AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1259240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1259240 MtrunA17_Chr4g0059361 97.340 188 4 1 1 188 1 187 2.69e-134 373
Msa1259240 MtrunA17_Chr3g0117971 54.974 191 75 3 1 188 1 183 2.41e-63 193
Msa1259240 MtrunA17_Chr5g0414281 42.328 189 87 4 1 186 1 170 6.96e-40 133
Msa1259240 MtrunA17_Chr4g0054191 38.624 189 94 4 1 188 1 168 6.40e-35 120
Msa1259240 MtrunA17_Chr8g0364591 38.378 185 99 4 1 185 1 170 4.13e-30 108
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1259240 AT5G62900.1 46.809 188 73 4 1 188 1 161 9.32e-48 153
Msa1259240 AT5G50090.1 44.444 189 73 4 1 188 1 158 6.64e-42 139
Msa1259240 AT5G50090.2 46.277 188 65 5 1 188 1 152 2.77e-41 137
Msa1259240 AT1G60010.1 41.489 188 95 4 1 188 1 173 1.26e-40 135
Msa1259240 AT5G50090.3 52.500 120 43 1 1 120 1 106 1.13e-35 122
Msa1259240 AT1G10530.1 35.638 188 99 3 1 188 1 166 8.72e-35 120
Msa1259240 AT5G67620.1 32.195 205 98 7 1 188 1 181 1.06e-23 92.8

Find 39 sgRNAs with CRISPR-Local

Find 142 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGGAAGGATATAAATAATA+AGG 0.287758 8_2:-60800443 None:intergenic
AACCTTTCTTCTTTGCCATT+TGG 0.302263 8_2:-60800544 None:intergenic
ACAAAAGTCAAATCAGATTA+AGG 0.303462 8_2:+60800993 Msa1259240:CDS
TAATATCTGAATACATTAAA+TGG 0.306309 8_2:-60801853 None:intergenic
AGATTTACCTTGTTATCTTC+AGG 0.363890 8_2:-60801051 None:intergenic
TTAATGATAAAACAGCTAAT+AGG 0.376595 8_2:+60801022 Msa1259240:CDS
ATCACTTCACTAGCAGTAAC+TGG 0.406024 8_2:-60800574 None:intergenic
AGAAGAGCAACATAGTGATC+AGG 0.427746 8_2:-60800607 None:intergenic
CAGAGGTTACAAAGGGTATG+TGG 0.456771 8_2:+60800923 Msa1259240:intron
TTCAGTGATGCTTTGTAAAG+AGG 0.477664 8_2:-60801613 None:intergenic
GCAAAGAAGAAAGGTTGTAT+TGG 0.478560 8_2:+60800551 Msa1259240:CDS
GAGGCTTCAAGTTGCTGAAA+GGG 0.480242 8_2:-60801777 None:intergenic
AGGACAAAAGCAACAACAAA+TGG 0.492369 8_2:+60801555 Msa1259240:CDS
TCAGTGATGCTTTGTAAAGA+GGG 0.514695 8_2:-60801612 None:intergenic
GTTGCTATAAATATTCTAGT+AGG 0.517379 8_2:+60800393 Msa1259240:five_prime_UTR
AACCAAATGGCAAAGAAGAA+AGG 0.522282 8_2:+60800542 Msa1259240:CDS
TACTCACATGTGATGACTCA+AGG 0.527011 8_2:+60801664 Msa1259240:three_prime_UTR
TTTGACTCTTTGAAAACTAG+TGG 0.528818 8_2:+60800356 Msa1259240:five_prime_UTR
TTGGTTTCAGAGGTTACAAA+GGG 0.536135 8_2:+60800916 Msa1259240:intron
GATTCAAAACTCATATCAGC+TGG 0.538326 8_2:-60801640 None:intergenic
ACTAGTGGTAAGAGAGTGAG+TGG 0.541714 8_2:+60800371 Msa1259240:five_prime_UTR
CTTGTGATACAGCAACCAAA+TGG 0.541988 8_2:+60800529 Msa1259240:CDS
TGAGGCTTCAAGTTGCTGAA+AGG 0.552360 8_2:-60801778 None:intergenic
ACATGATTGCTTAGATCTGT+GGG 0.557047 8_2:+60801688 Msa1259240:three_prime_UTR
GACATGATTGCTTAGATCTG+TGG 0.558047 8_2:+60801687 Msa1259240:three_prime_UTR
TTTCTTCTTCAAGAAGAGGA+AGG 0.558868 8_2:-60800458 None:intergenic
GAAGAGCAACATAGTGATCA+GGG 0.575247 8_2:-60800606 None:intergenic
CCAAGCAAAAGTGTATCTGT+TGG 0.576593 8_2:-60800751 None:intergenic
TTTGGTTTCAGAGGTTACAA+AGG 0.584060 8_2:+60800915 Msa1259240:intron
AGAGGTTACAAAGGGTATGT+GGG 0.585748 8_2:+60800924 Msa1259240:intron
TATAGACTCATCTCAGCTCA+AGG 0.593800 8_2:+60800781 Msa1259240:CDS
AAATAATAAGGAAGATGCAA+CGG 0.598797 8_2:-60800431 None:intergenic
ATACACAATTATTATGCATG+AGG 0.604912 8_2:-60801796 None:intergenic
GTCTGAACCTGAAGATAACA+AGG 0.608807 8_2:+60801044 Msa1259240:CDS
AGTCAAATCAGATTAAGGAA+AGG 0.621653 8_2:+60800998 Msa1259240:CDS
ACTCACATGTGATGACTCAA+GGG 0.627657 8_2:+60801665 Msa1259240:three_prime_UTR
AATCTGAAAGACATGAGTCA+AGG 0.637514 8_2:+60801535 Msa1259240:CDS
ACAAAAGCAACAACAAATGG+TGG 0.646145 8_2:+60801558 Msa1259240:CDS
ATAATAATAAGTCAAGAACA+TGG 0.691937 8_2:+60801586 Msa1259240:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTTACATTAACTAATTA+AGG + chr8_2:60801344-60801363 Msa1259240:intron 10.0%
!! GATTAATAATAATTTATGAT+TGG + chr8_2:60801491-60801510 Msa1259240:intron 10.0%
!!! AATTAAATATAACACATTTT+AGG + chr8_2:60801717-60801736 Msa1259240:three_prime_UTR 10.0%
!!! ATTAAATATAACACATTTTA+GGG + chr8_2:60801718-60801737 Msa1259240:three_prime_UTR 10.0%
!! TTATTTACATTAACTAATTA+AGG + chr8_2:60801344-60801363 Msa1259240:intron 10.0%
!! GATTAATAATAATTTATGAT+TGG + chr8_2:60801491-60801510 Msa1259240:intron 10.0%
!!! AATTAAATATAACACATTTT+AGG + chr8_2:60801717-60801736 Msa1259240:three_prime_UTR 10.0%
!!! ATTAAATATAACACATTTTA+GGG + chr8_2:60801718-60801737 Msa1259240:three_prime_UTR 10.0%
!! TATAAAGAATCAAAAGAAAA+AGG - chr8_2:60800837-60800856 None:intergenic 15.0%
!!! AGAACAAAATAATCTTTTAA+GGG - chr8_2:60800870-60800889 None:intergenic 15.0%
!!! AAGAACAAAATAATCTTTTA+AGG - chr8_2:60800871-60800890 None:intergenic 15.0%
!!! ACACATTGATTATTTTTTTT+TGG + chr8_2:60801245-60801264 Msa1259240:intron 15.0%
!! TAATATATATATAAGGTTTG+AGG - chr8_2:60801277-60801296 None:intergenic 15.0%
!! CAATGCATAATATATATATA+AGG - chr8_2:60801284-60801303 None:intergenic 15.0%
!!! TTATCATCTTTTATATTTCT+AGG - chr8_2:60801753-60801772 None:intergenic 15.0%
!! TAATATCTGAATACATTAAA+TGG - chr8_2:60801856-60801875 None:intergenic 15.0%
!! TATAAAGAATCAAAAGAAAA+AGG - chr8_2:60800837-60800856 None:intergenic 15.0%
!!! AGAACAAAATAATCTTTTAA+GGG - chr8_2:60800870-60800889 None:intergenic 15.0%
!!! AAGAACAAAATAATCTTTTA+AGG - chr8_2:60800871-60800890 None:intergenic 15.0%
!!! ACACATTGATTATTTTTTTT+TGG + chr8_2:60801245-60801264 Msa1259240:intron 15.0%
!! TAATATATATATAAGGTTTG+AGG - chr8_2:60801277-60801296 None:intergenic 15.0%
!! CAATGCATAATATATATATA+AGG - chr8_2:60801284-60801303 None:intergenic 15.0%
!!! TTATCATCTTTTATATTTCT+AGG - chr8_2:60801753-60801772 None:intergenic 15.0%
!! TAATATCTGAATACATTAAA+TGG - chr8_2:60801856-60801875 None:intergenic 15.0%
!! TTAATGATAAAACAGCTAAT+AGG + chr8_2:60801022-60801041 Msa1259240:CDS 20.0%
!! ATAATAATAAGTCAAGAACA+TGG + chr8_2:60801586-60801605 Msa1259240:CDS 20.0%
!! TTAATGATAAAACAGCTAAT+AGG + chr8_2:60801022-60801041 Msa1259240:CDS 20.0%
!! ATAATAATAAGTCAAGAACA+TGG + chr8_2:60801586-60801605 Msa1259240:CDS 20.0%
! GTTGCTATAAATATTCTAGT+AGG + chr8_2:60800393-60800412 Msa1259240:five_prime_UTR 25.0%
! AAATAATAAGGAAGATGCAA+CGG - chr8_2:60800434-60800453 None:intergenic 25.0%
! GAGGAAGGATATAAATAATA+AGG - chr8_2:60800446-60800465 None:intergenic 25.0%
! AAAAAGAAGTGAGAGATAAT+GGG + chr8_2:60800478-60800497 Msa1259240:exon 25.0%
!!! TTGAGTCTTTATGTTGTTTT+TGG + chr8_2:60800897-60800916 Msa1259240:intron 25.0%
! ACAAAAGTCAAATCAGATTA+AGG + chr8_2:60800993-60801012 Msa1259240:CDS 25.0%
! TATAGTTACTGTTCATAAGA+AGG - chr8_2:60801198-60801217 None:intergenic 25.0%
! TACATTAACTAATTAAGGTC+TGG + chr8_2:60801349-60801368 Msa1259240:intron 25.0%
!! GGTCTGGTTATAAATTTTAT+TGG + chr8_2:60801365-60801384 Msa1259240:intron 25.0%
!!! ATGATTGGTTCATTATTTTC+AGG + chr8_2:60801506-60801525 Msa1259240:intron 25.0%
!!! AATATAACACATTTTAGGGA+AGG + chr8_2:60801722-60801741 Msa1259240:three_prime_UTR 25.0%
! ATACACAATTATTATGCATG+AGG - chr8_2:60801799-60801818 None:intergenic 25.0%
! GTTGCTATAAATATTCTAGT+AGG + chr8_2:60800393-60800412 Msa1259240:five_prime_UTR 25.0%
! AAATAATAAGGAAGATGCAA+CGG - chr8_2:60800434-60800453 None:intergenic 25.0%
! GAGGAAGGATATAAATAATA+AGG - chr8_2:60800446-60800465 None:intergenic 25.0%
! AAAAAGAAGTGAGAGATAAT+GGG + chr8_2:60800478-60800497 Msa1259240:exon 25.0%
!!! TTGAGTCTTTATGTTGTTTT+TGG + chr8_2:60800897-60800916 Msa1259240:intron 25.0%
! ACAAAAGTCAAATCAGATTA+AGG + chr8_2:60800993-60801012 Msa1259240:CDS 25.0%
! TATAGTTACTGTTCATAAGA+AGG - chr8_2:60801198-60801217 None:intergenic 25.0%
! TACATTAACTAATTAAGGTC+TGG + chr8_2:60801349-60801368 Msa1259240:intron 25.0%
!! GGTCTGGTTATAAATTTTAT+TGG + chr8_2:60801365-60801384 Msa1259240:intron 25.0%
!!! ATGATTGGTTCATTATTTTC+AGG + chr8_2:60801506-60801525 Msa1259240:intron 25.0%
!!! AATATAACACATTTTAGGGA+AGG + chr8_2:60801722-60801741 Msa1259240:three_prime_UTR 25.0%
! ATACACAATTATTATGCATG+AGG - chr8_2:60801799-60801818 None:intergenic 25.0%
! TTTGACTCTTTGAAAACTAG+TGG + chr8_2:60800356-60800375 Msa1259240:five_prime_UTR 30.0%
! TCTTTTTCTTCTTCAAGAAG+AGG - chr8_2:60800465-60800484 None:intergenic 30.0%
GAAAAAGAAGTGAGAGATAA+TGG + chr8_2:60800477-60800496 Msa1259240:exon 30.0%
!!! TTTTGAAGTGCATAATGTTG+TGG - chr8_2:60800638-60800657 None:intergenic 30.0%
!!! TATGTTGTTTTTGGTTTCAG+AGG + chr8_2:60800906-60800925 Msa1259240:intron 30.0%
AGTCAAATCAGATTAAGGAA+AGG + chr8_2:60800998-60801017 Msa1259240:CDS 30.0%
! AGATTTACCTTGTTATCTTC+AGG - chr8_2:60801054-60801073 None:intergenic 30.0%
AGATTCAATCAACATGGATT+TGG - chr8_2:60801109-60801128 None:intergenic 30.0%
AAGAACATGAATATCTTCAG+TGG + chr8_2:60801131-60801150 Msa1259240:intron 30.0%
TATCAAGTGAGTTAAGCTTA+CGG + chr8_2:60801308-60801327 Msa1259240:intron 30.0%
!! TAAGAGAGAGATTTGTTGAA+TGG + chr8_2:60801467-60801486 Msa1259240:intron 30.0%
! TTTGACTCTTTGAAAACTAG+TGG + chr8_2:60800356-60800375 Msa1259240:five_prime_UTR 30.0%
! TCTTTTTCTTCTTCAAGAAG+AGG - chr8_2:60800465-60800484 None:intergenic 30.0%
GAAAAAGAAGTGAGAGATAA+TGG + chr8_2:60800477-60800496 Msa1259240:exon 30.0%
!!! TTTTGAAGTGCATAATGTTG+TGG - chr8_2:60800638-60800657 None:intergenic 30.0%
!!! TATGTTGTTTTTGGTTTCAG+AGG + chr8_2:60800906-60800925 Msa1259240:intron 30.0%
AGTCAAATCAGATTAAGGAA+AGG + chr8_2:60800998-60801017 Msa1259240:CDS 30.0%
! AGATTTACCTTGTTATCTTC+AGG - chr8_2:60801054-60801073 None:intergenic 30.0%
AGATTCAATCAACATGGATT+TGG - chr8_2:60801109-60801128 None:intergenic 30.0%
AAGAACATGAATATCTTCAG+TGG + chr8_2:60801131-60801150 Msa1259240:intron 30.0%
TATCAAGTGAGTTAAGCTTA+CGG + chr8_2:60801308-60801327 Msa1259240:intron 30.0%
!! TAAGAGAGAGATTTGTTGAA+TGG + chr8_2:60801467-60801486 Msa1259240:intron 30.0%
TTTCTTCTTCAAGAAGAGGA+AGG - chr8_2:60800461-60800480 None:intergenic 35.0%
AACCAAATGGCAAAGAAGAA+AGG + chr8_2:60800542-60800561 Msa1259240:CDS 35.0%
AACCTTTCTTCTTTGCCATT+TGG - chr8_2:60800547-60800566 None:intergenic 35.0%
GCAAAGAAGAAAGGTTGTAT+TGG + chr8_2:60800551-60800570 Msa1259240:CDS 35.0%
! TTTGGTTTCAGAGGTTACAA+AGG + chr8_2:60800915-60800934 Msa1259240:intron 35.0%
TTGGTTTCAGAGGTTACAAA+GGG + chr8_2:60800916-60800935 Msa1259240:intron 35.0%
!!! TTTGACTTTTGTGCTGATTC+TGG - chr8_2:60800985-60801004 None:intergenic 35.0%
TCTTGCAGATTCAATCAACA+TGG - chr8_2:60801115-60801134 None:intergenic 35.0%
TACTGTTCATAAGAAGGAGT+TGG - chr8_2:60801192-60801211 None:intergenic 35.0%
AATCTGAAAGACATGAGTCA+AGG + chr8_2:60801535-60801554 Msa1259240:CDS 35.0%
AGGACAAAAGCAACAACAAA+TGG + chr8_2:60801555-60801574 Msa1259240:CDS 35.0%
ACAAAAGCAACAACAAATGG+TGG + chr8_2:60801558-60801577 Msa1259240:CDS 35.0%
TCAGTGATGCTTTGTAAAGA+GGG - chr8_2:60801615-60801634 None:intergenic 35.0%
TTCAGTGATGCTTTGTAAAG+AGG - chr8_2:60801616-60801635 None:intergenic 35.0%
GATTCAAAACTCATATCAGC+TGG - chr8_2:60801643-60801662 None:intergenic 35.0%
ACATGATTGCTTAGATCTGT+GGG + chr8_2:60801688-60801707 Msa1259240:three_prime_UTR 35.0%
TTTCTTCTTCAAGAAGAGGA+AGG - chr8_2:60800461-60800480 None:intergenic 35.0%
AACCAAATGGCAAAGAAGAA+AGG + chr8_2:60800542-60800561 Msa1259240:CDS 35.0%
AACCTTTCTTCTTTGCCATT+TGG - chr8_2:60800547-60800566 None:intergenic 35.0%
GCAAAGAAGAAAGGTTGTAT+TGG + chr8_2:60800551-60800570 Msa1259240:CDS 35.0%
! TTTGGTTTCAGAGGTTACAA+AGG + chr8_2:60800915-60800934 Msa1259240:intron 35.0%
TTGGTTTCAGAGGTTACAAA+GGG + chr8_2:60800916-60800935 Msa1259240:intron 35.0%
!!! TTTGACTTTTGTGCTGATTC+TGG - chr8_2:60800985-60801004 None:intergenic 35.0%
TCTTGCAGATTCAATCAACA+TGG - chr8_2:60801115-60801134 None:intergenic 35.0%
TACTGTTCATAAGAAGGAGT+TGG - chr8_2:60801192-60801211 None:intergenic 35.0%
AATCTGAAAGACATGAGTCA+AGG + chr8_2:60801535-60801554 Msa1259240:CDS 35.0%
AGGACAAAAGCAACAACAAA+TGG + chr8_2:60801555-60801574 Msa1259240:CDS 35.0%
ACAAAAGCAACAACAAATGG+TGG + chr8_2:60801558-60801577 Msa1259240:CDS 35.0%
TCAGTGATGCTTTGTAAAGA+GGG - chr8_2:60801615-60801634 None:intergenic 35.0%
TTCAGTGATGCTTTGTAAAG+AGG - chr8_2:60801616-60801635 None:intergenic 35.0%
GATTCAAAACTCATATCAGC+TGG - chr8_2:60801643-60801662 None:intergenic 35.0%
ACATGATTGCTTAGATCTGT+GGG + chr8_2:60801688-60801707 Msa1259240:three_prime_UTR 35.0%
CTTGTGATACAGCAACCAAA+TGG + chr8_2:60800529-60800548 Msa1259240:CDS 40.0%
ATCACTTCACTAGCAGTAAC+TGG - chr8_2:60800577-60800596 None:intergenic 40.0%
GAAGAGCAACATAGTGATCA+GGG - chr8_2:60800609-60800628 None:intergenic 40.0%
AGAAGAGCAACATAGTGATC+AGG - chr8_2:60800610-60800629 None:intergenic 40.0%
! CCAAGCAAAAGTGTATCTGT+TGG - chr8_2:60800754-60800773 None:intergenic 40.0%
! CCAACAGATACACTTTTGCT+TGG + chr8_2:60800751-60800770 Msa1259240:CDS 40.0%
TATAGACTCATCTCAGCTCA+AGG + chr8_2:60800781-60800800 Msa1259240:CDS 40.0%
! AGAGGTTACAAAGGGTATGT+GGG + chr8_2:60800924-60800943 Msa1259240:intron 40.0%
GTCTGAACCTGAAGATAACA+AGG + chr8_2:60801044-60801063 Msa1259240:CDS 40.0%
CCTTGCTACTACAAAGTCAA+TGG - chr8_2:60801417-60801436 None:intergenic 40.0%
!! CCATTGACTTTGTAGTAGCA+AGG + chr8_2:60801414-60801433 Msa1259240:intron 40.0%
TACTCACATGTGATGACTCA+AGG + chr8_2:60801664-60801683 Msa1259240:three_prime_UTR 40.0%
ACTCACATGTGATGACTCAA+GGG + chr8_2:60801665-60801684 Msa1259240:three_prime_UTR 40.0%
GACATGATTGCTTAGATCTG+TGG + chr8_2:60801687-60801706 Msa1259240:three_prime_UTR 40.0%
CTTGTGATACAGCAACCAAA+TGG + chr8_2:60800529-60800548 Msa1259240:CDS 40.0%
ATCACTTCACTAGCAGTAAC+TGG - chr8_2:60800577-60800596 None:intergenic 40.0%
GAAGAGCAACATAGTGATCA+GGG - chr8_2:60800609-60800628 None:intergenic 40.0%
AGAAGAGCAACATAGTGATC+AGG - chr8_2:60800610-60800629 None:intergenic 40.0%
! CCAAGCAAAAGTGTATCTGT+TGG - chr8_2:60800754-60800773 None:intergenic 40.0%
! CCAACAGATACACTTTTGCT+TGG + chr8_2:60800751-60800770 Msa1259240:CDS 40.0%
TATAGACTCATCTCAGCTCA+AGG + chr8_2:60800781-60800800 Msa1259240:CDS 40.0%
! AGAGGTTACAAAGGGTATGT+GGG + chr8_2:60800924-60800943 Msa1259240:intron 40.0%
GTCTGAACCTGAAGATAACA+AGG + chr8_2:60801044-60801063 Msa1259240:CDS 40.0%
CCTTGCTACTACAAAGTCAA+TGG - chr8_2:60801417-60801436 None:intergenic 40.0%
!! CCATTGACTTTGTAGTAGCA+AGG + chr8_2:60801414-60801433 Msa1259240:intron 40.0%
TACTCACATGTGATGACTCA+AGG + chr8_2:60801664-60801683 Msa1259240:three_prime_UTR 40.0%
ACTCACATGTGATGACTCAA+GGG + chr8_2:60801665-60801684 Msa1259240:three_prime_UTR 40.0%
GACATGATTGCTTAGATCTG+TGG + chr8_2:60801687-60801706 Msa1259240:three_prime_UTR 40.0%
ACTAGTGGTAAGAGAGTGAG+TGG + chr8_2:60800371-60800390 Msa1259240:five_prime_UTR 45.0%
! CAGAGGTTACAAAGGGTATG+TGG + chr8_2:60800923-60800942 Msa1259240:intron 45.0%
!! GAGGCTTCAAGTTGCTGAAA+GGG - chr8_2:60801780-60801799 None:intergenic 45.0%
!! TGAGGCTTCAAGTTGCTGAA+AGG - chr8_2:60801781-60801800 None:intergenic 45.0%
ACTAGTGGTAAGAGAGTGAG+TGG + chr8_2:60800371-60800390 Msa1259240:five_prime_UTR 45.0%
! CAGAGGTTACAAAGGGTATG+TGG + chr8_2:60800923-60800942 Msa1259240:intron 45.0%
!! GAGGCTTCAAGTTGCTGAAA+GGG - chr8_2:60801780-60801799 None:intergenic 45.0%
!! TGAGGCTTCAAGTTGCTGAA+AGG - chr8_2:60801781-60801800 None:intergenic 45.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 60800342 60801913 60800342 ID=Msa1259240;Name=Msa1259240
chr8_2 mRNA 60800342 60801913 60800342 ID=Msa1259240-mRNA-1;Parent=Msa1259240;Name=Msa1259240-mRNA-1;_AED=0.19;_eAED=0.19;_QI=154|1|1|1|1|1|3|266|188
chr8_2 exon 60800342 60800802 60800342 ID=Msa1259240-mRNA-1:exon:19081;Parent=Msa1259240-mRNA-1
chr8_2 exon 60800926 60801065 60800926 ID=Msa1259240-mRNA-1:exon:19082;Parent=Msa1259240-mRNA-1
chr8_2 exon 60801528 60801913 60801528 ID=Msa1259240-mRNA-1:exon:19083;Parent=Msa1259240-mRNA-1
chr8_2 five_prime_UTR 60800342 60800495 60800342 ID=Msa1259240-mRNA-1:five_prime_utr;Parent=Msa1259240-mRNA-1
chr8_2 CDS 60800496 60800802 60800496 ID=Msa1259240-mRNA-1:cds;Parent=Msa1259240-mRNA-1
chr8_2 CDS 60800926 60801065 60800926 ID=Msa1259240-mRNA-1:cds;Parent=Msa1259240-mRNA-1
chr8_2 CDS 60801528 60801647 60801528 ID=Msa1259240-mRNA-1:cds;Parent=Msa1259240-mRNA-1
chr8_2 three_prime_UTR 60801648 60801913 60801648 ID=Msa1259240-mRNA-1:three_prime_utr;Parent=Msa1259240-mRNA-1
Gene Sequence

>Msa1259240

ATGGGAAATTGTCAAGCTATTGATACAGCAACTCTTGTGATACAGCAACCAAATGGCAAAGAAGAAAGGTTGTATTGGCCAGTTACTGCTAGTGAAGTGATGAAGACACACCCTGATCACTATGTTGCTCTTCTTATCTCCACAACATTATGCACTTCAAAAGACAAAGAAAATTGTTCAAATAAGAGCAGCGACAACAACAACGACGACAACAACAACAACAAAGTTCGTATTACACGTATAAAACTTCTTAAGCCAACAGATACACTTTTGCTTGGTCAAGTTTATAGACTCATCTCAGCTCAAGAGGTTACAAAGGGTATGTGGGCTAAGAAACAAGCAAAGATGAAGAGAAACTCTTTGCCAGAATCAGCACAAAAGTCAAATCAGATTAAGGAAAGGATTAATGATAAAACAGCTAATAGGTCTGAACCTGAAGATAACAAGGAAACAAAATCTGAAAGACATGAGTCAAGGACAAAAGCAACAACAAATGGTGGCAATCATAATAATAAGTCAAGAACATGGCAACCCTCTTTACAAAGCATCACTGAATCTGCCAGCTGA
Protein sequence

>Msa1259240

MGNCQAIDTATLVIQQPNGKEERLYWPVTASEVMKTHPDHYVALLISTTLCTSKDKENCSNKSSDNNNDDNNNNKVRITRIKLLKPTDTLLLGQVYRLISAQEVTKGMWAKKQAKMKRNSLPESAQKSNQIKERINDKTANRSEPEDNKETKSERHESRTKATTNGGNHNNKSRTWQPSLQSITESAS*