Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1392750 | XP_013453403.1 | 79.938 | 643 | 65 | 4 | 30 | 630 | 1 | 621 | 0.0 | 920 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1392750 | A0A072UCU8 | 79.938 | 643 | 65 | 4 | 30 | 630 | 1 | 621 | 0.0 | 920 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017510 | Msa1392750 | 0.809577 | 1.766070e-50 | -8.615850e-47 |
| Msa0110970 | Msa1392750 | 0.801216 | 9.999054e-49 | -8.615850e-47 |
| Msa1358280 | Msa1392750 | 0.911892 | 3.632275e-83 | -8.615850e-47 |
| Msa1374550 | Msa1392750 | 0.817388 | 3.384234e-52 | -8.615850e-47 |
| Msa0157290 | Msa1392750 | 0.810223 | 1.282301e-50 | -8.615850e-47 |
| Msa0392490 | Msa1392750 | 0.800704 | 1.272123e-48 | -8.615850e-47 |
| Msa0487630 | Msa1392750 | 0.810076 | 1.379483e-50 | -8.615850e-47 |
| Msa0880140 | Msa1392750 | 0.806256 | 8.983567e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1392750 | MtrunA17_Chr5g0397401 | 79.938 | 643 | 65 | 4 | 30 | 630 | 1 | 621 | 0.0 | 920 |
| Msa1392750 | MtrunA17_Chr8g0386851 | 52.314 | 497 | 171 | 9 | 195 | 630 | 238 | 729 | 3.24e-144 | 436 |
| Msa1392750 | MtrunA17_Chr8g0386851 | 41.606 | 274 | 121 | 10 | 30 | 274 | 1 | 264 | 1.78e-30 | 127 |
| Msa1392750 | MtrunA17_Chr4g0032351 | 31.250 | 368 | 196 | 15 | 280 | 630 | 549 | 876 | 9.65e-28 | 119 |
| Msa1392750 | MtrunA17_Chr2g0328721 | 48.062 | 129 | 57 | 5 | 446 | 569 | 754 | 877 | 1.69e-24 | 108 |
| Msa1392750 | MtrunA17_Chr1g0186181 | 28.446 | 341 | 178 | 11 | 277 | 561 | 264 | 594 | 6.32e-24 | 106 |
| Msa1392750 | MtrunA17_Chr7g0240931 | 29.630 | 297 | 168 | 12 | 280 | 560 | 530 | 801 | 6.38e-23 | 103 |
| Msa1392750 | MtrunA17_Chr4g0008861 | 28.523 | 298 | 172 | 10 | 276 | 560 | 607 | 876 | 2.31e-21 | 99.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1392750 | AT4G11450.1 | 34.040 | 708 | 320 | 22 | 45 | 630 | 12 | 694 | 2.56e-80 | 268 |
| Msa1392750 | AT1G63520.1 | 32.134 | 389 | 195 | 11 | 272 | 630 | 179 | 528 | 5.21e-46 | 171 |
| Msa1392750 | AT5G59020.1 | 29.810 | 369 | 195 | 18 | 280 | 630 | 458 | 780 | 6.71e-24 | 107 |
| Msa1392750 | AT2G29510.1 | 27.027 | 370 | 196 | 13 | 280 | 630 | 525 | 839 | 4.59e-21 | 98.6 |
| Msa1392750 | AT1G04490.9 | 34.184 | 196 | 100 | 8 | 379 | 561 | 210 | 389 | 6.09e-21 | 95.9 |
| Msa1392750 | AT1G04490.5 | 34.184 | 196 | 100 | 8 | 379 | 561 | 210 | 389 | 6.09e-21 | 95.9 |
| Msa1392750 | AT1G04490.6 | 34.184 | 196 | 100 | 8 | 379 | 561 | 210 | 389 | 6.09e-21 | 95.9 |
| Msa1392750 | AT1G04490.3 | 34.184 | 196 | 100 | 8 | 379 | 561 | 210 | 389 | 6.09e-21 | 95.9 |
| Msa1392750 | AT1G04490.7 | 34.184 | 196 | 100 | 8 | 379 | 561 | 210 | 389 | 6.09e-21 | 95.9 |
| Msa1392750 | AT1G04490.2 | 34.184 | 196 | 100 | 8 | 379 | 561 | 210 | 389 | 6.09e-21 | 95.9 |
| Msa1392750 | AT1G04490.1 | 34.184 | 196 | 100 | 8 | 379 | 561 | 210 | 389 | 6.09e-21 | 95.9 |
| Msa1392750 | AT1G04490.8 | 34.184 | 196 | 100 | 8 | 379 | 561 | 210 | 389 | 6.09e-21 | 95.9 |
| Msa1392750 | AT2G33360.2 | 36.782 | 174 | 88 | 6 | 404 | 564 | 270 | 434 | 2.60e-20 | 94.7 |
| Msa1392750 | AT2G33360.1 | 36.782 | 174 | 88 | 6 | 404 | 564 | 425 | 589 | 5.02e-20 | 94.7 |
| Msa1392750 | AT5G01030.3 | 39.655 | 116 | 61 | 2 | 445 | 560 | 612 | 718 | 1.17e-19 | 94.0 |
| Msa1392750 | AT5G01030.1 | 39.655 | 116 | 61 | 2 | 445 | 560 | 612 | 718 | 1.17e-19 | 94.0 |
| Msa1392750 | AT5G01030.2 | 39.655 | 116 | 61 | 2 | 445 | 560 | 612 | 718 | 1.17e-19 | 94.0 |
| Msa1392750 | AT2G37930.1 | 33.871 | 124 | 68 | 3 | 439 | 559 | 388 | 500 | 1.37e-15 | 80.5 |
| Msa1392750 | AT2G37930.3 | 33.871 | 124 | 68 | 3 | 439 | 559 | 416 | 528 | 1.48e-15 | 80.5 |
| Msa1392750 | AT2G37930.4 | 33.871 | 124 | 68 | 3 | 439 | 559 | 416 | 528 | 1.48e-15 | 80.5 |
| Msa1392750 | AT1G04490.4 | 34.437 | 151 | 72 | 7 | 379 | 516 | 210 | 346 | 8.58e-14 | 73.9 |
Find 135 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTATCTCATTACAATATT+TGG | 0.129685 | tig0021525:+36617 | None:intergenic |
| TTCACTTCTTACCAAATTTC+AGG | 0.167787 | tig0021525:+36858 | None:intergenic |
| GAATTAGAAGATGGAGTATT+TGG | 0.195876 | tig0021525:-38417 | Msa1392750:CDS |
| GTTAATGATTCTCTTGTAAT+TGG | 0.204795 | tig0021525:-38961 | Msa1392750:CDS |
| GAGTAGGTAATGCTTTAAAT+TGG | 0.219018 | tig0021525:-38563 | Msa1392750:CDS |
| ATTTGTCAATAGAGAAATTA+AGG | 0.231675 | tig0021525:-38712 | Msa1392750:CDS |
| TGTTGGTAGGACCTGAAATT+TGG | 0.234521 | tig0021525:-36869 | Msa1392750:three_prime_UTR |
| TTCAAAGATTAGAAGTAATA+AGG | 0.259001 | tig0021525:-38983 | Msa1392750:CDS |
| TTTACCTTAAACTCAAAATA+AGG | 0.270888 | tig0021525:+38621 | None:intergenic |
| GAGGTTGCGACTGTGGTGGC+TGG | 0.277543 | tig0021525:-38056 | Msa1392750:CDS |
| CTCTTGTCTCTACCTTCTTT+TGG | 0.282253 | tig0021525:-40089 | Msa1392750:five_prime_UTR |
| CAATCACTTTCTGCTGGATA+TGG | 0.291670 | tig0021525:+38892 | None:intergenic |
| TCTAGTTTATGAGATCTAAA+TGG | 0.292871 | tig0021525:+39357 | None:intergenic |
| TTCTTGTTCCTGTGCTTGTA+TGG | 0.323518 | tig0021525:-39100 | Msa1392750:CDS |
| ATTGAATTGTGCATAAATTC+AGG | 0.325515 | tig0021525:-39054 | Msa1392750:CDS |
| TTTGGTGTTACAAATTATCT+TGG | 0.330407 | tig0021525:+36635 | None:intergenic |
| ACCTTCTTCAGTAATATCTA+AGG | 0.332298 | tig0021525:-39154 | Msa1392750:CDS |
| GCACTGTATATGTTCAAATA+AGG | 0.333451 | tig0021525:+36719 | None:intergenic |
| ACCAACAATTGCATACAATA+TGG | 0.339112 | tig0021525:+36885 | None:intergenic |
| ACCCGCCCGATAGGAGAAAA+AGG | 0.340515 | tig0021525:+37000 | None:intergenic |
| ATGAGATGGAAGAACAGAAT+TGG | 0.341418 | tig0021525:+39473 | None:intergenic |
| TTTAGATCTCATAAACTAGA+AGG | 0.341549 | tig0021525:-39354 | Msa1392750:CDS |
| AAGGAGAAAGCATGTAGAAA+TGG | 0.343187 | tig0021525:-39429 | Msa1392750:CDS |
| TGGAGTATTTGGAAACTATA+TGG | 0.345752 | tig0021525:-38406 | Msa1392750:CDS |
| TGAAGAGACATCACTTGGTT+TGG | 0.373109 | tig0021525:+38182 | None:intergenic |
| CAAAGTTGAACTGAATTTGA+AGG | 0.376364 | tig0021525:+40028 | None:intergenic |
| ACTAGTGACAACTCTTATTC+TGG | 0.379125 | tig0021525:-39234 | Msa1392750:CDS |
| TTTGCAACAAAGGCATGTTC+AGG | 0.382252 | tig0021525:+38594 | None:intergenic |
| CTGATTTGAACTACGACAAA+TGG | 0.386609 | tig0021525:+39308 | None:intergenic |
| GAGCTTACTGAAATGAATCT+TGG | 0.390158 | tig0021525:+39935 | None:intergenic |
| AGGAGAAAGCATGTAGAAAT+GGG | 0.398086 | tig0021525:-39428 | Msa1392750:CDS |
| GGTAGAGGTGCCATGCAAAA+TGG | 0.403175 | tig0021525:+37194 | None:intergenic |
| AGTAGGTAATGCTTTAAATT+GGG | 0.403955 | tig0021525:-38562 | Msa1392750:CDS |
| TAGTTCAAATCAGAAGAAAA+TGG | 0.416816 | tig0021525:-39298 | Msa1392750:CDS |
| TCTAGTATAGTAGAAGTAAC+AGG | 0.420129 | tig0021525:-39015 | Msa1392750:CDS |
| GGACCATTGCTTTCAGCACT+TGG | 0.422219 | tig0021525:+38111 | None:intergenic |
| TATTGTAATGAGATAATAAG+AGG | 0.423587 | tig0021525:-36612 | Msa1392750:three_prime_UTR |
| CTTCTTCCTTTCATGAATTG+TGG | 0.423987 | tig0021525:+39275 | None:intergenic |
| TCTTGTCCCATCAATAATTC+CGG | 0.426394 | tig0021525:+39534 | None:intergenic |
| TAGGACTCCGGAATTATTGA+TGG | 0.428609 | tig0021525:-39541 | Msa1392750:CDS |
| AAACAATAGCAGCACTTTCA+AGG | 0.433528 | tig0021525:+38277 | None:intergenic |
| TGGAGAAAATGTGGAGTATC+TGG | 0.438698 | tig0021525:-36667 | Msa1392750:three_prime_UTR |
| CGACTGTGGTGGCTGGGACA+TGG | 0.444536 | tig0021525:-38049 | Msa1392750:CDS |
| AGCGAAGAATAATGCAGGCT+TGG | 0.447721 | tig0021525:-38511 | Msa1392750:CDS |
| GGCAAACCATGGTTTCCAAT+TGG | 0.448117 | tig0021525:+38132 | None:intergenic |
| ATTATTGATGGGACAAGAGT+TGG | 0.452032 | tig0021525:-39529 | Msa1392750:CDS |
| ATGCAAAATGGCGACGCAAA+TGG | 0.453647 | tig0021525:+37206 | None:intergenic |
| TTGGTGTTACAAATTATCTT+GGG | 0.454142 | tig0021525:+36636 | None:intergenic |
| CTTCAGCGCTAAGGAAGAAC+AGG | 0.454329 | tig0021525:-37172 | Msa1392750:CDS |
| TCCATATTGTATGCAATTGT+TGG | 0.457862 | tig0021525:-36886 | Msa1392750:three_prime_UTR |
| GGATTGCCTAAAAGAATAAG+AGG | 0.461921 | tig0021525:+38021 | None:intergenic |
| GTAAATGTGGTATTACCAAT+TGG | 0.463627 | tig0021525:-38147 | Msa1392750:CDS |
| TTCAACTAATGTCATGCAAA+AGG | 0.463878 | tig0021525:+37284 | None:intergenic |
| TGAGATGGAAGAACAGAATT+GGG | 0.465267 | tig0021525:+39474 | None:intergenic |
| AGATTACCATGCAAATGAAC+AGG | 0.469037 | tig0021525:+38669 | None:intergenic |
| AAAGGTAGGAGCACTTTCTT+CGG | 0.471674 | tig0021525:+37302 | None:intergenic |
| GCGAAGAATAATGCAGGCTT+GGG | 0.473494 | tig0021525:-38510 | Msa1392750:CDS |
| TCCTTAGATATTACTGAAGA+AGG | 0.476269 | tig0021525:+39153 | None:intergenic |
| TGGAGTTGCAGCCTTCAATC+AGG | 0.477604 | tig0021525:+36936 | None:intergenic |
| TTATGTTCTGAATTAGAAGA+TGG | 0.478333 | tig0021525:-38426 | Msa1392750:CDS |
| CTGTTCTTCCTTAGCGCTGA+AGG | 0.479011 | tig0021525:+37173 | None:intergenic |
| GAATGAATAGTCAGCTCTCA+TGG | 0.479134 | tig0021525:-36687 | Msa1392750:three_prime_UTR |
| TGGATATGGTTGGTGAGAAT+TGG | 0.482415 | tig0021525:+38906 | None:intergenic |
| CGCTCACCTGTTCATTTGCA+TGG | 0.482795 | tig0021525:-38675 | Msa1392750:CDS |
| GATGAACAATCACTTTCTGC+TGG | 0.484536 | tig0021525:+38886 | None:intergenic |
| TTCCTTAGCGCTGAAGGTAG+AGG | 0.484557 | tig0021525:+37179 | None:intergenic |
| TTCCAACATAGCCTGATTGA+AGG | 0.485429 | tig0021525:-36947 | Msa1392750:three_prime_UTR |
| GGATGAAATTCACATCCATA+TGG | 0.486294 | tig0021525:-36827 | Msa1392750:three_prime_UTR |
| CATCCATATGGACTCCTAGC+TGG | 0.488531 | tig0021525:-36815 | Msa1392750:three_prime_UTR |
| TCTTTCTTATGACTCATAGC+TGG | 0.493201 | tig0021525:+36774 | None:intergenic |
| TTGCCAGCTAGGAGTCCATA+TGG | 0.494038 | tig0021525:+36812 | None:intergenic |
| TGACAATGATTCATCATCAA+TGG | 0.497989 | tig0021525:-38475 | Msa1392750:CDS |
| AAGCTTTCTCTCTTATGAAA+CGG | 0.499315 | tig0021525:+38246 | None:intergenic |
| AAACTGTTTGAATGTGAAGA+AGG | 0.511668 | tig0021525:-39448 | Msa1392750:CDS |
| ATAAAAGTGCCGCCAAAAGA+AGG | 0.512692 | tig0021525:+40077 | None:intergenic |
| TTGCATGACATTAGTTGAAG+AGG | 0.513032 | tig0021525:-37280 | Msa1392750:CDS |
| ATGCCTTTGTTGCAAAGACA+TGG | 0.516018 | tig0021525:-38587 | Msa1392750:CDS |
| AGGTTGCGACTGTGGTGGCT+GGG | 0.520329 | tig0021525:-38055 | Msa1392750:CDS |
| TTGCAACAAAGGCATGTTCA+GGG | 0.525799 | tig0021525:+38595 | None:intergenic |
| TCGTGAAGATCGCCCTCTTG+TGG | 0.528877 | tig0021525:-37986 | Msa1392750:CDS |
| CAGTCATAACAGAGGAGAAG+AGG | 0.532964 | tig0021525:-37074 | Msa1392750:CDS |
| CACCTCTACCTTCAGCGCTA+AGG | 0.536910 | tig0021525:-37181 | Msa1392750:CDS |
| TATTGTATGCAATTGTTGGT+AGG | 0.537280 | tig0021525:-36882 | Msa1392750:three_prime_UTR |
| ATACAATATGGACTCATAGC+TGG | 0.537713 | tig0021525:+36897 | None:intergenic |
| CTTCATCGTTACTTGATCGA+TGG | 0.538533 | tig0021525:-38089 | Msa1392750:CDS |
| ATTGATGTGAATTGCCAGCT+AGG | 0.539474 | tig0021525:+36801 | None:intergenic |
| CACTTTCTGCTGGATATGGT+TGG | 0.544380 | tig0021525:+38896 | None:intergenic |
| TCTTCACGAAATTGAACACT+AGG | 0.545067 | tig0021525:+38000 | None:intergenic |
| GCCTAAAAGAATAAGAGGGC+AGG | 0.547406 | tig0021525:+38026 | None:intergenic |
| GAAAGCTTGAAATACAAAAG+AGG | 0.552857 | tig0021525:-38231 | Msa1392750:CDS |
| AGCCTTCAATCAGGCTATGT+TGG | 0.557210 | tig0021525:+36945 | None:intergenic |
| CATGGTGGAGGTTGCGACTG+TGG | 0.566215 | tig0021525:-38063 | Msa1392750:CDS |
| GTATTACCAATTGGAAACCA+TGG | 0.570636 | tig0021525:-38138 | Msa1392750:CDS |
| CTAAATGGAAGAATCTTGCA+TGG | 0.574109 | tig0021525:+39372 | None:intergenic |
| TTAGATCTCATAAACTAGAA+GGG | 0.574614 | tig0021525:-39353 | Msa1392750:CDS |
| ACTAATGTCATGCAAAAGGT+AGG | 0.574689 | tig0021525:+37288 | None:intergenic |
| CAGCTCTCATGGAGAAAATG+TGG | 0.575275 | tig0021525:-36676 | Msa1392750:three_prime_UTR |
| ATTAGAGCGAAGAATAATGC+AGG | 0.577832 | tig0021525:-38516 | Msa1392750:CDS |
| TGTGGAGAAATATCAACCAC+TGG | 0.578630 | tig0021525:-37968 | Msa1392750:CDS |
| GGTTGATATTTCTCCACAAG+AGG | 0.580921 | tig0021525:+37973 | None:intergenic |
| AGAAGATAGAAATTTCAAGT+AGG | 0.583123 | tig0021525:-39257 | Msa1392750:CDS |
| GAAGGTAGAGACAAGAGAGA+AGG | 0.583679 | tig0021525:+40095 | None:intergenic |
| GCACAGGAACAAGAAACAGA+TGG | 0.584959 | tig0021525:+39108 | None:intergenic |
| AAGAACTAGAGCATCTTCTA+CGG | 0.584988 | tig0021525:+36742 | None:intergenic |
| AGGACTCCGGAATTATTGAT+GGG | 0.585368 | tig0021525:-39540 | Msa1392750:CDS |
| AAATGGCCACAATTCATGAA+AGG | 0.585694 | tig0021525:-39281 | Msa1392750:CDS |
| ATAGTATAATTATAGGACTC+CGG | 0.587141 | tig0021525:-39553 | Msa1392750:intron |
| ACACTTCATACCCGCCCGAT+AGG | 0.587731 | tig0021525:+36991 | None:intergenic |
| AAAAGGCGGGTTCAGCATAG+AGG | 0.592188 | tig0021525:+37017 | None:intergenic |
| GCTGTGTTCCATACAAGCAC+AGG | 0.592937 | tig0021525:+39092 | None:intergenic |
| ATTGTAATGAGATAATAAGA+GGG | 0.593877 | tig0021525:-36611 | Msa1392750:three_prime_UTR |
| ACTAGTGAAGAGACATCACT+TGG | 0.595326 | tig0021525:+38177 | None:intergenic |
| TTGTGTGGTTCAGATGATGA+AGG | 0.597591 | tig0021525:-39195 | Msa1392750:CDS |
| GTTGCAAAGACATGGAGAGT+AGG | 0.601872 | tig0021525:-38579 | Msa1392750:CDS |
| CATCGATCAAGTAACGATGA+AGG | 0.603033 | tig0021525:+38090 | None:intergenic |
| AGATGATGAAGGTTCTGTTG+AGG | 0.604425 | tig0021525:-39184 | Msa1392750:CDS |
| TTTCAGCACTTGGCAAACCA+TGG | 0.608452 | tig0021525:+38121 | None:intergenic |
| TTACTTGATCGATGGAAACA+TGG | 0.608456 | tig0021525:-38081 | Msa1392750:CDS |
| TCTCCATGTCTTTGCAACAA+AGG | 0.610158 | tig0021525:+38584 | None:intergenic |
| TGCAACAAAGGCATGTTCAG+GGG | 0.610690 | tig0021525:+38596 | None:intergenic |
| ACTAGTAGAGCAAGTAAATG+TGG | 0.623840 | tig0021525:-38160 | Msa1392750:CDS |
| GATTGCCTAAAAGAATAAGA+GGG | 0.636194 | tig0021525:+38022 | None:intergenic |
| GTTGATATTTCTCCACAAGA+GGG | 0.637606 | tig0021525:+37974 | None:intergenic |
| GACAGTGTCTAATATTCACA+AGG | 0.640826 | tig0021525:-37052 | Msa1392750:CDS |
| GGCTGAGAGAAAAGTTCCAG+TGG | 0.651763 | tig0021525:+37952 | None:intergenic |
| TAGAAATGGGAAATTCAAAG+AGG | 0.661488 | tig0021525:-39415 | Msa1392750:CDS |
| GGTAAGAAGTGAACATGGTG+AGG | 0.674527 | tig0021525:-36848 | Msa1392750:three_prime_UTR |
| GGTGGAGGTTGCGACTGTGG+TGG | 0.681780 | tig0021525:-38060 | Msa1392750:CDS |
| GATCGATGGAAACATGGTGG+AGG | 0.686983 | tig0021525:-38075 | Msa1392750:CDS |
| CTTGATCGATGGAAACATGG+TGG | 0.691146 | tig0021525:-38078 | Msa1392750:CDS |
| CATCAAATCAGTCATAACAG+AGG | 0.691271 | tig0021525:-37082 | Msa1392750:CDS |
| TTGCCAAGTGCTGAAAGCAA+TGG | 0.693247 | tig0021525:-38114 | Msa1392750:CDS |
| ACAGTGTCTAATATTCACAA+GGG | 0.748410 | tig0021525:-37051 | Msa1392750:CDS |
| AATTTGGTAAGAAGTGAACA+TGG | 0.753223 | tig0021525:-36853 | Msa1392750:three_prime_UTR |
| AGAAAATGTGGAGTATCTGG+TGG | 0.762271 | tig0021525:-36664 | Msa1392750:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAATAGTAAAAAAAAAG+AGG | + | tig0021525:37136-37155 | None:intergenic | 15.0% |
| !! | TAGAAAAAAAACAATTAAAG+AGG | + | tig0021525:39363-39382 | None:intergenic | 15.0% |
| !!! | ACTTACATTTTATCTATTTT+TGG | - | tig0021525:39385-39404 | Msa1392750:CDS | 15.0% |
| !! | TATTATCTCATTACAATATT+TGG | + | tig0021525:40107-40126 | None:intergenic | 15.0% |
| !! | AAACAGAAAAATAAAAATGC+TGG | + | tig0021525:36956-36975 | None:intergenic | 20.0% |
| !! | TTCAAAGATTAGAAGTAATA+AGG | - | tig0021525:37738-37757 | Msa1392750:intron | 20.0% |
| !! | ATTTGTCAATAGAGAAATTA+AGG | - | tig0021525:38009-38028 | Msa1392750:CDS | 20.0% |
| !! | TTTACCTTAAACTCAAAATA+AGG | + | tig0021525:38103-38122 | None:intergenic | 20.0% |
| !! | TTCTTATTAAATTTGAGAAC+TGG | + | tig0021525:38858-38877 | None:intergenic | 20.0% |
| !!! | TGCAATTGTTTTATAAAATG+TGG | + | tig0021525:39110-39129 | None:intergenic | 20.0% |
| !!! | TTTTGTTGAATACAAATAAC+AGG | + | tig0021525:39204-39223 | None:intergenic | 20.0% |
| !! | TATTGTAATGAGATAATAAG+AGG | - | tig0021525:40109-40128 | Msa1392750:five_prime_UTR | 20.0% |
| !! | ATTGTAATGAGATAATAAGA+GGG | - | tig0021525:40110-40129 | Msa1392750:five_prime_UTR | 20.0% |
| ! | AAAAAAGAGGAAAAAGGAAA+AGG | + | tig0021525:36822-36841 | None:intergenic | 25.0% |
| ! | TCCTGAATATAGTATATCAT+AGG | - | tig0021525:36987-37006 | Msa1392750:exon | 25.0% |
| ! | ACCTATGATATACTATATTC+AGG | + | tig0021525:36991-37010 | None:intergenic | 25.0% |
| ! | ATAGTATAATTATAGGACTC+CGG | - | tig0021525:37168-37187 | Msa1392750:CDS | 25.0% |
| !! | TCTAGTTTATGAGATCTAAA+TGG | + | tig0021525:37367-37386 | None:intergenic | 25.0% |
| ! | TTTAGATCTCATAAACTAGA+AGG | - | tig0021525:37367-37386 | Msa1392750:intron | 25.0% |
| ! | TTAGATCTCATAAACTAGAA+GGG | - | tig0021525:37368-37387 | Msa1392750:intron | 25.0% |
| ! | TAGTTCAAATCAGAAGAAAA+TGG | - | tig0021525:37423-37442 | Msa1392750:intron | 25.0% |
| !! | AGAAGATAGAAATTTCAAGT+AGG | - | tig0021525:37464-37483 | Msa1392750:intron | 25.0% |
| ! | ATTGAATTGTGCATAAATTC+AGG | - | tig0021525:37667-37686 | Msa1392750:intron | 25.0% |
| ! | GTTAATGATTCTCTTGTAAT+TGG | - | tig0021525:37760-37779 | Msa1392750:intron | 25.0% |
| ! | TAATTCTCCTCTTAAAAAAG+TGG | - | tig0021525:37786-37805 | Msa1392750:intron | 25.0% |
| !!! | CTTTTTTTTGACTTTGTGAA+GGG | + | tig0021525:37910-37929 | None:intergenic | 25.0% |
| !!! | ACTTTTTTTTGACTTTGTGA+AGG | + | tig0021525:37911-37930 | None:intergenic | 25.0% |
| ! | AAAAAAAGTTGCAAGAAACA+TGG | - | tig0021525:37922-37941 | Msa1392750:intron | 25.0% |
| !!! | ACATCCTTATTTTGAGTTTA+AGG | - | tig0021525:38096-38115 | Msa1392750:CDS | 25.0% |
| !! | AGTAGGTAATGCTTTAAATT+GGG | - | tig0021525:38159-38178 | Msa1392750:CDS | 25.0% |
| !! | TTATGTTCTGAATTAGAAGA+TGG | - | tig0021525:38295-38314 | Msa1392750:CDS | 25.0% |
| !!! | TTGTTGTAAGACTTTTTCTT+TGG | + | tig0021525:38391-38410 | None:intergenic | 25.0% |
| ! | TGAAATTTAATCTTTACCTG+AGG | + | tig0021525:38793-38812 | None:intergenic | 25.0% |
| ! | TCATATAAAGTCTTTCTTGA+AGG | - | tig0021525:38810-38829 | Msa1392750:intron | 25.0% |
| ! | ATTATGACGATTTAATCGAT+TGG | + | tig0021525:39052-39071 | None:intergenic | 25.0% |
| !!! | TACAACAATGTGTTTTTGAT+TGG | - | tig0021525:39288-39307 | Msa1392750:CDS | 25.0% |
| !! | GTAATGAAGATAATTTTGCA+TGG | + | tig0021525:39486-39505 | None:intergenic | 25.0% |
| !!! | TTGGTGTTACAAATTATCTT+GGG | + | tig0021525:40088-40107 | None:intergenic | 25.0% |
| !!! | TTTGGTGTTACAAATTATCT+TGG | + | tig0021525:40089-40108 | None:intergenic | 25.0% |
| CAAAGTTGAACTGAATTTGA+AGG | + | tig0021525:36696-36715 | None:intergenic | 30.0% | |
| ACAGTGAAAAAAGAGGAAAA+AGG | + | tig0021525:36828-36847 | None:intergenic | 30.0% | |
| CGTAATAACAGTGAAAAAAG+AGG | + | tig0021525:36835-36854 | None:intergenic | 30.0% | |
| ! | ATGTAACGCAGATATGTTTT+TGG | + | tig0021525:36926-36945 | None:intergenic | 30.0% |
| !! | TTCAAACAGTTTTGATGAGA+TGG | + | tig0021525:37265-37284 | None:intergenic | 30.0% |
| AAACTGTTTGAATGTGAAGA+AGG | - | tig0021525:37273-37292 | Msa1392750:CDS | 30.0% | |
| TAGAAATGGGAAATTCAAAG+AGG | - | tig0021525:37306-37325 | Msa1392750:CDS | 30.0% | |
| !!! | AGCATTTTTTATGCATTGTG+TGG | - | tig0021525:37511-37530 | Msa1392750:intron | 30.0% |
| ACCTTCTTCAGTAATATCTA+AGG | - | tig0021525:37567-37586 | Msa1392750:intron | 30.0% | |
| TCCTTAGATATTACTGAAGA+AGG | + | tig0021525:37571-37590 | None:intergenic | 30.0% | |
| TCTAGTATAGTAGAAGTAAC+AGG | - | tig0021525:37706-37725 | Msa1392750:intron | 30.0% | |
| !!! | GAGATTTCCACTTTTTTAAG+AGG | + | tig0021525:37796-37815 | None:intergenic | 30.0% |
| ! | TTTTTCTGATTGGAGTGAAT+GGG | + | tig0021525:37879-37898 | None:intergenic | 30.0% |
| !! | CTCAAGTTGAAAAACAAACA+AGG | - | tig0021525:38073-38092 | Msa1392750:CDS | 30.0% |
| ! | GAGTAGGTAATGCTTTAAAT+TGG | - | tig0021525:38158-38177 | Msa1392750:CDS | 30.0% |
| TGACAATGATTCATCATCAA+TGG | - | tig0021525:38246-38265 | Msa1392750:CDS | 30.0% | |
| ! | GAATTAGAAGATGGAGTATT+TGG | - | tig0021525:38304-38323 | Msa1392750:CDS | 30.0% |
| ! | TGGAGTATTTGGAAACTATA+TGG | - | tig0021525:38315-38334 | Msa1392750:CDS | 30.0% |
| ! | CTTTGGTATTACAGTTTTTC+TGG | + | tig0021525:38374-38393 | None:intergenic | 30.0% |
| AAGCTTTCTCTCTTATGAAA+CGG | + | tig0021525:38478-38497 | None:intergenic | 30.0% | |
| GAAAGCTTGAAATACAAAAG+AGG | - | tig0021525:38490-38509 | Msa1392750:CDS | 30.0% | |
| GTAAATGTGGTATTACCAAT+TGG | - | tig0021525:38574-38593 | Msa1392750:CDS | 30.0% | |
| GATTGCCTAAAAGAATAAGA+GGG | + | tig0021525:38702-38721 | None:intergenic | 30.0% | |
| ATCGTGAAAAAATCAGTACA+GGG | + | tig0021525:38998-39017 | None:intergenic | 30.0% | |
| AATCGTGAAAAAATCAGTAC+AGG | + | tig0021525:38999-39018 | None:intergenic | 30.0% | |
| ! | TCACGATTTAAAAGCATGTT+TGG | - | tig0021525:39011-39030 | Msa1392750:CDS | 30.0% |
| GAACATTCTTCAAACTAACT+AGG | - | tig0021525:39169-39188 | Msa1392750:CDS | 30.0% | |
| ! | TTGAAGTTAGTTAGCCTAAT+TGG | - | tig0021525:39225-39244 | Msa1392750:CDS | 30.0% |
| !! | CATTCAGTTTTTCAGTAACA+TGG | - | tig0021525:39325-39344 | Msa1392750:CDS | 30.0% |
| !!! | TTTATCTATTTTTGGTGCAC+AGG | - | tig0021525:39393-39412 | Msa1392750:CDS | 30.0% |
| !!! | TTATCTATTTTTGGTGCACA+GGG | - | tig0021525:39394-39413 | Msa1392750:CDS | 30.0% |
| TTCAACTAATGTCATGCAAA+AGG | + | tig0021525:39440-39459 | None:intergenic | 30.0% | |
| ACAGTGTCTAATATTCACAA+GGG | - | tig0021525:39670-39689 | Msa1392750:intron | 30.0% | |
| TCCATATTGTATGCAATTGT+TGG | - | tig0021525:39835-39854 | Msa1392750:intron | 30.0% | |
| ACCAACAATTGCATACAATA+TGG | + | tig0021525:39839-39858 | None:intergenic | 30.0% | |
| TATTGTATGCAATTGTTGGT+AGG | - | tig0021525:39839-39858 | Msa1392750:intron | 30.0% | |
| TTCACTTCTTACCAAATTTC+AGG | + | tig0021525:39866-39885 | None:intergenic | 30.0% | |
| AATTTGGTAAGAAGTGAACA+TGG | - | tig0021525:39868-39887 | Msa1392750:intron | 30.0% | |
| GCACTGTATATGTTCAAATA+AGG | + | tig0021525:40005-40024 | None:intergenic | 30.0% | |
| GAGCTTACTGAAATGAATCT+TGG | + | tig0021525:36789-36808 | None:intergenic | 35.0% | |
| GAGGAAAAAGGAAAAGGAAA+AGG | + | tig0021525:36816-36835 | None:intergenic | 35.0% | |
| TCTTGTCCCATCAATAATTC+CGG | + | tig0021525:37190-37209 | None:intergenic | 35.0% | |
| ATTATTGATGGGACAAGAGT+TGG | - | tig0021525:37192-37211 | Msa1392750:CDS | 35.0% | |
| TGAGATGGAAGAACAGAATT+GGG | + | tig0021525:37250-37269 | None:intergenic | 35.0% | |
| ATGAGATGGAAGAACAGAAT+TGG | + | tig0021525:37251-37270 | None:intergenic | 35.0% | |
| ! | AAGGAGAAAGCATGTAGAAA+TGG | - | tig0021525:37292-37311 | Msa1392750:CDS | 35.0% |
| ! | AGGAGAAAGCATGTAGAAAT+GGG | - | tig0021525:37293-37312 | Msa1392750:CDS | 35.0% |
| CTAAATGGAAGAATCTTGCA+TGG | + | tig0021525:37352-37371 | None:intergenic | 35.0% | |
| ! | CTGATTTGAACTACGACAAA+TGG | + | tig0021525:37416-37435 | None:intergenic | 35.0% |
| AAATGGCCACAATTCATGAA+AGG | - | tig0021525:37440-37459 | Msa1392750:intron | 35.0% | |
| CTTCTTCCTTTCATGAATTG+TGG | + | tig0021525:37449-37468 | None:intergenic | 35.0% | |
| ACTAGTGACAACTCTTATTC+TGG | - | tig0021525:37487-37506 | Msa1392750:intron | 35.0% | |
| ! | CTTTTTCTGATTGGAGTGAA+TGG | + | tig0021525:37880-37899 | None:intergenic | 35.0% |
| CATTCACTCCAATCAGAAAA+AGG | - | tig0021525:37878-37897 | Msa1392750:intron | 35.0% | |
| !! | GGATTTAGCCTTTTTCTGAT+TGG | + | tig0021525:37889-37908 | None:intergenic | 35.0% |
| AGATTACCATGCAAATGAAC+AGG | + | tig0021525:38055-38074 | None:intergenic | 35.0% | |
| ATTAGAGCGAAGAATAATGC+AGG | - | tig0021525:38205-38224 | Msa1392750:CDS | 35.0% | |
| AAACAATAGCAGCACTTTCA+AGG | + | tig0021525:38447-38466 | None:intergenic | 35.0% | |
| ACTAGTAGAGCAAGTAAATG+TGG | - | tig0021525:38561-38580 | Msa1392750:CDS | 35.0% | |
| GTATTACCAATTGGAAACCA+TGG | - | tig0021525:38583-38602 | Msa1392750:CDS | 35.0% | |
| TTACTTGATCGATGGAAACA+TGG | - | tig0021525:38640-38659 | Msa1392750:CDS | 35.0% | |
| GGATTGCCTAAAAGAATAAG+AGG | + | tig0021525:38703-38722 | None:intergenic | 35.0% | |
| TCTTCACGAAATTGAACACT+AGG | + | tig0021525:38724-38743 | None:intergenic | 35.0% | |
| GTTGATATTTCTCCACAAGA+GGG | + | tig0021525:38750-38769 | None:intergenic | 35.0% | |
| CTTTCTTGAAGGAACTTAGA+TGG | - | tig0021525:38821-38840 | Msa1392750:intron | 35.0% | |
| TATTCTTAAATGCGCGTTCA+TGG | + | tig0021525:38957-38976 | None:intergenic | 35.0% | |
| GAAGAATGTTCTAACTACTG+CGG | + | tig0021525:39160-39179 | None:intergenic | 35.0% | |
| ATCCTATGTAGTATGTACAC+AGG | + | tig0021525:39261-39280 | None:intergenic | 35.0% | |
| ACTAATGTCATGCAAAAGGT+AGG | + | tig0021525:39436-39455 | None:intergenic | 35.0% | |
| TTGCATGACATTAGTTGAAG+AGG | - | tig0021525:39441-39460 | Msa1392750:CDS | 35.0% | |
| CATCAAATCAGTCATAACAG+AGG | - | tig0021525:39639-39658 | Msa1392750:intron | 35.0% | |
| GACAGTGTCTAATATTCACA+AGG | - | tig0021525:39669-39688 | Msa1392750:intron | 35.0% | |
| ! | CTGGCAATAAATATTTTCGC+TGG | + | tig0021525:39808-39827 | None:intergenic | 35.0% |
| ATACAATATGGACTCATAGC+TGG | + | tig0021525:39827-39846 | None:intergenic | 35.0% | |
| GGATGAAATTCACATCCATA+TGG | - | tig0021525:39894-39913 | Msa1392750:intron | 35.0% | |
| TCTTTCTTATGACTCATAGC+TGG | + | tig0021525:39950-39969 | None:intergenic | 35.0% | |
| ! | AAGAACTAGAGCATCTTCTA+CGG | + | tig0021525:39982-40001 | None:intergenic | 35.0% |
| ! | CTCTTGTCTCTACCTTCTTT+TGG | - | tig0021525:36632-36651 | Msa1392750:three_prime_UTR | 40.0% |
| ! | TTGTCTCTACCTTCTTTTGG+CGG | - | tig0021525:36635-36654 | Msa1392750:three_prime_UTR | 40.0% |
| !! | ATAAAAGTGCCGCCAAAAGA+AGG | + | tig0021525:36647-36666 | None:intergenic | 40.0% |
| TAGGACTCCGGAATTATTGA+TGG | - | tig0021525:37180-37199 | Msa1392750:CDS | 40.0% | |
| AGGACTCCGGAATTATTGAT+GGG | - | tig0021525:37181-37200 | Msa1392750:CDS | 40.0% | |
| TTGTGTGGTTCAGATGATGA+AGG | - | tig0021525:37526-37545 | Msa1392750:intron | 40.0% | |
| AGATGATGAAGGTTCTGTTG+AGG | - | tig0021525:37537-37556 | Msa1392750:intron | 40.0% | |
| TTCTTGTTCCTGTGCTTGTA+TGG | - | tig0021525:37621-37640 | Msa1392750:intron | 40.0% | |
| !! | TGGATATGGTTGGTGAGAAT+TGG | + | tig0021525:37818-37837 | None:intergenic | 40.0% |
| CAATCACTTTCTGCTGGATA+TGG | + | tig0021525:37832-37851 | None:intergenic | 40.0% | |
| GATGAACAATCACTTTCTGC+TGG | + | tig0021525:37838-37857 | None:intergenic | 40.0% | |
| !! | GTCAGCATCTTTTGTTGTGT+TGG | + | tig0021525:37978-37997 | None:intergenic | 40.0% |
| ! | TTGCAACAAAGGCATGTTCA+GGG | + | tig0021525:38129-38148 | None:intergenic | 40.0% |
| ! | TTTGCAACAAAGGCATGTTC+AGG | + | tig0021525:38130-38149 | None:intergenic | 40.0% |
| ATGCCTTTGTTGCAAAGACA+TGG | - | tig0021525:38134-38153 | Msa1392750:CDS | 40.0% | |
| TCTCCATGTCTTTGCAACAA+AGG | + | tig0021525:38140-38159 | None:intergenic | 40.0% | |
| TGAAGAGACATCACTTGGTT+TGG | + | tig0021525:38542-38561 | None:intergenic | 40.0% | |
| ACTAGTGAAGAGACATCACT+TGG | + | tig0021525:38547-38566 | None:intergenic | 40.0% | |
| CATCGATCAAGTAACGATGA+AGG | + | tig0021525:38634-38653 | None:intergenic | 40.0% | |
| CTTCATCGTTACTTGATCGA+TGG | - | tig0021525:38632-38651 | Msa1392750:CDS | 40.0% | |
| ! | GGTTGATATTTCTCCACAAG+AGG | + | tig0021525:38751-38770 | None:intergenic | 40.0% |
| TGTGGAGAAATATCAACCAC+TGG | - | tig0021525:38753-38772 | Msa1392750:intron | 40.0% | |
| CTCCTGTGTACATACTACAT+AGG | - | tig0021525:39256-39275 | Msa1392750:CDS | 40.0% | |
| !! | AAAGGTAGGAGCACTTTCTT+CGG | + | tig0021525:39422-39441 | None:intergenic | 40.0% |
| TTCCAACATAGCCTGATTGA+AGG | - | tig0021525:39774-39793 | Msa1392750:intron | 40.0% | |
| ! | TGTTGGTAGGACCTGAAATT+TGG | - | tig0021525:39852-39871 | Msa1392750:intron | 40.0% |
| ATTGATGTGAATTGCCAGCT+AGG | + | tig0021525:39923-39942 | None:intergenic | 40.0% | |
| GAATGAATAGTCAGCTCTCA+TGG | - | tig0021525:40034-40053 | Msa1392750:five_prime_UTR | 40.0% | |
| ! | TGGAGAAAATGTGGAGTATC+TGG | - | tig0021525:40054-40073 | Msa1392750:five_prime_UTR | 40.0% |
| ! | AGAAAATGTGGAGTATCTGG+TGG | - | tig0021525:40057-40076 | Msa1392750:five_prime_UTR | 40.0% |
| GAAGGTAGAGACAAGAGAGA+AGG | + | tig0021525:36629-36648 | None:intergenic | 45.0% | |
| GCACAGGAACAAGAAACAGA+TGG | + | tig0021525:37616-37635 | None:intergenic | 45.0% | |
| CACTTTCTGCTGGATATGGT+TGG | + | tig0021525:37828-37847 | None:intergenic | 45.0% | |
| ! | TGCAACAAAGGCATGTTCAG+GGG | + | tig0021525:38128-38147 | None:intergenic | 45.0% |
| GTTGCAAAGACATGGAGAGT+AGG | - | tig0021525:38142-38161 | Msa1392750:CDS | 45.0% | |
| AGCGAAGAATAATGCAGGCT+TGG | - | tig0021525:38210-38229 | Msa1392750:CDS | 45.0% | |
| GCGAAGAATAATGCAGGCTT+GGG | - | tig0021525:38211-38230 | Msa1392750:CDS | 45.0% | |
| GGCAAACCATGGTTTCCAAT+TGG | + | tig0021525:38592-38611 | None:intergenic | 45.0% | |
| TTTCAGCACTTGGCAAACCA+TGG | + | tig0021525:38603-38622 | None:intergenic | 45.0% | |
| !! | TTGCCAAGTGCTGAAAGCAA+TGG | - | tig0021525:38607-38626 | Msa1392750:CDS | 45.0% |
| CTTGATCGATGGAAACATGG+TGG | - | tig0021525:38643-38662 | Msa1392750:CDS | 45.0% | |
| ! | GCCTGCCCTCTTATTCTTTT+AGG | - | tig0021525:38694-38713 | Msa1392750:CDS | 45.0% |
| GCCTAAAAGAATAAGAGGGC+AGG | + | tig0021525:38698-38717 | None:intergenic | 45.0% | |
| GCGCGTTCATGGTATTTGAT+AGG | + | tig0021525:38946-38965 | None:intergenic | 45.0% | |
| !! | ATCCAGTCAGCGCTGAATTT+TGG | - | tig0021525:39132-39151 | Msa1392750:CDS | 45.0% |
| !! | TTCCAAAATTCAGCGCTGAC+TGG | + | tig0021525:39137-39156 | None:intergenic | 45.0% |
| !! | CAGGAGCTTGTTGTCCAATT+AGG | + | tig0021525:39242-39261 | None:intergenic | 45.0% |
| ATGCAAAATGGCGACGCAAA+TGG | + | tig0021525:39518-39537 | None:intergenic | 45.0% | |
| !! | ATTTGCGTCGCCATTTTGCA+TGG | - | tig0021525:39517-39536 | Msa1392750:CDS | 45.0% |
| CAGTCATAACAGAGGAGAAG+AGG | - | tig0021525:39647-39666 | Msa1392750:intron | 45.0% | |
| ! | AACCCGCCTTTTTCTCCTAT+CGG | - | tig0021525:39715-39734 | Msa1392750:intron | 45.0% |
| AGCCTTCAATCAGGCTATGT+TGG | + | tig0021525:39779-39798 | None:intergenic | 45.0% | |
| GGTAAGAAGTGAACATGGTG+AGG | - | tig0021525:39873-39892 | Msa1392750:intron | 45.0% | |
| CAGCTCTCATGGAGAAAATG+TGG | - | tig0021525:40045-40064 | Msa1392750:five_prime_UTR | 45.0% | |
| !! | ATAATTATACTATTATATAA+AGG | + | tig0021525:37161-37180 | None:intergenic | 5.0% |
| !! | TTATATAATAGTATAATTAT+AGG | - | tig0021525:37161-37180 | Msa1392750:CDS | 5.0% |
| GCTGTGTTCCATACAAGCAC+AGG | + | tig0021525:37632-37651 | None:intergenic | 50.0% | |
| CGCTCACCTGTTCATTTGCA+TGG | - | tig0021525:38046-38065 | Msa1392750:CDS | 50.0% | |
| GGACCATTGCTTTCAGCACT+TGG | + | tig0021525:38613-38632 | None:intergenic | 50.0% | |
| GATCGATGGAAACATGGTGG+AGG | - | tig0021525:38646-38665 | Msa1392750:CDS | 50.0% | |
| GGCTGAGAGAAAAGTTCCAG+TGG | + | tig0021525:38772-38791 | None:intergenic | 50.0% | |
| ! | GGAACTTTTCTCTCAGCCTC+AGG | - | tig0021525:38774-38793 | Msa1392750:intron | 50.0% |
| !! | GGTAGAGGTGCCATGCAAAA+TGG | + | tig0021525:39530-39549 | None:intergenic | 50.0% |
| ! | TTCCTTAGCGCTGAAGGTAG+AGG | + | tig0021525:39545-39564 | None:intergenic | 50.0% |
| ! | CTGTTCTTCCTTAGCGCTGA+AGG | + | tig0021525:39551-39570 | None:intergenic | 50.0% |
| CTTCAGCGCTAAGGAAGAAC+AGG | - | tig0021525:39549-39568 | Msa1392750:intron | 50.0% | |
| ! | AAAAGGCGGGTTCAGCATAG+AGG | + | tig0021525:39707-39726 | None:intergenic | 50.0% |
| ! | ACCCGCCTTTTTCTCCTATC+GGG | - | tig0021525:39716-39735 | Msa1392750:intron | 50.0% |
| TGGAGTTGCAGCCTTCAATC+AGG | + | tig0021525:39788-39807 | None:intergenic | 50.0% | |
| CATCCATATGGACTCCTAGC+TGG | - | tig0021525:39906-39925 | Msa1392750:intron | 50.0% | |
| TTGCCAGCTAGGAGTCCATA+TGG | + | tig0021525:39912-39931 | None:intergenic | 50.0% | |
| TCGTGAAGATCGCCCTCTTG+TGG | - | tig0021525:38735-38754 | Msa1392750:intron | 55.0% | |
| CACCTCTACCTTCAGCGCTA+AGG | - | tig0021525:39540-39559 | Msa1392750:CDS | 55.0% | |
| GCCCGATAGGAGAAAAAGGC+GGG | + | tig0021525:39720-39739 | None:intergenic | 55.0% | |
| CGCCCGATAGGAGAAAAAGG+CGG | + | tig0021525:39721-39740 | None:intergenic | 55.0% | |
| ! | CGCCTTTTTCTCCTATCGGG+CGG | - | tig0021525:39719-39738 | Msa1392750:intron | 55.0% |
| ! | GCCTTTTTCTCCTATCGGGC+GGG | - | tig0021525:39720-39739 | Msa1392750:intron | 55.0% |
| ACCCGCCCGATAGGAGAAAA+AGG | + | tig0021525:39724-39743 | None:intergenic | 55.0% | |
| ACACTTCATACCCGCCCGAT+AGG | + | tig0021525:39733-39752 | None:intergenic | 55.0% | |
| ! | CATGGTGGAGGTTGCGACTG+TGG | - | tig0021525:38658-38677 | Msa1392750:CDS | 60.0% |
| AGGTTGCGACTGTGGTGGCT+GGG | - | tig0021525:38666-38685 | Msa1392750:CDS | 60.0% | |
| GGTGGAGGTTGCGACTGTGG+TGG | - | tig0021525:38661-38680 | Msa1392750:CDS | 65.0% | |
| GAGGTTGCGACTGTGGTGGC+TGG | - | tig0021525:38665-38684 | Msa1392750:CDS | 65.0% | |
| CGACTGTGGTGGCTGGGACA+TGG | - | tig0021525:38672-38691 | Msa1392750:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021525 | gene | 36593 | 40150 | 36593 | ID=Msa1392750;Name=Msa1392750 |
| tig0021525 | mRNA | 36593 | 40150 | 36593 | ID=Msa1392750-mRNA-1;Parent=Msa1392750;Name=Msa1392750-mRNA-1;_AED=0.26;_eAED=0.26;_QI=137|0.66|0.5|1|0.66|0.5|4|403|630 |
| tig0021525 | exon | 36593 | 37328 | 36593 | ID=Msa1392750-mRNA-1:exon:13456;Parent=Msa1392750-mRNA-1 |
| tig0021525 | exon | 37948 | 38753 | 37948 | ID=Msa1392750-mRNA-1:exon:13455;Parent=Msa1392750-mRNA-1 |
| tig0021525 | exon | 38878 | 39560 | 38878 | ID=Msa1392750-mRNA-1:exon:13454;Parent=Msa1392750-mRNA-1 |
| tig0021525 | exon | 39943 | 40150 | 39943 | ID=Msa1392750-mRNA-1:exon:13453;Parent=Msa1392750-mRNA-1 |
| tig0021525 | five_prime_UTR | 40014 | 40150 | 40014 | ID=Msa1392750-mRNA-1:five_prime_utr;Parent=Msa1392750-mRNA-1 |
| tig0021525 | CDS | 39943 | 40013 | 39943 | ID=Msa1392750-mRNA-1:cds;Parent=Msa1392750-mRNA-1 |
| tig0021525 | CDS | 38878 | 39560 | 38878 | ID=Msa1392750-mRNA-1:cds;Parent=Msa1392750-mRNA-1 |
| tig0021525 | CDS | 37948 | 38753 | 37948 | ID=Msa1392750-mRNA-1:cds;Parent=Msa1392750-mRNA-1 |
| tig0021525 | CDS | 36996 | 37328 | 36996 | ID=Msa1392750-mRNA-1:cds;Parent=Msa1392750-mRNA-1 |
| tig0021525 | three_prime_UTR | 36593 | 36995 | 36593 | ID=Msa1392750-mRNA-1:three_prime_utr;Parent=Msa1392750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
