AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1210860

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1210860 MtrunA17_Chr4g0059361 97.340 188 4 1 1 188 1 187 2.69e-134 373
Msa1210860 MtrunA17_Chr3g0117971 54.974 191 75 3 1 188 1 183 2.41e-63 193
Msa1210860 MtrunA17_Chr5g0414281 42.328 189 87 4 1 186 1 170 6.96e-40 133
Msa1210860 MtrunA17_Chr4g0054191 38.624 189 94 4 1 188 1 168 6.40e-35 120
Msa1210860 MtrunA17_Chr8g0364591 38.378 185 99 4 1 185 1 170 4.13e-30 108
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1210860 AT5G62900.1 46.809 188 73 4 1 188 1 161 9.32e-48 153
Msa1210860 AT5G50090.1 44.444 189 73 4 1 188 1 158 6.64e-42 139
Msa1210860 AT5G50090.2 46.277 188 65 5 1 188 1 152 2.77e-41 137
Msa1210860 AT1G60010.1 41.489 188 95 4 1 188 1 173 1.26e-40 135
Msa1210860 AT5G50090.3 52.500 120 43 1 1 120 1 106 1.13e-35 122
Msa1210860 AT1G10530.1 35.638 188 99 3 1 188 1 166 8.72e-35 120
Msa1210860 AT5G67620.1 32.195 205 98 7 1 188 1 181 1.06e-23 92.8

Find 109 sgRNAs with CRISPR-Local

Find 316 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTATTAATCACTTTAAATT+TGG 0.165381 8_1:-70079291 Msa1210860:three_prime_UTR
GAAGGAGAAGTAGTTGAAAA+AGG 0.168731 8_1:+70079048 None:intergenic
TAAGGGCAAAATTCTTAATT+AGG 0.175331 8_1:+70079267 None:intergenic
TGCATTTCATCCCTGTAATT+AGG 0.175438 8_1:-70079368 Msa1210860:three_prime_UTR
ATCTGTGGGAAATTAAATTA+AGG 0.228969 8_1:-70079399 Msa1210860:three_prime_UTR
GTTTCGTCTTCTCATGTTTC+CGG 0.232857 8_1:-70078671 Msa1210860:three_prime_UTR
ACTTGTTGGGATTTAGAAAT+TGG 0.236727 8_1:-70078561 Msa1210860:three_prime_UTR
GCATTTCATCCCTGTAATTA+GGG 0.241125 8_1:-70079367 Msa1210860:three_prime_UTR
TTAAAGTGATTAATAATTAC+AGG 0.275595 8_1:+70079297 None:intergenic
CCTCCTTCACTTCACTTCTC+TGG 0.278732 8_1:-70079173 Msa1210860:three_prime_UTR
ACGTGTCTCAGATTTCATTA+AGG 0.285739 8_1:+70079249 None:intergenic
GAGGAAGGATATAAATAATA+AGG 0.287758 8_1:+70080655 None:intergenic
GACGATTTCGATTCTGATTC+CGG 0.302020 8_1:-70078730 Msa1210860:three_prime_UTR
AACCTTTCTTCTTTGCCATT+TGG 0.302263 8_1:+70080554 None:intergenic
ACAAAAGTCAAATCAGATTA+AGG 0.303462 8_1:-70080105 Msa1210860:CDS
TTCCACCGCCGGAGGTTGTT+GGG 0.305016 8_1:+70078792 None:intergenic
TTCAAATGACCCCTAATTAC+AGG 0.309823 8_1:+70079357 None:intergenic
AATGACCCAAATGCAAAATA+TGG 0.311728 8_1:+70078605 None:intergenic
TAATAATTACAGGGATGAAA+TGG 0.325643 8_1:+70079307 None:intergenic
CGTGTCTCAGATTTCATTAA+GGG 0.327473 8_1:+70079250 None:intergenic
TTTCCACCGCCGGAGGTTGT+TGG 0.355496 8_1:+70078791 None:intergenic
AGATTTACCTTGTTATCTTC+AGG 0.363890 8_1:+70080047 None:intergenic
ACATTGGAAAATTCTAGTTC+AGG 0.365363 8_1:+70078965 None:intergenic
CGGCACGGTGGCGGCGGTGG+TGG 0.368020 8_1:-70078651 Msa1210860:three_prime_UTR
TTAATGATAAAACAGCTAAT+AGG 0.376595 8_1:-70080076 Msa1210860:CDS
GGTGGCGGCGGTGGTGGTGA+TGG 0.390206 8_1:-70078645 Msa1210860:three_prime_UTR
TTCCGGCACGGTGGCGGCGG+TGG 0.401783 8_1:-70078654 Msa1210860:three_prime_UTR
ATCACTTCACTAGCAGTAAC+TGG 0.406024 8_1:+70080524 None:intergenic
ATTGTTTCTTGTGTCAAGTA+AGG 0.406562 8_1:-70078585 Msa1210860:three_prime_UTR
CGGTCGGCGGTTTCCACCGC+CGG 0.413698 8_1:+70078781 None:intergenic
ACAACAACAACGTCATCTTC+TGG 0.415357 8_1:-70078937 Msa1210860:three_prime_UTR
AGAAGAGCAACATAGTGATC+AGG 0.427746 8_1:+70080491 None:intergenic
AATAATTACAGGGATGAAAT+GGG 0.438337 8_1:+70079308 None:intergenic
CATTGGAAAATTCTAGTTCA+GGG 0.442928 8_1:+70078966 None:intergenic
CAACAACAACGTCATCTTCT+GGG 0.443210 8_1:-70078936 Msa1210860:three_prime_UTR
TCTGTGGGAAATTAAATTAA+GGG 0.443932 8_1:-70079398 Msa1210860:three_prime_UTR
CTACAAGTAAGTGAAGGATC+AGG 0.455787 8_1:+70078693 None:intergenic
CAGAGGTTACAAAGGGTATG+TGG 0.456771 8_1:-70080175 Msa1210860:CDS
TCATGTTTCCGGCACGGTGG+CGG 0.467660 8_1:-70078660 Msa1210860:three_prime_UTR
AGATGAACATAGGGGTAGAC+AGG 0.468639 8_1:+70079209 None:intergenic
TTCAGTGATGCTTTGTAAAG+AGG 0.477664 8_1:+70079488 None:intergenic
GCAAAGAAGAAAGGTTGTAT+TGG 0.478560 8_1:-70080547 Msa1210860:CDS
TGTCAAGTAAGGAACTTGTT+GGG 0.479149 8_1:-70078574 Msa1210860:three_prime_UTR
TCCCCAACAACCTCCGGCGG+TGG 0.479641 8_1:-70078794 Msa1210860:three_prime_UTR
GTGTCAAGTAAGGAACTTGT+TGG 0.482790 8_1:-70078575 Msa1210860:three_prime_UTR
CACCACCGCCGCCACCGTGC+CGG 0.484275 8_1:+70078652 None:intergenic
ATGGGAGGATTAGTAAGCTC+AGG 0.484705 8_1:+70079326 None:intergenic
GAAATCGTCGGAGTGAGCTT+AGG 0.485708 8_1:+70078744 None:intergenic
AGGACAAAAGCAACAACAAA+TGG 0.492369 8_1:-70079546 Msa1210860:CDS
TGTTTCCGGCACGGTGGCGG+CGG 0.505907 8_1:-70078657 Msa1210860:three_prime_UTR
TTTGTGTCCCCAACAACCTC+CGG 0.512164 8_1:-70078800 Msa1210860:three_prime_UTR
TCAGTGATGCTTTGTAAAGA+GGG 0.514695 8_1:+70079489 None:intergenic
GTTGCTATAAATATTCTAGT+AGG 0.517379 8_1:-70080705 Msa1210860:five_prime_UTR
TCCACCGCCGGAGGTTGTTG+GGG 0.517578 8_1:+70078793 None:intergenic
AACCAAATGGCAAAGAAGAA+AGG 0.522282 8_1:-70080556 Msa1210860:CDS
CCAGAGAAGTGAAGTGAAGG+AGG 0.526333 8_1:+70079173 None:intergenic
TACTCACATGTGATGACTCA+AGG 0.527011 8_1:-70079437 Msa1210860:three_prime_UTR
TTTGACTCTTTGAAAACTAG+TGG 0.528818 8_1:-70080742 Msa1210860:five_prime_UTR
TTGGTTTCAGAGGTTACAAA+GGG 0.536135 8_1:-70080182 Msa1210860:intron
TCAGGGAGGGAACTCAGAAC+CGG 0.537465 8_1:+70078711 None:intergenic
GATTCAAAACTCATATCAGC+TGG 0.538326 8_1:+70079461 None:intergenic
TTGATGAGGAAATCAATTGA+AGG 0.541033 8_1:+70079030 None:intergenic
ACTAGTGGTAAGAGAGTGAG+TGG 0.541714 8_1:-70080727 Msa1210860:five_prime_UTR
CTTGTGATACAGCAACCAAA+TGG 0.541988 8_1:-70080569 Msa1210860:CDS
ACATGATTGCTTAGATCTGT+GGG 0.557047 8_1:-70079413 Msa1210860:three_prime_UTR
GACATGATTGCTTAGATCTG+TGG 0.558047 8_1:-70079414 Msa1210860:three_prime_UTR
TTTCTTCTTCAAGAAGAGGA+AGG 0.558868 8_1:+70080640 None:intergenic
GTCTTCTCATGTTTCCGGCA+CGG 0.562757 8_1:-70078666 Msa1210860:three_prime_UTR
GTGAGCTTAGGTAGACGGAA+AGG 0.568945 8_1:+70078756 None:intergenic
TGAGCTTAGGTAGACGGAAA+GGG 0.574700 8_1:+70078757 None:intergenic
GAAGAGCAACATAGTGATCA+GGG 0.575247 8_1:+70080492 None:intergenic
CCAAGCAAAAGTGTATCTGT+TGG 0.576593 8_1:+70080347 None:intergenic
TACAAGTAAGTGAAGGATCA+GGG 0.577021 8_1:+70078694 None:intergenic
GTTCCAGAGAAGTGAAGTGA+AGG 0.577749 8_1:+70079170 None:intergenic
CCAAATGCAAAATATGGCTA+CGG 0.579931 8_1:+70078611 None:intergenic
TTTGGTTTCAGAGGTTACAA+AGG 0.584060 8_1:-70080183 Msa1210860:intron
AGAGGTTACAAAGGGTATGT+GGG 0.585748 8_1:-70080174 Msa1210860:CDS
TCGGAGTGAGCTTAGGTAGA+CGG 0.588237 8_1:+70078751 None:intergenic
AGACGGAAAGGGACGGTCGG+CGG 0.591139 8_1:+70078768 None:intergenic
TAAAGTGATTAATAATTACA+GGG 0.593348 8_1:+70079298 None:intergenic
TATAGACTCATCTCAGCTCA+AGG 0.593800 8_1:-70080317 Msa1210860:intron
AAATAATAAGGAAGATGCAA+CGG 0.598797 8_1:+70080667 None:intergenic
TCAAATGACCCCTAATTACA+GGG 0.604479 8_1:+70079358 None:intergenic
TGGATCTATCCACAACCACA+AGG 0.605488 8_1:+70079115 None:intergenic
GTCTGAACCTGAAGATAACA+AGG 0.608807 8_1:-70080054 Msa1210860:intron
TGAAGCACTGCATATTGATG+AGG 0.609628 8_1:+70079016 None:intergenic
CTTAGGTAGACGGAAAGGGA+CGG 0.618125 8_1:+70078761 None:intergenic
AGTCAAATCAGATTAAGGAA+AGG 0.621653 8_1:-70080100 Msa1210860:CDS
CATTTCATCCCTGTAATTAG+GGG 0.623909 8_1:-70079366 Msa1210860:three_prime_UTR
CAGAGAAGTGAAGTGAAGGA+GGG 0.625228 8_1:+70079174 None:intergenic
ACTCACATGTGATGACTCAA+GGG 0.627657 8_1:-70079436 Msa1210860:three_prime_UTR
AGTAAGTGAAGGATCAGGGA+GGG 0.629875 8_1:+70078698 None:intergenic
GTGTCCCCAACAACCTCCGG+CGG 0.630049 8_1:-70078797 Msa1210860:three_prime_UTR
TCGGCGGTTTCCACCGCCGG+AGG 0.630883 8_1:+70078784 None:intergenic
TGGGAGGATTAGTAAGCTCA+GGG 0.635180 8_1:+70079327 None:intergenic
AATCTGAAAGACATGAGTCA+AGG 0.637514 8_1:-70079566 Msa1210860:CDS
GATCTATCCACAACCACAAG+GGG 0.639953 8_1:+70079117 None:intergenic
GGTAGACGGAAAGGGACGGT+CGG 0.642297 8_1:+70078765 None:intergenic
GATGAACATAGGGGTAGACA+GGG 0.645678 8_1:+70079210 None:intergenic
ACAAAAGCAACAACAAATGG+TGG 0.646145 8_1:-70079543 Msa1210860:CDS
ACGAAACTACAAGTAAGTGA+AGG 0.651561 8_1:+70078687 None:intergenic
GGAATCAGAATCGAAATCGT+CGG 0.654540 8_1:+70078732 None:intergenic
GGATCTATCCACAACCACAA+GGG 0.657598 8_1:+70079116 None:intergenic
AATTACAGGGATGAAATGGG+AGG 0.666408 8_1:+70079311 None:intergenic
ATAATAATAAGTCAAGAACA+TGG 0.691937 8_1:-70079515 Msa1210860:CDS
TTCTCATGTTTCCGGCACGG+TGG 0.703341 8_1:-70078663 Msa1210860:three_prime_UTR
AAGTAAGTGAAGGATCAGGG+AGG 0.735147 8_1:+70078697 None:intergenic
ATGAACATAGGGGTAGACAG+GGG 0.756859 8_1:+70079211 None:intergenic
GTTGTTGGGGACACAAACGA+CGG 0.759292 8_1:+70078806 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GATTAATAATAATTTATGAT+TGG - chr8_1:70079639-70079658 Msa1210860:intron 10.0%
!! ATTATTAATCACTTTAAATT+TGG - chr8_1:70079958-70079977 Msa1210860:intron 10.0%
!! GATTAATAATAATTTATGAT+TGG - chr8_1:70079639-70079658 Msa1210860:intron 10.0%
!! ATTATTAATCACTTTAAATT+TGG - chr8_1:70079958-70079977 Msa1210860:intron 10.0%
!! TATAAAGAATCAAAAGAAAA+AGG + chr8_1:70078988-70079007 None:intergenic 15.0%
!!! AGAACAAAATAATCTTTTAA+GGG + chr8_1:70079021-70079040 None:intergenic 15.0%
!!! AAGAACAAAATAATCTTTTA+AGG + chr8_1:70079022-70079041 None:intergenic 15.0%
!!! TACACATTGATTATTTTTTT+TGG - chr8_1:70079395-70079414 Msa1210860:three_prime_UTR 15.0%
!! GATAATGCATAATATATATA+AGG + chr8_1:70079434-70079453 None:intergenic 15.0%
!! TTATGTACATTAACTAATTA+AGG - chr8_1:70079492-70079511 Msa1210860:CDS 15.0%
!! TAAAGTGATTAATAATTACA+GGG + chr8_1:70079954-70079973 None:intergenic 15.0%
!! TTAAAGTGATTAATAATTAC+AGG + chr8_1:70079955-70079974 None:intergenic 15.0%
!! AAAAAGAAAAGAAAAGAAAT+TGG - chr8_1:70080745-70080764 Msa1210860:five_prime_UTR 15.0%
!! TATAAAGAATCAAAAGAAAA+AGG + chr8_1:70078988-70079007 None:intergenic 15.0%
!!! AGAACAAAATAATCTTTTAA+GGG + chr8_1:70079021-70079040 None:intergenic 15.0%
!!! AAGAACAAAATAATCTTTTA+AGG + chr8_1:70079022-70079041 None:intergenic 15.0%
!!! TACACATTGATTATTTTTTT+TGG - chr8_1:70079395-70079414 Msa1210860:three_prime_UTR 15.0%
!! GATAATGCATAATATATATA+AGG + chr8_1:70079434-70079453 None:intergenic 15.0%
!! TTATGTACATTAACTAATTA+AGG - chr8_1:70079492-70079511 Msa1210860:CDS 15.0%
!! TAAAGTGATTAATAATTACA+GGG + chr8_1:70079954-70079973 None:intergenic 15.0%
!! TTAAAGTGATTAATAATTAC+AGG + chr8_1:70079955-70079974 None:intergenic 15.0%
!! AAAAAGAAAAGAAAAGAAAT+TGG - chr8_1:70080745-70080764 Msa1210860:five_prime_UTR 15.0%
!! TTAATGATAAAACAGCTAAT+AGG - chr8_1:70079173-70079192 Msa1210860:three_prime_UTR 20.0%
!! CATAATATATATAAGGTTTG+AGG + chr8_1:70079427-70079446 None:intergenic 20.0%
!! ATAATAATAAGTCAAGAACA+TGG - chr8_1:70079734-70079753 Msa1210860:intron 20.0%
!!! AACAATTTTTTACATCACTA+AGG - chr8_1:70080354-70080373 Msa1210860:CDS 20.0%
!! TTAATGATAAAACAGCTAAT+AGG - chr8_1:70079173-70079192 Msa1210860:three_prime_UTR 20.0%
!! CATAATATATATAAGGTTTG+AGG + chr8_1:70079427-70079446 None:intergenic 20.0%
!! ATAATAATAAGTCAAGAACA+TGG - chr8_1:70079734-70079753 Msa1210860:intron 20.0%
!!! AACAATTTTTTACATCACTA+AGG - chr8_1:70080354-70080373 Msa1210860:CDS 20.0%
! GTTGCTATAAATATTCTAGT+AGG - chr8_1:70078544-70078563 Msa1210860:three_prime_UTR 25.0%
! AAATAATAAGGAAGATGCAA+CGG + chr8_1:70078585-70078604 None:intergenic 25.0%
! GAGGAAGGATATAAATAATA+AGG + chr8_1:70078597-70078616 None:intergenic 25.0%
! AAAAAGAAGTGAGAGATAAT+GGG - chr8_1:70078629-70078648 Msa1210860:three_prime_UTR 25.0%
!!! TTGAGTCTTTATGTTGTTTT+TGG - chr8_1:70079048-70079067 Msa1210860:three_prime_UTR 25.0%
! ACAAAAGTCAAATCAGATTA+AGG - chr8_1:70079144-70079163 Msa1210860:three_prime_UTR 25.0%
! TATAGTTACTGTTCATAAGA+AGG + chr8_1:70079349-70079368 None:intergenic 25.0%
! TACATTAACTAATTAAGGTC+TGG - chr8_1:70079497-70079516 Msa1210860:CDS 25.0%
!! GGTCTGGTTATAAATTTTAT+TGG - chr8_1:70079513-70079532 Msa1210860:CDS 25.0%
!!! ATGATTGGTTCATTATTTTC+AGG - chr8_1:70079654-70079673 Msa1210860:intron 25.0%
! ATCTGTGGGAAATTAAATTA+AGG - chr8_1:70079850-70079869 Msa1210860:intron 25.0%
! TCTGTGGGAAATTAAATTAA+GGG - chr8_1:70079851-70079870 Msa1210860:intron 25.0%
! AATAATTACAGGGATGAAAT+GGG + chr8_1:70079944-70079963 None:intergenic 25.0%
! TAATAATTACAGGGATGAAA+TGG + chr8_1:70079945-70079964 None:intergenic 25.0%
! TAAGGGCAAAATTCTTAATT+AGG + chr8_1:70079985-70080004 None:intergenic 25.0%
!!! ATTTTGAGAAGATGAACATA+GGG + chr8_1:70080052-70080071 None:intergenic 25.0%
!!! TTTTTTAAAGTTCTTTTGGG+AGG + chr8_1:70080112-70080131 None:intergenic 25.0%
!!! GGGTTTTTTAAAGTTCTTTT+GGG + chr8_1:70080115-70080134 None:intergenic 25.0%
!!! AAAACCATGTGTTTTTTTGT+AGG + chr8_1:70080162-70080181 None:intergenic 25.0%
!!! GAAATTGGTGTTTTAGAAAT+TGG - chr8_1:70080703-70080722 Msa1210860:five_prime_UTR 25.0%
! GTTGCTATAAATATTCTAGT+AGG - chr8_1:70078544-70078563 Msa1210860:three_prime_UTR 25.0%
! AAATAATAAGGAAGATGCAA+CGG + chr8_1:70078585-70078604 None:intergenic 25.0%
! GAGGAAGGATATAAATAATA+AGG + chr8_1:70078597-70078616 None:intergenic 25.0%
! AAAAAGAAGTGAGAGATAAT+GGG - chr8_1:70078629-70078648 Msa1210860:three_prime_UTR 25.0%
!!! TTGAGTCTTTATGTTGTTTT+TGG - chr8_1:70079048-70079067 Msa1210860:three_prime_UTR 25.0%
! ACAAAAGTCAAATCAGATTA+AGG - chr8_1:70079144-70079163 Msa1210860:three_prime_UTR 25.0%
! TATAGTTACTGTTCATAAGA+AGG + chr8_1:70079349-70079368 None:intergenic 25.0%
! TACATTAACTAATTAAGGTC+TGG - chr8_1:70079497-70079516 Msa1210860:CDS 25.0%
!! GGTCTGGTTATAAATTTTAT+TGG - chr8_1:70079513-70079532 Msa1210860:CDS 25.0%
!!! ATGATTGGTTCATTATTTTC+AGG - chr8_1:70079654-70079673 Msa1210860:intron 25.0%
! ATCTGTGGGAAATTAAATTA+AGG - chr8_1:70079850-70079869 Msa1210860:intron 25.0%
! TCTGTGGGAAATTAAATTAA+GGG - chr8_1:70079851-70079870 Msa1210860:intron 25.0%
! AATAATTACAGGGATGAAAT+GGG + chr8_1:70079944-70079963 None:intergenic 25.0%
! TAATAATTACAGGGATGAAA+TGG + chr8_1:70079945-70079964 None:intergenic 25.0%
! TAAGGGCAAAATTCTTAATT+AGG + chr8_1:70079985-70080004 None:intergenic 25.0%
!!! ATTTTGAGAAGATGAACATA+GGG + chr8_1:70080052-70080071 None:intergenic 25.0%
!!! TTTTTTAAAGTTCTTTTGGG+AGG + chr8_1:70080112-70080131 None:intergenic 25.0%
!!! GGGTTTTTTAAAGTTCTTTT+GGG + chr8_1:70080115-70080134 None:intergenic 25.0%
!!! AAAACCATGTGTTTTTTTGT+AGG + chr8_1:70080162-70080181 None:intergenic 25.0%
!!! GAAATTGGTGTTTTAGAAAT+TGG - chr8_1:70080703-70080722 Msa1210860:five_prime_UTR 25.0%
! TTTGACTCTTTGAAAACTAG+TGG - chr8_1:70078507-70078526 Msa1210860:three_prime_UTR 30.0%
! TCTTTTTCTTCTTCAAGAAG+AGG + chr8_1:70078616-70078635 None:intergenic 30.0%
GAAAAAGAAGTGAGAGATAA+TGG - chr8_1:70078628-70078647 Msa1210860:three_prime_UTR 30.0%
!!! TTTTGAAGTGCATAATGTTG+TGG + chr8_1:70078789-70078808 None:intergenic 30.0%
!!! TATGTTGTTTTTGGTTTCAG+AGG - chr8_1:70079057-70079076 Msa1210860:three_prime_UTR 30.0%
AGTCAAATCAGATTAAGGAA+AGG - chr8_1:70079149-70079168 Msa1210860:three_prime_UTR 30.0%
! AGATTTACCTTGTTATCTTC+AGG + chr8_1:70079205-70079224 None:intergenic 30.0%
AGATTCAATCAACATGGATT+TGG + chr8_1:70079260-70079279 None:intergenic 30.0%
AAGAACATGAATATCTTCAG+TGG - chr8_1:70079282-70079301 Msa1210860:three_prime_UTR 30.0%
!! TAAGAGAGAGATTTGTTGAA+TGG - chr8_1:70079615-70079634 Msa1210860:intron 30.0%
!! TTTTGAGAAGATGAACATAG+GGG + chr8_1:70080051-70080070 None:intergenic 30.0%
!! GATTTTGAGAAGATGAACAT+AGG + chr8_1:70080053-70080072 None:intergenic 30.0%
!!! GGGGTTTTTTAAAGTTCTTT+TGG + chr8_1:70080116-70080135 None:intergenic 30.0%
!!! CATGTGTTTTTTTGTAGGTA+TGG + chr8_1:70080157-70080176 None:intergenic 30.0%
CATACCTACAAAAAAACACA+TGG - chr8_1:70080155-70080174 Msa1210860:CDS 30.0%
AAGGAGAAGTAGTTGAAAAA+GGG + chr8_1:70080203-70080222 None:intergenic 30.0%
TTGATGAGGAAATCAATTGA+AGG + chr8_1:70080222-70080241 None:intergenic 30.0%
!! CTTCTTCATTTTTCACTTGT+AGG - chr8_1:70080259-70080278 Msa1210860:intron 30.0%
!! CATTGGAAAATTCTAGTTCA+GGG + chr8_1:70080286-70080305 None:intergenic 30.0%
!! ACATTGGAAAATTCTAGTTC+AGG + chr8_1:70080287-70080306 None:intergenic 30.0%
!! GTTGTTGTTGTGTTTTACAT+TGG + chr8_1:70080303-70080322 None:intergenic 30.0%
AATGACCCAAATGCAAAATA+TGG + chr8_1:70080647-70080666 None:intergenic 30.0%
! ATTGTTTCTTGTGTCAAGTA+AGG - chr8_1:70080664-70080683 Msa1210860:five_prime_UTR 30.0%
! ACTTGTTGGGATTTAGAAAT+TGG - chr8_1:70080688-70080707 Msa1210860:five_prime_UTR 30.0%
! TTTGACTCTTTGAAAACTAG+TGG - chr8_1:70078507-70078526 Msa1210860:three_prime_UTR 30.0%
! TCTTTTTCTTCTTCAAGAAG+AGG + chr8_1:70078616-70078635 None:intergenic 30.0%
GAAAAAGAAGTGAGAGATAA+TGG - chr8_1:70078628-70078647 Msa1210860:three_prime_UTR 30.0%
!!! TTTTGAAGTGCATAATGTTG+TGG + chr8_1:70078789-70078808 None:intergenic 30.0%
!!! TATGTTGTTTTTGGTTTCAG+AGG - chr8_1:70079057-70079076 Msa1210860:three_prime_UTR 30.0%
AGTCAAATCAGATTAAGGAA+AGG - chr8_1:70079149-70079168 Msa1210860:three_prime_UTR 30.0%
! AGATTTACCTTGTTATCTTC+AGG + chr8_1:70079205-70079224 None:intergenic 30.0%
AGATTCAATCAACATGGATT+TGG + chr8_1:70079260-70079279 None:intergenic 30.0%
AAGAACATGAATATCTTCAG+TGG - chr8_1:70079282-70079301 Msa1210860:three_prime_UTR 30.0%
!! TAAGAGAGAGATTTGTTGAA+TGG - chr8_1:70079615-70079634 Msa1210860:intron 30.0%
!! TTTTGAGAAGATGAACATAG+GGG + chr8_1:70080051-70080070 None:intergenic 30.0%
!! GATTTTGAGAAGATGAACAT+AGG + chr8_1:70080053-70080072 None:intergenic 30.0%
!!! GGGGTTTTTTAAAGTTCTTT+TGG + chr8_1:70080116-70080135 None:intergenic 30.0%
!!! CATGTGTTTTTTTGTAGGTA+TGG + chr8_1:70080157-70080176 None:intergenic 30.0%
CATACCTACAAAAAAACACA+TGG - chr8_1:70080155-70080174 Msa1210860:CDS 30.0%
AAGGAGAAGTAGTTGAAAAA+GGG + chr8_1:70080203-70080222 None:intergenic 30.0%
TTGATGAGGAAATCAATTGA+AGG + chr8_1:70080222-70080241 None:intergenic 30.0%
!! CTTCTTCATTTTTCACTTGT+AGG - chr8_1:70080259-70080278 Msa1210860:intron 30.0%
!! CATTGGAAAATTCTAGTTCA+GGG + chr8_1:70080286-70080305 None:intergenic 30.0%
!! ACATTGGAAAATTCTAGTTC+AGG + chr8_1:70080287-70080306 None:intergenic 30.0%
!! GTTGTTGTTGTGTTTTACAT+TGG + chr8_1:70080303-70080322 None:intergenic 30.0%
AATGACCCAAATGCAAAATA+TGG + chr8_1:70080647-70080666 None:intergenic 30.0%
! ATTGTTTCTTGTGTCAAGTA+AGG - chr8_1:70080664-70080683 Msa1210860:five_prime_UTR 30.0%
! ACTTGTTGGGATTTAGAAAT+TGG - chr8_1:70080688-70080707 Msa1210860:five_prime_UTR 30.0%
TTTCTTCTTCAAGAAGAGGA+AGG + chr8_1:70078612-70078631 None:intergenic 35.0%
AACCAAATGGCAAAGAAGAA+AGG - chr8_1:70078693-70078712 Msa1210860:three_prime_UTR 35.0%
AACCTTTCTTCTTTGCCATT+TGG + chr8_1:70078698-70078717 None:intergenic 35.0%
GCAAAGAAGAAAGGTTGTAT+TGG - chr8_1:70078702-70078721 Msa1210860:three_prime_UTR 35.0%
! TTTGGTTTCAGAGGTTACAA+AGG - chr8_1:70079066-70079085 Msa1210860:three_prime_UTR 35.0%
TTGGTTTCAGAGGTTACAAA+GGG - chr8_1:70079067-70079086 Msa1210860:three_prime_UTR 35.0%
!!! TTTGACTTTTGTGCTGATTC+TGG + chr8_1:70079136-70079155 None:intergenic 35.0%
TCTTGCAGATTCAATCAACA+TGG + chr8_1:70079266-70079285 None:intergenic 35.0%
TACTGTTCATAAGAAGGAGT+TGG + chr8_1:70079343-70079362 None:intergenic 35.0%
AATCTGAAAGACATGAGTCA+AGG - chr8_1:70079683-70079702 Msa1210860:intron 35.0%
AGGACAAAAGCAACAACAAA+TGG - chr8_1:70079703-70079722 Msa1210860:intron 35.0%
ACAAAAGCAACAACAAATGG+TGG - chr8_1:70079706-70079725 Msa1210860:intron 35.0%
TCAGTGATGCTTTGTAAAGA+GGG + chr8_1:70079763-70079782 None:intergenic 35.0%
TTCAGTGATGCTTTGTAAAG+AGG + chr8_1:70079764-70079783 None:intergenic 35.0%
GATTCAAAACTCATATCAGC+TGG + chr8_1:70079791-70079810 None:intergenic 35.0%
ACATGATTGCTTAGATCTGT+GGG - chr8_1:70079836-70079855 Msa1210860:intron 35.0%
TGCATTTCATCCCTGTAATT+AGG - chr8_1:70079881-70079900 Msa1210860:intron 35.0%
GCATTTCATCCCTGTAATTA+GGG - chr8_1:70079882-70079901 Msa1210860:intron 35.0%
CATTTCATCCCTGTAATTAG+GGG - chr8_1:70079883-70079902 Msa1210860:intron 35.0%
TCAAATGACCCCTAATTACA+GGG + chr8_1:70079894-70079913 None:intergenic 35.0%
TTCAAATGACCCCTAATTAC+AGG + chr8_1:70079895-70079914 None:intergenic 35.0%
CGTGTCTCAGATTTCATTAA+GGG + chr8_1:70080002-70080021 None:intergenic 35.0%
ACGTGTCTCAGATTTCATTA+AGG + chr8_1:70080003-70080022 None:intergenic 35.0%
!! AAAGTTCTTTTGGGAGGAAA+TGG + chr8_1:70080106-70080125 None:intergenic 35.0%
! GAACTTTAAAAAACCCCTTG+TGG - chr8_1:70080119-70080138 Msa1210860:CDS 35.0%
GAAGTAGTTGAAAAAGGGTT+TGG + chr8_1:70080198-70080217 None:intergenic 35.0%
GAAGGAGAAGTAGTTGAAAA+AGG + chr8_1:70080204-70080223 None:intergenic 35.0%
TACAAGTAAGTGAAGGATCA+GGG + chr8_1:70080558-70080577 None:intergenic 35.0%
ACGAAACTACAAGTAAGTGA+AGG + chr8_1:70080565-70080584 None:intergenic 35.0%
CCAAATGCAAAATATGGCTA+CGG + chr8_1:70080641-70080660 None:intergenic 35.0%
! CGTAGCCATATTTTGCATTT+GGG - chr8_1:70080639-70080658 Msa1210860:five_prime_UTR 35.0%
! TGTCAAGTAAGGAACTTGTT+GGG - chr8_1:70080675-70080694 Msa1210860:five_prime_UTR 35.0%
TTTCTTCTTCAAGAAGAGGA+AGG + chr8_1:70078612-70078631 None:intergenic 35.0%
AACCAAATGGCAAAGAAGAA+AGG - chr8_1:70078693-70078712 Msa1210860:three_prime_UTR 35.0%
AACCTTTCTTCTTTGCCATT+TGG + chr8_1:70078698-70078717 None:intergenic 35.0%
GCAAAGAAGAAAGGTTGTAT+TGG - chr8_1:70078702-70078721 Msa1210860:three_prime_UTR 35.0%
! TTTGGTTTCAGAGGTTACAA+AGG - chr8_1:70079066-70079085 Msa1210860:three_prime_UTR 35.0%
TTGGTTTCAGAGGTTACAAA+GGG - chr8_1:70079067-70079086 Msa1210860:three_prime_UTR 35.0%
!!! TTTGACTTTTGTGCTGATTC+TGG + chr8_1:70079136-70079155 None:intergenic 35.0%
TCTTGCAGATTCAATCAACA+TGG + chr8_1:70079266-70079285 None:intergenic 35.0%
TACTGTTCATAAGAAGGAGT+TGG + chr8_1:70079343-70079362 None:intergenic 35.0%
AATCTGAAAGACATGAGTCA+AGG - chr8_1:70079683-70079702 Msa1210860:intron 35.0%
AGGACAAAAGCAACAACAAA+TGG - chr8_1:70079703-70079722 Msa1210860:intron 35.0%
ACAAAAGCAACAACAAATGG+TGG - chr8_1:70079706-70079725 Msa1210860:intron 35.0%
TCAGTGATGCTTTGTAAAGA+GGG + chr8_1:70079763-70079782 None:intergenic 35.0%
TTCAGTGATGCTTTGTAAAG+AGG + chr8_1:70079764-70079783 None:intergenic 35.0%
GATTCAAAACTCATATCAGC+TGG + chr8_1:70079791-70079810 None:intergenic 35.0%
ACATGATTGCTTAGATCTGT+GGG - chr8_1:70079836-70079855 Msa1210860:intron 35.0%
TGCATTTCATCCCTGTAATT+AGG - chr8_1:70079881-70079900 Msa1210860:intron 35.0%
GCATTTCATCCCTGTAATTA+GGG - chr8_1:70079882-70079901 Msa1210860:intron 35.0%
CATTTCATCCCTGTAATTAG+GGG - chr8_1:70079883-70079902 Msa1210860:intron 35.0%
TCAAATGACCCCTAATTACA+GGG + chr8_1:70079894-70079913 None:intergenic 35.0%
TTCAAATGACCCCTAATTAC+AGG + chr8_1:70079895-70079914 None:intergenic 35.0%
CGTGTCTCAGATTTCATTAA+GGG + chr8_1:70080002-70080021 None:intergenic 35.0%
ACGTGTCTCAGATTTCATTA+AGG + chr8_1:70080003-70080022 None:intergenic 35.0%
!! AAAGTTCTTTTGGGAGGAAA+TGG + chr8_1:70080106-70080125 None:intergenic 35.0%
! GAACTTTAAAAAACCCCTTG+TGG - chr8_1:70080119-70080138 Msa1210860:CDS 35.0%
GAAGTAGTTGAAAAAGGGTT+TGG + chr8_1:70080198-70080217 None:intergenic 35.0%
GAAGGAGAAGTAGTTGAAAA+AGG + chr8_1:70080204-70080223 None:intergenic 35.0%
TACAAGTAAGTGAAGGATCA+GGG + chr8_1:70080558-70080577 None:intergenic 35.0%
ACGAAACTACAAGTAAGTGA+AGG + chr8_1:70080565-70080584 None:intergenic 35.0%
CCAAATGCAAAATATGGCTA+CGG + chr8_1:70080641-70080660 None:intergenic 35.0%
! CGTAGCCATATTTTGCATTT+GGG - chr8_1:70080639-70080658 Msa1210860:five_prime_UTR 35.0%
! TGTCAAGTAAGGAACTTGTT+GGG - chr8_1:70080675-70080694 Msa1210860:five_prime_UTR 35.0%
CTTGTGATACAGCAACCAAA+TGG - chr8_1:70078680-70078699 Msa1210860:three_prime_UTR 40.0%
ATCACTTCACTAGCAGTAAC+TGG + chr8_1:70078728-70078747 None:intergenic 40.0%
GAAGAGCAACATAGTGATCA+GGG + chr8_1:70078760-70078779 None:intergenic 40.0%
AGAAGAGCAACATAGTGATC+AGG + chr8_1:70078761-70078780 None:intergenic 40.0%
! CCAAGCAAAAGTGTATCTGT+TGG + chr8_1:70078905-70078924 None:intergenic 40.0%
! CCAACAGATACACTTTTGCT+TGG - chr8_1:70078902-70078921 Msa1210860:three_prime_UTR 40.0%
TATAGACTCATCTCAGCTCA+AGG - chr8_1:70078932-70078951 Msa1210860:three_prime_UTR 40.0%
! AGAGGTTACAAAGGGTATGT+GGG - chr8_1:70079075-70079094 Msa1210860:three_prime_UTR 40.0%
GTCTGAACCTGAAGATAACA+AGG - chr8_1:70079195-70079214 Msa1210860:three_prime_UTR 40.0%
CCTTGCTACTACAAAGTCAA+TGG + chr8_1:70079565-70079584 None:intergenic 40.0%
!! CCATTGACTTTGTAGTAGCA+AGG - chr8_1:70079562-70079581 Msa1210860:CDS 40.0%
TACTCACATGTGATGACTCA+AGG - chr8_1:70079812-70079831 Msa1210860:intron 40.0%
ACTCACATGTGATGACTCAA+GGG - chr8_1:70079813-70079832 Msa1210860:intron 40.0%
GACATGATTGCTTAGATCTG+TGG - chr8_1:70079835-70079854 Msa1210860:intron 40.0%
AATTACAGGGATGAAATGGG+AGG + chr8_1:70079941-70079960 None:intergenic 40.0%
TAAAAAACCCCTTGTGGTTG+TGG - chr8_1:70080125-70080144 Msa1210860:CDS 40.0%
! GTTGAAAAAGGGTTTGGTAG+TGG + chr8_1:70080192-70080211 None:intergenic 40.0%
!! TGAAGCACTGCATATTGATG+AGG + chr8_1:70080236-70080255 None:intergenic 40.0%
ACAACAACAACGTCATCTTC+TGG - chr8_1:70080312-70080331 Msa1210860:intron 40.0%
CAACAACAACGTCATCTTCT+GGG - chr8_1:70080313-70080332 Msa1210860:intron 40.0%
GGAATCAGAATCGAAATCGT+CGG + chr8_1:70080520-70080539 None:intergenic 40.0%
GACGATTTCGATTCTGATTC+CGG - chr8_1:70080519-70080538 Msa1210860:CDS 40.0%
CTACAAGTAAGTGAAGGATC+AGG + chr8_1:70080559-70080578 None:intergenic 40.0%
GTTTCGTCTTCTCATGTTTC+CGG - chr8_1:70080578-70080597 Msa1210860:CDS 40.0%
! CCGTAGCCATATTTTGCATT+TGG - chr8_1:70080638-70080657 Msa1210860:five_prime_UTR 40.0%
GTGTCAAGTAAGGAACTTGT+TGG - chr8_1:70080674-70080693 Msa1210860:five_prime_UTR 40.0%
CTTGTGATACAGCAACCAAA+TGG - chr8_1:70078680-70078699 Msa1210860:three_prime_UTR 40.0%
ATCACTTCACTAGCAGTAAC+TGG + chr8_1:70078728-70078747 None:intergenic 40.0%
GAAGAGCAACATAGTGATCA+GGG + chr8_1:70078760-70078779 None:intergenic 40.0%
AGAAGAGCAACATAGTGATC+AGG + chr8_1:70078761-70078780 None:intergenic 40.0%
! CCAAGCAAAAGTGTATCTGT+TGG + chr8_1:70078905-70078924 None:intergenic 40.0%
! CCAACAGATACACTTTTGCT+TGG - chr8_1:70078902-70078921 Msa1210860:three_prime_UTR 40.0%
TATAGACTCATCTCAGCTCA+AGG - chr8_1:70078932-70078951 Msa1210860:three_prime_UTR 40.0%
! AGAGGTTACAAAGGGTATGT+GGG - chr8_1:70079075-70079094 Msa1210860:three_prime_UTR 40.0%
GTCTGAACCTGAAGATAACA+AGG - chr8_1:70079195-70079214 Msa1210860:three_prime_UTR 40.0%
CCTTGCTACTACAAAGTCAA+TGG + chr8_1:70079565-70079584 None:intergenic 40.0%
!! CCATTGACTTTGTAGTAGCA+AGG - chr8_1:70079562-70079581 Msa1210860:CDS 40.0%
TACTCACATGTGATGACTCA+AGG - chr8_1:70079812-70079831 Msa1210860:intron 40.0%
ACTCACATGTGATGACTCAA+GGG - chr8_1:70079813-70079832 Msa1210860:intron 40.0%
GACATGATTGCTTAGATCTG+TGG - chr8_1:70079835-70079854 Msa1210860:intron 40.0%
AATTACAGGGATGAAATGGG+AGG + chr8_1:70079941-70079960 None:intergenic 40.0%
TAAAAAACCCCTTGTGGTTG+TGG - chr8_1:70080125-70080144 Msa1210860:CDS 40.0%
! GTTGAAAAAGGGTTTGGTAG+TGG + chr8_1:70080192-70080211 None:intergenic 40.0%
!! TGAAGCACTGCATATTGATG+AGG + chr8_1:70080236-70080255 None:intergenic 40.0%
ACAACAACAACGTCATCTTC+TGG - chr8_1:70080312-70080331 Msa1210860:intron 40.0%
CAACAACAACGTCATCTTCT+GGG - chr8_1:70080313-70080332 Msa1210860:intron 40.0%
GGAATCAGAATCGAAATCGT+CGG + chr8_1:70080520-70080539 None:intergenic 40.0%
GACGATTTCGATTCTGATTC+CGG - chr8_1:70080519-70080538 Msa1210860:CDS 40.0%
CTACAAGTAAGTGAAGGATC+AGG + chr8_1:70080559-70080578 None:intergenic 40.0%
GTTTCGTCTTCTCATGTTTC+CGG - chr8_1:70080578-70080597 Msa1210860:CDS 40.0%
! CCGTAGCCATATTTTGCATT+TGG - chr8_1:70080638-70080657 Msa1210860:five_prime_UTR 40.0%
GTGTCAAGTAAGGAACTTGT+TGG - chr8_1:70080674-70080693 Msa1210860:five_prime_UTR 40.0%
ACTAGTGGTAAGAGAGTGAG+TGG - chr8_1:70078522-70078541 Msa1210860:three_prime_UTR 45.0%
! CAGAGGTTACAAAGGGTATG+TGG - chr8_1:70079074-70079093 Msa1210860:three_prime_UTR 45.0%
! TGGGAGGATTAGTAAGCTCA+GGG + chr8_1:70079925-70079944 None:intergenic 45.0%
! ATGGGAGGATTAGTAAGCTC+AGG + chr8_1:70079926-70079945 None:intergenic 45.0%
ATGAACATAGGGGTAGACAG+GGG + chr8_1:70080041-70080060 None:intergenic 45.0%
GATGAACATAGGGGTAGACA+GGG + chr8_1:70080042-70080061 None:intergenic 45.0%
AGATGAACATAGGGGTAGAC+AGG + chr8_1:70080043-70080062 None:intergenic 45.0%
CAGAGAAGTGAAGTGAAGGA+GGG + chr8_1:70080078-70080097 None:intergenic 45.0%
GTTCCAGAGAAGTGAAGTGA+AGG + chr8_1:70080082-70080101 None:intergenic 45.0%
GATCTATCCACAACCACAAG+GGG + chr8_1:70080135-70080154 None:intergenic 45.0%
GGATCTATCCACAACCACAA+GGG + chr8_1:70080136-70080155 None:intergenic 45.0%
TGGATCTATCCACAACCACA+AGG + chr8_1:70080137-70080156 None:intergenic 45.0%
TGAGCTTAGGTAGACGGAAA+GGG + chr8_1:70080495-70080514 None:intergenic 45.0%
AGTAAGTGAAGGATCAGGGA+GGG + chr8_1:70080554-70080573 None:intergenic 45.0%
AAGTAAGTGAAGGATCAGGG+AGG + chr8_1:70080555-70080574 None:intergenic 45.0%
ACTAGTGGTAAGAGAGTGAG+TGG - chr8_1:70078522-70078541 Msa1210860:three_prime_UTR 45.0%
! CAGAGGTTACAAAGGGTATG+TGG - chr8_1:70079074-70079093 Msa1210860:three_prime_UTR 45.0%
! TGGGAGGATTAGTAAGCTCA+GGG + chr8_1:70079925-70079944 None:intergenic 45.0%
! ATGGGAGGATTAGTAAGCTC+AGG + chr8_1:70079926-70079945 None:intergenic 45.0%
ATGAACATAGGGGTAGACAG+GGG + chr8_1:70080041-70080060 None:intergenic 45.0%
GATGAACATAGGGGTAGACA+GGG + chr8_1:70080042-70080061 None:intergenic 45.0%
AGATGAACATAGGGGTAGAC+AGG + chr8_1:70080043-70080062 None:intergenic 45.0%
CAGAGAAGTGAAGTGAAGGA+GGG + chr8_1:70080078-70080097 None:intergenic 45.0%
GTTCCAGAGAAGTGAAGTGA+AGG + chr8_1:70080082-70080101 None:intergenic 45.0%
GATCTATCCACAACCACAAG+GGG + chr8_1:70080135-70080154 None:intergenic 45.0%
GGATCTATCCACAACCACAA+GGG + chr8_1:70080136-70080155 None:intergenic 45.0%
TGGATCTATCCACAACCACA+AGG + chr8_1:70080137-70080156 None:intergenic 45.0%
TGAGCTTAGGTAGACGGAAA+GGG + chr8_1:70080495-70080514 None:intergenic 45.0%
AGTAAGTGAAGGATCAGGGA+GGG + chr8_1:70080554-70080573 None:intergenic 45.0%
AAGTAAGTGAAGGATCAGGG+AGG + chr8_1:70080555-70080574 None:intergenic 45.0%
CCAGAGAAGTGAAGTGAAGG+AGG + chr8_1:70080079-70080098 None:intergenic 50.0%
CCTCCTTCACTTCACTTCTC+TGG - chr8_1:70080076-70080095 Msa1210860:CDS 50.0%
GTTGTTGGGGACACAAACGA+CGG + chr8_1:70080446-70080465 None:intergenic 50.0%
TTTGTGTCCCCAACAACCTC+CGG - chr8_1:70080449-70080468 Msa1210860:CDS 50.0%
CTTAGGTAGACGGAAAGGGA+CGG + chr8_1:70080491-70080510 None:intergenic 50.0%
GTGAGCTTAGGTAGACGGAA+AGG + chr8_1:70080496-70080515 None:intergenic 50.0%
TCGGAGTGAGCTTAGGTAGA+CGG + chr8_1:70080501-70080520 None:intergenic 50.0%
GAAATCGTCGGAGTGAGCTT+AGG + chr8_1:70080508-70080527 None:intergenic 50.0%
GTCTTCTCATGTTTCCGGCA+CGG - chr8_1:70080583-70080602 Msa1210860:CDS 50.0%
CCAGAGAAGTGAAGTGAAGG+AGG + chr8_1:70080079-70080098 None:intergenic 50.0%
CCTCCTTCACTTCACTTCTC+TGG - chr8_1:70080076-70080095 Msa1210860:CDS 50.0%
GTTGTTGGGGACACAAACGA+CGG + chr8_1:70080446-70080465 None:intergenic 50.0%
TTTGTGTCCCCAACAACCTC+CGG - chr8_1:70080449-70080468 Msa1210860:CDS 50.0%
CTTAGGTAGACGGAAAGGGA+CGG + chr8_1:70080491-70080510 None:intergenic 50.0%
GTGAGCTTAGGTAGACGGAA+AGG + chr8_1:70080496-70080515 None:intergenic 50.0%
TCGGAGTGAGCTTAGGTAGA+CGG + chr8_1:70080501-70080520 None:intergenic 50.0%
GAAATCGTCGGAGTGAGCTT+AGG + chr8_1:70080508-70080527 None:intergenic 50.0%
GTCTTCTCATGTTTCCGGCA+CGG - chr8_1:70080583-70080602 Msa1210860:CDS 50.0%
TCAGGGAGGGAACTCAGAAC+CGG + chr8_1:70080541-70080560 None:intergenic 55.0%
TTCTCATGTTTCCGGCACGG+TGG - chr8_1:70080586-70080605 Msa1210860:CDS 55.0%
TCAGGGAGGGAACTCAGAAC+CGG + chr8_1:70080541-70080560 None:intergenic 55.0%
TTCTCATGTTTCCGGCACGG+TGG - chr8_1:70080586-70080605 Msa1210860:CDS 55.0%
TTCCACCGCCGGAGGTTGTT+GGG + chr8_1:70080460-70080479 None:intergenic 60.0%
TTTCCACCGCCGGAGGTTGT+TGG + chr8_1:70080461-70080480 None:intergenic 60.0%
GGTAGACGGAAAGGGACGGT+CGG + chr8_1:70080487-70080506 None:intergenic 60.0%
TCATGTTTCCGGCACGGTGG+CGG - chr8_1:70080589-70080608 Msa1210860:CDS 60.0%
TTCCACCGCCGGAGGTTGTT+GGG + chr8_1:70080460-70080479 None:intergenic 60.0%
TTTCCACCGCCGGAGGTTGT+TGG + chr8_1:70080461-70080480 None:intergenic 60.0%
GGTAGACGGAAAGGGACGGT+CGG + chr8_1:70080487-70080506 None:intergenic 60.0%
TCATGTTTCCGGCACGGTGG+CGG - chr8_1:70080589-70080608 Msa1210860:CDS 60.0%
GTGTCCCCAACAACCTCCGG+CGG - chr8_1:70080452-70080471 Msa1210860:CDS 65.0%
TCCACCGCCGGAGGTTGTTG+GGG + chr8_1:70080459-70080478 None:intergenic 65.0%
AGACGGAAAGGGACGGTCGG+CGG + chr8_1:70080484-70080503 None:intergenic 65.0%
GTGTCCCCAACAACCTCCGG+CGG - chr8_1:70080452-70080471 Msa1210860:CDS 65.0%
TCCACCGCCGGAGGTTGTTG+GGG + chr8_1:70080459-70080478 None:intergenic 65.0%
AGACGGAAAGGGACGGTCGG+CGG + chr8_1:70080484-70080503 None:intergenic 65.0%
TCCCCAACAACCTCCGGCGG+TGG - chr8_1:70080455-70080474 Msa1210860:CDS 70.0%
! TGTTTCCGGCACGGTGGCGG+CGG - chr8_1:70080592-70080611 Msa1210860:CDS 70.0%
TCCCCAACAACCTCCGGCGG+TGG - chr8_1:70080455-70080474 Msa1210860:CDS 70.0%
! TGTTTCCGGCACGGTGGCGG+CGG - chr8_1:70080592-70080611 Msa1210860:CDS 70.0%
TCGGCGGTTTCCACCGCCGG+AGG + chr8_1:70080468-70080487 None:intergenic 75.0%
CGGTCGGCGGTTTCCACCGC+CGG + chr8_1:70080471-70080490 None:intergenic 75.0%
! GGTGGCGGCGGTGGTGGTGA+TGG - chr8_1:70080604-70080623 Msa1210860:CDS 75.0%
TCGGCGGTTTCCACCGCCGG+AGG + chr8_1:70080468-70080487 None:intergenic 75.0%
CGGTCGGCGGTTTCCACCGC+CGG + chr8_1:70080471-70080490 None:intergenic 75.0%
! GGTGGCGGCGGTGGTGGTGA+TGG - chr8_1:70080604-70080623 Msa1210860:CDS 75.0%
!! TTCCGGCACGGTGGCGGCGG+TGG - chr8_1:70080595-70080614 Msa1210860:CDS 80.0%
! CACCACCGCCGCCACCGTGC+CGG + chr8_1:70080600-70080619 None:intergenic 80.0%
!! TTCCGGCACGGTGGCGGCGG+TGG - chr8_1:70080595-70080614 Msa1210860:CDS 80.0%
! CACCACCGCCGCCACCGTGC+CGG + chr8_1:70080600-70080619 None:intergenic 80.0%
!! CGGCACGGTGGCGGCGGTGG+TGG - chr8_1:70080598-70080617 Msa1210860:CDS 85.0%
!! CGGCACGGTGGCGGCGGTGG+TGG - chr8_1:70080598-70080617 Msa1210860:CDS 85.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 70078493 70080778 70078493 ID=Msa1210860;Name=Msa1210860
chr8_1 mRNA 70078493 70080778 70078493 ID=Msa1210860-mRNA-1;Parent=Msa1210860;Name=Msa1210860-mRNA-1;_AED=0.13;_eAED=0.13;_QI=154|1|1|1|1|1|3|983|188
chr8_1 exon 70078493 70079595 70078493 ID=Msa1210860-mRNA-1:exon:23429;Parent=Msa1210860-mRNA-1
chr8_1 exon 70080055 70080194 70080055 ID=Msa1210860-mRNA-1:exon:23428;Parent=Msa1210860-mRNA-1
chr8_1 exon 70080318 70080778 70080318 ID=Msa1210860-mRNA-1:exon:23427;Parent=Msa1210860-mRNA-1
chr8_1 five_prime_UTR 70080625 70080778 70080625 ID=Msa1210860-mRNA-1:five_prime_utr;Parent=Msa1210860-mRNA-1
chr8_1 CDS 70080318 70080624 70080318 ID=Msa1210860-mRNA-1:cds;Parent=Msa1210860-mRNA-1
chr8_1 CDS 70080055 70080194 70080055 ID=Msa1210860-mRNA-1:cds;Parent=Msa1210860-mRNA-1
chr8_1 CDS 70079476 70079595 70079476 ID=Msa1210860-mRNA-1:cds;Parent=Msa1210860-mRNA-1
chr8_1 three_prime_UTR 70078493 70079475 70078493 ID=Msa1210860-mRNA-1:three_prime_utr;Parent=Msa1210860-mRNA-1
Gene Sequence

>Msa1210860

ATGGGAAATTGTCAAGCTATTGATACAGCAACTCTTGTGATACAGCAACCAAATGGCAAAGAAGAAAGGTTGTATTGGCCAGTTACTGCTAGTGAAGTGATGAAGACACACCCTGATCACTATGTTGCTCTTCTTATCTCCACAACATTATGCACTTCAAAAGACAAAGAAAATTGTTCAAATAAGAGCAGCGACAACAACAACGACGACAACAACAACAACAAAGTTCGTATTACACGTATAAAACTTCTTAAGCCAACAGATACACTTTTGCTTGGTCAAGTTTATAGACTCATCTCAGCTCAAGAGGTTACAAAGGGTATGTGGGCTAAGAAACAAGCAAAGATGAAGAGAAACTCTTTGCCAGAATCAGCACAAAAGTCAAATCAGATTAAGGAAAGGATTAATGATAAAACAGCTAATAGGTCTGAACCTGAAGATAACAAGGAAACAAAATCTGAAAGACATGAGTCAAGGACAAAAGCAACAACAAATGGTGGCAATCATAATAATAAGTCAAGAACATGGCAACCCTCTTTACAAAGCATCACTGAATCTGCCAGCTGA
Protein sequence

>Msa1210860

MGNCQAIDTATLVIQQPNGKEERLYWPVTASEVMKTHPDHYVALLISTTLCTSKDKENCSNKSSDNNNDDNNNNKVRITRIKLLKPTDTLLLGQVYRLISAQEVTKGMWAKKQAKMKRNSLPESAQKSNQIKERINDKTANRSEPEDNKETKSERHESRTKATTNGGNHNNKSRTWQPSLQSITESAS*