690930:CDS
GCTGCTTGATGCATCAACTG+TGG 0.710663 4_4:-58847470 Msa0690930:CDS
AACAACTACAGAAAGATGCG+CGG 0.723770 4_4:+58847728 None:intergenic
CCTAGTAACCGGCTCCACTG+TGG 0.726079 4_4:+58846680 None:intergenic
GGTATGAGGACAAGACTGAG+TGG 0.734815 4_4:-58847420 Msa0690930:CDS
AATTGATGAGCCGACCATGG+AGG 0.735033 4_4:-58850029 Msa0690930:CDS
AAGTGGCTGTGAATAATGGA+GGG 0.736494 4_4:-58850272 Msa0690930:CDS
TGCTTTATGATGGATCGTGG+TGG 0.736727 4_4:-58847952 Msa0690930:CDS
GTGGATTGATAGCCACCCAG+AGG 0.737395 4_4:+58846528 None:intergenic
GGTATGGTGAGAGCACCAGG+AGG 0.804665 4_4:+58847499 None:intergenic
TATACAGCACCATACCACAG+TGG 0.805259 4_4:-58846694 Msa0690930:CDS
AAGGTGATGAGTGATGAACG+TGG 0.906383 4_4:-58850420 Msa0690930:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATTCTTATTTTGAATAA+TGG - chr4_4:58847190-58847209 Msa0690930:CDS 10.0%
!! AAAAAAATGAAACATAAAAA+TGG + chr4_4:58848447-58848466 None:intergenic 10.0%
!!! TTTTTTTATAATTTCATAGA+TGG + chr4_4:58849751-58849770 None:intergenic 10.0%
!!! AAAAAAGTTGATTTTTTTTG+TGG - chr4_4:58846676-58846695 Msa0690930:CDS 15.0%
!!! AAAAAGTTGATTTTTTTTGT+GGG - chr4_4:58846677-58846696 Msa0690930:CDS 15.0%
!! AAAAAATAATTAAACTCCAA+AGG + chr4_4:58851904-58851923 None:intergenic 15.0%
!!! TTGTGATAATGATTTATGAA+AGG + chr4_4:58846456-58846475 None:intergenic 20.0%
!! TAAAGCATGATTAAGAAAAA+GGG + chr4_4:58846523-58846542 None:intergenic 20.0%
!! ATAAAGCATGATTAAGAAAA+AGG + chr4_4:58846524-58846543 None:intergenic 20.0%
!!! TTAATCATGCTTTATTTTAG+TGG - chr4_4:58846529-58846548 Msa0690930:CDS 20.0%
!!! TAATCATGCTTTATTTTAGT+GGG - chr4_4:58846530-58846549 Msa0690930:CDS 20.0%
!!! AAAAGTTGATTTTTTTTGTG+GGG - chr4_4:58846678-58846697 Msa0690930:CDS 20.0%
!! AGAAAAAACAATGAAACTAT+AGG + chr4_4:58847036-58847055 None:intergenic 20.0%
!!! AATTGTAAACTTCTGAAATT+CGG + chr4_4:58847225-58847244 None:intergenic 20.0%
!! TAAGAGAGAGAAATATTTAA+AGG + chr4_4:58847292-58847311 None:intergenic 20.0%
!!! AAAAAGCATCTAATAAAAAG+AGG + chr4_4:58848380-58848399 None:intergenic 20.0%
!! ATAATAGATTGCATTCAAAT+TGG + chr4_4:58848539-58848558 None:intergenic 20.0%
!! TTGAAACTTCAAAAAATTGA+TGG - chr4_4:58848561-58848580 Msa0690930:intron 20.0%
!! TATTGAAAGTAATAGAAGAA+TGG - chr4_4:58848641-58848660 Msa0690930:CDS 20.0%
!! TAAAACAAGCTGATATAATA+TGG + chr4_4:58848784-58848803 None:intergenic 20.0%
!! ATATAAAAACTTTGATGTCA+CGG - chr4_4:58850009-58850028 Msa0690930:CDS 20.0%
!!! AGATTATTACAATTTTCCTT+TGG - chr4_4:58851885-58851904 Msa0690930:five_prime_UTR 20.0%
!! AGCAAGTAAATAATATTTCT+TGG + chr4_4:58852050-58852069 None:intergenic 20.0%
!!! TAACTCAAGTTTTATAGTTT+AGG - chr4_4:58852069-58852088 Msa0690930:five_prime_UTR 20.0%
! AAGAGTTGTTATATAAGAAG+TGG + chr4_4:58846319-58846338 None:intergenic 25.0%
!!! AATCATGCTTTATTTTAGTG+GGG - chr4_4:58846531-58846550 Msa0690930:CDS 25.0%
!! TTATGAACTTTTTGTGATAG+TGG - chr4_4:58846593-58846612 Msa0690930:CDS 25.0%
! AAAAAAAAATTGCATCAGCT+TGG + chr4_4:58847071-58847090 None:intergenic 25.0%
! AATATAACCAGTTAGTGATT+TGG + chr4_4:58847176-58847195 None:intergenic 25.0%
!! CTCTTATTGTAATACTTTTG+AGG - chr4_4:58847306-58847325 Msa0690930:CDS 25.0%
!!! TTAGATTCACTTTTGAACTT+TGG - chr4_4:58847344-58847363 Msa0690930:CDS 25.0%
!! GTGTTAAATTTTTGAATTGC+AGG - chr4_4:58847447-58847466 Msa0690930:CDS 25.0%
! GAATTGCAGGATATTAATTT+AGG - chr4_4:58847460-58847479 Msa0690930:CDS 25.0%
! TATATAGATGCAGTGAAAAT+AGG - chr4_4:58847977-58847996 Msa0690930:CDS 25.0%
! AAATGGTCATTCAGAATAAA+GGG + chr4_4:58848498-58848517 None:intergenic 25.0%
! AAAATGGTCATTCAGAATAA+AGG + chr4_4:58848499-58848518 None:intergenic 25.0%
!! TTTATTCTGAATGACCATTT+TGG - chr4_4:58848498-58848517 Msa0690930:intron 25.0%
! AGTAATAGAAGAATGGAAAT+TGG - chr4_4:58848648-58848667 Msa0690930:CDS 25.0%
!! TGTCTATAGTTTGTGAATTA+TGG - chr4_4:58848999-58849018 Msa0690930:intron 25.0%
! AAGAATATATCGGCAATAAA+GGG + chr4_4:58849900-58849919 None:intergenic 25.0%
! AAAGAATATATCGGCAATAA+AGG + chr4_4:58849901-58849920 None:intergenic 25.0%
!! TCTGGAACAAAAGAATATAT+CGG + chr4_4:58849910-58849929 None:intergenic 25.0%
!! ACTTTCTAAAAAAGCTAAGT+AGG - chr4_4:58850050-58850069 Msa0690930:CDS 25.0%
! ATTCATCAGTTATTCATTCT+AGG + chr4_4:58850077-58850096 None:intergenic 25.0%
! TCTAGAAACATAAACAAGAA+GGG + chr4_4:58850203-58850222 None:intergenic 25.0%
!! CTCTAAAAACAATGCAATTA+TGG - chr4_4:58851122-58851141 Msa0690930:intron 25.0%
! TCTGAAGAAATTTCATTCTT+CGG + chr4_4:58851152-58851171 None:intergenic 25.0%
! ATGGATAAATTCCAACATTA+AGG + chr4_4:58851185-58851204 None:intergenic 25.0%
!!! TATTCCAGAAAGTTGTTTTT+AGG - chr4_4:58851994-58852013 Msa0690930:five_prime_UTR 25.0%
! TAGGAATGAAAAATGTTTGA+TGG - chr4_4:58852013-58852032 Msa0690930:five_prime_UTR 25.0%
TTGTTATATAAGAAGTGGTC+AGG + chr4_4:58846314-58846333 None:intergenic 30.0%
TTGAGATCTATGTGTGAAAA+GGG + chr4_4:58846418-58846437 None:intergenic 30.0%
! TTTGAGATCTATGTGTGAAA+AGG + chr4_4:58846419-58846438 None:intergenic 30.0%
!!! TTTTTTCTCACCGTGATTAT+CGG + chr4_4:58846660-58846679 None:intergenic 30.0%
! TCTTCATTCTGTTTTCTTCT+TGG - chr4_4:58846781-58846800 Msa0690930:CDS 30.0%
CAACTAGAAAAACTCAAAGT+AGG + chr4_4:58846860-58846879 None:intergenic 30.0%
! AGAATCGAAATAAGCTGTTT+TGG - chr4_4:58846908-58846927 Msa0690930:CDS 30.0%
! AATCTGTGTTGTTCAAATTG+AGG - chr4_4:58846961-58846980 Msa0690930:CDS 30.0%
TCTGTGTTAAAAAGATGTTG+AGG - chr4_4:58847145-58847164 Msa0690930:CDS 30.0%
! TGATGTGTGTTTGTATGTTT+TGG - chr4_4:58847259-58847278 Msa0690930:CDS 30.0%
CTGCTCATTTGTAATGATTT+CGG + chr4_4:58847512-58847531 None:intergenic 30.0%
ATCTTATAATCACACTCACA+GGG + chr4_4:58847944-58847963 None:intergenic 30.0%
TATCTTATAATCACACTCAC+AGG + chr4_4:58847945-58847964 None:intergenic 30.0%
AATGGTCATTCAGAATAAAG+GGG + chr4_4:58848497-58848516 None:intergenic 30.0%
ATAGAAGAATGGAAATTGGA+TGG - chr4_4:58848652-58848671 Msa0690930:CDS 30.0%
! GAAATTGGATGGAAGTTTTA+GGG - chr4_4:58848663-58848682 Msa0690930:CDS 30.0%
ATGTACTGCTCTTAATTCTA+AGG - chr4_4:58848803-58848822 Msa0690930:CDS 30.0%
!! TCTCATCATTTTTATCCGTT+TGG - chr4_4:58848907-58848926 Msa0690930:intron 30.0%
!! AATTATGGTTTGCTTTCTCT+TGG - chr4_4:58849014-58849033 Msa0690930:intron 30.0%
TACAGATCTTAATGTTCTGA+AGG - chr4_4:58849078-58849097 Msa0690930:intron 30.0%
!!! ACTTTTAACTTTTGAGGCAA+TGG - chr4_4:58849291-58849310 Msa0690930:CDS 30.0%
TTTAAGCTGAAGTATGATTC+AGG + chr4_4:58849385-58849404 None:intergenic 30.0%
!!! GGTTTCACTTTGTTTTTGTA+AGG + chr4_4:58849415-58849434 None:intergenic 30.0%
! ATTTTGTCTCTGATGTTTCA+TGG + chr4_4:58849563-58849582 None:intergenic 30.0%
TGAAACATCAGAGACAAAAT+AGG - chr4_4:58849563-58849582 Msa0690930:intron 30.0%
GAAACATCAGAGACAAAATA+GGG - chr4_4:58849564-58849583 Msa0690930:intron 30.0%
AAACATCAGAGACAAAATAG+GGG - chr4_4:58849565-58849584 Msa0690930:intron 30.0%
!!! GTTGCTTTTTGAACCTTTAT+AGG + chr4_4:58849607-58849626 None:intergenic 30.0%
TAAAGGTTCAAAAAGCAACA+TGG - chr4_4:58849608-58849627 Msa0690930:intron 30.0%
TATAATTTCATAGATGGCAG+CGG + chr4_4:58849745-58849764 None:intergenic 30.0%
CATACATAGATGTGAGAAAA+TGG + chr4_4:58849839-58849858 None:intergenic 30.0%
ATTAAACCAGATAACAAGTC+TGG + chr4_4:58849928-58849947 None:intergenic 30.0%
TCCATTGAATCTGTTAAATG+CGG - chr4_4:58849947-58849966 Msa0690930:intron 30.0%
! ACTGATGAATGATATTTTGC+AGG - chr4_4:58850087-58850106 Msa0690930:CDS 30.0%
CTAGAAACATAAACAAGAAG+GGG + chr4_4:58850202-58850221 None:intergenic 30.0%
! CTCTAGAAACATAAACAAGA+AGG + chr4_4:58850204-58850223 None:intergenic 30.0%
CAGTCAAGGTTAAGTATAAA+AGG + chr4_4:58850310-58850329 None:intergenic 30.0%
ATATATAGTGATCACAGTCA+AGG + chr4_4:58850324-58850343 None:intergenic 30.0%
TATATAACTCCAAAGCAATG+AGG - chr4_4:58850341-58850360 Msa0690930:CDS 30.0%
ATATAACTCCAAAGCAATGA+GGG - chr4_4:58850342-58850361 Msa0690930:CDS 30.0%
TGATTAGCATATCTATCAGA+GGG + chr4_4:58850448-58850467 None:intergenic 30.0%
CATGTTAACATCAAAGAAGA+CGG + chr4_4:58850476-58850495 None:intergenic 30.0%
! TTTAGAAGGTTTGCTCTTTA+TGG - chr4_4:58850547-58850566 Msa0690930:CDS 30.0%
TCACAATTCTCGAAGAAATT+TGG - chr4_4:58850715-58850734 Msa0690930:CDS 30.0%
CACAATTCTCGAAGAAATTT+GGG - chr4_4:58850716-58850735 Msa0690930:CDS 30.0%
CTGAAGAAATTTCATTCTTC+GGG + chr4_4:58851151-58851170 None:intergenic 30.0%
GAAGAATGAAATTTCTTCAG+AGG - chr4_4:58851151-58851170 Msa0690930:intron 30.0%
CTGATCTGTATATTGTCAAA+TGG - chr4_4:58851532-58851551 Msa0690930:intron 30.0%
TTCACCATCATGATTACAAT+TGG + chr4_4:58851576-58851595 None:intergenic 30.0%
AAAGAATGAGCTATCATCAT+GGG + chr4_4:58851860-58851879 None:intergenic 30.0%
AAAAGAATGAGCTATCATCA+TGG + chr4_4:58851861-58851880 None:intergenic 30.0%
CATTCCTAAAAACAACTTTC+TGG + chr4_4:58852001-58852020 None:intergenic 30.0%
ATTACTTCCTTGCACATGAT+TGG - chr4_4:58846619-58846638 Msa0690930:CDS 35.0%
TGAATAGTTGCCGATAATCA+CGG - chr4_4:58846647-58846666 Msa0690930:CDS 35.0%
AGCAATGTAGTGAAGTCAAA+AGG - chr4_4:58846714-58846733 Msa0690930:CDS 35.0%
GCAATGTAGTGAAGTCAAAA+GGG - chr4_4:58846715-58846734 Msa0690930:CDS 35.0%
CAATGTAGTGAAGTCAAAAG+GGG - chr4_4:58846716-58846735 Msa0690930:CDS 35.0%
AATCCTTCATAGATGACTCT+TGG + chr4_4:58846813-58846832 None:intergenic 35.0%
TATGTAAGTGTTTGTTCCTG+AGG - chr4_4:58847384-58847403 Msa0690930:CDS 35.0%
AATGTTACGGTTGGATGTAA+GGG + chr4_4:58847581-58847600 None:intergenic 35.0%
AAATGTTACGGTTGGATGTA+AGG + chr4_4:58847582-58847601 None:intergenic 35.0%
TTACATCCAACCGTAACATT+TGG - chr4_4:58847581-58847600 Msa0690930:CDS 35.0%
!! GTTTCAAGTTCTCTATTCAC+TGG - chr4_4:58847764-58847783 Msa0690930:CDS 35.0%
TTTATCCATTAGATGTGCAC+GGG + chr4_4:58847807-58847826 None:intergenic 35.0%
CTTTATCCATTAGATGTGCA+CGG + chr4_4:58847808-58847827 None:intergenic 35.0%
ATGCAGTGAAAATAGGAGAT+GGG - chr4_4:58847984-58848003 Msa0690930:CDS 35.0%
CAAAGAGCCATATAAGAACA+CGG - chr4_4:58848021-58848040 Msa0690930:CDS 35.0%
TCAAGTTCCGTGTTCTTATA+TGG + chr4_4:58848031-58848050 None:intergenic 35.0%
!! AGACTTTGTCGATTTCATCA+AGG + chr4_4:58848131-58848150 None:intergenic 35.0%
! TCGATGGTTGTTTGAAACAA+AGG - chr4_4:58848189-58848208 Msa0690930:CDS 35.0%
! CGATGGTTGTTTGAAACAAA+GGG - chr4_4:58848190-58848209 Msa0690930:CDS 35.0%
! GATGGTTGTTTGAAACAAAG+GGG - chr4_4:58848191-58848210 Msa0690930:CDS 35.0%
! TTTGAAACAAAGGGGACATA+TGG - chr4_4:58848199-58848218 Msa0690930:CDS 35.0%
ATGGTTATGGCAATGCAATA+TGG - chr4_4:58848218-58848237 Msa0690930:CDS 35.0%
GATTTCGGAAATGGAAAAGA+TGG - chr4_4:58848253-58848272 Msa0690930:intron 35.0%
ATCTTCAACTTCCTTGTTAG+TGG + chr4_4:58848322-58848341 None:intergenic 35.0%
! GGAAATTGGATGGAAGTTTT+AGG - chr4_4:58848662-58848681 Msa0690930:CDS 35.0%
!! ATGATTTTGGAGAAGCAATC+TGG - chr4_4:58848695-58848714 Msa0690930:CDS 35.0%
TAATTGTCAGAACACACATG+CGG + chr4_4:58848869-58848888 None:intergenic 35.0%
TGAGACTGTAACAGAAAGAA+AGG + chr4_4:58848892-58848911 None:intergenic 35.0%
ATAAAAATACGGATGCAGTC+TGG - chr4_4:58848966-58848985 Msa0690930:intron 35.0%
GATCTGTAGAACGATTTACT+GGG + chr4_4:58849066-58849085 None:intergenic 35.0%
AGATCTGTAGAACGATTTAC+TGG + chr4_4:58849067-58849086 None:intergenic 35.0%
GAAACAAAGATATCTATGCC+TGG + chr4_4:58849154-58849173 None:intergenic 35.0%
AGCAGCTAAAATTGACAAGA+TGG + chr4_4:58849221-58849240 None:intergenic 35.0%
! TCTTGCTATGTTTCTGATGA+TGG - chr4_4:58849262-58849281 Msa0690930:intron 35.0%
!!! AGGTGCACTTTTAACTTTTG+AGG - chr4_4:58849285-58849304 Msa0690930:CDS 35.0%
!! TGCTAGCTTTGCTAATAACT+GGG - chr4_4:58849321-58849340 Msa0690930:CDS 35.0%
TAGGCTCTATATCATGTTTG+CGG + chr4_4:58849357-58849376 None:intergenic 35.0%
AAGTATGATTCAGGATTCCT+AGG + chr4_4:58849376-58849395 None:intergenic 35.0%
CTCTTCACTTCACATAGAAT+TGG + chr4_4:58849863-58849882 None:intergenic 35.0%
!! TTTGTTCCAGACTTGTTATC+TGG - chr4_4:58849919-58849938 Msa0690930:intron 35.0%
TCATCAGCATTTCCAATAAG+AGG + chr4_4:58850139-58850158 None:intergenic 35.0%
GTTAAGTATAAAAGGACCGT+TGG + chr4_4:58850302-58850321 None:intergenic 35.0%
GTGATTAGCATATCTATCAG+AGG + chr4_4:58850449-58850468 None:intergenic 35.0%
! TCTTTCTGTAGTTGTTGCTT+TGG - chr4_4:58850604-58850623 Msa0690930:CDS 35.0%
!! CTTTCTGTAGTTGTTGCTTT+GGG - chr4_4:58850605-58850624 Msa0690930:CDS 35.0%
TGTGATTTCATGTTGGTATG+AGG - chr4_4:58850891-58850910 Msa0690930:intron 35.0%
GATTTATGGATCAGTTACTG+AGG - chr4_4:58850945-58850964 Msa0690930:intron 35.0%
GGTTATAGGATGCATAATAG+AGG - chr4_4:58850979-58850998 Msa0690930:intron 35.0%
ATAGGATGCATAATAGAGGA+TGG - chr4_4:58850983-58851002 Msa0690930:intron 35.0%
AACCTATCAGTGAGATTGAT+GGG + chr4_4:58851057-58851076 None:intergenic 35.0%
AAGAAATTTCATTCTTCGGG+TGG + chr4_4:58851148-58851167 None:intergenic 35.0%
AGGATAGCATACCTTAATGT+TGG - chr4_4:58851171-58851190 Msa0690930:intron 35.0%
AAAAAGTGACATCGAGTGTT+TGG + chr4_4:58851278-58851297 None:intergenic 35.0%
!!! AACACTCGATGTCACTTTTT+TGG - chr4_4:58851278-58851297 Msa0690930:intron 35.0%
TTGCTGTGCTTGAAATTAAG+TGG - chr4_4:58851337-58851356 Msa0690930:intron 35.0%
!!! AATGAGCAGTTTTGGTTGAT+TGG - chr4_4:58851390-58851409 Msa0690930:intron 35.0%
TTTGAGTAAACCTTGAAGCA+CGG + chr4_4:58851439-58851458 None:intergenic 35.0%
TTCACCTTGACTTCAAAATC+TGG - chr4_4:58851483-58851502 Msa0690930:intron 35.0%
TACAATTGGCGGTATCATAA+GGG + chr4_4:58851562-58851581 None:intergenic 35.0%
TTACAATTGGCGGTATCATA+AGG + chr4_4:58851563-58851582 None:intergenic 35.0%
ACCATCATGATTACAATTGG+CGG + chr4_4:58851573-58851592 None:intergenic 35.0%
! ATCATGATGGTGAACTTGAT+AGG - chr4_4:58851582-58851601 Msa0690930:intron 35.0%
AACTTGATAGGAATAGCTGT+CGG - chr4_4:58851594-58851613 Msa0690930:intron 35.0%
! AGGTGTTTTCTTCAGTTTCT+GGG - chr4_4:58851668-58851687 Msa0690930:intron 35.0%
! CATCTCTATCCTTTTGCAAA+AGG - chr4_4:58851699-58851718 Msa0690930:intron 35.0%
! TCCTTTTGCAAAAGGTTTGA+TGG - chr4_4:58851707-58851726 Msa0690930:intron 35.0%
! CCTTTTGCAAAAGGTTTGAT+GGG - chr4_4:58851708-58851727 Msa0690930:intron 35.0%
GACCATACAAAAACAATGGT+GGG + chr4_4:58851750-58851769 None:intergenic 35.0%
!!! CACCATTGTTTTTGTATGGT+CGG - chr4_4:58851749-58851768 Msa0690930:intron 35.0%
!!! ACCATTGTTTTTGTATGGTC+GGG - chr4_4:58851750-58851769 Msa0690930:intron 35.0%
AATCATCATATCACTCCTCT+GGG - chr4_4:58851782-58851801 Msa0690930:intron 35.0%
GACAGAGAACGAGTAATCTT+CGG + chr4_4:58846236-58846255 None:intergenic 40.0%
ATATAAGAAGTGGTCAGGTC+TGG + chr4_4:58846309-58846328 None:intergenic 40.0%
CAATCAACCAATCATGTGCA+AGG + chr4_4:58846629-58846648 None:intergenic 40.0%
TGACCAAGAGTCATCTATGA+AGG - chr4_4:58846807-58846826 Msa0690930:CDS 40.0%
GGAATCTCCAAATCACTAAC+TGG - chr4_4:58847166-58847185 Msa0690930:CDS 40.0%
TAAGTGTTTGTTCCTGAGGT+GGG - chr4_4:58847388-58847407 Msa0690930:CDS 40.0%
TGATTTCGGCTTCATATCTG+AGG + chr4_4:58847498-58847517 None:intergenic 40.0%
AGTTCTTCGGCCAAATGTTA+CGG + chr4_4:58847594-58847613 None:intergenic 40.0%
!! GTATCCATAGGTTGGTTATC+CGG + chr4_4:58847713-58847732 None:intergenic 40.0%
! AGATTGAGGTATCCATAGGT+TGG + chr4_4:58847721-58847740 None:intergenic 40.0%
TCAAGTTCTCTATTCACTGG+AGG - chr4_4:58847767-58847786 Msa0690930:CDS 40.0%
TATTACCCGTGCACATCTAA+TGG - chr4_4:58847799-58847818 Msa0690930:CDS 40.0%
TGAAGTAAATCACCCACAGA+TGG - chr4_4:58847838-58847857 Msa0690930:CDS 40.0%
TATTCCTGGCTGTGATTCTA+AGG - chr4_4:58847886-58847905 Msa0690930:CDS 40.0%
GATGCAGTGAAAATAGGAGA+TGG - chr4_4:58847983-58848002 Msa0690930:CDS 40.0%
TATATGGCTCTTTGCATCCT+GGG + chr4_4:58848015-58848034 None:intergenic 40.0%
TTATATGGCTCTTTGCATCC+TGG + chr4_4:58848016-58848035 None:intergenic 40.0%
GATGAAGTGGCTGTGAATAA+TGG - chr4_4:58848049-58848068 Msa0690930:CDS 40.0%
! AAGTGGCTGTGAATAATGGA+GGG - chr4_4:58848053-58848072 Msa0690930:CDS 40.0%
GAGACTTTGATCACAATCGA+TGG - chr4_4:58848173-58848192 Msa0690930:CDS 40.0%
ACAAAGGGGACATATGGTTA+TGG - chr4_4:58848205-58848224 Msa0690930:CDS 40.0%
AATGCAATATGGCCAAAGGA+AGG - chr4_4:58848229-58848248 Msa0690930:intron 40.0%
ATGCAATATGGCCAAAGGAA+GGG - chr4_4:58848230-58848249 Msa0690930:intron 40.0%
!!! GAATGACCATTTTGGCTTCA+CGG - chr4_4:58848506-58848525 Msa0690930:intron 40.0%
CAAATACCGTGAAGCCAAAA+TGG + chr4_4:58848515-58848534 None:intergenic 40.0%
! AGGGCTGATTGAGATGATTT+TGG - chr4_4:58848682-58848701 Msa0690930:CDS 40.0%
ACAACACAAGAGCAACCAAA+CGG + chr4_4:58848925-58848944 None:intergenic 40.0%
GAGGGTCACGCATAAAAATA+CGG - chr4_4:58848955-58848974 Msa0690930:intron 40.0%
GACTTTCCTGTAGGATTGTT+AGG + chr4_4:58849124-58849143 None:intergenic 40.0%
TAGCAAGAAAGCTTCTCAAC+TGG + chr4_4:58849250-58849269 None:intergenic 40.0%
!! TGCTATGTTTCTGATGATGG+AGG - chr4_4:58849265-58849284 Msa0690930:intron 40.0%
!! CTGCTAGCTTTGCTAATAAC+TGG - chr4_4:58849320-58849339 Msa0690930:CDS 40.0%
ATATCATGTTTGCGGCAGAA+TGG + chr4_4:58849349-58849368 None:intergenic 40.0%
GCAAACATGATATAGAGCCT+AGG - chr4_4:58849356-58849375 Msa0690930:CDS 40.0%
AGTGAAACCTGATTTCGTGA+AGG - chr4_4:58849426-58849445 Msa0690930:intron 40.0%
GAGTTCAAGGTCAGAATCAA+TGG - chr4_4:58849478-58849497 Msa0690930:intron 40.0%
TGAACCTGTTGAGCCTATAA+AGG - chr4_4:58849591-58849610 Msa0690930:intron 40.0%
TGAACCTTTATAGGCTCAAC+AGG + chr4_4:58849598-58849617 None:intergenic 40.0%
GGTTCAAAAAGCAACATGGA+TGG - chr4_4:58849612-58849631 Msa0690930:intron 40.0%
GCCGCATTTAACAGATTCAA+TGG + chr4_4:58849951-58849970 None:intergenic 40.0%
AAAGTCTGCAACCACAATCT+GGG + chr4_4:58850035-58850054 None:intergenic 40.0%
ATAAGAGGTTCATCACTTGG+AGG + chr4_4:58850124-58850143 None:intergenic 40.0%
CCAATAAGAGGTTCATCACT+TGG + chr4_4:58850127-58850146 None:intergenic 40.0%
CCAAGTGATGAACCTCTTAT+TGG - chr4_4:58850124-58850143 Msa0690930:CDS 40.0%
CATAAACAAGAAGGGGAAGA+CGG + chr4_4:58850195-58850214 None:intergenic 40.0%
!! TTTTTGTTGTGGTCGTAACC+TGG + chr4_4:58850235-58850254 None:intergenic 40.0%
TACGACCACAACAAAAAAGC+TGG - chr4_4:58850238-58850257 Msa0690930:CDS 40.0%
ACGACCACAACAAAAAAGCT+GGG - chr4_4:58850239-58850258 Msa0690930:CDS 40.0%
! GGAAGGTATGTGCTTTATGA+TGG - chr4_4:58850363-58850382 Msa0690930:CDS 40.0%
!! ATGTGCTTTATGATGGATCG+TGG - chr4_4:58850370-58850389 Msa0690930:CDS 40.0%
GCTATGTTCAATTCCCTCAA+AGG - chr4_4:58850407-58850426 Msa0690930:CDS 40.0%
TCAATTCCCTCAAAGGTTTG+AGG - chr4_4:58850414-58850433 Msa0690930:CDS 40.0%
CAATTCCCTCAAAGGTTTGA+GGG - chr4_4:58850415-58850434 Msa0690930:CDS 40.0%
CAATACCCTCAAACCTTTGA+GGG + chr4_4:58850423-58850442 None:intergenic 40.0%
TCAATACCCTCAAACCTTTG+AGG + chr4_4:58850424-58850443 None:intergenic 40.0%
AAACCTTCTAAACAGACAGC+CGG + chr4_4:58850539-58850558 None:intergenic 40.0%
AACAACTACAGAAAGATGCG+CGG + chr4_4:58850600-58850619 None:intergenic 40.0%
CCACTGGAATTGAGTCAATA+AGG + chr4_4:58850753-58850772 None:intergenic 40.0%
!! CCTTATTGACTCAATTCCAG+TGG - chr4_4:58850750-58850769 Msa0690930:CDS 40.0%
GATCATCCTGCTGTGAAAAA+TGG - chr4_4:58850799-58850818 Msa0690930:CDS 40.0%
CCAACATGAAATCACACTGA+TGG + chr4_4:58850887-58850906 None:intergenic 40.0%
CCATCAGTGTGATTTCATGT+TGG - chr4_4:58850884-58850903 Msa0690930:intron 40.0%
CAACCTATCAGTGAGATTGA+TGG + chr4_4:58851058-58851077 None:intergenic 40.0%
GTTGCATCAGGTTCTTAGAT+GGG - chr4_4:58851074-58851093 Msa0690930:intron 40.0%
AATGAACTGTCCAGAGAAGA+GGG + chr4_4:58851253-58851272 None:intergenic 40.0%
!!! CACTTTTTTGGCTTACCTCT+TGG - chr4_4:58851290-58851309 Msa0690930:intron 40.0%
GTGCTTGAAATTAAGTGGTC+AGG - chr4_4:58851342-58851361 Msa0690930:intron 40.0%
!!! AGCAGTTTTGGTTGATTGGA+GGG - chr4_4:58851394-58851413 Msa0690930:intron 40.0%
GTTTACTCAAAGTCGTTGCA+GGG - chr4_4:58851448-58851467 Msa0690930:intron 40.0%
ACCTTGACTTCAAAATCTGG+TGG - chr4_4:58851486-58851505 Msa0690930:intron 40.0%
!!! ACCACCAGATTTTGAAGTCA+AGG + chr4_4:58851490-58851509 None:intergenic 40.0%
ACCGCCAATTGTAATCATGA+TGG - chr4_4:58851569-58851588 Msa0690930:intron 40.0%
AGAAAACACCTCCTAGTAAC+CGG + chr4_4:58851659-58851678 None:intergenic 40.0%
!! GAGGTGTTTTCTTCAGTTTC+TGG - chr4_4:58851667-58851686 Msa0690930:intron 40.0%
! TTTCTTCAGTTTCTGGGTCT+TGG - chr4_4:58851674-58851693 Msa0690930:intron 40.0%
! CCCATCAAACCTTTTGCAAA+AGG + chr4_4:58851711-58851730 None:intergenic 40.0%
AAAGGTTTGATGGGAAGAAG+AGG - chr4_4:58851717-58851736 Msa0690930:intron 40.0%
AAGGTTTGATGGGAAGAAGA+GGG - chr4_4:58851718-58851737 Msa0690930:intron 40.0%
!!! CACCCACCATTGTTTTTGTA+TGG - chr4_4:58851745-58851764 Msa0690930:intron 40.0%
CGACCATACAAAAACAATGG+TGG + chr4_4:58851751-58851770 None:intergenic 40.0%
ACCCGACCATACAAAAACAA+TGG + chr4_4:58851754-58851773 None:intergenic 40.0%
CAATCATCATATCACTCCTC+TGG - chr4_4:58851781-58851800 Msa0690930:intron 40.0%
CACTGAGTTGTTGAGTCAAA+AGG + chr4_4:58851929-58851948 None:intergenic 40.0%
TCTTTCAGCGTGTCTTGCAA+AGG - chr4_4:58846258-58846277 Msa0690930:three_prime_UTR 45.0%
TGTCTTGCAAAGGTGACAGT+TGG - chr4_4:58846268-58846287 Msa0690930:three_prime_UTR 45.0%
GTAAGTGTTTGTTCCTGAGG+TGG - chr4_4:58847387-58847406 Msa0690930:CDS 45.0%
AAGTGTTTGTTCCTGAGGTG+GGG - chr4_4:58847389-58847408 Msa0690930:CDS 45.0%
TTAACTTTATGCCCCACCTC+AGG + chr4_4:58847403-58847422 None:intergenic 45.0%
TTTGGCCGAAGAACTTCATC+CGG - chr4_4:58847599-58847618 Msa0690930:CDS 45.0%
ATCGACCGGATGAAGTTCTT+CGG + chr4_4:58847607-58847626 None:intergenic 45.0%
! GGAGTAACTGATGTATCGAC+CGG + chr4_4:58847621-58847640 None:intergenic 45.0%
CTCGCTATCAAGATCATCTC+TGG + chr4_4:58847642-58847661 None:intergenic 45.0%
!! GATGATCTTGATAGCGAGCT+AGG - chr4_4:58847644-58847663 Msa0690930:CDS 45.0%
!! ATAGGTTGGTTATCCGGAGT+GGG + chr4_4:58847707-58847726 None:intergenic 45.0%
! TGCGAGATTGAGGTATCCAT+AGG + chr4_4:58847725-58847744 None:intergenic 45.0%
CTCAACTTTCTGCGAGATTG+AGG + chr4_4:58847735-58847754 None:intergenic 45.0%
CTCAATCTCGCAGAAAGTTG+AGG - chr4_4:58847733-58847752 Msa0690930:CDS 45.0%
! GGGTCTAAATGTGCTATTCC+TGG - chr4_4:58847872-58847891 Msa0690930:CDS 45.0%
ATCACCTTAGAATCACAGCC+AGG + chr4_4:58847893-58847912 None:intergenic 45.0%
AAGGTGATGAGTGATGAACG+TGG - chr4_4:58847905-58847924 Msa0690930:CDS 45.0%
GAACACGGAACTTGATGAAG+TGG - chr4_4:58848036-58848055 Msa0690930:CDS 45.0%
GAAGTGGCTGTGAATAATGG+AGG - chr4_4:58848052-58848071 Msa0690930:CDS 45.0%
TTCCACTTCCTCCACCAAAT+GGG - chr4_4:58848080-58848099 Msa0690930:CDS 45.0%
! ATTTTAGACCCCCCATTTGG+TGG + chr4_4:58848094-58848113 None:intergenic 45.0%
ACCAAATGGGGGGTCTAAAA+TGG - chr4_4:58848093-58848112 Msa0690930:CDS 45.0%
! TCCATTTTAGACCCCCCATT+TGG + chr4_4:58848097-58848116 None:intergenic 45.0%
TGGCAATGCAATATGGCCAA+AGG - chr4_4:58848225-58848244 Msa0690930:intron 45.0%
TGCAATATGGCCAAAGGAAG+GGG - chr4_4:58848231-58848250 Msa0690930:intron 45.0%
TTTCCGAAATCCCCTTCCTT+TGG + chr4_4:58848244-58848263 None:intergenic 45.0%
AAGGAAGGGGATTTCGGAAA+TGG - chr4_4:58848244-58848263 Msa0690930:intron 45.0%
! AAGAGGCTTCGTACCGATAT+GGG + chr4_4:58848363-58848382 None:intergenic 45.0%
! AAAGAGGCTTCGTACCGATA+TGG + chr4_4:58848364-58848383 None:intergenic 45.0%
! TAAAGGGGAAGTGCAAGACT+TGG + chr4_4:58848482-58848501 None:intergenic 45.0%
ATACGGATGCAGTCTGGTTA+TGG - chr4_4:58848972-58848991 Msa0690930:intron 45.0%
TACGGATGCAGTCTGGTTAT+GGG - chr4_4:58848973-58848992 Msa0690930:intron 45.0%
CGATTTACTGGGCATAGCTT+GGG + chr4_4:58849055-58849074 None:intergenic 45.0%
ACGATTTACTGGGCATAGCT+TGG + chr4_4:58849056-58849075 None:intergenic 45.0%
CCTGTAGGATTGTTAGGACT+TGG + chr4_4:58849118-58849137 None:intergenic 45.0%
CCAAGTCCTAACAATCCTAC+AGG - chr4_4:58849115-58849134 Msa0690930:intron 45.0%
ACAAGTGGTGGTTCTTTCTC+AGG + chr4_4:58849187-58849206 None:intergenic 45.0%
!! ATGGTGTTTGCTGTGACAAG+TGG + chr4_4:58849202-58849221 None:intergenic 45.0%
!!! AACTTTTGAGGCAATGGCTG+AGG - chr4_4:58849297-58849316 Msa0690930:CDS 45.0%
CTACGATCCTTCACGAAATC+AGG + chr4_4:58849436-58849455 None:intergenic 45.0%
GCGTGAGTATGATGAGTTCA+AGG - chr4_4:58849465-58849484 Msa0690930:intron 45.0%
! AGATGCTTTTCACGCAAGAG+AGG - chr4_4:58849528-58849547 Msa0690930:intron 45.0%
TCACGCAAGAGAGGAAATCA+AGG - chr4_4:58849537-58849556 Msa0690930:intron 45.0%
AAAGCAACATGGATGGCTGA+TGG - chr4_4:58849619-58849638 Msa0690930:intron 45.0%
TGACCATGCTGGCATAATTC+AGG - chr4_4:58849693-58849712 Msa0690930:intron 45.0%
GTACCTGAATTATGCCAGCA+TGG + chr4_4:58849699-58849718 None:intergenic 45.0%
GAAAGTCTGCAACCACAATC+TGG + chr4_4:58850036-58850055 None:intergenic 45.0%
GGGAAGACGGATATCAACAT+CGG + chr4_4:58850182-58850201 None:intergenic 45.0%
! GTTTCTAGAGAGAAACGTCC+AGG - chr4_4:58850214-58850233 Msa0690930:CDS 45.0%
CGACCACAACAAAAAAGCTG+GGG - chr4_4:58850240-58850259 Msa0690930:CDS 45.0%
! GGCTCTAACCAATGCATTCA+TGG + chr4_4:58850266-58850285 None:intergenic 45.0%
!! GAATGCATTGGTTAGAGCCT+CGG - chr4_4:58850267-58850286 Msa0690930:CDS 45.0%
AACTCCAAAGCAATGAGGGA+AGG - chr4_4:58850346-58850365 Msa0690930:CDS 45.0%
CATACCTTCCCTCATTGCTT+TGG + chr4_4:58850353-58850372 None:intergenic 45.0%
!! TGCTTTATGATGGATCGTGG+TGG - chr4_4:58850373-58850392 Msa0690930:CDS 45.0%
GAGGGAATTGAACATAGCAG+AGG + chr4_4:58850405-58850424 None:intergenic 45.0%
GTTAACATGAGAGCCCTTGA+TGG - chr4_4:58850487-58850506 Msa0690930:CDS 45.0%
CTTCAAGGCCCAGTATATGT+AGG - chr4_4:58850511-58850530 Msa0690930:CDS 45.0%
! AGCCGGTTCCTACATATACT+GGG + chr4_4:58850522-58850541 None:intergenic 45.0%
CAACACCTCAGAAGAGAACA+GGG - chr4_4:58850648-58850667 Msa0690930:CDS 45.0%
GTATGAGGACAAGACTGAGT+GGG - chr4_4:58850906-58850925 Msa0690930:intron 45.0%
TATGAGGACAAGACTGAGTG+GGG - chr4_4:58850907-58850926 Msa0690930:intron 45.0%
! CAGCGTGTTGGATGGATTTA+TGG - chr4_4:58850931-58850950 Msa0690930:intron 45.0%
TGGATCAGTTACTGAGGATG+TGG - chr4_4:58850951-58850970 Msa0690930:intron 45.0%
! AGGATGTGGTCACTGGTTAT+AGG - chr4_4:58850965-58850984 Msa0690930:intron 45.0%
CTCCCATCAATCTCACTGAT+AGG - chr4_4:58851052-58851071 Msa0690930:intron 45.0%
TCTCACTGATAGGTTGCATC+AGG - chr4_4:58851062-58851081 Msa0690930:intron 45.0%
GGTTGCATCAGGTTCTTAGA+TGG - chr4_4:58851073-58851092 Msa0690930:intron 45.0%
CAATGAACTGTCCAGAGAAG+AGG + chr4_4:58851254-58851273 None:intergenic 45.0%
GTGTCACAGTAATAGCCAAG+AGG + chr4_4:58851308-58851327 None:intergenic 45.0%
TAAGTGGTCAGGAATTGAGC+TGG - chr4_4:58851353-58851372 Msa0690930:intron 45.0%
CAGGAATTGAGCTGGAAGAA+TGG - chr4_4:58851361-58851380 Msa0690930:intron 45.0%
GAATTGAGCTGGAAGAATGG+TGG - chr4_4:58851364-58851383 Msa0690930:intron 45.0%
! GGTGGAGAAATGAGCAGTTT+TGG - chr4_4:58851382-58851401 Msa0690930:intron 45.0%
!!! GAGCAGTTTTGGTTGATTGG+AGG - chr4_4:58851393-58851412 Msa0690930:intron 45.0%
GGTTTACTCAAAGTCGTTGC+AGG - chr4_4:58851447-58851466 Msa0690930:intron 45.0%
!! CTGTGGTATGGTGCTGTATA+TGG + chr4_4:58851631-58851650 None:intergenic 45.0%
TATACAGCACCATACCACAG+TGG - chr4_4:58851631-58851650 Msa0690930:intron 45.0%
TGAGCTATCATCATGGGAAC+TGG + chr4_4:58851854-58851873 None:intergenic 45.0%
GTTACGGTTGGATGTAAGGG+AGG + chr4_4:58847578-58847597 None:intergenic 50.0%
CTTCGGCCAAATGTTACGGT+TGG + chr4_4:58847590-58847609 None:intergenic 50.0%
!! CATAGGTTGGTTATCCGGAG+TGG + chr4_4:58847708-58847727 None:intergenic 50.0%
CACTCCGGATAACCAACCTA+TGG - chr4_4:58847706-58847725 Msa0690930:CDS 50.0%
GTAAATCACCCACAGATGGC+TGG - chr4_4:58847842-58847861 Msa0690930:CDS 50.0%
! CTTTTGCACCAGCCATCTGT+GGG + chr4_4:58847853-58847872 None:intergenic 50.0%
CACAGATGGCTGGTGCAAAA+GGG - chr4_4:58847852-58847871 Msa0690930:CDS 50.0%
TTTGGTGGAGGAAGTGGAAG+TGG + chr4_4:58848079-58848098 None:intergenic 50.0%
CTTCCACTTCCTCCACCAAA+TGG - chr4_4:58848079-58848098 Msa0690930:CDS 50.0%
TCCACTTCCTCCACCAAATG+GGG - chr4_4:58848081-58848100 Msa0690930:CDS 50.0%
! ATGGGGGGTCTAAAATGGAG+AGG - chr4_4:58848098-58848117 Msa0690930:CDS 50.0%
! GCGCTGATGAGAAGTCAAAC+TGG - chr4_4:58848151-58848170 Msa0690930:CDS 50.0%
TGGCCAAAGGAAGGGGATTT+CGG - chr4_4:58848238-58848257 Msa0690930:intron 50.0%
! GGTCGGCTCATCAATTCAGT+TGG + chr4_4:58848292-58848311 None:intergenic 50.0%
CTGAATTGATGAGCCGACCA+TGG - chr4_4:58848293-58848312 Msa0690930:intron 50.0%
AATTGATGAGCCGACCATGG+AGG - chr4_4:58848296-58848315 Msa0690930:intron 50.0%
TTGTTAGTGGCCTCCATGGT+CGG + chr4_4:58848309-58848328 None:intergenic 50.0%
TTCCTTGTTAGTGGCCTCCA+TGG + chr4_4:58848313-58848332 None:intergenic 50.0%
CTGCTGTTCTCAGCCCATAT+CGG - chr4_4:58848347-58848366 Msa0690930:intron 50.0%
! CTCTTGTGTTGTTCCTGCAC+TGG - chr4_4:58848933-58848952 Msa0690930:intron 50.0%
! TTGTGTTGTTCCTGCACTGG+AGG - chr4_4:58848936-58848955 Msa0690930:intron 50.0%
! TGTGTTGTTCCTGCACTGGA+GGG - chr4_4:58848937-58848956 Msa0690930:intron 50.0%
ACGGATGCAGTCTGGTTATG+GGG - chr4_4:58848974-58848993 Msa0690930:intron 50.0%
GGCAGATCAGACTTTCCTGT+AGG + chr4_4:58849133-58849152 None:intergenic 50.0%
ACAGGAAAGTCTGATCTGCC+AGG - chr4_4:58849133-58849152 Msa0690930:intron 50.0%
!! GTGTTTGCTGTGACAAGTGG+TGG + chr4_4:58849199-58849218 None:intergenic 50.0%
!! GAAAAGCATCTGACCTGCGA+CGG + chr4_4:58849519-58849538 None:intergenic 50.0%
! GGATGGCTGATGGATCTCAT+TGG - chr4_4:58849629-58849648 Msa0690930:intron 50.0%
! CTGATGGATCTCATTGGCCA+GGG - chr4_4:58849635-58849654 Msa0690930:intron 50.0%
! GAAGTGTTCAACCAAGTCCC+TGG + chr4_4:58849655-58849674 None:intergenic 50.0%
ACACTTCACCTGAGCACTCA+AGG - chr4_4:58849668-58849687 Msa0690930:intron 50.0%
CACTTCACCTGAGCACTCAA+GGG - chr4_4:58849669-58849688 Msa0690930:intron 50.0%
ACTTCACCTGAGCACTCAAG+GGG - chr4_4:58849670-58849689 Msa0690930:intron 50.0%
GCGGCTTATGCAATCCATTG+CGG - chr4_4:58849966-58849985 Msa0690930:intron 50.0%
GACGGATATCAACATCGGTC+AGG + chr4_4:58850177-58850196 None:intergenic 50.0%
!!! TGGCCCCAGCTTTTTTGTTG+TGG + chr4_4:58850246-58850265 None:intergenic 50.0%
!! AGAGCCCTTGATGGACTTCA+AGG - chr4_4:58850496-58850515 Msa0690930:CDS 50.0%
TGGGCCTTGAAGTCCATCAA+GGG + chr4_4:58850503-58850522 None:intergenic 50.0%
GGCCCAGTATATGTAGGAAC+CGG - chr4_4:58850517-58850536 Msa0690930:CDS 50.0%
! CAGCCGGTTCCTACATATAC+TGG + chr4_4:58850523-58850542 None:intergenic 50.0%
GAACCGGCTGTCTGTTTAGA+AGG - chr4_4:58850533-58850552 Msa0690930:CDS 50.0%
GAAAGATGCGCGGTCTTCTT+TGG + chr4_4:58850590-58850609 None:intergenic 50.0%
!! CCTGTTCTCTTCTGAGGTGT+TGG + chr4_4:58850650-58850669 None:intergenic 50.0%
CCAACACCTCAGAAGAGAAC+AGG - chr4_4:58850647-58850666 Msa0690930:CDS 50.0%
TAGTGCCCTGTTCTCTTCTG+AGG + chr4_4:58850656-58850675 None:intergenic 50.0%
! CAGAAGAGAACAGGGCACTA+AGG - chr4_4:58850656-58850675 Msa0690930:CDS 50.0%
! AGAGAACAGGGCACTAAGGA+TGG - chr4_4:58850660-58850679 Msa0690930:CDS 50.0%
! GAGAACAGGGCACTAAGGAT+GGG - chr4_4:58850661-58850680 Msa0690930:CDS 50.0%
ATTCCAGTGGCACAGTTCCA+AGG - chr4_4:58850763-58850782 Msa0690930:CDS 50.0%
ACAGCAGGATGATCAGCAAG+TGG + chr4_4:58850793-58850812 None:intergenic 50.0%
!! GGACGTCCATTTTTCACAGC+AGG + chr4_4:58850808-58850827 None:intergenic 50.0%
GTGAAAAATGGACGTCCTCC+TGG - chr4_4:58850811-58850830 Msa0690930:CDS 50.0%
ATCAAGCAGCTCACGAGGTA+TGG + chr4_4:58850845-58850864 None:intergenic 50.0%
GCTGCTTGATGCATCAACTG+TGG - chr4_4:58850855-58850874 Msa0690930:five_prime_UTR 50.0%
GGTATGAGGACAAGACTGAG+TGG - chr4_4:58850905-58850924 Msa0690930:intron 50.0%
GTTACTGAGGATGTGGTCAC+TGG - chr4_4:58850958-58850977 Msa0690930:intron 50.0%
GATTGATGGGAGCAGTTCCA+CGG + chr4_4:58851044-58851063 None:intergenic 50.0%
!! CAGGTTCTTAGATGGGCTAC+TGG - chr4_4:58851081-58851100 Msa0690930:intron 50.0%
GTTTGATGGGAAGAAGAGGG+AGG - chr4_4:58851721-58851740 Msa0690930:intron 50.0%
CATCATATCACTCCTCTGGG+TGG - chr4_4:58851785-58851804 Msa0690930:intron 50.0%
ACTGGAATGAACCGCCTATC+TGG + chr4_4:58851836-58851855 None:intergenic 50.0%
AGTGCACTTACCACCCACTC+CGG - chr4_4:58847691-58847710 Msa0690930:CDS 55.0%
! CCTTTTGCACCAGCCATCTG+TGG + chr4_4:58847854-58847873 None:intergenic 55.0%
CCACAGATGGCTGGTGCAAA+AGG - chr4_4:58847851-58847870 Msa0690930:CDS 55.0%
ATAGGAGATGGGATGTGCCC+AGG - chr4_4:58847995-58848014 Msa0690930:CDS 55.0%
CCACTTCCTCCACCAAATGG+GGG - chr4_4:58848082-58848101 Msa0690930:CDS 55.0%
CACTTCCTCCACCAAATGGG+GGG - chr4_4:58848083-58848102 Msa0690930:CDS 55.0%
! TTAGACCCCCCATTTGGTGG+AGG + chr4_4:58848091-58848110 None:intergenic 55.0%
GACCATGGAGGCCACTAACA+AGG - chr4_4:58848308-58848327 Msa0690930:intron 55.0%
! TATGGGCTGAGAACAGCAGC+AGG + chr4_4:58848346-58848365 None:intergenic 55.0%
TGACCTGCGACGGATAGAGT+CGG + chr4_4:58849509-58849528 None:intergenic 55.0%
! GCTGATGGATCTCATTGGCC+AGG - chr4_4:58849634-58849653 Msa0690930:intron 55.0%
GATCTCATTGGCCAGGGACT+TGG - chr4_4:58849641-58849660 Msa0690930:intron 55.0%
CTTTGCAACTGCGACCGCAA+TGG + chr4_4:58849983-58850002 None:intergenic 55.0%
TGATGTCACGGCCCAGATTG+TGG - chr4_4:58850021-58850040 Msa0690930:CDS 55.0%
AGCTGGGGCCATGAATGCAT+TGG - chr4_4:58850255-58850274 Msa0690930:CDS 55.0%
CTGGGCCTTGAAGTCCATCA+AGG + chr4_4:58850504-58850523 None:intergenic 55.0%
CTACCTTGGAACTGTGCCAC+TGG + chr4_4:58850769-58850788 None:intergenic 55.0%
CAGTGGCACAGTTCCAAGGT+AGG - chr4_4:58850767-58850786 Msa0690930:CDS 55.0%
GATCAGCAAGTGGCCTACCT+TGG + chr4_4:58850783-58850802 None:intergenic 55.0%
GATGCATCAAGCAGCTCACG+AGG + chr4_4:58850850-58850869 None:intergenic 55.0%
ACTAAACGTGACGCCTTCCG+TGG - chr4_4:58851024-58851043 Msa0690930:intron 55.0%
CATCTAGCTGCCGTGCTTCA+AGG - chr4_4:58851426-58851445 Msa0690930:intron 55.0%
! TAACCGGCTCCACTGTGGTA+TGG + chr4_4:58851643-58851662 None:intergenic 55.0%
! GTGGATTGATAGCCACCCAG+AGG + chr4_4:58851800-58851819 None:intergenic 55.0%
GTGGCTATCAATCCACCAGC+CGG - chr4_4:58851804-58851823 Msa0690930:intron 55.0%
ACCGCCTATCTGGTCTGTAC+CGG + chr4_4:58851826-58851845 None:intergenic 55.0%
! GGTTGGTTATCCGGAGTGGG+TGG + chr4_4:58847704-58847723 None:intergenic 60.0%
! CCCCCATTTGGTGGAGGAAG+TGG + chr4_4:58848085-58848104 None:intergenic 60.0%
TATGCGTGACCCTCCAGTGC+AGG + chr4_4:58848949-58848968 None:intergenic 60.0%
GACCTGCGACGGATAGAGTC+GGG + chr4_4:58849508-58849527 None:intergenic 60.0%
TGGTCACCCCTTGAGTGCTC+AGG + chr4_4:58849679-58849698 None:intergenic 60.0%
CACTCAAGGGGTGACCATGC+TGG - chr4_4:58849682-58849701 Msa0690930:intron 60.0%
GCCTCGGCTGTCATGTCCAA+CGG - chr4_4:58850283-58850302 Msa0690930:CDS 60.0%
ACCGTTGGACATGACAGCCG+AGG + chr4_4:58850287-58850306 None:intergenic 60.0%
!! GGTATGGTGAGAGCACCAGG+AGG + chr4_4:58850829-58850848 None:intergenic 60.0%
!! CGAGGTATGGTGAGAGCACC+AGG + chr4_4:58850832-58850851 None:intergenic 60.0%
ACTGAGTGGGGACAGCGTGT+TGG - chr4_4:58850919-58850938 Msa0690930:intron 60.0%
AGTGGGGACAGCGTGTTGGA+TGG - chr4_4:58850923-58850942 Msa0690930:intron 60.0%
GATGGGAGCAGTTCCACGGA+AGG + chr4_4:58851040-58851059 None:intergenic 60.0%
AGAAGAGGGACAGTGCAGGC+AGG + chr4_4:58851239-58851258 None:intergenic 60.0%
CCAGAGAAGAGGGACAGTGC+AGG + chr4_4:58851243-58851262 None:intergenic 60.0%
CCTGCACTGTCCCTCTTCTC+TGG - chr4_4:58851240-58851259 Msa0690930:intron 60.0%
GCACCATACCACAGTGGAGC+CGG - chr4_4:58851637-58851656 Msa0690930:intron 60.0%
! CCTAGTAACCGGCTCCACTG+TGG + chr4_4:58851648-58851667 None:intergenic 60.0%
CCACAGTGGAGCCGGTTACT+AGG - chr4_4:58851645-58851664 Msa0690930:intron 60.0%
CAGTGGAGCCGGTTACTAGG+AGG - chr4_4:58851648-58851667 Msa0690930:intron 60.0%
!! ATCTGGTCTGTACCGGCTGG+TGG + chr4_4:58851819-58851838 None:intergenic 60.0%
! CCTATCTGGTCTGTACCGGC+TGG + chr4_4:58851822-58851841 None:intergenic 60.0%
CCAGCCGGTACAGACCAGAT+AGG - chr4_4:58851819-58851838 Msa0690930:intron 60.0%
GCCGGTACAGACCAGATAGG+CGG - chr4_4:58851822-58851841 Msa0690930:intron 60.0%
TGCCCGACTCTATCCGTCGC+AGG - chr4_4:58849503-58849522 Msa0690930:intron 65.0%
CGGTCTTCTTTGGCGCGTGG+AGG + chr4_4:58850580-58850599 None:intergenic 65.0%
GCGCGGTCTTCTTTGGCGCG+TGG + chr4_4:58850583-58850602 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 58846208 58852139 58846208 ID=Msa0690930;Name=Msa0690930
chr4_4 mRNA 58846208 58852139 58846208 ID=Msa0690930-mRNA-1;Parent=Msa0690930;Name=Msa0690930-mRNA-1;_AED=0.07;_eAED=0.07;_QI=302|0.75|0.6|1|0.75|0.6|5|276|1015
chr4_4 exon 58846208 58848238 58846208 ID=Msa0690930-mRNA-1:exon:15908;Parent=Msa0690930-mRNA-1
chr4_4 exon 58848633 58848899 58848633 ID=Msa0690930-mRNA-1:exon:15907;Parent=Msa0690930-mRNA-1
chr4_4 exon 58849281 58849440 58849281 ID=Msa0690930-mRNA-1:exon:15906;Parent=Msa0690930-mRNA-1
chr4_4 exon 58849979 58850878 58849979 ID=Msa0690930-mRNA-1:exon:15905;Parent=Msa0690930-mRNA-1
chr4_4 exon 58851872 58852139 58851872 ID=Msa0690930-mRNA-1:exon:15904;Parent=Msa0690930-mRNA-1
chr4_4 five_prime_UTR 58851872 58852139 58851872 ID=Msa0690930-mRNA-1:five_prime_utr;Parent=Msa0690930-mRNA-1
chr4_4 five_prime_UTR 58850845 58850878 58850845 ID=Msa0690930-mRNA-1:five_prime_utr;Parent=Msa0690930-mRNA-1
chr4_4 CDS 58849979 58850844 58849979 ID=Msa0690930-mRNA-1:cds;Parent=Msa0690930-mRNA-1
chr4_4 CDS 58849281 58849440 58849281 ID=Msa0690930-mRNA-1:cds;Parent=Msa0690930-mRNA-1
chr4_4 CDS 58848633 58848899 58848633 ID=Msa0690930-mRNA-1:cds;Parent=Msa0690930-mRNA-1
chr4_4 CDS 58846484 58848238 58846484 ID=Msa0690930-mRNA-1:cds;Parent=Msa0690930-mRNA-1
chr4_4 three_prime_UTR 58846208 58846483 58846208 ID=Msa0690930-mRNA-1:three_prime_utr;Parent=Msa0690930-mRNA-1
Gene Sequence

>Msa0690930

ATGAAGCCGAAATCATTACAAATGAGCAGATCATCTTTGTCAACATCTTCTGATGTATCTGAAGCACAGAAGCCTCCCTTACATCCAACCGTAACATTTGGCCGAAGAACTTCATCCGGTCGATACATCAGTTACTCCAGAGATGATCTTGATAGCGAGCTAGGAAGTAATGACTTCATGAACTATACAGTGCACTTACCACCCACTCCGGATAACCAACCTATGGATACCTCAATCTCGCAGAAAGTTGAGGAGCAGTATGTTTCAAGTTCTCTATTCACTGGAGGATTTAACAGTATTACCCGTGCACATCTAATGGATAAAGTTACAGAATCTGAAGTAAATCACCCACAGATGGCTGGTGCAAAAGGGTCTAAATGTGCTATTCCTGGCTGTGATTCTAAGGTGATGAGTGATGAACGTGGTGACGACATTCTTCCCTGTGAGTGTGATTATAAGATATGTAGAGATTGCTATATAGATGCAGTGAAAATAGGAGATGGGATGTGCCCAGGATGCAAAGAGCCATATAAGAACACGGAACTTGATGAAGTGGCTGTGAATAATGGAGGGCCACTTCCACTTCCTCCACCAAATGGGGGGTCTAAAATGGAGAGGAGATTGTCCTTGATGAAATCGACAAAGTCTGCGCTGATGAGAAGTCAAACTGGAGACTTTGATCACAATCGATGGTTGTTTGAAACAAAGGGGACATATGGTTATGGCAATGCAATATGGCCAAAGGAAGGGGATTTCGGAAATGGAAAAGATGGTGATGTTTCTGAGCCAACTGAATTGATGAGCCGACCATGGAGGCCACTAACAAGGAAGTTGAAGATACCTGCTGCTGTTCTCAGCCCATATCGTCTCATCATTTTTATCCGTTTGGTTGCTCTTGTGTTGTTCCTGCACTGGAGGGTCACGCATAAAAATACGGATGCAGTCTGGTTATGGGGCATGTCTATAGTTTGTGAATTATGGTTTGCTTTCTCTTGGCTTCTTGATCAACTGCCCAAGCTATGCCCAGATCGTAGAAGATTGAAGCGTGAGTATGATGAGTTCAAGGTCAGAATCAATGGTTTGCCCGACTCTATCCGTCGCAGGTCAGATGCTTTTCACGCAAGAGAGGAAATCAAGGCCATGAAACATCAGAGACAAAATAGGGGTGATGAACCTGTTGAGCCTATAAAGGTTCAAAAAGCAACATGGATGGCTGATGGATCTCATTGGCCAGGGACTTGGTTGAACACTTCACCTGAGCACTCAAGGGGTGACCATGCTGGCATAATTCAGGTGATGTTGAAACCTCCAAGTGATGAACCTCTTATTGGAAATGCTGATGATGCAAAGCTTATTGACCTGACCGATGTTGATATCCGTCTTCCCCTTCTTGTTTATGTTTCTAGAGAGAAACGTCCAGGTTACGACCACAACAAAAAAGCTGGGGCCATGAATGCATTGGTTAGAGCCTCGGCTGTCATGTCCAACGGTCCTTTTATACTTAACCTTGACTGTGATCACTATATATATAACTCCAAAGCAATGAGGGAAGGTATGTGCTTTATGATGGATCGTGGTGGTGATCGCCTCTGCTATGTTCAATTCCCTCAAAGGTTTGAGGGTATTGATCCCTCTGATAGATATGCTAATCACAACACCGTCTTCTTTGATGTTAACATGAGAGCCCTTGATGGACTTCAAGGCCCAGTATATGTAGGAACCGGCTGTCTGTTTAGAAGGTTTGCTCTTTATGGTTTTGATCCTCCACGCGCCAAAGAAGACCGCGCATCTTTCTGTAGTTGTTGCTTTGGGCGTAATAAGAAGAAGCATGCCAACACCTCAGAAGAGAACAGGGCACTAAGGATGGGTGACGACTCTGACGATGAAGAGATGAATCTTTCACAATTCTCGAAGAAATTTGGGAACTCAAATATCCTTATTGACTCAATTCCAGTGGCACAGTTCCAAGGTAGGCCACTTGCTGATCATCCTGCTGTGAAAAATGGACGTCCTCCTGGTGCTCTCACCATACCTCGTGAGCTGCTTGATGCATCAACTGTGGCAGAAGCCATCAGTGTGATTTCATGTTGGTATGAGGACAAGACTGAGTGGGGACAGCGTGTTGGATGGATTTATGGATCAGTTACTGAGGATGTGGTCACTGGTTATAGGATGCATAATAGAGGATGGAAGTCAGTTTACTGCGTAACTAAACGTGACGCCTTCCGTGGAACTGCTCCCATCAATCTCACTGATAGGTTGCATCAGGTTCTTAGATGGGCTACTGGCTCAGTTGAGATATTCTTCTCTAAAAACAATGCAATTATGGCCACCCGAAGAATGAAATTTCTTCAGAGGATAGCATACCTTAATGTTGGAATTTATCCATTCACTTCGTTTTTTCTTATTGTCTATTGCTTCCTGCCTGCACTGTCCCTCTTCTCTGGACAGTTCATTGTCCAAACACTCGATGTCACTTTTTTGGCTTACCTCTTGGCTATTACTGTGACACTGTGCATTCTTGCTGTGCTTGAAATTAAGTGGTCAGGAATTGAGCTGGAAGAATGGTGGAGAAATGAGCAGTTTTGGTTGATTGGAGGGACTAGTGCACATCTAGCTGCCGTGCTTCAAGGTTTACTCAAAGTCGTTGCAGGGATTGAAATCTCATTCACCTTGACTTCAAAATCTGGTGGTGATGATGTTGACGACGAGTATGCTGATCTGTATATTGTCAAATGGTCATCCCTTATGATACCGCCAATTGTAATCATGATGGTGAACTTGATAGGAATAGCTGTCGGAGTTAGCAGAACCATATACAGCACCATACCACAGTGGAGCCGGTTACTAGGAGGTGTTTTCTTCAGTTTCTGGGTCTTGGCTCATCTCTATCCTTTTGCAAAAGGTTTGATGGGAAGAAGAGGGAGGACACCCACCATTGTTTTTGTATGGTCGGGTCTAATAGCAATCATCATATCACTCCTCTGGGTGGCTATCAATCCACCAGCCGGTACAGACCAGATAGGCGGTTCATTCCAGTTCCCATGA
Protein sequence

>Msa0690930

MKPKSLQMSRSSLSTSSDVSEAQKPPLHPTVTFGRRTSSGRYISYSRDDLDSELGSNDFMNYTVHLPPTPDNQPMDTSISQKVEEQYVSSSLFTGGFNSITRAHLMDKVTESEVNHPQMAGAKGSKCAIPGCDSKVMSDERGDDILPCECDYKICRDCYIDAVKIGDGMCPGCKEPYKNTELDEVAVNNGGPLPLPPPNGGSKMERRLSLMKSTKSALMRSQTGDFDHNRWLFETKGTYGYGNAIWPKEGDFGNGKDGDVSEPTELMSRPWRPLTRKLKIPAAVLSPYRLIIFIRLVALVLFLHWRVTHKNTDAVWLWGMSIVCELWFAFSWLLDQLPKLCPDRRRLKREYDEFKVRINGLPDSIRRRSDAFHAREEIKAMKHQRQNRGDEPVEPIKVQKATWMADGSHWPGTWLNTSPEHSRGDHAGIIQVMLKPPSDEPLIGNADDAKLIDLTDVDIRLPLLVYVSREKRPGYDHNKKAGAMNALVRASAVMSNGPFILNLDCDHYIYNSKAMREGMCFMMDRGGDRLCYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRFALYGFDPPRAKEDRASFCSCCFGRNKKKHANTSEENRALRMGDDSDDEEMNLSQFSKKFGNSNILIDSIPVAQFQGRPLADHPAVKNGRPPGALTIPRELLDASTVAEAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKNNAIMATRRMKFLQRIAYLNVGIYPFTSFFLIVYCFLPALSLFSGQFIVQTLDVTFLAYLLAITVTLCILAVLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVVAGIEISFTLTSKSGGDDVDDEYADLYIVKWSSLMIPPIVIMMVNLIGIAVGVSRTIYSTIPQWSRLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAIIISLLWVAINPPAGTDQIGGSFQFP*