AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1396700

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1396700 MtrunA17_Chr4g0059361 97.340 188 4 1 1 188 1 187 2.69e-134 373
Msa1396700 MtrunA17_Chr3g0117971 54.974 191 75 3 1 188 1 183 2.41e-63 193
Msa1396700 MtrunA17_Chr5g0414281 42.328 189 87 4 1 186 1 170 6.96e-40 133
Msa1396700 MtrunA17_Chr4g0054191 38.624 189 94 4 1 188 1 168 6.40e-35 120
Msa1396700 MtrunA17_Chr8g0364591 38.378 185 99 4 1 185 1 170 4.13e-30 108
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1396700 AT5G62900.1 46.809 188 73 4 1 188 1 161 9.32e-48 153
Msa1396700 AT5G50090.1 44.444 189 73 4 1 188 1 158 6.64e-42 139
Msa1396700 AT5G50090.2 46.277 188 65 5 1 188 1 152 2.77e-41 137
Msa1396700 AT1G60010.1 41.489 188 95 4 1 188 1 173 1.26e-40 135
Msa1396700 AT5G50090.3 52.500 120 43 1 1 120 1 106 1.13e-35 122
Msa1396700 AT1G10530.1 35.638 188 99 3 1 188 1 166 8.72e-35 120
Msa1396700 AT5G67620.1 32.195 205 98 7 1 188 1 181 1.06e-23 92.8

Find 109 sgRNAs with CRISPR-Local

Find 316 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTATTAATCACTTTAAATT+TGG 0.165381 tig0022059:+84026 Msa1396700:three_prime_UTR
GAAGGAGAAGTAGTTGAAAA+AGG 0.168731 tig0022059:-84269 Msa1396710:CDS
TAAGGGCAAAATTCTTAATT+AGG 0.175331 tig0022059:-84050 None:intergenic
TGCATTTCATCCCTGTAATT+AGG 0.175438 tig0022059:+83949 Msa1396700:three_prime_UTR
ATCTGTGGGAAATTAAATTA+AGG 0.228969 tig0022059:+83918 Msa1396700:three_prime_UTR
GTTTCGTCTTCTCATGTTTC+CGG 0.232857 tig0022059:+84646 Msa1396700:three_prime_UTR
ACTTGTTGGGATTTAGAAAT+TGG 0.236727 tig0022059:+84756 Msa1396700:three_prime_UTR
GCATTTCATCCCTGTAATTA+GGG 0.241125 tig0022059:+83950 Msa1396700:three_prime_UTR
TTAAAGTGATTAATAATTAC+AGG 0.275595 tig0022059:-84020 None:intergenic
CCTCCTTCACTTCACTTCTC+TGG 0.278732 tig0022059:+84144 Msa1396700:three_prime_UTR
ACGTGTCTCAGATTTCATTA+AGG 0.285739 tig0022059:-84068 None:intergenic
GAGGAAGGATATAAATAATA+AGG 0.287758 tig0022059:-82662 None:intergenic
GACGATTTCGATTCTGATTC+CGG 0.302020 tig0022059:+84587 Msa1396700:three_prime_UTR
AACCTTTCTTCTTTGCCATT+TGG 0.302263 tig0022059:-82763 None:intergenic
ACAAAAGTCAAATCAGATTA+AGG 0.303462 tig0022059:+83212 Msa1396700:CDS
TTCCACCGCCGGAGGTTGTT+GGG 0.305016 tig0022059:-84525 Msa1396710:intron
TTCAAATGACCCCTAATTAC+AGG 0.309823 tig0022059:-83960 None:intergenic
AATGACCCAAATGCAAAATA+TGG 0.311728 tig0022059:-84712 Msa1396710:CDS
TAATAATTACAGGGATGAAA+TGG 0.325643 tig0022059:-84010 None:intergenic
CGTGTCTCAGATTTCATTAA+GGG 0.327473 tig0022059:-84067 None:intergenic
TTTCCACCGCCGGAGGTTGT+TGG 0.355496 tig0022059:-84526 Msa1396710:intron
AGATTTACCTTGTTATCTTC+AGG 0.363890 tig0022059:-83270 None:intergenic
ACATTGGAAAATTCTAGTTC+AGG 0.365363 tig0022059:-84352 Msa1396710:intron
CGGCACGGTGGCGGCGGTGG+TGG 0.368020 tig0022059:+84666 Msa1396700:three_prime_UTR
TTAATGATAAAACAGCTAAT+AGG 0.376595 tig0022059:+83241 Msa1396700:CDS
GGTGGCGGCGGTGGTGGTGA+TGG 0.390206 tig0022059:+84672 Msa1396700:three_prime_UTR
TTCCGGCACGGTGGCGGCGG+TGG 0.401783 tig0022059:+84663 Msa1396700:three_prime_UTR
ATCACTTCACTAGCAGTAAC+TGG 0.406024 tig0022059:-82793 None:intergenic
ATTGTTTCTTGTGTCAAGTA+AGG 0.406562 tig0022059:+84732 Msa1396700:three_prime_UTR
CGGTCGGCGGTTTCCACCGC+CGG 0.413698 tig0022059:-84536 Msa1396710:CDS
ACAACAACAACGTCATCTTC+TGG 0.415357 tig0022059:+84380 Msa1396700:three_prime_UTR
AGAAGAGCAACATAGTGATC+AGG 0.427746 tig0022059:-82826 None:intergenic
AATAATTACAGGGATGAAAT+GGG 0.438337 tig0022059:-84009 None:intergenic
CATTGGAAAATTCTAGTTCA+GGG 0.442928 tig0022059:-84351 Msa1396710:intron
CAACAACAACGTCATCTTCT+GGG 0.443210 tig0022059:+84381 Msa1396700:three_prime_UTR
TCTGTGGGAAATTAAATTAA+GGG 0.443932 tig0022059:+83919 Msa1396700:three_prime_UTR
CTACAAGTAAGTGAAGGATC+AGG 0.455787 tig0022059:-84624 Msa1396710:CDS
CAGAGGTTACAAAGGGTATG+TGG 0.456771 tig0022059:+83142 Msa1396700:intron
TCATGTTTCCGGCACGGTGG+CGG 0.467660 tig0022059:+84657 Msa1396700:three_prime_UTR
AGATGAACATAGGGGTAGAC+AGG 0.468639 tig0022059:-84108 None:intergenic
TTCAGTGATGCTTTGTAAAG+AGG 0.477664 tig0022059:-83829 None:intergenic
GCAAAGAAGAAAGGTTGTAT+TGG 0.478560 tig0022059:+82770 Msa1396700:CDS
TGTCAAGTAAGGAACTTGTT+GGG 0.479149 tig0022059:+84743 Msa1396700:three_prime_UTR
TCCCCAACAACCTCCGGCGG+TGG 0.479641 tig0022059:+84523 Msa1396700:three_prime_UTR
GTGTCAAGTAAGGAACTTGT+TGG 0.482790 tig0022059:+84742 Msa1396700:three_prime_UTR
CACCACCGCCGCCACCGTGC+CGG 0.484275 tig0022059:-84665 Msa1396710:CDS
ATGGGAGGATTAGTAAGCTC+AGG 0.484705 tig0022059:-83991 None:intergenic
GAAATCGTCGGAGTGAGCTT+AGG 0.485708 tig0022059:-84573 Msa1396710:CDS
AGGACAAAAGCAACAACAAA+TGG 0.492369 tig0022059:+83771 Msa1396700:CDS
TGTTTCCGGCACGGTGGCGG+CGG 0.505907 tig0022059:+84660 Msa1396700:three_prime_UTR
TTTGTGTCCCCAACAACCTC+CGG 0.512164 tig0022059:+84517 Msa1396700:three_prime_UTR
TCAGTGATGCTTTGTAAAGA+GGG 0.514695 tig0022059:-83828 None:intergenic
GTTGCTATAAATATTCTAGT+AGG 0.517379 tig0022059:+82612 Msa1396700:five_prime_UTR
TCCACCGCCGGAGGTTGTTG+GGG 0.517578 tig0022059:-84524 Msa1396710:intron
AACCAAATGGCAAAGAAGAA+AGG 0.522282 tig0022059:+82761 Msa1396700:CDS
CCAGAGAAGTGAAGTGAAGG+AGG 0.526333 tig0022059:-84144 None:intergenic
TACTCACATGTGATGACTCA+AGG 0.527011 tig0022059:+83880 Msa1396700:three_prime_UTR
TTTGACTCTTTGAAAACTAG+TGG 0.528818 tig0022059:+82575 Msa1396700:five_prime_UTR
TTGGTTTCAGAGGTTACAAA+GGG 0.536135 tig0022059:+83135 Msa1396700:intron
TCAGGGAGGGAACTCAGAAC+CGG 0.537465 tig0022059:-84606 Msa1396710:CDS
GATTCAAAACTCATATCAGC+TGG 0.538326 tig0022059:-83856 None:intergenic
TTGATGAGGAAATCAATTGA+AGG 0.541033 tig0022059:-84287 Msa1396710:CDS
ACTAGTGGTAAGAGAGTGAG+TGG 0.541714 tig0022059:+82590 Msa1396700:five_prime_UTR
CTTGTGATACAGCAACCAAA+TGG 0.541988 tig0022059:+82748 Msa1396700:CDS
ACATGATTGCTTAGATCTGT+GGG 0.557047 tig0022059:+83904 Msa1396700:three_prime_UTR
GACATGATTGCTTAGATCTG+TGG 0.558047 tig0022059:+83903 Msa1396700:three_prime_UTR
TTTCTTCTTCAAGAAGAGGA+AGG 0.558868 tig0022059:-82677 None:intergenic
GTCTTCTCATGTTTCCGGCA+CGG 0.562757 tig0022059:+84651 Msa1396700:three_prime_UTR
GTGAGCTTAGGTAGACGGAA+AGG 0.568945 tig0022059:-84561 Msa1396710:CDS
TGAGCTTAGGTAGACGGAAA+GGG 0.574700 tig0022059:-84560 Msa1396710:CDS
GAAGAGCAACATAGTGATCA+GGG 0.575247 tig0022059:-82825 None:intergenic
CCAAGCAAAAGTGTATCTGT+TGG 0.576593 tig0022059:-82970 None:intergenic
TACAAGTAAGTGAAGGATCA+GGG 0.577021 tig0022059:-84623 Msa1396710:CDS
GTTCCAGAGAAGTGAAGTGA+AGG 0.577749 tig0022059:-84147 None:intergenic
CCAAATGCAAAATATGGCTA+CGG 0.579931 tig0022059:-84706 Msa1396710:CDS
TTTGGTTTCAGAGGTTACAA+AGG 0.584060 tig0022059:+83134 Msa1396700:intron
AGAGGTTACAAAGGGTATGT+GGG 0.585748 tig0022059:+83143 Msa1396700:intron
TCGGAGTGAGCTTAGGTAGA+CGG 0.588237 tig0022059:-84566 Msa1396710:CDS
AGACGGAAAGGGACGGTCGG+CGG 0.591139 tig0022059:-84549 Msa1396710:CDS
TAAAGTGATTAATAATTACA+GGG 0.593348 tig0022059:-84019 None:intergenic
TATAGACTCATCTCAGCTCA+AGG 0.593800 tig0022059:+83000 Msa1396700:CDS
AAATAATAAGGAAGATGCAA+CGG 0.598797 tig0022059:-82650 None:intergenic
TCAAATGACCCCTAATTACA+GGG 0.604479 tig0022059:-83959 None:intergenic
TGGATCTATCCACAACCACA+AGG 0.605488 tig0022059:-84202 None:intergenic
GTCTGAACCTGAAGATAACA+AGG 0.608807 tig0022059:+83263 Msa1396700:CDS
TGAAGCACTGCATATTGATG+AGG 0.609628 tig0022059:-84301 Msa1396710:CDS
CTTAGGTAGACGGAAAGGGA+CGG 0.618125 tig0022059:-84556 Msa1396710:CDS
AGTCAAATCAGATTAAGGAA+AGG 0.621653 tig0022059:+83217 Msa1396700:CDS
CATTTCATCCCTGTAATTAG+GGG 0.623909 tig0022059:+83951 Msa1396700:three_prime_UTR
CAGAGAAGTGAAGTGAAGGA+GGG 0.625228 tig0022059:-84143 None:intergenic
ACTCACATGTGATGACTCAA+GGG 0.627657 tig0022059:+83881 Msa1396700:three_prime_UTR
AGTAAGTGAAGGATCAGGGA+GGG 0.629875 tig0022059:-84619 Msa1396710:CDS
GTGTCCCCAACAACCTCCGG+CGG 0.630049 tig0022059:+84520 Msa1396700:three_prime_UTR
TCGGCGGTTTCCACCGCCGG+AGG 0.630883 tig0022059:-84533 Msa1396710:intron
TGGGAGGATTAGTAAGCTCA+GGG 0.635180 tig0022059:-83990 None:intergenic
AATCTGAAAGACATGAGTCA+AGG 0.637514 tig0022059:+83751 Msa1396700:CDS
GATCTATCCACAACCACAAG+GGG 0.639953 tig0022059:-84200 None:intergenic
GGTAGACGGAAAGGGACGGT+CGG 0.642297 tig0022059:-84552 Msa1396710:CDS
GATGAACATAGGGGTAGACA+GGG 0.645678 tig0022059:-84107 None:intergenic
ACAAAAGCAACAACAAATGG+TGG 0.646145 tig0022059:+83774 Msa1396700:CDS
ACGAAACTACAAGTAAGTGA+AGG 0.651561 tig0022059:-84630 Msa1396710:CDS
GGAATCAGAATCGAAATCGT+CGG 0.654540 tig0022059:-84585 Msa1396710:CDS
GGATCTATCCACAACCACAA+GGG 0.657598 tig0022059:-84201 None:intergenic
AATTACAGGGATGAAATGGG+AGG 0.666408 tig0022059:-84006 None:intergenic
ATAATAATAAGTCAAGAACA+TGG 0.691937 tig0022059:+83802 Msa1396700:CDS
TTCTCATGTTTCCGGCACGG+TGG 0.703341 tig0022059:+84654 Msa1396700:three_prime_UTR
AAGTAAGTGAAGGATCAGGG+AGG 0.735147 tig0022059:-84620 Msa1396710:CDS
ATGAACATAGGGGTAGACAG+GGG 0.756859 tig0022059:-84106 None:intergenic
GTTGTTGGGGACACAAACGA+CGG 0.759292 tig0022059:-84511 Msa1396710:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GATTAATAATAATTTATGAT+TGG + tig0022059:83707-83726 Msa1396700:intron 10.0%
!! ATTATTAATCACTTTAAATT+TGG + tig0022059:84026-84045 Msa1396700:three_prime_UTR 10.0%
!! GATTAATAATAATTTATGAT+TGG + tig0022059:83707-83726 Msa1396700:intron 10.0%
!! ATTATTAATCACTTTAAATT+TGG + tig0022059:84026-84045 Msa1396700:three_prime_UTR 10.0%
!! TATAAAGAATCAAAAGAAAA+AGG - tig0022059:83056-83075 None:intergenic 15.0%
!!! AGAACAAAATAATCTTTTAA+GGG - tig0022059:83089-83108 None:intergenic 15.0%
!!! AAGAACAAAATAATCTTTTA+AGG - tig0022059:83090-83109 None:intergenic 15.0%
!!! TACACATTGATTATTTTTTT+TGG + tig0022059:83463-83482 Msa1396700:intron 15.0%
!! GATAATGCATAATATATATA+AGG - tig0022059:83502-83521 None:intergenic 15.0%
!! TTATGTACATTAACTAATTA+AGG + tig0022059:83560-83579 Msa1396700:intron 15.0%
!! TAAAGTGATTAATAATTACA+GGG - tig0022059:84022-84041 None:intergenic 15.0%
!! TTAAAGTGATTAATAATTAC+AGG - tig0022059:84023-84042 None:intergenic 15.0%
!! AAAAAGAAAAGAAAAGAAAT+TGG + tig0022059:84814-84833 Msa1396700:three_prime_UTR 15.0%
!! TATAAAGAATCAAAAGAAAA+AGG - tig0022059:83056-83075 None:intergenic 15.0%
!!! AGAACAAAATAATCTTTTAA+GGG - tig0022059:83089-83108 None:intergenic 15.0%
!!! AAGAACAAAATAATCTTTTA+AGG - tig0022059:83090-83109 None:intergenic 15.0%
!!! TACACATTGATTATTTTTTT+TGG + tig0022059:83463-83482 Msa1396700:intron 15.0%
!! GATAATGCATAATATATATA+AGG - tig0022059:83502-83521 None:intergenic 15.0%
!! TTATGTACATTAACTAATTA+AGG + tig0022059:83560-83579 Msa1396700:intron 15.0%
!! TAAAGTGATTAATAATTACA+GGG - tig0022059:84022-84041 None:intergenic 15.0%
!! TTAAAGTGATTAATAATTAC+AGG - tig0022059:84023-84042 None:intergenic 15.0%
!! AAAAAGAAAAGAAAAGAAAT+TGG + tig0022059:84814-84833 Msa1396700:three_prime_UTR 15.0%
!! TTAATGATAAAACAGCTAAT+AGG + tig0022059:83241-83260 Msa1396700:CDS 20.0%
!! CATAATATATATAAGGTTTG+AGG - tig0022059:83495-83514 None:intergenic 20.0%
!! ATAATAATAAGTCAAGAACA+TGG + tig0022059:83802-83821 Msa1396700:CDS 20.0%
!!! AACAATTTTTTACATCACTA+AGG + tig0022059:84422-84441 Msa1396700:three_prime_UTR 20.0%
!! TTAATGATAAAACAGCTAAT+AGG + tig0022059:83241-83260 Msa1396700:CDS 20.0%
!! CATAATATATATAAGGTTTG+AGG - tig0022059:83495-83514 None:intergenic 20.0%
!! ATAATAATAAGTCAAGAACA+TGG + tig0022059:83802-83821 Msa1396700:CDS 20.0%
!!! AACAATTTTTTACATCACTA+AGG + tig0022059:84422-84441 Msa1396700:three_prime_UTR 20.0%
! GTTGCTATAAATATTCTAGT+AGG + tig0022059:82612-82631 Msa1396700:five_prime_UTR 25.0%
! AAATAATAAGGAAGATGCAA+CGG - tig0022059:82653-82672 None:intergenic 25.0%
! GAGGAAGGATATAAATAATA+AGG - tig0022059:82665-82684 None:intergenic 25.0%
! AAAAAGAAGTGAGAGATAAT+GGG + tig0022059:82697-82716 Msa1396700:exon 25.0%
!!! TTGAGTCTTTATGTTGTTTT+TGG + tig0022059:83116-83135 Msa1396700:intron 25.0%
! ACAAAAGTCAAATCAGATTA+AGG + tig0022059:83212-83231 Msa1396700:CDS 25.0%
! TATAGTTACTGTTCATAAGA+AGG - tig0022059:83417-83436 None:intergenic 25.0%
! TACATTAACTAATTAAGGTC+TGG + tig0022059:83565-83584 Msa1396700:intron 25.0%
!! GGTCTGGTTATAAATTTTAT+TGG + tig0022059:83581-83600 Msa1396700:intron 25.0%
!!! ATGATTGGTTCATTATTTTC+AGG + tig0022059:83722-83741 Msa1396700:intron 25.0%
! ATCTGTGGGAAATTAAATTA+AGG + tig0022059:83918-83937 Msa1396700:three_prime_UTR 25.0%
! TCTGTGGGAAATTAAATTAA+GGG + tig0022059:83919-83938 Msa1396700:three_prime_UTR 25.0%
! AATAATTACAGGGATGAAAT+GGG - tig0022059:84012-84031 None:intergenic 25.0%
! TAATAATTACAGGGATGAAA+TGG - tig0022059:84013-84032 None:intergenic 25.0%
! TAAGGGCAAAATTCTTAATT+AGG - tig0022059:84053-84072 None:intergenic 25.0%
!!! ATTTTGAGAAGATGAACATA+GGG - tig0022059:84120-84139 None:intergenic 25.0%
!!! TTTTTTAAAGTTCTTTTGGG+AGG - tig0022059:84180-84199 None:intergenic 25.0%
!!! GGGTTTTTTAAAGTTCTTTT+GGG - tig0022059:84183-84202 None:intergenic 25.0%
!!! AAAACCATGTGTTTTTTTGT+AGG - tig0022059:84230-84249 Msa1396710:CDS 25.0%
!!! GAAATTGGTGTTTTAGAAAT+TGG + tig0022059:84771-84790 Msa1396700:three_prime_UTR 25.0%
! GTTGCTATAAATATTCTAGT+AGG + tig0022059:82612-82631 Msa1396700:five_prime_UTR 25.0%
! AAATAATAAGGAAGATGCAA+CGG - tig0022059:82653-82672 None:intergenic 25.0%
! GAGGAAGGATATAAATAATA+AGG - tig0022059:82665-82684 None:intergenic 25.0%
! AAAAAGAAGTGAGAGATAAT+GGG + tig0022059:82697-82716 Msa1396700:exon 25.0%
!!! TTGAGTCTTTATGTTGTTTT+TGG + tig0022059:83116-83135 Msa1396700:intron 25.0%
! ACAAAAGTCAAATCAGATTA+AGG + tig0022059:83212-83231 Msa1396700:CDS 25.0%
! TATAGTTACTGTTCATAAGA+AGG - tig0022059:83417-83436 None:intergenic 25.0%
! TACATTAACTAATTAAGGTC+TGG + tig0022059:83565-83584 Msa1396700:intron 25.0%
!! GGTCTGGTTATAAATTTTAT+TGG + tig0022059:83581-83600 Msa1396700:intron 25.0%
!!! ATGATTGGTTCATTATTTTC+AGG + tig0022059:83722-83741 Msa1396700:intron 25.0%
! ATCTGTGGGAAATTAAATTA+AGG + tig0022059:83918-83937 Msa1396700:three_prime_UTR 25.0%
! TCTGTGGGAAATTAAATTAA+GGG + tig0022059:83919-83938 Msa1396700:three_prime_UTR 25.0%
! AATAATTACAGGGATGAAAT+GGG - tig0022059:84012-84031 None:intergenic 25.0%
! TAATAATTACAGGGATGAAA+TGG - tig0022059:84013-84032 None:intergenic 25.0%
! TAAGGGCAAAATTCTTAATT+AGG - tig0022059:84053-84072 None:intergenic 25.0%
!!! ATTTTGAGAAGATGAACATA+GGG - tig0022059:84120-84139 None:intergenic 25.0%
!!! TTTTTTAAAGTTCTTTTGGG+AGG - tig0022059:84180-84199 None:intergenic 25.0%
!!! GGGTTTTTTAAAGTTCTTTT+GGG - tig0022059:84183-84202 None:intergenic 25.0%
!!! AAAACCATGTGTTTTTTTGT+AGG - tig0022059:84230-84249 Msa1396710:CDS 25.0%
!!! GAAATTGGTGTTTTAGAAAT+TGG + tig0022059:84771-84790 Msa1396700:three_prime_UTR 25.0%
! TTTGACTCTTTGAAAACTAG+TGG + tig0022059:82575-82594 Msa1396700:five_prime_UTR 30.0%
! TCTTTTTCTTCTTCAAGAAG+AGG - tig0022059:82684-82703 None:intergenic 30.0%
GAAAAAGAAGTGAGAGATAA+TGG + tig0022059:82696-82715 Msa1396700:exon 30.0%
!!! TTTTGAAGTGCATAATGTTG+TGG - tig0022059:82857-82876 None:intergenic 30.0%
!!! TATGTTGTTTTTGGTTTCAG+AGG + tig0022059:83125-83144 Msa1396700:intron 30.0%
AGTCAAATCAGATTAAGGAA+AGG + tig0022059:83217-83236 Msa1396700:CDS 30.0%
! AGATTTACCTTGTTATCTTC+AGG - tig0022059:83273-83292 None:intergenic 30.0%
AGATTCAATCAACATGGATT+TGG - tig0022059:83328-83347 None:intergenic 30.0%
AAGAACATGAATATCTTCAG+TGG + tig0022059:83350-83369 Msa1396700:intron 30.0%
!! TAAGAGAGAGATTTGTTGAA+TGG + tig0022059:83683-83702 Msa1396700:intron 30.0%
!! TTTTGAGAAGATGAACATAG+GGG - tig0022059:84119-84138 None:intergenic 30.0%
!! GATTTTGAGAAGATGAACAT+AGG - tig0022059:84121-84140 None:intergenic 30.0%
!!! GGGGTTTTTTAAAGTTCTTT+TGG - tig0022059:84184-84203 None:intergenic 30.0%
!!! CATGTGTTTTTTTGTAGGTA+TGG - tig0022059:84225-84244 None:intergenic 30.0%
CATACCTACAAAAAAACACA+TGG + tig0022059:84223-84242 Msa1396700:three_prime_UTR 30.0%
AAGGAGAAGTAGTTGAAAAA+GGG - tig0022059:84271-84290 Msa1396710:CDS 30.0%
TTGATGAGGAAATCAATTGA+AGG - tig0022059:84290-84309 Msa1396710:CDS 30.0%
!! CTTCTTCATTTTTCACTTGT+AGG + tig0022059:84327-84346 Msa1396700:three_prime_UTR 30.0%
!! CATTGGAAAATTCTAGTTCA+GGG - tig0022059:84354-84373 Msa1396710:intron 30.0%
!! ACATTGGAAAATTCTAGTTC+AGG - tig0022059:84355-84374 Msa1396710:intron 30.0%
!! GTTGTTGTTGTGTTTTACAT+TGG - tig0022059:84371-84390 Msa1396710:intron 30.0%
AATGACCCAAATGCAAAATA+TGG - tig0022059:84715-84734 None:intergenic 30.0%
! ATTGTTTCTTGTGTCAAGTA+AGG + tig0022059:84732-84751 Msa1396700:three_prime_UTR 30.0%
! ACTTGTTGGGATTTAGAAAT+TGG + tig0022059:84756-84775 Msa1396700:three_prime_UTR 30.0%
! TTTGACTCTTTGAAAACTAG+TGG + tig0022059:82575-82594 Msa1396700:five_prime_UTR 30.0%
! TCTTTTTCTTCTTCAAGAAG+AGG - tig0022059:82684-82703 None:intergenic 30.0%
GAAAAAGAAGTGAGAGATAA+TGG + tig0022059:82696-82715 Msa1396700:exon 30.0%
!!! TTTTGAAGTGCATAATGTTG+TGG - tig0022059:82857-82876 None:intergenic 30.0%
!!! TATGTTGTTTTTGGTTTCAG+AGG + tig0022059:83125-83144 Msa1396700:intron 30.0%
AGTCAAATCAGATTAAGGAA+AGG + tig0022059:83217-83236 Msa1396700:CDS 30.0%
! AGATTTACCTTGTTATCTTC+AGG - tig0022059:83273-83292 None:intergenic 30.0%
AGATTCAATCAACATGGATT+TGG - tig0022059:83328-83347 None:intergenic 30.0%
AAGAACATGAATATCTTCAG+TGG + tig0022059:83350-83369 Msa1396700:intron 30.0%
!! TAAGAGAGAGATTTGTTGAA+TGG + tig0022059:83683-83702 Msa1396700:intron 30.0%
!! TTTTGAGAAGATGAACATAG+GGG - tig0022059:84119-84138 None:intergenic 30.0%
!! GATTTTGAGAAGATGAACAT+AGG - tig0022059:84121-84140 None:intergenic 30.0%
!!! GGGGTTTTTTAAAGTTCTTT+TGG - tig0022059:84184-84203 None:intergenic 30.0%
!!! CATGTGTTTTTTTGTAGGTA+TGG - tig0022059:84225-84244 None:intergenic 30.0%
CATACCTACAAAAAAACACA+TGG + tig0022059:84223-84242 Msa1396700:three_prime_UTR 30.0%
AAGGAGAAGTAGTTGAAAAA+GGG - tig0022059:84271-84290 Msa1396710:CDS 30.0%
TTGATGAGGAAATCAATTGA+AGG - tig0022059:84290-84309 Msa1396710:CDS 30.0%
!! CTTCTTCATTTTTCACTTGT+AGG + tig0022059:84327-84346 Msa1396700:three_prime_UTR 30.0%
!! CATTGGAAAATTCTAGTTCA+GGG - tig0022059:84354-84373 Msa1396710:intron 30.0%
!! ACATTGGAAAATTCTAGTTC+AGG - tig0022059:84355-84374 Msa1396710:intron 30.0%
!! GTTGTTGTTGTGTTTTACAT+TGG - tig0022059:84371-84390 Msa1396710:intron 30.0%
AATGACCCAAATGCAAAATA+TGG - tig0022059:84715-84734 None:intergenic 30.0%
! ATTGTTTCTTGTGTCAAGTA+AGG + tig0022059:84732-84751 Msa1396700:three_prime_UTR 30.0%
! ACTTGTTGGGATTTAGAAAT+TGG + tig0022059:84756-84775 Msa1396700:three_prime_UTR 30.0%
TTTCTTCTTCAAGAAGAGGA+AGG - tig0022059:82680-82699 None:intergenic 35.0%
AACCAAATGGCAAAGAAGAA+AGG + tig0022059:82761-82780 Msa1396700:CDS 35.0%
AACCTTTCTTCTTTGCCATT+TGG - tig0022059:82766-82785 None:intergenic 35.0%
GCAAAGAAGAAAGGTTGTAT+TGG + tig0022059:82770-82789 Msa1396700:CDS 35.0%
! TTTGGTTTCAGAGGTTACAA+AGG + tig0022059:83134-83153 Msa1396700:intron 35.0%
TTGGTTTCAGAGGTTACAAA+GGG + tig0022059:83135-83154 Msa1396700:intron 35.0%
!!! TTTGACTTTTGTGCTGATTC+TGG - tig0022059:83204-83223 None:intergenic 35.0%
TCTTGCAGATTCAATCAACA+TGG - tig0022059:83334-83353 None:intergenic 35.0%
TACTGTTCATAAGAAGGAGT+TGG - tig0022059:83411-83430 None:intergenic 35.0%
AATCTGAAAGACATGAGTCA+AGG + tig0022059:83751-83770 Msa1396700:CDS 35.0%
AGGACAAAAGCAACAACAAA+TGG + tig0022059:83771-83790 Msa1396700:CDS 35.0%
ACAAAAGCAACAACAAATGG+TGG + tig0022059:83774-83793 Msa1396700:CDS 35.0%
TCAGTGATGCTTTGTAAAGA+GGG - tig0022059:83831-83850 None:intergenic 35.0%
TTCAGTGATGCTTTGTAAAG+AGG - tig0022059:83832-83851 None:intergenic 35.0%
GATTCAAAACTCATATCAGC+TGG - tig0022059:83859-83878 None:intergenic 35.0%
ACATGATTGCTTAGATCTGT+GGG + tig0022059:83904-83923 Msa1396700:three_prime_UTR 35.0%
TGCATTTCATCCCTGTAATT+AGG + tig0022059:83949-83968 Msa1396700:three_prime_UTR 35.0%
GCATTTCATCCCTGTAATTA+GGG + tig0022059:83950-83969 Msa1396700:three_prime_UTR 35.0%
CATTTCATCCCTGTAATTAG+GGG + tig0022059:83951-83970 Msa1396700:three_prime_UTR 35.0%
TCAAATGACCCCTAATTACA+GGG - tig0022059:83962-83981 None:intergenic 35.0%
TTCAAATGACCCCTAATTAC+AGG - tig0022059:83963-83982 None:intergenic 35.0%
CGTGTCTCAGATTTCATTAA+GGG - tig0022059:84070-84089 None:intergenic 35.0%
ACGTGTCTCAGATTTCATTA+AGG - tig0022059:84071-84090 None:intergenic 35.0%
!! AAAGTTCTTTTGGGAGGAAA+TGG - tig0022059:84174-84193 None:intergenic 35.0%
! GAACTTTAAAAAACCCCTTG+TGG + tig0022059:84187-84206 Msa1396700:three_prime_UTR 35.0%
GAAGTAGTTGAAAAAGGGTT+TGG - tig0022059:84266-84285 Msa1396710:CDS 35.0%
GAAGGAGAAGTAGTTGAAAA+AGG - tig0022059:84272-84291 Msa1396710:CDS 35.0%
TACAAGTAAGTGAAGGATCA+GGG - tig0022059:84626-84645 Msa1396710:CDS 35.0%
ACGAAACTACAAGTAAGTGA+AGG - tig0022059:84633-84652 Msa1396710:CDS 35.0%
CCAAATGCAAAATATGGCTA+CGG - tig0022059:84709-84728 Msa1396710:CDS 35.0%
! CGTAGCCATATTTTGCATTT+GGG + tig0022059:84707-84726 Msa1396700:three_prime_UTR 35.0%
! TGTCAAGTAAGGAACTTGTT+GGG + tig0022059:84743-84762 Msa1396700:three_prime_UTR 35.0%
TTTCTTCTTCAAGAAGAGGA+AGG - tig0022059:82680-82699 None:intergenic 35.0%
AACCAAATGGCAAAGAAGAA+AGG + tig0022059:82761-82780 Msa1396700:CDS 35.0%
AACCTTTCTTCTTTGCCATT+TGG - tig0022059:82766-82785 None:intergenic 35.0%
GCAAAGAAGAAAGGTTGTAT+TGG + tig0022059:82770-82789 Msa1396700:CDS 35.0%
! TTTGGTTTCAGAGGTTACAA+AGG + tig0022059:83134-83153 Msa1396700:intron 35.0%
TTGGTTTCAGAGGTTACAAA+GGG + tig0022059:83135-83154 Msa1396700:intron 35.0%
!!! TTTGACTTTTGTGCTGATTC+TGG - tig0022059:83204-83223 None:intergenic 35.0%
TCTTGCAGATTCAATCAACA+TGG - tig0022059:83334-83353 None:intergenic 35.0%
TACTGTTCATAAGAAGGAGT+TGG - tig0022059:83411-83430 None:intergenic 35.0%
AATCTGAAAGACATGAGTCA+AGG + tig0022059:83751-83770 Msa1396700:CDS 35.0%
AGGACAAAAGCAACAACAAA+TGG + tig0022059:83771-83790 Msa1396700:CDS 35.0%
ACAAAAGCAACAACAAATGG+TGG + tig0022059:83774-83793 Msa1396700:CDS 35.0%
TCAGTGATGCTTTGTAAAGA+GGG - tig0022059:83831-83850 None:intergenic 35.0%
TTCAGTGATGCTTTGTAAAG+AGG - tig0022059:83832-83851 None:intergenic 35.0%
GATTCAAAACTCATATCAGC+TGG - tig0022059:83859-83878 None:intergenic 35.0%
ACATGATTGCTTAGATCTGT+GGG + tig0022059:83904-83923 Msa1396700:three_prime_UTR 35.0%
TGCATTTCATCCCTGTAATT+AGG + tig0022059:83949-83968 Msa1396700:three_prime_UTR 35.0%
GCATTTCATCCCTGTAATTA+GGG + tig0022059:83950-83969 Msa1396700:three_prime_UTR 35.0%
CATTTCATCCCTGTAATTAG+GGG + tig0022059:83951-83970 Msa1396700:three_prime_UTR 35.0%
TCAAATGACCCCTAATTACA+GGG - tig0022059:83962-83981 None:intergenic 35.0%
TTCAAATGACCCCTAATTAC+AGG - tig0022059:83963-83982 None:intergenic 35.0%
CGTGTCTCAGATTTCATTAA+GGG - tig0022059:84070-84089 None:intergenic 35.0%
ACGTGTCTCAGATTTCATTA+AGG - tig0022059:84071-84090 None:intergenic 35.0%
!! AAAGTTCTTTTGGGAGGAAA+TGG - tig0022059:84174-84193 None:intergenic 35.0%
! GAACTTTAAAAAACCCCTTG+TGG + tig0022059:84187-84206 Msa1396700:three_prime_UTR 35.0%
GAAGTAGTTGAAAAAGGGTT+TGG - tig0022059:84266-84285 Msa1396710:CDS 35.0%
GAAGGAGAAGTAGTTGAAAA+AGG - tig0022059:84272-84291 Msa1396710:CDS 35.0%
TACAAGTAAGTGAAGGATCA+GGG - tig0022059:84626-84645 Msa1396710:CDS 35.0%
ACGAAACTACAAGTAAGTGA+AGG - tig0022059:84633-84652 Msa1396710:CDS 35.0%
CCAAATGCAAAATATGGCTA+CGG - tig0022059:84709-84728 Msa1396710:CDS 35.0%
! CGTAGCCATATTTTGCATTT+GGG + tig0022059:84707-84726 Msa1396700:three_prime_UTR 35.0%
! TGTCAAGTAAGGAACTTGTT+GGG + tig0022059:84743-84762 Msa1396700:three_prime_UTR 35.0%
CTTGTGATACAGCAACCAAA+TGG + tig0022059:82748-82767 Msa1396700:CDS 40.0%
ATCACTTCACTAGCAGTAAC+TGG - tig0022059:82796-82815 None:intergenic 40.0%
GAAGAGCAACATAGTGATCA+GGG - tig0022059:82828-82847 None:intergenic 40.0%
AGAAGAGCAACATAGTGATC+AGG - tig0022059:82829-82848 None:intergenic 40.0%
! CCAAGCAAAAGTGTATCTGT+TGG - tig0022059:82973-82992 None:intergenic 40.0%
! CCAACAGATACACTTTTGCT+TGG + tig0022059:82970-82989 Msa1396700:CDS 40.0%
TATAGACTCATCTCAGCTCA+AGG + tig0022059:83000-83019 Msa1396700:CDS 40.0%
! AGAGGTTACAAAGGGTATGT+GGG + tig0022059:83143-83162 Msa1396700:intron 40.0%
GTCTGAACCTGAAGATAACA+AGG + tig0022059:83263-83282 Msa1396700:CDS 40.0%
CCTTGCTACTACAAAGTCAA+TGG - tig0022059:83633-83652 None:intergenic 40.0%
!! CCATTGACTTTGTAGTAGCA+AGG + tig0022059:83630-83649 Msa1396700:intron 40.0%
TACTCACATGTGATGACTCA+AGG + tig0022059:83880-83899 Msa1396700:three_prime_UTR 40.0%
ACTCACATGTGATGACTCAA+GGG + tig0022059:83881-83900 Msa1396700:three_prime_UTR 40.0%
GACATGATTGCTTAGATCTG+TGG + tig0022059:83903-83922 Msa1396700:three_prime_UTR 40.0%
AATTACAGGGATGAAATGGG+AGG - tig0022059:84009-84028 None:intergenic 40.0%
TAAAAAACCCCTTGTGGTTG+TGG + tig0022059:84193-84212 Msa1396700:three_prime_UTR 40.0%
! GTTGAAAAAGGGTTTGGTAG+TGG - tig0022059:84260-84279 Msa1396710:CDS 40.0%
!! TGAAGCACTGCATATTGATG+AGG - tig0022059:84304-84323 Msa1396710:CDS 40.0%
ACAACAACAACGTCATCTTC+TGG + tig0022059:84380-84399 Msa1396700:three_prime_UTR 40.0%
CAACAACAACGTCATCTTCT+GGG + tig0022059:84381-84400 Msa1396700:three_prime_UTR 40.0%
GGAATCAGAATCGAAATCGT+CGG - tig0022059:84588-84607 Msa1396710:CDS 40.0%
GACGATTTCGATTCTGATTC+CGG + tig0022059:84587-84606 Msa1396700:three_prime_UTR 40.0%
CTACAAGTAAGTGAAGGATC+AGG - tig0022059:84627-84646 Msa1396710:CDS 40.0%
GTTTCGTCTTCTCATGTTTC+CGG + tig0022059:84646-84665 Msa1396700:three_prime_UTR 40.0%
! CCGTAGCCATATTTTGCATT+TGG + tig0022059:84706-84725 Msa1396700:three_prime_UTR 40.0%
GTGTCAAGTAAGGAACTTGT+TGG + tig0022059:84742-84761 Msa1396700:three_prime_UTR 40.0%
CTTGTGATACAGCAACCAAA+TGG + tig0022059:82748-82767 Msa1396700:CDS 40.0%
ATCACTTCACTAGCAGTAAC+TGG - tig0022059:82796-82815 None:intergenic 40.0%
GAAGAGCAACATAGTGATCA+GGG - tig0022059:82828-82847 None:intergenic 40.0%
AGAAGAGCAACATAGTGATC+AGG - tig0022059:82829-82848 None:intergenic 40.0%
! CCAAGCAAAAGTGTATCTGT+TGG - tig0022059:82973-82992 None:intergenic 40.0%
! CCAACAGATACACTTTTGCT+TGG + tig0022059:82970-82989 Msa1396700:CDS 40.0%
TATAGACTCATCTCAGCTCA+AGG + tig0022059:83000-83019 Msa1396700:CDS 40.0%
! AGAGGTTACAAAGGGTATGT+GGG + tig0022059:83143-83162 Msa1396700:intron 40.0%
GTCTGAACCTGAAGATAACA+AGG + tig0022059:83263-83282 Msa1396700:CDS 40.0%
CCTTGCTACTACAAAGTCAA+TGG - tig0022059:83633-83652 None:intergenic 40.0%
!! CCATTGACTTTGTAGTAGCA+AGG + tig0022059:83630-83649 Msa1396700:intron 40.0%
TACTCACATGTGATGACTCA+AGG + tig0022059:83880-83899 Msa1396700:three_prime_UTR 40.0%
ACTCACATGTGATGACTCAA+GGG + tig0022059:83881-83900 Msa1396700:three_prime_UTR 40.0%
GACATGATTGCTTAGATCTG+TGG + tig0022059:83903-83922 Msa1396700:three_prime_UTR 40.0%
AATTACAGGGATGAAATGGG+AGG - tig0022059:84009-84028 None:intergenic 40.0%
TAAAAAACCCCTTGTGGTTG+TGG + tig0022059:84193-84212 Msa1396700:three_prime_UTR 40.0%
! GTTGAAAAAGGGTTTGGTAG+TGG - tig0022059:84260-84279 Msa1396710:CDS 40.0%
!! TGAAGCACTGCATATTGATG+AGG - tig0022059:84304-84323 Msa1396710:CDS 40.0%
ACAACAACAACGTCATCTTC+TGG + tig0022059:84380-84399 Msa1396700:three_prime_UTR 40.0%
CAACAACAACGTCATCTTCT+GGG + tig0022059:84381-84400 Msa1396700:three_prime_UTR 40.0%
GGAATCAGAATCGAAATCGT+CGG - tig0022059:84588-84607 Msa1396710:CDS 40.0%
GACGATTTCGATTCTGATTC+CGG + tig0022059:84587-84606 Msa1396700:three_prime_UTR 40.0%
CTACAAGTAAGTGAAGGATC+AGG - tig0022059:84627-84646 Msa1396710:CDS 40.0%
GTTTCGTCTTCTCATGTTTC+CGG + tig0022059:84646-84665 Msa1396700:three_prime_UTR 40.0%
! CCGTAGCCATATTTTGCATT+TGG + tig0022059:84706-84725 Msa1396700:three_prime_UTR 40.0%
GTGTCAAGTAAGGAACTTGT+TGG + tig0022059:84742-84761 Msa1396700:three_prime_UTR 40.0%
ACTAGTGGTAAGAGAGTGAG+TGG + tig0022059:82590-82609 Msa1396700:five_prime_UTR 45.0%
! CAGAGGTTACAAAGGGTATG+TGG + tig0022059:83142-83161 Msa1396700:intron 45.0%
! TGGGAGGATTAGTAAGCTCA+GGG - tig0022059:83993-84012 None:intergenic 45.0%
! ATGGGAGGATTAGTAAGCTC+AGG - tig0022059:83994-84013 None:intergenic 45.0%
ATGAACATAGGGGTAGACAG+GGG - tig0022059:84109-84128 None:intergenic 45.0%
GATGAACATAGGGGTAGACA+GGG - tig0022059:84110-84129 None:intergenic 45.0%
AGATGAACATAGGGGTAGAC+AGG - tig0022059:84111-84130 None:intergenic 45.0%
CAGAGAAGTGAAGTGAAGGA+GGG - tig0022059:84146-84165 None:intergenic 45.0%
GTTCCAGAGAAGTGAAGTGA+AGG - tig0022059:84150-84169 None:intergenic 45.0%
GATCTATCCACAACCACAAG+GGG - tig0022059:84203-84222 None:intergenic 45.0%
GGATCTATCCACAACCACAA+GGG - tig0022059:84204-84223 None:intergenic 45.0%
TGGATCTATCCACAACCACA+AGG - tig0022059:84205-84224 None:intergenic 45.0%
TGAGCTTAGGTAGACGGAAA+GGG - tig0022059:84563-84582 Msa1396710:CDS 45.0%
AGTAAGTGAAGGATCAGGGA+GGG - tig0022059:84622-84641 Msa1396710:CDS 45.0%
AAGTAAGTGAAGGATCAGGG+AGG - tig0022059:84623-84642 Msa1396710:CDS 45.0%
ACTAGTGGTAAGAGAGTGAG+TGG + tig0022059:82590-82609 Msa1396700:five_prime_UTR 45.0%
! CAGAGGTTACAAAGGGTATG+TGG + tig0022059:83142-83161 Msa1396700:intron 45.0%
! TGGGAGGATTAGTAAGCTCA+GGG - tig0022059:83993-84012 None:intergenic 45.0%
! ATGGGAGGATTAGTAAGCTC+AGG - tig0022059:83994-84013 None:intergenic 45.0%
ATGAACATAGGGGTAGACAG+GGG - tig0022059:84109-84128 None:intergenic 45.0%
GATGAACATAGGGGTAGACA+GGG - tig0022059:84110-84129 None:intergenic 45.0%
AGATGAACATAGGGGTAGAC+AGG - tig0022059:84111-84130 None:intergenic 45.0%
CAGAGAAGTGAAGTGAAGGA+GGG - tig0022059:84146-84165 None:intergenic 45.0%
GTTCCAGAGAAGTGAAGTGA+AGG - tig0022059:84150-84169 None:intergenic 45.0%
GATCTATCCACAACCACAAG+GGG - tig0022059:84203-84222 None:intergenic 45.0%
GGATCTATCCACAACCACAA+GGG - tig0022059:84204-84223 None:intergenic 45.0%
TGGATCTATCCACAACCACA+AGG - tig0022059:84205-84224 None:intergenic 45.0%
TGAGCTTAGGTAGACGGAAA+GGG - tig0022059:84563-84582 Msa1396710:CDS 45.0%
AGTAAGTGAAGGATCAGGGA+GGG - tig0022059:84622-84641 Msa1396710:CDS 45.0%
AAGTAAGTGAAGGATCAGGG+AGG - tig0022059:84623-84642 Msa1396710:CDS 45.0%
CCAGAGAAGTGAAGTGAAGG+AGG - tig0022059:84147-84166 None:intergenic 50.0%
CCTCCTTCACTTCACTTCTC+TGG + tig0022059:84144-84163 Msa1396700:three_prime_UTR 50.0%
GTTGTTGGGGACACAAACGA+CGG - tig0022059:84514-84533 Msa1396710:intron 50.0%
TTTGTGTCCCCAACAACCTC+CGG + tig0022059:84517-84536 Msa1396700:three_prime_UTR 50.0%
CTTAGGTAGACGGAAAGGGA+CGG - tig0022059:84559-84578 Msa1396710:CDS 50.0%
GTGAGCTTAGGTAGACGGAA+AGG - tig0022059:84564-84583 Msa1396710:CDS 50.0%
TCGGAGTGAGCTTAGGTAGA+CGG - tig0022059:84569-84588 Msa1396710:CDS 50.0%
GAAATCGTCGGAGTGAGCTT+AGG - tig0022059:84576-84595 Msa1396710:CDS 50.0%
GTCTTCTCATGTTTCCGGCA+CGG + tig0022059:84651-84670 Msa1396700:three_prime_UTR 50.0%
CCAGAGAAGTGAAGTGAAGG+AGG - tig0022059:84147-84166 None:intergenic 50.0%
CCTCCTTCACTTCACTTCTC+TGG + tig0022059:84144-84163 Msa1396700:three_prime_UTR 50.0%
GTTGTTGGGGACACAAACGA+CGG - tig0022059:84514-84533 Msa1396710:intron 50.0%
TTTGTGTCCCCAACAACCTC+CGG + tig0022059:84517-84536 Msa1396700:three_prime_UTR 50.0%
CTTAGGTAGACGGAAAGGGA+CGG - tig0022059:84559-84578 Msa1396710:CDS 50.0%
GTGAGCTTAGGTAGACGGAA+AGG - tig0022059:84564-84583 Msa1396710:CDS 50.0%
TCGGAGTGAGCTTAGGTAGA+CGG - tig0022059:84569-84588 Msa1396710:CDS 50.0%
GAAATCGTCGGAGTGAGCTT+AGG - tig0022059:84576-84595 Msa1396710:CDS 50.0%
GTCTTCTCATGTTTCCGGCA+CGG + tig0022059:84651-84670 Msa1396700:three_prime_UTR 50.0%
TCAGGGAGGGAACTCAGAAC+CGG - tig0022059:84609-84628 Msa1396710:CDS 55.0%
TTCTCATGTTTCCGGCACGG+TGG + tig0022059:84654-84673 Msa1396700:three_prime_UTR 55.0%
TCAGGGAGGGAACTCAGAAC+CGG - tig0022059:84609-84628 Msa1396710:CDS 55.0%
TTCTCATGTTTCCGGCACGG+TGG + tig0022059:84654-84673 Msa1396700:three_prime_UTR 55.0%
TTCCACCGCCGGAGGTTGTT+GGG - tig0022059:84528-84547 Msa1396710:intron 60.0%
TTTCCACCGCCGGAGGTTGT+TGG - tig0022059:84529-84548 Msa1396710:intron 60.0%
GGTAGACGGAAAGGGACGGT+CGG - tig0022059:84555-84574 Msa1396710:CDS 60.0%
TCATGTTTCCGGCACGGTGG+CGG + tig0022059:84657-84676 Msa1396700:three_prime_UTR 60.0%
TTCCACCGCCGGAGGTTGTT+GGG - tig0022059:84528-84547 Msa1396710:intron 60.0%
TTTCCACCGCCGGAGGTTGT+TGG - tig0022059:84529-84548 Msa1396710:intron 60.0%
GGTAGACGGAAAGGGACGGT+CGG - tig0022059:84555-84574 Msa1396710:CDS 60.0%
TCATGTTTCCGGCACGGTGG+CGG + tig0022059:84657-84676 Msa1396700:three_prime_UTR 60.0%
GTGTCCCCAACAACCTCCGG+CGG + tig0022059:84520-84539 Msa1396700:three_prime_UTR 65.0%
TCCACCGCCGGAGGTTGTTG+GGG - tig0022059:84527-84546 Msa1396710:intron 65.0%
AGACGGAAAGGGACGGTCGG+CGG - tig0022059:84552-84571 Msa1396710:CDS 65.0%
GTGTCCCCAACAACCTCCGG+CGG + tig0022059:84520-84539 Msa1396700:three_prime_UTR 65.0%
TCCACCGCCGGAGGTTGTTG+GGG - tig0022059:84527-84546 Msa1396710:intron 65.0%
AGACGGAAAGGGACGGTCGG+CGG - tig0022059:84552-84571 Msa1396710:CDS 65.0%
TCCCCAACAACCTCCGGCGG+TGG + tig0022059:84523-84542 Msa1396700:three_prime_UTR 70.0%
! TGTTTCCGGCACGGTGGCGG+CGG + tig0022059:84660-84679 Msa1396700:three_prime_UTR 70.0%
TCCCCAACAACCTCCGGCGG+TGG + tig0022059:84523-84542 Msa1396700:three_prime_UTR 70.0%
! TGTTTCCGGCACGGTGGCGG+CGG + tig0022059:84660-84679 Msa1396700:three_prime_UTR 70.0%
TCGGCGGTTTCCACCGCCGG+AGG - tig0022059:84536-84555 Msa1396710:CDS 75.0%
CGGTCGGCGGTTTCCACCGC+CGG - tig0022059:84539-84558 Msa1396710:CDS 75.0%
! GGTGGCGGCGGTGGTGGTGA+TGG + tig0022059:84672-84691 Msa1396700:three_prime_UTR 75.0%
TCGGCGGTTTCCACCGCCGG+AGG - tig0022059:84536-84555 Msa1396710:CDS 75.0%
CGGTCGGCGGTTTCCACCGC+CGG - tig0022059:84539-84558 Msa1396710:CDS 75.0%
! GGTGGCGGCGGTGGTGGTGA+TGG + tig0022059:84672-84691 Msa1396700:three_prime_UTR 75.0%
!! TTCCGGCACGGTGGCGGCGG+TGG + tig0022059:84663-84682 Msa1396700:three_prime_UTR 80.0%
! CACCACCGCCGCCACCGTGC+CGG - tig0022059:84668-84687 Msa1396710:CDS 80.0%
!! TTCCGGCACGGTGGCGGCGG+TGG + tig0022059:84663-84682 Msa1396700:three_prime_UTR 80.0%
! CACCACCGCCGCCACCGTGC+CGG - tig0022059:84668-84687 Msa1396710:CDS 80.0%
!! CGGCACGGTGGCGGCGGTGG+TGG + tig0022059:84666-84685 Msa1396700:three_prime_UTR 85.0%
!! CGGCACGGTGGCGGCGGTGG+TGG + tig0022059:84666-84685 Msa1396700:three_prime_UTR 85.0%
Chromosome Type Strat End Strand Name
tig0022059 gene 82568 84847 82568 ID=Msa1396700;Name=Msa1396700
tig0022059 mRNA 82568 84847 82568 ID=Msa1396700-mRNA-1;Parent=Msa1396700;Name=Msa1396700-mRNA-1;_AED=0.12;_eAED=0.12;_QI=147|1|1|1|1|1|3|984|188
tig0022059 exon 82568 83021 82568 ID=Msa1396700-mRNA-1:exon:15622;Parent=Msa1396700-mRNA-1
tig0022059 exon 83145 83284 83145 ID=Msa1396700-mRNA-1:exon:15623;Parent=Msa1396700-mRNA-1
tig0022059 exon 83744 84847 83744 ID=Msa1396700-mRNA-1:exon:15624;Parent=Msa1396700-mRNA-1
tig0022059 five_prime_UTR 82568 82714 82568 ID=Msa1396700-mRNA-1:five_prime_utr;Parent=Msa1396700-mRNA-1
tig0022059 CDS 82715 83021 82715 ID=Msa1396700-mRNA-1:cds;Parent=Msa1396700-mRNA-1
tig0022059 CDS 83145 83284 83145 ID=Msa1396700-mRNA-1:cds;Parent=Msa1396700-mRNA-1
tig0022059 CDS 83744 83863 83744 ID=Msa1396700-mRNA-1:cds;Parent=Msa1396700-mRNA-1
tig0022059 three_prime_UTR 83864 84847 83864 ID=Msa1396700-mRNA-1:three_prime_utr;Parent=Msa1396700-mRNA-1
Gene Sequence

>Msa1396700

ATGGGAAATTGTCAAGCTATTGATACAGCAACTCTTGTGATACAGCAACCAAATGGCAAAGAAGAAAGGTTGTATTGGCCAGTTACTGCTAGTGAAGTGATGAAGACACACCCTGATCACTATGTTGCTCTTCTTATCTCCACAACATTATGCACTTCAAAAGACAAAGAAAATTGTTCAAATAAGAGCAGCGACAACAACAACGACGACAACAACAACAACAAAGTTCGTATTACACGTATAAAACTTCTTAAGCCAACAGATACACTTTTGCTTGGTCAAGTTTATAGACTCATCTCAGCTCAAGAGGTTACAAAGGGTATGTGGGCTAAGAAACAAGCAAAGATGAAGAGAAACTCTTTGCCAGAATCAGCACAAAAGTCAAATCAGATTAAGGAAAGGATTAATGATAAAACAGCTAATAGGTCTGAACCTGAAGATAACAAGGAAACAAAATCTGAAAGACATGAGTCAAGGACAAAAGCAACAACAAATGGTGGCAATCATAATAATAAGTCAAGAACATGGCAACCCTCTTTACAAAGCATCACTGAATCTGCCAGCTGA
Protein sequence

>Msa1396700

MGNCQAIDTATLVIQQPNGKEERLYWPVTASEVMKTHPDHYVALLISTTLCTSKDKENCSNKSSDNNNDDNNNNKVRITRIKLLKPTDTLLLGQVYRLISAQEVTKGMWAKKQAKMKRNSLPESAQKSNQIKERINDKTANRSEPEDNKETKSERHESRTKATTNGGNHNNKSRTWQPSLQSITESAS*