AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1399250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1399250 MtrunA17_Chr5g0448681 93.918 1003 37 7 3 984 2 1001 0.0 1833
Msa1399250 MtrunA17_Chr1g0152721 82.646 582 73 3 300 881 1 554 0.0 959
Msa1399250 MtrunA17_Chr3g0144041 41.844 846 427 19 115 947 271 1064 8.86e-175 541
Msa1399250 MtrunA17_Chr3g0144041 72.072 111 30 1 10 120 5 114 1.36e-41 166
Msa1399250 MtrunA17_Chr1g0152711 90.435 115 11 0 1 115 1 115 1.95e-64 214
Msa1399250 MtrunA17_Chr4g0075521 39.326 89 54 0 6 94 10 98 5.30e-13 72.8
Msa1399250 MtrunA17_Chr2g0289411 42.500 80 46 0 15 94 14 93 1.90e-12 71.2
Msa1399250 MtrunA17_Chr5g0444771 37.647 85 53 0 6 90 10 94 1.54e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1399250 AT1G21630.3 44.342 1087 439 34 13 980 11 1050 0.0 695
Msa1399250 AT1G21630.1 45.709 1002 395 28 13 903 11 974 0.0 692
Msa1399250 AT1G20760.1 42.318 1087 442 32 10 984 6 1019 0.0 679
Msa1399250 AT1G21630.4 43.151 1117 438 36 13 980 11 1079 0.0 677
Msa1399250 AT1G21630.2 44.380 1032 394 30 13 903 11 1003 0.0 675
Msa1399250 AT4G05520.2 40.741 81 48 0 14 94 19 99 2.52e-13 74.3
Msa1399250 AT4G05520.1 40.741 81 48 0 14 94 19 99 2.64e-13 74.3
Msa1399250 AT3G20290.3 38.202 89 55 0 2 90 6 94 4.95e-13 73.6
Msa1399250 AT3G20290.1 38.202 89 55 0 2 90 6 94 4.95e-13 73.6
Msa1399250 AT3G20290.2 38.202 89 55 0 2 90 6 94 4.95e-13 73.6

Find 287 sgRNAs with CRISPR-Local

Find 794 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTCCAAGACTGGAATTT+TGG 0.083383 tig0022346:+53164 None:intergenic
TTAGGCGACGCTACAAATTT+TGG 0.153429 tig0022346:+48809 None:intergenic
TCTGCCATTGTTCCTGTATC+TGG 0.185414 tig0022346:-54101 Msa1399250:CDS
TCCCACTTGATTTCTTAAAT+TGG 0.196396 tig0022346:-44828 Msa1399250:three_prime_UTR
AACTGAATCCACTGGTCTTC+TGG 0.214249 tig0022346:+45351 None:intergenic
CCCAATCAGCAGCTCCTTCT+TGG 0.235708 tig0022346:+50294 None:intergenic
GACAACTATTTCTTTAGTTC+TGG 0.248675 tig0022346:-45428 Msa1399250:CDS
CCAGATGAAGTGGGCATATT+AGG 0.254876 tig0022346:+53945 None:intergenic
CTAGAAAAGGATCTGATAAT+TGG 0.254950 tig0022346:-45058 Msa1399250:CDS
ATGATGATATTGATTCAGTT+TGG 0.264630 tig0022346:-46723 Msa1399250:CDS
GACTCGGATCCCTTTGGCTC+TGG 0.272802 tig0022346:-45113 Msa1399250:CDS
TGCTCTCTCTCAGAGAGTTT+TGG 0.274800 tig0022346:-53549 Msa1399250:CDS
GTGTCAAAGGTTCCCCAATT+AGG 0.276461 tig0022346:+46748 None:intergenic
TCTGATTTATCATCACTCTT+AGG 0.279359 tig0022346:+48791 None:intergenic
AAAGAAAGAAATAAAGAAAT+TGG 0.279909 tig0022346:-55198 Msa1399250:five_prime_UTR
GCAGCTTCCTCTGCCTTCCC+TGG 0.282754 tig0022346:-54359 Msa1399250:CDS
AATGCAGCTTTAACCATTTC+AGG 0.285045 tig0022346:+54578 None:intergenic
ATATCAGGAAGAATGTTATT+TGG 0.285131 tig0022346:+53469 None:intergenic
ATCCTTGTGGAGAATTGTTT+TGG 0.291045 tig0022346:+54129 None:intergenic
CTTGCGCATCATCTTGATTA+CGG 0.292981 tig0022346:+48591 None:intergenic
CTTTCTGATGAAGTCCTAAA+AGG 0.307251 tig0022346:+45089 None:intergenic
CATGTGTTATTTCTGTCTTC+AGG 0.308763 tig0022346:-45001 Msa1399250:three_prime_UTR
TGATGATATTGATTCAGTTT+GGG 0.312070 tig0022346:-46722 Msa1399250:CDS
CCTAATATGCCCACTTCATC+TGG 0.322984 tig0022346:-53945 Msa1399250:CDS
TTGCGCATCATCTTGATTAC+GGG 0.327200 tig0022346:+48592 None:intergenic
AAGATTTGGTGCAGTGGATT+GGG 0.327830 tig0022346:+54493 None:intergenic
CAGACAGATACCAATTGAAT+TGG 0.330966 tig0022346:+55066 None:intergenic
CAAGATTTGGTGCAGTGGAT+TGG 0.341717 tig0022346:+54492 None:intergenic
ACCAGTCCTTAGGCCTTTGC+GGG 0.342679 tig0022346:+45282 None:intergenic
GAAATATACAAGAGTATTCA+TGG 0.344953 tig0022346:-53844 Msa1399250:CDS
TGGACTTCCAGTTAGATTGC+AGG 0.345688 tig0022346:-53925 Msa1399250:CDS
CCAGTAGTCGTGGGTATATC+AGG 0.346839 tig0022346:+53454 None:intergenic
GAACCAGCATGCCTCGGTTC+AGG 0.352210 tig0022346:-53970 Msa1399250:CDS
CTGCTTGCAAATGGACTATT+AGG 0.353285 tig0022346:+48686 None:intergenic
CCTCCCTGTGTCGCTCCATT+AGG 0.353651 tig0022346:+53515 None:intergenic
GGTCCCCTTGGTCCAAGATT+TGG 0.355694 tig0022346:+54479 None:intergenic
AGTGAGGTCTGCAAAGAATC+AGG 0.355697 tig0022346:+54047 None:intergenic
ACATCAGTCTGAGTCATTCT+TGG 0.356881 tig0022346:+53870 None:intergenic
CAATCCACTGCACCAAATCT+TGG 0.357449 tig0022346:-54491 Msa1399250:CDS
AATGAACGGTGCAAGAAGTA+TGG 0.359913 tig0022346:-51266 Msa1399250:CDS
ACCTCAGACTACAAATGAAC+AGG 0.361971 tig0022346:-48765 Msa1399250:CDS
GGCTGTGAACGCAAAAGCTT+TGG 0.363833 tig0022346:-48843 Msa1399250:CDS
CAATTCTGACTTTGATGAAC+TGG 0.368165 tig0022346:-51300 Msa1399250:CDS
TTATTTCCGTCGTGCCGATT+TGG 0.368421 tig0022346:-54956 Msa1399250:CDS
GACTGATTTCCCCAAGTTAC+GGG 0.369318 tig0022346:+53409 None:intergenic
CGAGGAACTTGTTTCTTAGT+TGG 0.370132 tig0022346:-53779 Msa1399250:CDS
TCCTCTCAGCTACCAGTTAG+AGG 0.375266 tig0022346:-54311 Msa1399250:CDS
CTACCCACTCAAGGACTTCC+TGG 0.376304 tig0022346:-54392 Msa1399250:CDS
TCTTTCTACTTGTGCTTCAA+TGG 0.380891 tig0022346:-55025 Msa1399250:exon
ACAGAATCCTGCAATCTAAC+TGG 0.385097 tig0022346:+53918 None:intergenic
TTGGATTGCACTGTACCTAA+TGG 0.391952 tig0022346:-53530 Msa1399250:CDS
TCCTCTGCCTTCCCTGGGTA+TGG 0.392175 tig0022346:-54353 Msa1399250:CDS
GAAGCTGCAGGGCGAGGTCC+AGG 0.393251 tig0022346:+54374 None:intergenic
AGTAAGCCATCTGATACTTC+TGG 0.396585 tig0022346:-54221 Msa1399250:CDS
AGAACTTGAGAAAGAAATAG+TGG 0.397031 tig0022346:-52680 Msa1399250:CDS
ATCTCCACAGTCCCGTAACT+TGG 0.397428 tig0022346:-53420 Msa1399250:CDS
AACCAGTCCTTAGGCCTTTG+CGG 0.408355 tig0022346:+45281 None:intergenic
TTTCTTTAGTTCTGGAGACC+TGG 0.408705 tig0022346:-45420 Msa1399250:CDS
TGGGAAAATCACCGGGGAAC+AGG 0.411070 tig0022346:-53802 Msa1399250:CDS
TTTGATGACTCGGATCCCTT+TGG 0.411828 tig0022346:-45119 Msa1399250:CDS
GGAGGGACAGCAGCCGGCCT+TGG 0.413740 tig0022346:+53222 None:intergenic
ACTCGGATCCCTTTGGCTCT+GGG 0.413782 tig0022346:-45112 Msa1399250:CDS
CCAAGAAGGAGCTGCTGATT+GGG 0.414207 tig0022346:-50294 Msa1399250:CDS
GAGGGAGCCAGAGTTCTATT+AGG 0.415142 tig0022346:-54079 Msa1399250:CDS
GGCTTCCTCCGTTGTCAACT+TGG 0.415490 tig0022346:+51615 None:intergenic
TCTGACATTCGAAAGACTTC+CGG 0.415671 tig0022346:-48629 Msa1399250:CDS
TGGGATAAGCTTGAAGATAA+AGG 0.418203 tig0022346:-50263 Msa1399250:intron
GGCGATCAATCCAATTCAAT+TGG 0.418912 tig0022346:-55076 Msa1399250:five_prime_UTR
AGCAACCCTTGTTGAGATGA+AGG 0.419250 tig0022346:+44591 None:intergenic
CCCTGTTCATTTGTAGTCTG+AGG 0.423333 tig0022346:+48764 None:intergenic
TGCTGATTGGGATGAGGATT+GGG 0.423748 tig0022346:-50282 Msa1399250:CDS
TTACAGGAGAGAGAGCTTGA+TGG 0.424029 tig0022346:-45458 Msa1399250:intron
CTTGGTGGCCGACCTGCTGT+AGG 0.424041 tig0022346:+53240 None:intergenic
GTTTATAACAAAAGTGATGA+TGG 0.425078 tig0022346:-48725 Msa1399250:CDS
CTGCTGATTGGGATGAGGAT+TGG 0.428599 tig0022346:-50283 Msa1399250:CDS
GTCTCTTTCTTCCAAGGCTC+CGG 0.431818 tig0022346:-54901 Msa1399250:CDS
GGGACAGCAGCCGGCCTTGG+TGG 0.433007 tig0022346:+53225 None:intergenic
TCCAAGAAGGAGCTGCTGAT+TGG 0.435562 tig0022346:-50295 Msa1399250:CDS
GAAATCCAAAATTCCAGTCT+TGG 0.436376 tig0022346:-53169 Msa1399250:CDS
GGTGATTGATTATTATTGAT+TGG 0.438629 tig0022346:-55097 Msa1399250:five_prime_UTR
AGCAGGTCGGCCACCAAGGC+CGG 0.439433 tig0022346:-53235 Msa1399250:CDS
AAGAATACATTACAAATAAG+AGG 0.441111 tig0022346:+44926 None:intergenic
TGACTGATTTCCCCAAGTTA+CGG 0.443430 tig0022346:+53408 None:intergenic
GCGCGAACTCACTCCTGAAA+TGG 0.448079 tig0022346:-54591 Msa1399250:CDS
TTCTTTAGTTCTGGAGACCT+GGG 0.448365 tig0022346:-45419 Msa1399250:CDS
CTCTGGCTCCCTCCAGATAC+AGG 0.448704 tig0022346:+54089 None:intergenic
TGCAAAGCCCACGACATTAG+TGG 0.449716 tig0022346:-51237 Msa1399250:CDS
GAAGATAAATATAAGCAAGT+TGG 0.450494 tig0022346:-51649 Msa1399250:CDS
TCATTCTTGGCCATGGAGAT+TGG 0.452820 tig0022346:+53883 None:intergenic
GATCTGAGGAGCAGGAATCT+TGG 0.455601 tig0022346:+54538 None:intergenic
ACGGGACTAGTTCCTCTAAC+TGG 0.457103 tig0022346:+54299 None:intergenic
AGAAATAACACATGAATTTG+TGG 0.457229 tig0022346:+45010 None:intergenic
AAAGGAAGGGAAAATAGAAC+AGG 0.459609 tig0022346:-55139 Msa1399250:five_prime_UTR
AGATTGCAGGATTCTGTGTC+AGG 0.460277 tig0022346:-53912 Msa1399250:CDS
GAAAGTCAAACTCCTAGAAA+AGG 0.462697 tig0022346:-45071 Msa1399250:CDS
CAGCTTCCTCTGCCTTCCCT+GGG 0.463100 tig0022346:-54358 Msa1399250:CDS
ACTCCACCAGAGGCAAATAT+CGG 0.464967 tig0022346:+44974 None:intergenic
ATGTTATTTGGAAGTATACT+TGG 0.465197 tig0022346:+53481 None:intergenic
GCAGATGTTGTAATTGCAAC+GGG 0.468123 tig0022346:+54281 None:intergenic
TATCCCCACCTGATGAGATC+GGG 0.468158 tig0022346:-44739 Msa1399250:three_prime_UTR
GCAGAGGAAGCTGCAGGGCG+AGG 0.469441 tig0022346:+54368 None:intergenic
GGGAAGGCAGAGGAAGCTGC+AGG 0.470047 tig0022346:+54362 None:intergenic
GAGCTGAAAAGTGGGGTGCT+TGG 0.470554 tig0022346:+45314 None:intergenic
ATACCAAGGGATTGTCAAGT+TGG 0.472782 tig0022346:-51455 Msa1399250:CDS
GGTGGTTGTGCTTCCCGAGC+AGG 0.473964 tig0022346:+45197 None:intergenic
AGGGATTGTCAAGTTGGAAC+AGG 0.474706 tig0022346:-51449 Msa1399250:CDS
AAGAAATCAAGTGGGATCGC+TGG 0.474833 tig0022346:+44835 None:intergenic
TCTCCACAGTCCCGTAACTT+GGG 0.476223 tig0022346:-53419 Msa1399250:CDS
ATGAGATGCTTCTCCAAGAC+TGG 0.476986 tig0022346:+53156 None:intergenic
AATATCATCATTTGTGTCAA+AGG 0.479869 tig0022346:+46735 None:intergenic
AGCAACAGAAGCTGATAAGA+AGG 0.481859 tig0022346:-53082 Msa1399250:intron
CCTGATATACCCACGACTAC+TGG 0.485235 tig0022346:-53454 Msa1399250:CDS
CATCAAGGGATGACTGGATC+TGG 0.485293 tig0022346:-53279 Msa1399250:CDS
TCAGATGGAGGGACAGCAGC+CGG 0.485842 tig0022346:+53216 None:intergenic
GCAAAATTGATCTGAGGAGC+AGG 0.486606 tig0022346:+54530 None:intergenic
TAGTGTATCTTTACCTGCTC+GGG 0.487693 tig0022346:-45210 Msa1399250:CDS
GCATCGAACAGATCCACATT+AGG 0.489829 tig0022346:+54979 None:intergenic
GAGAGAGAGCTTGATGGAGC+TGG 0.490771 tig0022346:-45452 Msa1399250:CDS
CGGCTTCGACACCGCTGATA+CGG 0.491132 tig0022346:+54923 None:intergenic
ACATTAGTGGAGCTACCCTT+TGG 0.492253 tig0022346:-51224 Msa1399250:intron
GTCTGAGTCATTCTTGGCCA+TGG 0.492406 tig0022346:+53876 None:intergenic
AAGTCCTTGAGTGGGTAGAC+TGG 0.493318 tig0022346:+54397 None:intergenic
CAATCGTCTTAACGAGATCA+TGG 0.493342 tig0022346:-51803 Msa1399250:CDS
ACAAATCAGAGTGGTTTCCT+AGG 0.493644 tig0022346:-54665 Msa1399250:CDS
CTCAGCCAACTCCATTAGTA+AGG 0.494821 tig0022346:-54439 Msa1399250:CDS
TGATTTGGAAGAGGTCCCCT+TGG 0.497681 tig0022346:+54467 None:intergenic
GCAGGAATCTTGGATGCAGC+TGG 0.500240 tig0022346:+54548 None:intergenic
CCGATAGTACTGCTTGCAAA+TGG 0.504423 tig0022346:+48677 None:intergenic
AAGTAGACAGAGATAGAGAT+GGG 0.506112 tig0022346:-53821 Msa1399250:CDS
ATTTCTTAAATTGGAAGTGA+AGG 0.510345 tig0022346:-44819 Msa1399250:three_prime_UTR
GTAACTTGGGGAAATCAGTC+AGG 0.510887 tig0022346:-53406 Msa1399250:intron
AAAGGTGTTCAACAACATCA+AGG 0.512816 tig0022346:-53294 Msa1399250:intron
ACGGCCGTCACGATCCAAAT+CGG 0.514554 tig0022346:+54942 None:intergenic
CAATTCCCCGCAAAGGCCTA+AGG 0.515130 tig0022346:-45288 Msa1399250:CDS
AGCCACATTCCGTGACATAC+AGG 0.515862 tig0022346:-51596 Msa1399250:intron
CAACAACATCAAGGGATGAC+TGG 0.516067 tig0022346:-53285 Msa1399250:CDS
GCCATTGTTCCTGTATCTGG+AGG 0.518118 tig0022346:-54098 Msa1399250:CDS
TGCTGGTTCTGATTCACTGC+CGG 0.518194 tig0022346:+53984 None:intergenic
TGGTGGTCCTAATAGAACTC+TGG 0.519340 tig0022346:+54072 None:intergenic
GAATTGCTTGAGCTGAAAAG+TGG 0.520785 tig0022346:+45305 None:intergenic
GCAGCTCCTTCTTGGATACC+AGG 0.522331 tig0022346:+50302 None:intergenic
GATAGAGATGGGAAAATCAC+CGG 0.522378 tig0022346:-53810 Msa1399250:CDS
TGGTCCAAGATTTGGTGCAG+TGG 0.524715 tig0022346:+54487 None:intergenic
TATCATTATCTTGATCAGAT+AGG 0.525293 tig0022346:+53575 None:intergenic
CAAGTTCCTCGCCTGTTCCC+CGG 0.525330 tig0022346:+53791 None:intergenic
TTCCAATTTAAGAAATCAAG+TGG 0.526131 tig0022346:+44826 None:intergenic
GGCTGGTTCTGCTGAAGATG+TGG 0.527341 tig0022346:+54005 None:intergenic
GATGATATTGATTCAGTTTG+GGG 0.529758 tig0022346:-46721 Msa1399250:CDS
TTCGCGCTTGCTCTGTGCGA+CGG 0.531747 tig0022346:+54607 None:intergenic
CCATCTGATACTTCTGGCAA+TGG 0.531884 tig0022346:-54215 Msa1399250:CDS
ATAGTGTATCTTTACCTGCT+CGG 0.533725 tig0022346:-45211 Msa1399250:CDS
ACGGGACTGTGGAGATTGAC+AGG 0.534564 tig0022346:+53427 None:intergenic
GAAGCCGTCTCTTTCTTCCA+AGG 0.535408 tig0022346:-54907 Msa1399250:CDS
GCGCCTGAACCGAGGCATGC+TGG 0.535855 tig0022346:+53967 None:intergenic
AACTGGAAGTCCAGATGAAG+TGG 0.536635 tig0022346:+53935 None:intergenic
CCTAAAAGGCCCAGAGCCAA+AGG 0.538643 tig0022346:+45103 None:intergenic
CGGACAGAATCAAATCGTAC+TGG 0.538647 tig0022346:+45176 None:intergenic
GTTCCAACTTGACAATCCCT+TGG 0.538804 tig0022346:+51452 None:intergenic
TGTACCTAATGGAGCGACAC+AGG 0.539980 tig0022346:-53519 Msa1399250:CDS
CGAGGCATGTTGCCATACCC+AGG 0.540224 tig0022346:+54341 None:intergenic
GCTGTCCCTCCATCTGATGA+AGG 0.542889 tig0022346:-53210 Msa1399250:CDS
ATGGTTAAAGCTGCATTGTA+TGG 0.543633 tig0022346:-54572 Msa1399250:CDS
CACCTGTATGTCACGGAATG+TGG 0.543777 tig0022346:+51594 None:intergenic
AGAAATCAAGTGGGATCGCT+GGG 0.543918 tig0022346:+44836 None:intergenic
TACTATCGGAAGTCCGCATA+GGG 0.544690 tig0022346:-48663 Msa1399250:CDS
GAAGTAGACAGAGATAGAGA+TGG 0.545228 tig0022346:-53822 Msa1399250:CDS
GTATCCCCACCTGATGAGAT+CGG 0.546600 tig0022346:-44740 Msa1399250:three_prime_UTR
TTGGTTAGGCTGAGATGAGG+TGG 0.547246 tig0022346:+54148 None:intergenic
CGTTAAGACGATTGTCGCAT+CGG 0.548638 tig0022346:+51812 None:intergenic
AGCAGATGAAGTAGGTGCGA+GGG 0.552013 tig0022346:+54244 None:intergenic
CTGCAAAGAATCAGGGGTGG+TGG 0.555519 tig0022346:+54055 None:intergenic
ATCATCAAAACTGAATCCAC+TGG 0.556026 tig0022346:+45343 None:intergenic
TTGGTGGCCGACCTGCTGTA+GGG 0.556959 tig0022346:+53241 None:intergenic
AGATTTGGTGCAGTGGATTG+GGG 0.561264 tig0022346:+54494 None:intergenic
GTGAGGTCTGCAAAGAATCA+GGG 0.561557 tig0022346:+54048 None:intergenic
CCCCGCAAAGGCCTAAGGAC+TGG 0.561681 tig0022346:-45283 Msa1399250:CDS
AATTGCTTGAGCTGAAAAGT+GGG 0.564157 tig0022346:+45306 None:intergenic
GAGTTCCTTCATCAGATGGA+GGG 0.565966 tig0022346:+53205 None:intergenic
AGCAGATGTTGTAATTGCAA+CGG 0.567076 tig0022346:+54280 None:intergenic
AGAGGCCTTACTAATGGAGT+TGG 0.567196 tig0022346:+54434 None:intergenic
TTTCTTGCACCTGTATGTCA+CGG 0.569492 tig0022346:+51587 None:intergenic
GCAAAGGCCTAAGGACTGGT+TGG 0.571718 tig0022346:-45279 Msa1399250:CDS
AAATCACCGGGGAACAGGCG+AGG 0.571813 tig0022346:-53797 Msa1399250:CDS
GGGTAGCTCCACTAATGTCG+TGG 0.572123 tig0022346:+51229 None:intergenic
TTTATAACAAAAGTGATGAT+GGG 0.572887 tig0022346:-48724 Msa1399250:CDS
CTGCACCAAATCTTGGACCA+AGG 0.572913 tig0022346:-54484 Msa1399250:CDS
CCATTTGCAAGCAGTACTAT+CGG 0.574980 tig0022346:-48677 Msa1399250:CDS
CTAAAAGGCCCAGAGCCAAA+GGG 0.576310 tig0022346:+45104 None:intergenic
AAATACTGATGACACTGTAC+AGG 0.576435 tig0022346:-51422 Msa1399250:intron
TGTAGAACTCTGCACGACCT+AGG 0.577556 tig0022346:+54648 None:intergenic
AGGAGCTGCTGATTGGGATG+AGG 0.578287 tig0022346:-50288 Msa1399250:CDS
TGAGTTCCTTCATCAGATGG+AGG 0.578889 tig0022346:+53204 None:intergenic
TGCACCAAATCTTGGACCAA+GGG 0.579499 tig0022346:-54483 Msa1399250:CDS
TCTTGCATATGCAGTGATCA+TGG 0.583093 tig0022346:-46814 Msa1399250:intron
GTACTATCGGAAGTCCGCAT+AGG 0.583487 tig0022346:-48664 Msa1399250:CDS
AATCCTTTAGGCTGGCAACC+TGG 0.583706 tig0022346:-50320 Msa1399250:intron
ACGGGGTGAGCTATCTTCAC+CGG 0.584518 tig0022346:+48610 None:intergenic
GACAGGTTGACCAGTAGTCG+TGG 0.586566 tig0022346:+53444 None:intergenic
CCATTGTTCCTGTATCTGGA+GGG 0.588409 tig0022346:-54097 Msa1399250:CDS
TACCTCCTTAGTGATGCTAC+TGG 0.590533 tig0022346:+46690 None:intergenic
ATAGAGATGGGAAAATCACC+GGG 0.590747 tig0022346:-53809 Msa1399250:CDS
CGACAACTCAACCCTACAGC+AGG 0.591099 tig0022346:-53252 Msa1399250:CDS
CAATGCCAGTAGCATCACTA+AGG 0.592229 tig0022346:-46695 Msa1399250:CDS
GTCGTCGTCAGCGCCTAATG+TGG 0.592825 tig0022346:-54992 Msa1399250:CDS
GATCAAAATCCGCACTGCTG+CGG 0.595149 tig0022346:+45156 None:intergenic
GGTGAGCTCTGACCTGAGCA+AGG 0.596646 tig0022346:+54863 None:intergenic
CCTCAGACTACAAATGAACA+GGG 0.596661 tig0022346:-48764 Msa1399250:CDS
GAATCAGAACCAGCATGCCT+CGG 0.597210 tig0022346:-53976 Msa1399250:CDS
ACATCTTCAGCAGAACCAGC+CGG 0.598425 tig0022346:-54003 Msa1399250:CDS
CATTAAAACATCTTCACCAC+AGG 0.599364 tig0022346:-45387 Msa1399250:CDS
TTCCCCAAGTTACGGGACTG+TGG 0.600739 tig0022346:+53416 None:intergenic
AAAAGATTGAATTATACCAA+GGG 0.601242 tig0022346:-51468 Msa1399250:CDS
CCCTCCAGATACAGGAACAA+TGG 0.601366 tig0022346:+54097 None:intergenic
GTTCCGATATTTGCCTCTGG+TGG 0.602013 tig0022346:-44977 Msa1399250:three_prime_UTR
GCCATACCCAGGGAAGGCAG+AGG 0.602262 tig0022346:+54352 None:intergenic
AGTGGATTGGGGTGTGACAG+TGG 0.605237 tig0022346:+54505 None:intergenic
GGCTTACTAGCAGATGAAGT+AGG 0.608782 tig0022346:+54236 None:intergenic
GGATCCGAGTCATCAAAAGC+AGG 0.609531 tig0022346:+45125 None:intergenic
CTACAGCAGGTCGGCCACCA+AGG 0.611350 tig0022346:-53239 Msa1399250:CDS
TGGCAACCTGGTATCCAAGA+AGG 0.611414 tig0022346:-50308 Msa1399250:CDS
CAGGTCAGCACCAATCTCCA+TGG 0.614703 tig0022346:-53893 Msa1399250:CDS
GGAAGGCAGAGGAAGCTGCA+GGG 0.615609 tig0022346:+54363 None:intergenic
TGCGCATCATCTTGATTACG+GGG 0.616560 tig0022346:+48593 None:intergenic
AAGGGAAAATAGAACAGGAG+TGG 0.618860 tig0022346:-55134 Msa1399250:five_prime_UTR
TGGTCAAATCTCTAAATGAA+CGG 0.619830 tig0022346:-51280 Msa1399250:CDS
TCTGCCAGTCTACCCACTCA+AGG 0.620326 tig0022346:-54401 Msa1399250:CDS
CTCCACAGTCCCGTAACTTG+GGG 0.620807 tig0022346:-53418 Msa1399250:CDS
AACAGAGTGAGTAGCAAGTG+AGG 0.625475 tig0022346:+54031 None:intergenic
AAGGTGTTCAACAACATCAA+GGG 0.626189 tig0022346:-53293 Msa1399250:CDS
ACTACAAATGAACAGGGAGT+AGG 0.626388 tig0022346:-48758 Msa1399250:CDS
CCATTGCCAGAAGTATCAGA+TGG 0.628156 tig0022346:+54215 None:intergenic
GCTCAAGCAATTCCCCGCAA+AGG 0.628792 tig0022346:-45295 Msa1399250:CDS
CATATTAGGCGCCTGAACCG+AGG 0.630352 tig0022346:+53959 None:intergenic
GGTAGCTCCACTAATGTCGT+GGG 0.630673 tig0022346:+51230 None:intergenic
GATCTCTTCCAGAAGACCAG+TGG 0.630983 tig0022346:-45359 Msa1399250:CDS
ATCCCCACCTGATGAGATCG+GGG 0.631422 tig0022346:-44738 Msa1399250:three_prime_UTR
GTACCTAATGGAGCGACACA+GGG 0.632242 tig0022346:-53518 Msa1399250:CDS
TGATAACCTTCATCTCAACA+AGG 0.633396 tig0022346:-44597 Msa1399250:three_prime_UTR
TCCAAAACAAAAGCAACCAA+AGG 0.634034 tig0022346:-48864 Msa1399250:CDS
AGGTCCAGGAAGTCCTTGAG+TGG 0.634645 tig0022346:+54388 None:intergenic
TGGAAGAGATCAGCAGCCTG+TGG 0.635908 tig0022346:+45371 None:intergenic
TGCCAGTAGCATCACTAAGG+AGG 0.638921 tig0022346:-46692 Msa1399250:intron
GATCGTGACGGCCGTATCAG+CGG 0.640276 tig0022346:-54934 Msa1399250:CDS
TCCAATTTAAGAAATCAAGT+GGG 0.641246 tig0022346:+44827 None:intergenic
CATGTTGCCATACCCAGGGA+AGG 0.641769 tig0022346:+54346 None:intergenic
ATGGCAGATGAAAATCCTTG+TGG 0.642661 tig0022346:+54116 None:intergenic
CTTAGTTGGCAATTACCAAG+AGG 0.644602 tig0022346:-53765 Msa1399250:intron
GAGGCATGTTGCCATACCCA+GGG 0.650186 tig0022346:+54342 None:intergenic
CTAATGGAGCGACACAGGGA+GGG 0.650249 tig0022346:-53514 Msa1399250:CDS
TGCACAACTCACTCCACCAG+AGG 0.650407 tig0022346:+44964 None:intergenic
GATATCTGCTGATAAACATG+AGG 0.651388 tig0022346:-51776 Msa1399250:intron
TAGCAGATGAAGTAGGTGCG+AGG 0.652888 tig0022346:+54243 None:intergenic
CGTGCCGATTTGGATCGTGA+CGG 0.655206 tig0022346:-54946 Msa1399250:CDS
AACCAAAACAATTCTCCACA+AGG 0.655827 tig0022346:-54131 Msa1399250:CDS
CAGAGGGATATGGAATACAC+AGG 0.657283 tig0022346:+44893 None:intergenic
CAGAATTGATGCGATCAGCA+CGG 0.657300 tig0022346:+51315 None:intergenic
GTGGCAGCAAAATTGATCTG+AGG 0.657933 tig0022346:+54524 None:intergenic
AATGAACAGGGAGTAGGCAA+CGG 0.658714 tig0022346:-48752 Msa1399250:CDS
TCCTCTAACTGGTAGCTGAG+AGG 0.659362 tig0022346:+54310 None:intergenic
ACAGGTTGACCAGTAGTCGT+GGG 0.659671 tig0022346:+53445 None:intergenic
GCACCAAATCTTGGACCAAG+GGG 0.659970 tig0022346:-54482 Msa1399250:CDS
GGTCCAGGAAGTCCTTGAGT+GGG 0.661646 tig0022346:+54389 None:intergenic
TGAGGTCTGCAAAGAATCAG+GGG 0.662290 tig0022346:+54049 None:intergenic
ACAGAATCAAATCGTACTGG+TGG 0.662330 tig0022346:+45179 None:intergenic
GGAGCCTTGGAAGAAAGAGA+CGG 0.664365 tig0022346:+54903 None:intergenic
GCAGATGAAGTAGGTGCGAG+GGG 0.665000 tig0022346:+54245 None:intergenic
TGATTCTGTCCGCAGCAGTG+CGG 0.668650 tig0022346:-45165 Msa1399250:CDS
CACGATCCAAATCGGCACGA+CGG 0.668945 tig0022346:+54950 None:intergenic
CCAGTCCTTAGGCCTTTGCG+GGG 0.670167 tig0022346:+45283 None:intergenic
TTTGCAAACACAAATCAGAG+TGG 0.673304 tig0022346:-54674 Msa1399250:CDS
GTCTTAACGAGATCATGGAA+AGG 0.674758 tig0022346:-51798 Msa1399250:CDS
ATGATGCGCAAGAAACCCAA+AGG 0.676390 tig0022346:-48580 Msa1399250:intron
TGTATCATCCAAGTTGACAA+CGG 0.678444 tig0022346:-51623 Msa1399250:CDS
AACTCAACCCTACAGCAGGT+CGG 0.680320 tig0022346:-53248 Msa1399250:CDS
ACTGGAAGTCCAGATGAAGT+GGG 0.681287 tig0022346:+53936 None:intergenic
CCTAATGGAGCGACACAGGG+AGG 0.684964 tig0022346:-53515 Msa1399250:CDS
GATAACCTTCATCTCAACAA+GGG 0.685559 tig0022346:-44596 None:intergenic
AGCTGAGAGGACGTTCCTCG+AGG 0.695606 tig0022346:+54323 None:intergenic
GGGTATGGCAACATGCCTCG+AGG 0.698796 tig0022346:-54338 Msa1399250:CDS
GAGTTGTGCATCTTTCTGTG+TGG 0.700926 tig0022346:-44951 Msa1399250:three_prime_UTR
TCCCCACCTGATGAGATCGG+GGG 0.716657 tig0022346:-44737 Msa1399250:three_prime_UTR
ATCATCCAAGTTGACAACGG+AGG 0.723347 tig0022346:-51620 Msa1399250:CDS
GAATCAACAAAGTCCCTATG+CGG 0.723875 tig0022346:+48650 None:intergenic
GGTCTGCAAAGAATCAGGGG+TGG 0.737761 tig0022346:+54052 None:intergenic
ATTGCTTGAGCTGAAAAGTG+GGG 0.763163 tig0022346:+45307 None:intergenic
TAGAGATGGGAAAATCACCG+GGG 0.788722 tig0022346:-53808 Msa1399250:CDS
TGCATATGCAGTGATCATGG+TGG 0.802888 tig0022346:-46811 Msa1399250:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCTTATATATTGATTAATT+TGG - tig0022346:47638-47657 Msa1399250:intron 10.0%
!! ATTATAAAAATTAACGTTAT+AGG + tig0022346:48104-48123 None:intergenic 10.0%
!!! ATAACGTTAATTTTTATAAT+TGG - tig0022346:48104-48123 Msa1399250:intron 10.0%
!!! CATTATTTTATTGTATTTAT+AGG - tig0022346:48325-48344 Msa1399250:intron 10.0%
!!! ATTATCATATTTGTTTTAAA+TGG + tig0022346:49010-49029 None:intergenic 10.0%
!!! ATTTAAAACAAATATGATAA+TGG - tig0022346:49009-49028 Msa1399250:intron 10.0%
!!! TTTAAAACAAATATGATAAT+GGG - tig0022346:49010-49029 Msa1399250:intron 10.0%
!! ATATATATATATATTGAATG+GGG + tig0022346:49444-49463 None:intergenic 10.0%
!! ATTTGTAACTATATAATTAA+TGG - tig0022346:50406-50425 Msa1399250:intron 10.0%
!! TATTATTATTCTTATCTATA+CGG - tig0022346:50509-50528 Msa1399250:intron 10.0%
!!! GTTATTTATTTGTTTAAAAT+TGG - tig0022346:52875-52894 Msa1399250:intron 10.0%
!! AAAAAAAATTATATTGTTGT+GGG + tig0022346:53542-53561 None:intergenic 10.0%
!! AAAAAAAAATTATATTGTTG+TGG + tig0022346:53543-53562 None:intergenic 10.0%
!! AAAGAAAGAAATAAAGAAAT+TGG - tig0022346:44621-44640 Msa1399250:three_prime_UTR 15.0%
!! AGAAGTTATTAAGATTAAAA+AGG + tig0022346:44991-45010 None:intergenic 15.0%
!! TAGTAATTGAAATGTAATTT+GGG - tig0022346:47387-47406 Msa1399250:intron 15.0%
!!! TAAGGATTTAAAATATATGT+AGG - tig0022346:47501-47520 Msa1399250:intron 15.0%
!!! ATAAATTTGAAATTACCAAA+GGG + tig0022346:48613-48632 None:intergenic 15.0%
!!! TATAAATTTGAAATTACCAA+AGG + tig0022346:48614-48633 None:intergenic 15.0%
!! TAAATAAAAAATCACTTGAA+AGG + tig0022346:48650-48669 None:intergenic 15.0%
!! TTGACATTAAATTAGATATA+TGG - tig0022346:49039-49058 Msa1399250:intron 15.0%
!! TATATATATATATTGAATGG+GGG + tig0022346:49443-49462 None:intergenic 15.0%
!!! TATGTTTTTCTTGTATTATA+TGG - tig0022346:49463-49482 Msa1399250:intron 15.0%
!! AGATAAGAATAATAATATAC+CGG + tig0022346:50506-50525 None:intergenic 15.0%
!! AAAAATGATAATCCAAAATT+AGG - tig0022346:50728-50747 Msa1399250:intron 15.0%
!! TGTTCATCTATAAATTATTT+GGG + tig0022346:51982-52001 None:intergenic 15.0%
!! ATAAAATTCTATTAAGTGAA+AGG + tig0022346:52219-52238 None:intergenic 15.0%
!!! TATTTGTTTAAAATTGGTTT+TGG - tig0022346:52881-52900 Msa1399250:intron 15.0%
!!! GTGATGTTATTTTAATATTT+TGG - tig0022346:53303-53322 Msa1399250:intron 15.0%
!!! ACAAAACATATAATTTTAAC+AGG - tig0022346:53586-53605 Msa1399250:CDS 15.0%
!! AATAATGTTTGTAAAACAAA+AGG - tig0022346:53630-53649 Msa1399250:intron 15.0%
!!! AAGTCTTTTAAGATTGATTA+CGG + tig0022346:46867-46886 None:intergenic 20.0%
!! TAATCAATCTTAAAAGACTT+CGG - tig0022346:46867-46886 Msa1399250:intron 20.0%
!!! AGAATTTTAAAAAGGCATAA+AGG + tig0022346:47235-47254 None:intergenic 20.0%
!!! AACAGGATAGAATTTTAAAA+AGG + tig0022346:47243-47262 None:intergenic 20.0%
!! CTAGTAATTGAAATGTAATT+TGG - tig0022346:47386-47405 Msa1399250:intron 20.0%
!! AATTTGGAGAAAGTAAAAAT+AGG - tig0022346:47654-47673 Msa1399250:intron 20.0%
!! AAAAGGAGAAAATAAAAGAA+AGG + tig0022346:47940-47959 None:intergenic 20.0%
!! AAAAAGATTGAATTATACCA+AGG - tig0022346:48350-48369 Msa1399250:intron 20.0%
!! AAAAGATTGAATTATACCAA+GGG - tig0022346:48351-48370 Msa1399250:intron 20.0%
!! ATAAAATTAGAGACATGAAA+AGG + tig0022346:48697-48716 None:intergenic 20.0%
!! ATATATGGTTCTTCATAATA+GGG - tig0022346:49054-49073 Msa1399250:intron 20.0%
!! AAAGATATGAAAGTTGAAAT+TGG - tig0022346:49125-49144 Msa1399250:intron 20.0%
!! AAGTAAATAAATGCAACAAA+AGG + tig0022346:49207-49226 None:intergenic 20.0%
!! AAAATTAAGAATCAATTTGC+AGG + tig0022346:49263-49282 None:intergenic 20.0%
!! AAATTAAGCAAAATAAGAGA+AGG + tig0022346:49355-49374 None:intergenic 20.0%
!!! TTTTGAGATTTTTTTGTGAA+AGG - tig0022346:49670-49689 Msa1399250:intron 20.0%
!!! TATCTCTTATAACCTAATTT+TGG + tig0022346:50743-50762 None:intergenic 20.0%
!! TAAGAGATATTATATGATGT+TGG - tig0022346:50754-50773 Msa1399250:intron 20.0%
!! TTTATAACAAAAGTGATGAT+GGG - tig0022346:51095-51114 Msa1399250:intron 20.0%
!! ATAAAATGGTGATTATTTGT+AGG - tig0022346:51393-51412 Msa1399250:intron 20.0%
!!! TACAAATAGAAATTTTGTCT+TGG + tig0022346:51522-51541 None:intergenic 20.0%
!!! CAAAAGTGTAATACAAATAA+GGG + tig0022346:51585-51604 None:intergenic 20.0%
!! AATTATTTGGGAAAAAATGA+AGG + tig0022346:51970-51989 None:intergenic 20.0%
!! CTGTTCATCTATAAATTATT+TGG + tig0022346:51983-52002 None:intergenic 20.0%
!! ACTTACGTAGAAAATTTAAA+TGG - tig0022346:52681-52700 Msa1399250:CDS 20.0%
!! AAAAAAAAAAAAAGGTGGTT+GGG - tig0022346:53734-53753 Msa1399250:intron 20.0%
!!! ACATTTGTTTATACTTTTAC+AGG - tig0022346:54345-54364 Msa1399250:CDS 20.0%
!! AAGAATACATTACAAATAAG+AGG + tig0022346:54896-54915 None:intergenic 20.0%
! GGTGATTGATTATTATTGAT+TGG - tig0022346:44722-44741 Msa1399250:three_prime_UTR 25.0%
! AGATTAAAAAGGAAAGAAAG+AGG + tig0022346:44980-44999 None:intergenic 25.0%
! ATTCATTCATTCACACTATA+GGG - tig0022346:45024-45043 Msa1399250:three_prime_UTR 25.0%
!!! ATTGCTTCTGATTCATTTTT+CGG - tig0022346:45631-45650 Msa1399250:intron 25.0%
!!! GAAATATACAAGAGTATTCA+TGG - tig0022346:45975-45994 Msa1399250:intron 25.0%
! TATCATTATCTTGATCAGAT+AGG + tig0022346:46247-46266 None:intergenic 25.0%
!! ATGTTATTTGGAAGTATACT+TGG + tig0022346:46341-46360 None:intergenic 25.0%
! ATATCAGGAAGAATGTTATT+TGG + tig0022346:46353-46372 None:intergenic 25.0%
!! TTCCTCTTTTTATCTTTGAA+AGG - tig0022346:46507-46526 Msa1399250:intron 25.0%
! AGACTGTAATCAAGAATATT+TGG + tig0022346:47055-47074 None:intergenic 25.0%
!! TGTGCTCTATTTTATCTTTT+TGG - tig0022346:47268-47287 Msa1399250:intron 25.0%
! TTATTGTACTCGTGAAATAA+TGG - tig0022346:47434-47453 Msa1399250:intron 25.0%
!! ATTTGATTTATTGAGCTCTA+AGG - tig0022346:47483-47502 Msa1399250:intron 25.0%
! ATAGAACATATCTATTTCGT+AGG + tig0022346:47790-47809 None:intergenic 25.0%
! GTATTTATACAATAGAATCG+TGG - tig0022346:47836-47855 Msa1399250:intron 25.0%
!!! TCCTTTTTTAAACGAATTTC+TGG - tig0022346:47953-47972 Msa1399250:intron 25.0%
! ACCAGAAATTCGTTTAAAAA+AGG + tig0022346:47957-47976 None:intergenic 25.0%
! TGGCTCAATATATTAATTTC+AGG - tig0022346:48124-48143 Msa1399250:intron 25.0%
! GAAGATAAATATAAGCAAGT+TGG - tig0022346:48170-48189 Msa1399250:intron 25.0%
!! TCTAGTCAAATACAATTTTC+AGG - tig0022346:48480-48499 Msa1399250:intron 25.0%
!!! TGTTGTTGATATTTAGTTTG+AGG - tig0022346:48739-48758 Msa1399250:CDS 25.0%
!! TTAACTTTTGAACTACTTTG+TGG - tig0022346:48892-48911 Msa1399250:CDS 25.0%
! GATATATGGTTCTTCATAAT+AGG - tig0022346:49053-49072 Msa1399250:intron 25.0%
! CAAATGTTGTATTAGTGATT+TGG - tig0022346:49094-49113 Msa1399250:intron 25.0%
!! GCAACAAAAGGATTTTTATT+TGG + tig0022346:49195-49214 None:intergenic 25.0%
!!! TTTATTGTTTTTCACATGCT+AGG - tig0022346:49299-49318 Msa1399250:intron 25.0%
! AAAATGATATGCAAATTGTG+TGG - tig0022346:49634-49653 Msa1399250:intron 25.0%
!! AGGCTAATTATCATTTTATC+TGG - tig0022346:49720-49739 Msa1399250:intron 25.0%
!! GGCTAATTATCATTTTATCT+GGG - tig0022346:49721-49740 Msa1399250:intron 25.0%
!! GCTAATTATCATTTTATCTG+GGG - tig0022346:49722-49741 Msa1399250:intron 25.0%
!! CTAATTATCATTTTATCTGG+GGG - tig0022346:49723-49742 Msa1399250:intron 25.0%
! TTGGATCGAAATATGATTTA+TGG - tig0022346:49965-49984 Msa1399250:intron 25.0%
! TGATTTATGGTAGAACATTA+TGG - tig0022346:49978-49997 Msa1399250:intron 25.0%
!! GATCATTTTGAACAGTTATA+TGG - tig0022346:50699-50718 Msa1399250:intron 25.0%
! TTTGAACAGTTATATGGTTT+AGG - tig0022346:50705-50724 Msa1399250:intron 25.0%
!! TGTTGGTGAGATTAAAATTA+TGG - tig0022346:50771-50790 Msa1399250:intron 25.0%
!! GTTGGTGAGATTAAAATTAT+GGG - tig0022346:50772-50791 Msa1399250:intron 25.0%
! TGAAGAATGTTGGAAATATA+TGG - tig0022346:50838-50857 Msa1399250:intron 25.0%
! GTTTATAACAAAAGTGATGA+TGG - tig0022346:51094-51113 Msa1399250:intron 25.0%
! ATCTTAAAATCCATACCTTT+GGG + tig0022346:51257-51276 None:intergenic 25.0%
! AATCTTAAAATCCATACCTT+TGG + tig0022346:51258-51277 None:intergenic 25.0%
! GTGATTGTCATTGTATAAAA+TGG - tig0022346:51379-51398 Msa1399250:intron 25.0%
!! GCAAAAGTGTAATACAAATA+AGG + tig0022346:51586-51605 None:intergenic 25.0%
! AACTATACGATCAGAAAAAT+GGG + tig0022346:51709-51728 None:intergenic 25.0%
! TAACTATACGATCAGAAAAA+TGG + tig0022346:51710-51729 None:intergenic 25.0%
!! TTTTCTGATCGTATAGTTAA+CGG - tig0022346:51711-51730 Msa1399250:intron 25.0%
!! CACAAAAAAGGTAACTTTTT+CGG - tig0022346:52434-52453 Msa1399250:intron 25.0%
! AAAGGAAACATAGTGAAAAT+GGG - tig0022346:52501-52520 Msa1399250:intron 25.0%
!! CTTTAATTCTATTTCTTCAG+AGG + tig0022346:52565-52584 None:intergenic 25.0%
!! CTCTGAAGAAATAGAATTAA+AGG - tig0022346:52563-52582 Msa1399250:intron 25.0%
! CAGTTGTTTATATGCAAAAA+AGG - tig0022346:52591-52610 Msa1399250:intron 25.0%
! AACTAGTTCATAATATACTG+TGG + tig0022346:52707-52726 None:intergenic 25.0%
! ATGCATTAAAAACTCTTTGA+TGG - tig0022346:52732-52751 Msa1399250:intron 25.0%
! AAATAACATGACGCATATAT+TGG + tig0022346:52929-52948 None:intergenic 25.0%
!!! GCGTCATGTTATTTTTTTTT+TGG - tig0022346:52935-52954 Msa1399250:intron 25.0%
!! TTAGATAGATTTTGTGATCT+TGG - tig0022346:52960-52979 Msa1399250:intron 25.0%
! GATCTTGGAAAATAATTGTT+TGG - tig0022346:52975-52994 Msa1399250:intron 25.0%
! AATATCATCATTTGTGTCAA+AGG + tig0022346:53087-53106 None:intergenic 25.0%
!!! ATGATGATATTGATTCAGTT+TGG - tig0022346:53096-53115 Msa1399250:CDS 25.0%
!!! TGATGATATTGATTCAGTTT+GGG - tig0022346:53097-53116 Msa1399250:CDS 25.0%
!!! AGTTTTATCATGTTGAGTAA+TGG + tig0022346:53405-53424 None:intergenic 25.0%
!!! TTATTTAAGAGCCCTTTTTT+GGG + tig0022346:53615-53634 None:intergenic 25.0%
!!! ATTATTTAAGAGCCCTTTTT+TGG + tig0022346:53616-53635 None:intergenic 25.0%
! AATGTTTGTAAAACAAAAGG+TGG - tig0022346:53633-53652 Msa1399250:intron 25.0%
!!! TTTTTTTTTTTTTGGTGTCC+GGG + tig0022346:53727-53746 None:intergenic 25.0%
!!! CTTTTTTTTTTTTTGGTGTC+CGG + tig0022346:53728-53747 None:intergenic 25.0%
! ACACCAAAAAAAAAAAAAGG+TGG - tig0022346:53729-53748 Msa1399250:intron 25.0%
!!! CAACCACCTTTTTTTTTTTT+TGG + tig0022346:53735-53754 None:intergenic 25.0%
! CAAAAAAAAAAAAAGGTGGT+TGG - tig0022346:53733-53752 Msa1399250:intron 25.0%
! TTATGACTGATATGAATTCA+TGG - tig0022346:54209-54228 Msa1399250:CDS 25.0%
! GATATGAATTCATGGTTATT+TGG - tig0022346:54217-54236 Msa1399250:CDS 25.0%
! AGAAATAACACATGAATTTG+TGG + tig0022346:54812-54831 None:intergenic 25.0%
! TCCAATTTAAGAAATCAAGT+GGG + tig0022346:54995-55014 None:intergenic 25.0%
! TTCCAATTTAAGAAATCAAG+TGG + tig0022346:54996-55015 None:intergenic 25.0%
! ATTTCTTAAATTGGAAGTGA+AGG - tig0022346:55000-55019 Msa1399250:CDS 25.0%
! GAGTTGATTGAAGAGAAAAA+AGG - tig0022346:44662-44681 Msa1399250:three_prime_UTR 30.0%
TGATTGAAGAGAAAAAAGGA+AGG - tig0022346:44666-44685 Msa1399250:three_prime_UTR 30.0%
GATTGAAGAGAAAAAAGGAA+GGG - tig0022346:44667-44686 Msa1399250:three_prime_UTR 30.0%
!!! GGAGTGGTAATTTTGAAATA+TGG - tig0022346:44701-44720 Msa1399250:three_prime_UTR 30.0%
CATTCATTCATTCACACTAT+AGG - tig0022346:45023-45042 Msa1399250:three_prime_UTR 30.0%
GAAGTAGAAAATATACCTCT+TGG + tig0022346:46072-46091 None:intergenic 30.0%
! AAAAAAGCATGCTAGTTCTT+TGG + tig0022346:46445-46464 None:intergenic 30.0%
!!! AAAGAACTAGCATGCTTTTT+TGG - tig0022346:46444-46463 Msa1399250:intron 30.0%
!!! AAGAACTAGCATGCTTTTTT+GGG - tig0022346:46445-46464 Msa1399250:intron 30.0%
CACCTTTCAAAGATAAAAAG+AGG + tig0022346:46512-46531 None:intergenic 30.0%
AGAAACATGTCATTCATTGA+GGG + tig0022346:46921-46940 None:intergenic 30.0%
AAGAAACATGTCATTCATTG+AGG + tig0022346:46922-46941 None:intergenic 30.0%
ATTTACATGTGCTTCCTAAA+CGG - tig0022346:47006-47025 Msa1399250:intron 30.0%
TTCTTGATTACAGTCTAATC+CGG - tig0022346:47059-47078 Msa1399250:intron 30.0%
! TTTACTCTTTTGTTAACTGC+AGG - tig0022346:47112-47131 Msa1399250:intron 30.0%
AGAACTTGAGAAAGAAATAG+TGG - tig0022346:47139-47158 Msa1399250:intron 30.0%
! GAAGAATTCTATTTTCTCTC+GGG + tig0022346:47168-47187 None:intergenic 30.0%
! GGAAGAATTCTATTTTCTCT+CGG + tig0022346:47169-47188 None:intergenic 30.0%
AAATAGAGCACAACTTAAAC+AGG + tig0022346:47260-47279 None:intergenic 30.0%
! AGTTTCTTTTCTCGATAAAC+CGG - tig0022346:47292-47311 Msa1399250:intron 30.0%
TGTACACATAAACAAAACAC+CGG + tig0022346:47314-47333 None:intergenic 30.0%
GCTATATCAGTACATCTATA+TGG + tig0022346:47367-47386 None:intergenic 30.0%
! ATAGTAAGGAATGGTTAGTT+TGG + tig0022346:47566-47585 None:intergenic 30.0%
ATTAGGTCTATAGTAAGGAA+TGG + tig0022346:47575-47594 None:intergenic 30.0%
TGTTCATTAGGTCTATAGTA+AGG + tig0022346:47580-47599 None:intergenic 30.0%
TCTACGTATTTGTGTTCATT+AGG + tig0022346:47592-47611 None:intergenic 30.0%
AGAAAGTAAAAATAGGCTCA+GGG - tig0022346:47661-47680 Msa1399250:intron 30.0%
! AAGGGTATAACGTCTATTAA+TGG + tig0022346:47708-47727 None:intergenic 30.0%
! CTAATGTGTTTTTCTCTTCT+AGG + tig0022346:47865-47884 None:intergenic 30.0%
! TCTTGTATATAACCTTTTGC+AGG + tig0022346:47986-48005 None:intergenic 30.0%
TTAACGTTATAGGTCTGATA+AGG + tig0022346:48094-48113 None:intergenic 30.0%
TGATATAGTGATGCAAAATG+CGG + tig0022346:48305-48324 None:intergenic 30.0%
GTATTTGACTAGATCAGATA+TGG + tig0022346:48473-48492 None:intergenic 30.0%
TGGTCAAATCTCTAAATGAA+CGG - tig0022346:48539-48558 Msa1399250:intron 30.0%
! TTTTCATGCTGATACAAAAC+CGG + tig0022346:48789-48808 None:intergenic 30.0%
TACAACAAAGCAAAGAGAAA+TGG + tig0022346:49391-49410 None:intergenic 30.0%
! CTAAAGGATTAATTTGAGTG+AGG + tig0022346:49489-49508 None:intergenic 30.0%
CTCACTCAAATTAATCCTTT+AGG - tig0022346:49487-49506 Msa1399250:intron 30.0%
ATTAAATGAAGTTGGCTACA+TGG + tig0022346:50015-50034 None:intergenic 30.0%
ATGTAGCCAACTTCATTTAA+TGG - tig0022346:50014-50033 Msa1399250:intron 30.0%
TGTAGCCAACTTCATTTAAT+GGG - tig0022346:50015-50034 Msa1399250:intron 30.0%
! CTTTTCCCATTAAATGAAGT+TGG + tig0022346:50023-50042 None:intergenic 30.0%
CAACTTCATTTAATGGGAAA+AGG - tig0022346:50021-50040 Msa1399250:intron 30.0%
!! TGTTGTTGTTGTTGCATTTT+TGG - tig0022346:50053-50072 Msa1399250:intron 30.0%
TACATGTGATGCACAATTTA+AGG - tig0022346:50230-50249 Msa1399250:intron 30.0%
! GTCAATTTTTACCTGTATTG+AGG - tig0022346:50257-50276 Msa1399250:intron 30.0%
TAACAAAAGACTAAGCAAAC+TGG - tig0022346:50344-50363 Msa1399250:intron 30.0%
ACTCAGTTGAATATTGCAAT+TGG - tig0022346:50449-50468 Msa1399250:intron 30.0%
CTCAGTTGAATATTGCAATT+GGG - tig0022346:50450-50469 Msa1399250:intron 30.0%
CAACATTCTTCAAAAGAGAA+TGG + tig0022346:50830-50849 None:intergenic 30.0%
!! CATTCTCTTTTGAAGAATGT+TGG - tig0022346:50828-50847 Msa1399250:intron 30.0%
TCTGATTTATCATCACTCTT+AGG + tig0022346:51031-51050 None:intergenic 30.0%
!! AAAAAGAATAACTTGCTAGG+TGG + tig0022346:51611-51630 None:intergenic 30.0%
! ACCTAGCAAGTTATTCTTTT+TGG - tig0022346:51610-51629 Msa1399250:CDS 30.0%
! CCTAGCAAGTTATTCTTTTT+GGG - tig0022346:51611-51630 Msa1399250:CDS 30.0%
TCCTATTGATCAAAATCACA+GGG + tig0022346:51665-51684 None:intergenic 30.0%
ATCCTATTGATCAAAATCAC+AGG + tig0022346:51666-51685 None:intergenic 30.0%
!! GTGATTTTGATCAATAGGAT+AGG - tig0022346:51666-51685 Msa1399250:CDS 30.0%
ACTATACGATCAGAAAAATG+GGG + tig0022346:51708-51727 None:intergenic 30.0%
!! TTCTGTCAAGTTGGAAAAAT+AGG + tig0022346:52101-52120 None:intergenic 30.0%
TTAAGTAAAGAGAGAAAGCA+TGG + tig0022346:52280-52299 None:intergenic 30.0%
GAAAGGAAACATAGTGAAAA+TGG - tig0022346:52500-52519 Msa1399250:intron 30.0%
AAAGGAAATAGAACACAATG+AGG - tig0022346:52609-52628 Msa1399250:intron 30.0%
! TATGACATTTAGCATTGAAG+TGG + tig0022346:52651-52670 None:intergenic 30.0%
TTCAATGCTAAATGTCATAC+AGG - tig0022346:52652-52671 Msa1399250:CDS 30.0%
TCAATGCTAAATGTCATACA+GGG - tig0022346:52653-52672 Msa1399250:CDS 30.0%
! CATGATACAGAATTGAGTTT+TGG - tig0022346:52799-52818 Msa1399250:intron 30.0%
! AGTTTTTGACGAACCTAATT+GGG - tig0022346:53058-53077 Msa1399250:intron 30.0%
!! GATGATATTGATTCAGTTTG+GGG - tig0022346:53098-53117 Msa1399250:CDS 30.0%
! TGCAAAATCCTTTCTTTTGA+AGG - tig0022346:53182-53201 Msa1399250:CDS 30.0%
! GCAAAATCCTTTCTTTTGAA+GGG - tig0022346:53183-53202 Msa1399250:CDS 30.0%
! TAACTTGTCAAAACCAATGA+TGG - tig0022346:53237-53256 Msa1399250:CDS 30.0%
AGTAATTAAACCACCATCAT+TGG + tig0022346:53253-53272 None:intergenic 30.0%
!! CATATTATCACTTTTCTGCT+AGG + tig0022346:53428-53447 None:intergenic 30.0%
ATTCTTCAATTTGAGGAGAA+AGG + tig0022346:53462-53481 None:intergenic 30.0%
! CTTGGTAATTCTTCAATTTG+AGG + tig0022346:53469-53488 None:intergenic 30.0%
CTCAAATTGAAGAATTACCA+AGG - tig0022346:53467-53486 Msa1399250:CDS 30.0%
TTTATAACAAGCTGATACCT+TGG + tig0022346:53487-53506 None:intergenic 30.0%
GACAATGCATAATATATGCA+AGG - tig0022346:53687-53706 Msa1399250:intron 30.0%
!!! TTTTTTTTTTTTGGTGTCCG+GGG + tig0022346:53726-53745 None:intergenic 30.0%
CGGACACCAAAAAAAAAAAA+AGG - tig0022346:53726-53745 Msa1399250:intron 30.0%
! TCAAAGTATTCCATAGCTAT+GGG - tig0022346:53781-53800 Msa1399250:CDS 30.0%
AGACTCTAGTTATCAAAGTT+TGG - tig0022346:53910-53929 Msa1399250:CDS 30.0%
AGTAGATTCAATTAGACTCA+CGG - tig0022346:53968-53987 Msa1399250:CDS 30.0%
!!! ACTGTCATTTTAGGCATTTT+TGG + tig0022346:54029-54048 None:intergenic 30.0%
AAAAATGCCTAAAATGACAG+TGG - tig0022346:54028-54047 Msa1399250:CDS 30.0%
! GACAACTATTTCTTTAGTTC+TGG - tig0022346:54391-54410 Msa1399250:CDS 30.0%
!!! TGTGGTGAAGATGTTTTAAT+GGG + tig0022346:54433-54452 None:intergenic 30.0%
! CAATTATCAGATCCTTTTCT+AGG + tig0022346:54763-54782 None:intergenic 30.0%
CTAGAAAAGGATCTGATAAT+TGG - tig0022346:54761-54780 Msa1399250:intron 30.0%
TCCCACTTGATTTCTTAAAT+TGG - tig0022346:54991-55010 Msa1399250:CDS 30.0%
! TGAAGGTCTGTTCATATTTT+TGG - tig0022346:55017-55036 Msa1399250:exon 30.0%
AAAGGAAGGGAAAATAGAAC+AGG - tig0022346:44680-44699 Msa1399250:three_prime_UTR 35.0%
CAGACAGATACCAATTGAAT+TGG + tig0022346:44756-44775 None:intergenic 35.0%
TCTTTCTACTTGTGCTTCAA+TGG - tig0022346:44794-44813 Msa1399250:three_prime_UTR 35.0%
TGTTTGCAAATTCCCAAATC+TGG + tig0022346:45135-45154 None:intergenic 35.0%
TTTGCAAACACAAATCAGAG+TGG - tig0022346:45145-45164 Msa1399250:CDS 35.0%
! AATGCAGCTTTAACCATTTC+AGG + tig0022346:45244-45263 None:intergenic 35.0%
ATGGTTAAAGCTGCATTGTA+TGG - tig0022346:45247-45266 Msa1399250:CDS 35.0%
!!! TGAGAGTTTTGATTTGGAAG+AGG + tig0022346:45364-45383 None:intergenic 35.0%
AGCAGATGTTGTAATTGCAA+CGG + tig0022346:45542-45561 None:intergenic 35.0%
!! CTTCTGATTCATTTTTCGGA+GGG - tig0022346:45635-45654 Msa1399250:intron 35.0%
!! TTCTGATTCATTTTTCGGAG+GGG - tig0022346:45636-45655 Msa1399250:intron 35.0%
!!! TGTGGAGAATTGTTTTGGTT+AGG + tig0022346:45688-45707 None:intergenic 35.0%
AACCAAAACAATTCTCCACA+AGG - tig0022346:45688-45707 Msa1399250:intron 35.0%
! ATCCTTGTGGAGAATTGTTT+TGG + tig0022346:45693-45712 None:intergenic 35.0%
AAGTAGACAGAGATAGAGAT+GGG - tig0022346:45998-46017 Msa1399250:intron 35.0%
CTACTTCCTTTCCATTTGTT+TGG - tig0022346:46085-46104 Msa1399250:intron 35.0%
TTACTCCTGATCCAAACAAA+TGG + tig0022346:46099-46118 None:intergenic 35.0%
! TTTTTCTACCTCTAGTGTTC+TGG - tig0022346:46132-46151 Msa1399250:intron 35.0%
! CCTCTGGAAAACATAAAACA+TGG + tig0022346:46205-46224 None:intergenic 35.0%
! CCATGTTTTATGTTTTCCAG+AGG - tig0022346:46202-46221 Msa1399250:intron 35.0%
!!! AGAACTAGCATGCTTTTTTG+GGG - tig0022346:46446-46465 Msa1399250:intron 35.0%
!!! CATGCTTTTTTGGGGTATTA+TGG - tig0022346:46454-46473 Msa1399250:intron 35.0%
!! AAAGGTGTTCAACAACATCA+AGG - tig0022346:46525-46544 Msa1399250:intron 35.0%
! AAGGTGTTCAACAACATCAA+GGG - tig0022346:46526-46545 Msa1399250:intron 35.0%
!!! TTTTGAGTTCCTTCATCAGA+TGG + tig0022346:46621-46640 None:intergenic 35.0%
GAAATCCAAAATTCCAGTCT+TGG - tig0022346:46650-46669 Msa1399250:intron 35.0%
TCAACATTATGTTGTGCCTT+AGG - tig0022346:46784-46803 Msa1399250:CDS 35.0%
TTATTCCCTAAAACCTCCTA+AGG + tig0022346:46803-46822 None:intergenic 35.0%
AATCTTAAAAGACTTCGGAC+AGG - tig0022346:46872-46891 Msa1399250:intron 35.0%
ATCTTAAAAGACTTCGGACA+GGG - tig0022346:46873-46892 Msa1399250:intron 35.0%
AAACATGTCATTCATTGAGG+GGG + tig0022346:46919-46938 None:intergenic 35.0%
GAAACATGTCATTCATTGAG+GGG + tig0022346:46920-46939 None:intergenic 35.0%
AATAGGTAAGCAAACCGTTT+AGG + tig0022346:47023-47042 None:intergenic 35.0%
! TAAACGGTTTGCTTACCTAT+TGG - tig0022346:47022-47041 Msa1399250:intron 35.0%
ATCCGGTTCAATTTGATCAA+AGG - tig0022346:47076-47095 Msa1399250:intron 35.0%
TGCCTTTGATCAAATTGAAC+CGG + tig0022346:47081-47100 None:intergenic 35.0%
! CAAGTTCTTGCATTTTTGCA+CGG + tig0022346:47190-47209 None:intergenic 35.0%
!! TACAGTGTATCTTGATTTGC+AGG - tig0022346:47330-47349 Msa1399250:intron 35.0%
TCAGTACATCTATATGGTTC+TGG + tig0022346:47361-47380 None:intergenic 35.0%
GAGACAGATTGTTTACCATT+GGG - tig0022346:47409-47428 Msa1399250:intron 35.0%
ACGAGTACAATAAATCCCAA+TGG + tig0022346:47427-47446 None:intergenic 35.0%
!! ACTCGTGAAATAATGGATCT+CGG - tig0022346:47441-47460 Msa1399250:intron 35.0%
GAGAAAGTAAAAATAGGCTC+AGG - tig0022346:47660-47679 Msa1399250:intron 35.0%
ATATGTTCTATTGTGAACCC+AGG - tig0022346:47799-47818 Msa1399250:intron 35.0%
GATATCTGCTGATAAACATG+AGG - tig0022346:48043-48062 Msa1399250:intron 35.0%
! TGTATCATCCAAGTTGACAA+CGG - tig0022346:48196-48215 Msa1399250:intron 35.0%
CATACAGGTGCAAGAAAATA+TGG - tig0022346:48238-48257 Msa1399250:intron 35.0%
GATATAGTGATGCAAAATGC+GGG + tig0022346:48304-48323 None:intergenic 35.0%
AAATACTGATGACACTGTAC+AGG - tig0022346:48397-48416 Msa1399250:intron 35.0%
GGAAGGAAAAAAACTCATGA+TGG + tig0022346:48452-48471 None:intergenic 35.0%
TTGACTAGATCAGATATGGA+AGG + tig0022346:48469-48488 None:intergenic 35.0%
CAATTCTGACTTTGATGAAC+TGG - tig0022346:48519-48538 Msa1399250:intron 35.0%
ATTAGAGACATGAAAAGGCT+TGG + tig0022346:48692-48711 None:intergenic 35.0%
! CAACTAATATCAAGTTGTGC+TGG + tig0022346:48821-48840 None:intergenic 35.0%
ATATTAGTTGCCTGATCAAG+TGG - tig0022346:48831-48850 Msa1399250:CDS 35.0%
AAGGTGATAACTGAATCAAG+AGG + tig0022346:49336-49355 None:intergenic 35.0%
CTCAAATTAATCCTTTAGGC+TGG - tig0022346:49491-49510 Msa1399250:intron 35.0%
TGGGATAAGCTTGAAGATAA+AGG - tig0022346:49556-49575 Msa1399250:intron 35.0%
TGGATACATGACTCTCATAT+TGG - tig0022346:49751-49770 Msa1399250:intron 35.0%
AGCACCTATAGTAGAAAAGA+TGG - tig0022346:49781-49800 Msa1399250:intron 35.0%
ACCTATAGTAGAAAAGATGG+TGG - tig0022346:49784-49803 Msa1399250:intron 35.0%
! TCCACCATCTTTTCTACTAT+AGG + tig0022346:49788-49807 None:intergenic 35.0%
!! TAGAAAAGATGGTGGAAACT+GGG - tig0022346:49792-49811 Msa1399250:intron 35.0%
AGATCTAGAGATTAACGAGT+TGG - tig0022346:49946-49965 Msa1399250:intron 35.0%
GTAGAACATTATGGCGTAAT+TGG - tig0022346:49987-50006 Msa1399250:intron 35.0%
TCATTTAATGGGAAAAGGCT+TGG - tig0022346:50026-50045 Msa1399250:intron 35.0%
!!! GTTGTTGCATTTTTGGTTTC+AGG - tig0022346:50060-50079 Msa1399250:intron 35.0%
!! GTCTTTTTGTTTAGTTCGCT+TGG - tig0022346:50149-50168 Msa1399250:intron 35.0%
TGTATTTACCCCTCTCTATT+AGG - tig0022346:50193-50212 Msa1399250:intron 35.0%
CATTCAATCCTAATAGAGAG+GGG + tig0022346:50204-50223 None:intergenic 35.0%
GCATTCAATCCTAATAGAGA+GGG + tig0022346:50205-50224 None:intergenic 35.0%
! ATTCAGTTTTGCCTCAATAC+AGG + tig0022346:50271-50290 None:intergenic 35.0%
TGAGGCAAAACTGAATTTCA+AGG - tig0022346:50275-50294 Msa1399250:CDS 35.0%
AAAATGCATGTGTTGTGAGT+AGG + tig0022346:50305-50324 None:intergenic 35.0%
! AAGAAGTATAGTTCAACAGC+TGG + tig0022346:50622-50641 None:intergenic 35.0%
AAGCTTACCTGTTTGTCTAA+TGG - tig0022346:50668-50687 Msa1399250:intron 35.0%
AACTCTTCCATTAGACAAAC+AGG + tig0022346:50678-50697 None:intergenic 35.0%
! ACTGCAATTTCCTCATTTTC+TGG - tig0022346:50797-50816 Msa1399250:intron 35.0%
CTGCTAGAAGAAAGAAAACA+GGG + tig0022346:50883-50902 None:intergenic 35.0%
TCTGCTAGAAGAAAGAAAAC+AGG + tig0022346:50884-50903 None:intergenic 35.0%
!!! TTTGGTTGCTTTTGTTTTGG+AGG + tig0022346:50956-50975 None:intergenic 35.0%
TCCAAAACAAAAGCAACCAA+AGG - tig0022346:50955-50974 Msa1399250:intron 35.0%
! AGTAACTCAAGTTGCTCATT+TGG - tig0022346:51302-51321 Msa1399250:CDS 35.0%
GATCACCACAAACTTGAAAA+AGG + tig0022346:51356-51375 None:intergenic 35.0%
ATTCCTTAATCATTGCCTTG+AGG - tig0022346:51543-51562 Msa1399250:intron 35.0%
TTCCTTAATCATTGCCTTGA+GGG - tig0022346:51544-51563 Msa1399250:intron 35.0%
!! CCCAAAAAGAATAACTTGCT+AGG + tig0022346:51614-51633 None:intergenic 35.0%
CCTATTGATCAAAATCACAG+GGG + tig0022346:51664-51683 None:intergenic 35.0%
! TTGTACGTTTTCCAACTCAA+AGG - tig0022346:51751-51770 Msa1399250:intron 35.0%
! TGTACGTTTTCCAACTCAAA+GGG - tig0022346:51752-51771 Msa1399250:intron 35.0%
TGTGTGTGTGTGTATAAACT+CGG + tig0022346:51842-51861 None:intergenic 35.0%
! AGTCATCACTTCAACAGTTT+TGG - tig0022346:51943-51962 Msa1399250:intron 35.0%
CTCAATACAAATGTGAGGAA+AGG + tig0022346:52045-52064 None:intergenic 35.0%
GTAGACTCAATACAAATGTG+AGG + tig0022346:52050-52069 None:intergenic 35.0%
AAAACCCATCTGTCAAAACT+CGG - tig0022346:52119-52138 Msa1399250:intron 35.0%
!! TTTACCGAGTTTTGACAGAT+GGG + tig0022346:52126-52145 None:intergenic 35.0%
!! ATTTACCGAGTTTTGACAGA+TGG + tig0022346:52127-52146 None:intergenic 35.0%
GTCAAAACTCGGTAAATATG+AGG - tig0022346:52130-52149 Msa1399250:intron 35.0%
ATGCGAACCTTCTCATATTT+GGG - tig0022346:52153-52172 Msa1399250:intron 35.0%
TGAAAGGTAGAATGATTGTG+TGG + tig0022346:52203-52222 None:intergenic 35.0%
! TTTATCATAGCTTTACCCGT+TGG - tig0022346:52239-52258 Msa1399250:intron 35.0%
ATGTCTCAAAAACTTCCAAC+GGG + tig0022346:52257-52276 None:intergenic 35.0%
GATGTCTCAAAAACTTCCAA+CGG + tig0022346:52258-52277 None:intergenic 35.0%
! AGTGGTTTTTGCAACTTGAA+AGG - tig0022346:52346-52365 Msa1399250:intron 35.0%
CTCAATCTTGTGCACAAAAA+AGG - tig0022346:52422-52441 Msa1399250:intron 35.0%
ATGCTCTCAAAATCCATGAA+TGG + tig0022346:52539-52558 None:intergenic 35.0%
CAATGCTAAATGTCATACAG+GGG - tig0022346:52654-52673 Msa1399250:CDS 35.0%
! TGTTGTTGTTATGCGTGATA+AGG - tig0022346:52823-52842 Msa1399250:intron 35.0%
GTTTATTCCCAACTGTAGAA+TGG - tig0022346:52848-52867 Msa1399250:intron 35.0%
AACCTTTCCATTCTACAGTT+GGG + tig0022346:52858-52877 None:intergenic 35.0%
TAACCTTTCCATTCTACAGT+TGG + tig0022346:52859-52878 None:intergenic 35.0%
! GAGTTTTTGACGAACCTAAT+TGG - tig0022346:53057-53076 Msa1399250:intron 35.0%
! GTTTTTGACGAACCTAATTG+GGG - tig0022346:53059-53078 Msa1399250:intron 35.0%
TTGACAAGTTAGAATACAGC+AGG + tig0022346:53228-53247 None:intergenic 35.0%
CTATCAAGTTAGAATCAAGC+AGG + tig0022346:53284-53303 None:intergenic 35.0%
CCTAGATCACTGGTATAAAT+AGG + tig0022346:53363-53382 None:intergenic 35.0%
CCTATTTATACCAGTGATCT+AGG - tig0022346:53360-53379 Msa1399250:intron 35.0%
GTTGAGTAATGGTACTAGTT+TGG + tig0022346:53394-53413 None:intergenic 35.0%
TTTAACAGGCTTCCCAAAAA+AGG - tig0022346:53600-53619 Msa1399250:CDS 35.0%
TTAACAGGCTTCCCAAAAAA+GGG - tig0022346:53601-53620 Msa1399250:intron 35.0%
! GTCAAAGTATTCCATAGCTA+TGG - tig0022346:53780-53799 Msa1399250:CDS 35.0%
TATGGGCAAAAAGACAATGT+TGG - tig0022346:53798-53817 Msa1399250:CDS 35.0%
GTAGATTCAATTAGACTCAC+GGG - tig0022346:53969-53988 Msa1399250:CDS 35.0%
TGATTGTGCCTTAGTATCAA+AGG - tig0022346:54273-54292 Msa1399250:CDS 35.0%
GATTGTGCCTTAGTATCAAA+GGG - tig0022346:54274-54293 Msa1399250:CDS 35.0%
CATCTAACCCTTTGATACTA+AGG + tig0022346:54284-54303 None:intergenic 35.0%
!! AGTAGTCTACTGATTGCTTT+TGG - tig0022346:54322-54341 Msa1399250:CDS 35.0%
!!! AAGATGTTTTAATGGGGTTG+AGG + tig0022346:54426-54445 None:intergenic 35.0%
!!! GTGGTGAAGATGTTTTAATG+GGG + tig0022346:54432-54451 None:intergenic 35.0%
!! CTGTGGTGAAGATGTTTTAA+TGG + tig0022346:54434-54453 None:intergenic 35.0%
CATTAAAACATCTTCACCAC+AGG - tig0022346:54432-54451 Msa1399250:CDS 35.0%
ATCATCAAAACTGAATCCAC+TGG + tig0022346:54479-54498 None:intergenic 35.0%
AATTGCTTGAGCTGAAAAGT+GGG + tig0022346:54516-54535 None:intergenic 35.0%
ATAGTGTATCTTTACCTGCT+CGG - tig0022346:54608-54627 Msa1399250:CDS 35.0%
!! TTTTCCTGCTTTTGATGACT+CGG - tig0022346:54690-54709 Msa1399250:intron 35.0%
CTTTCTGATGAAGTCCTAAA+AGG + tig0022346:54733-54752 None:intergenic 35.0%
GAAAGTCAAACTCCTAGAAA+AGG - tig0022346:54748-54767 Msa1399250:intron 35.0%
!! CATGTGTTATTTCTGTCTTC+AGG - tig0022346:54818-54837 Msa1399250:intron 35.0%
CAAAGAAAAACAGAGGGATA+TGG + tig0022346:54939-54958 None:intergenic 35.0%
!! CATATCCCTCTGTTTTTCTT+TGG - tig0022346:54937-54956 Msa1399250:CDS 35.0%
! TACTTTTAACGGAGACTCTA+TGG + tig0022346:55062-55081 None:intergenic 35.0%
AAGGGAAAATAGAACAGGAG+TGG - tig0022346:44685-44704 Msa1399250:three_prime_UTR 40.0%
GGCGATCAATCCAATTCAAT+TGG - tig0022346:44743-44762 Msa1399250:three_prime_UTR 40.0%
!!! AAGGACTTTTTTGGGCAAAC+CGG + tig0022346:44940-44959 None:intergenic 40.0%
!!! ACCTGAGCAAGGACTTTTTT+GGG + tig0022346:44948-44967 None:intergenic 40.0%
TCGCAAATCCAATCCAGATT+TGG - tig0022346:45119-45138 Msa1399250:CDS 40.0%
CGCAAATCCAATCCAGATTT+GGG - tig0022346:45120-45139 Msa1399250:CDS 40.0%
GCAAATTCCCAAATCTGGAT+TGG + tig0022346:45130-45149 None:intergenic 40.0%
ACAAATCAGAGTGGTTTCCT+AGG - tig0022346:45154-45173 Msa1399250:CDS 40.0%
!! AAGATTTGGTGCAGTGGATT+GGG + tig0022346:45329-45348 None:intergenic 40.0%
!!! GTTGGCTGAGAGTTTTGATT+TGG + tig0022346:45370-45389 None:intergenic 40.0%
! TTTTGCAGAGGCCTTACTAA+TGG + tig0022346:45394-45413 None:intergenic 40.0%
GCAGATGTTGTAATTGCAAC+GGG + tig0022346:45541-45560 None:intergenic 40.0%
AGTAAGCCATCTGATACTTC+TGG - tig0022346:45598-45617 Msa1399250:intron 40.0%
!! GCTTCTGATTCATTTTTCGG+AGG - tig0022346:45634-45653 Msa1399250:intron 40.0%
ATGGCAGATGAAAATCCTTG+TGG + tig0022346:45706-45725 None:intergenic 40.0%
ACAGAATCCTGCAATCTAAC+TGG + tig0022346:45904-45923 None:intergenic 40.0%
ACATCAGTCTGAGTCATTCT+TGG + tig0022346:45952-45971 None:intergenic 40.0%
GAAGTAGACAGAGATAGAGA+TGG - tig0022346:45997-46016 Msa1399250:intron 40.0%
GATAGAGATGGGAAAATCAC+CGG - tig0022346:46009-46028 Msa1399250:intron 40.0%
ATAGAGATGGGAAAATCACC+GGG - tig0022346:46010-46029 Msa1399250:intron 40.0%
! CGAGGAACTTGTTTCTTAGT+TGG - tig0022346:46040-46059 Msa1399250:intron 40.0%
CTTAGTTGGCAATTACCAAG+AGG - tig0022346:46054-46073 Msa1399250:intron 40.0%
CCTGATCCAAACAAATGGAA+AGG + tig0022346:46094-46113 None:intergenic 40.0%
CCTTTCCATTTGTTTGGATC+AGG - tig0022346:46091-46110 Msa1399250:intron 40.0%
AATTACAGCCAGAACACTAG+AGG + tig0022346:46143-46162 None:intergenic 40.0%
!!! TTTTCCAGAGGTTTTGAAGC+AGG - tig0022346:46214-46233 Msa1399250:intron 40.0%
TTGGATTGCACTGTACCTAA+TGG - tig0022346:46289-46308 Msa1399250:intron 40.0%
! TGACTGATTTCCCCAAGTTA+CGG + tig0022346:46414-46433 None:intergenic 40.0%
! GGGGTATTATGGAAGCTATT+TGG - tig0022346:46465-46484 Msa1399250:intron 40.0%
! CTTCTCCAAGACTGGAATTT+TGG + tig0022346:46658-46677 None:intergenic 40.0%
AGCAACAGAAGCTGATAAGA+AGG - tig0022346:46737-46756 Msa1399250:CDS 40.0%
ACATTATGTTGTGCCTTAGG+AGG - tig0022346:46787-46806 Msa1399250:CDS 40.0%
! TTGTGCCTTAGGAGGTTTTA+GGG - tig0022346:46795-46814 Msa1399250:CDS 40.0%
!!! AGGAGGTTTTAGGGAATAAG+TGG - tig0022346:46804-46823 Msa1399250:intron 40.0%
AAATCCAGCAGCTATGTTAG+CGG + tig0022346:46958-46977 None:intergenic 40.0%
ATATTTGGCAGTCAGCCAAT+AGG + tig0022346:47040-47059 None:intergenic 40.0%
GGAGACAGATTGTTTACCAT+TGG - tig0022346:47408-47427 Msa1399250:intron 40.0%
CAGAAACCTAACAAGCAGAT+GGG + tig0022346:47617-47636 None:intergenic 40.0%
ACAGAAACCTAACAAGCAGA+TGG + tig0022346:47618-47637 None:intergenic 40.0%
GTAAAAATAGGCTCAGGGAA+AGG - tig0022346:47666-47685 Msa1399250:intron 40.0%
! TATACCCTTCGTTCAGCTTT+TGG - tig0022346:47719-47738 Msa1399250:intron 40.0%
TCTAGATACCTAGGGACTAT+TGG - tig0022346:47749-47768 Msa1399250:intron 40.0%
AGACATATGCAGAGCATGAA+AGG + tig0022346:47893-47912 None:intergenic 40.0%
CAATCGTCTTAACGAGATCA+TGG - tig0022346:48016-48035 Msa1399250:intron 40.0%
GTCTTAACGAGATCATGGAA+AGG - tig0022346:48021-48040 Msa1399250:intron 40.0%
TTTCTTGCACCTGTATGTCA+CGG + tig0022346:48235-48254 None:intergenic 40.0%
ATACCAAGGGATTGTCAAGT+TGG - tig0022346:48364-48383 Msa1399250:intron 40.0%
AATGAACGGTGCAAGAAGTA+TGG - tig0022346:48553-48572 Msa1399250:intron 40.0%
! AAGGCTTGGTAACACTTGAA+AGG + tig0022346:48678-48697 None:intergenic 40.0%
CTTTGTGGCACAATTCTGTA+TGG - tig0022346:48907-48926 Msa1399250:CDS 40.0%
TCACATGCTAGGTTCATTGT+TGG - tig0022346:49310-49329 Msa1399250:intron 40.0%
TATGCAAATTGTGTGGCATC+TGG - tig0022346:49641-49660 Msa1399250:intron 40.0%
GTTATGAAACCACGTTGACA+TGG - tig0022346:49692-49711 Msa1399250:intron 40.0%
! CATTTTATCTGGGGGATTAG+TGG - tig0022346:49731-49750 Msa1399250:intron 40.0%
!! GTAGAAAAGATGGTGGAAAC+TGG - tig0022346:49791-49810 Msa1399250:intron 40.0%
GACCTGTAGATGTTGTAGTA+AGG - tig0022346:49843-49862 Msa1399250:intron 40.0%
CTCCTTACTACAACATCTAC+AGG + tig0022346:49848-49867 None:intergenic 40.0%
AGTAAGGAGAGTAGATCAGA+TGG - tig0022346:49859-49878 Msa1399250:intron 40.0%
GAGGATAGTCAGATCACTAT+AGG - tig0022346:49881-49900 Msa1399250:intron 40.0%
!!! ATTTTTGGTTTCAGGCAGCA+CGG - tig0022346:50068-50087 Msa1399250:intron 40.0%
CGCATTCAATCCTAATAGAG+AGG + tig0022346:50206-50225 None:intergenic 40.0%
TAAGTAGAACCTGAAGAAGC+TGG - tig0022346:50480-50499 Msa1399250:intron 40.0%
CAGAGTAAGTGAGAAAAGCT+AGG + tig0022346:50541-50560 None:intergenic 40.0%
TGGATAGAGACCAGAAAATG+AGG + tig0022346:50810-50829 None:intergenic 40.0%
!!! GCCTTTGGTTGCTTTTGTTT+TGG + tig0022346:50959-50978 None:intergenic 40.0%
! TTAGGCGACGCTACAAATTT+TGG + tig0022346:51013-51032 None:intergenic 40.0%
ACCTCAGACTACAAATGAAC+AGG - tig0022346:51054-51073 Msa1399250:intron 40.0%
CCTCAGACTACAAATGAACA+GGG - tig0022346:51055-51074 Msa1399250:intron 40.0%
ACTACAAATGAACAGGGAGT+AGG - tig0022346:51061-51080 Msa1399250:intron 40.0%
!! CTGCTTGCAAATGGACTATT+AGG + tig0022346:51136-51155 None:intergenic 40.0%
CCATTTGCAAGCAGTACTAT+CGG - tig0022346:51142-51161 Msa1399250:intron 40.0%
GAATCAACAAAGTCCCTATG+CGG + tig0022346:51172-51191 None:intergenic 40.0%
TCTGACATTCGAAAGACTTC+CGG - tig0022346:51190-51209 Msa1399250:intron 40.0%
TTGCGCATCATCTTGATTAC+GGG + tig0022346:51230-51249 None:intergenic 40.0%
CTTGCGCATCATCTTGATTA+CGG + tig0022346:51231-51250 None:intergenic 40.0%
!!! CTGTGCCTTTTTCAAGTTTG+TGG - tig0022346:51348-51367 Msa1399250:intron 40.0%
ATGCTTAACCATTGCCCTTA+GGG + tig0022346:51435-51454 None:intergenic 40.0%
!! CCCCTGTGATTTTGATCAAT+AGG - tig0022346:51661-51680 Msa1399250:CDS 40.0%
!! TACTATCCTCCACTTTTGCT+TGG - tig0022346:52067-52086 Msa1399250:intron 40.0%
!! ACTATCCTCCACTTTTGCTT+GGG - tig0022346:52068-52087 Msa1399250:intron 40.0%
!!! GTTTTTTGCCCAAGCAAAAG+TGG + tig0022346:52079-52098 None:intergenic 40.0%
!! AGATGGGTTTTCTGTCAAGT+TGG + tig0022346:52110-52129 None:intergenic 40.0%
GATGCGAACCTTCTCATATT+TGG - tig0022346:52152-52171 Msa1399250:intron 40.0%
AAGGTAGAATGATTGTGTGG+AGG + tig0022346:52200-52219 None:intergenic 40.0%
AAGAAATTTCCACATCTGCG+AGG - tig0022346:52473-52492 Msa1399250:intron 40.0%
AGAAATTTCCACATCTGCGA+GGG - tig0022346:52474-52493 Msa1399250:intron 40.0%
GATATGCAGCATACCATTCA+TGG - tig0022346:52523-52542 Msa1399250:intron 40.0%
! CATTTAGCATTGAAGTGGCA+AGG + tig0022346:52646-52665 None:intergenic 40.0%
TTCCCAACTGTAGAATGGAA+AGG - tig0022346:52853-52872 Msa1399250:intron 40.0%
! TATATTGGTAACCGTGGACA+CGG + tig0022346:52914-52933 None:intergenic 40.0%
TCTTGCATATGCAGTGATCA+TGG - tig0022346:53005-53024 Msa1399250:intron 40.0%
AGATGTGCCCTTCAAAAGAA+AGG + tig0022346:53193-53212 None:intergenic 40.0%
CTTGTCAAAACCAATGATGG+TGG - tig0022346:53240-53259 Msa1399250:CDS 40.0%
TTGTGTGCTAGACTATGATC+AGG + tig0022346:53338-53357 None:intergenic 40.0%
CATAATATATGCAAGGTCCG+AGG - tig0022346:53694-53713 Msa1399250:intron 40.0%
AAAAAAAGGTGGTTGGGATG+AGG - tig0022346:53740-53759 Msa1399250:intron 40.0%
! TGTCTTTTTGCCCATAGCTA+TGG + tig0022346:53794-53813 None:intergenic 40.0%
ATGTTGGACTGATGCTTACT+AGG - tig0022346:53814-53833 Msa1399250:CDS 40.0%
!! ACGATTCTGACAGTTCTGAA+TGG + tig0022346:53849-53868 None:intergenic 40.0%
ATTCAGAACTGTCAGAATCG+TGG - tig0022346:53848-53867 Msa1399250:CDS 40.0%
ATTCAATTAGACTCACGGGT+TGG - tig0022346:53973-53992 Msa1399250:CDS 40.0%
!!! AACTGCACCACTGTCATTTT+AGG + tig0022346:54038-54057 None:intergenic 40.0%
TGGGATATCAGCTGTATTTG+TGG + tig0022346:54097-54116 None:intergenic 40.0%
! TTTGGAGATTAGCTCGTGTT+GGG + tig0022346:54116-54135 None:intergenic 40.0%
ACAACATCAATCACCTCCTT+TGG + tig0022346:54134-54153 None:intergenic 40.0%
GATCTCTTGAACCTTGCAAA+AGG + tig0022346:54171-54190 None:intergenic 40.0%
!! TTTCTTTAGTTCTGGAGACC+TGG - tig0022346:54399-54418 Msa1399250:CDS 40.0%
!! TTCTTTAGTTCTGGAGACCT+GGG - tig0022346:54400-54419 Msa1399250:CDS 40.0%
ATTGCTTGAGCTGAAAAGTG+GGG + tig0022346:54515-54534 None:intergenic 40.0%
GAATTGCTTGAGCTGAAAAG+TGG + tig0022346:54517-54536 None:intergenic 40.0%
TAGTGTATCTTTACCTGCTC+GGG - tig0022346:54609-54628 Msa1399250:CDS 40.0%
ACAGAATCAAATCGTACTGG+TGG + tig0022346:54643-54662 None:intergenic 40.0%
! TCAGGTGGGGATACTTTTAA+CGG + tig0022346:55073-55092 None:intergenic 40.0%
GCATCGAACAGATCCACATT+AGG + tig0022346:44843-44862 None:intergenic 45.0%
!! TTATTTCCGTCGTGCCGATT+TGG - tig0022346:44863-44882 Msa1399250:three_prime_UTR 45.0%
!!! GACCTGAGCAAGGACTTTTT+TGG + tig0022346:44949-44968 None:intergenic 45.0%
GCAAAATTGATCTGAGGAGC+AGG + tig0022346:45292-45311 None:intergenic 45.0%
GTGGCAGCAAAATTGATCTG+AGG + tig0022346:45298-45317 None:intergenic 45.0%
!! AGATTTGGTGCAGTGGATTG+GGG + tig0022346:45328-45347 None:intergenic 45.0%
!! CAAGATTTGGTGCAGTGGAT+TGG + tig0022346:45330-45349 None:intergenic 45.0%
CAATCCACTGCACCAAATCT+TGG - tig0022346:45328-45347 Msa1399250:CDS 45.0%
TGCACCAAATCTTGGACCAA+GGG - tig0022346:45336-45355 Msa1399250:CDS 45.0%
CTCAGCCAACTCCATTAGTA+AGG - tig0022346:45380-45399 Msa1399250:CDS 45.0%
AGAGGCCTTACTAATGGAGT+TGG + tig0022346:45388-45407 None:intergenic 45.0%
! CTGGCAGACATATTTTGCAG+AGG + tig0022346:45406-45425 None:intergenic 45.0%
GGCTTACTAGCAGATGAAGT+AGG + tig0022346:45586-45605 None:intergenic 45.0%
!! CCATTGCCAGAAGTATCAGA+TGG + tig0022346:45607-45626 None:intergenic 45.0%
CCATCTGATACTTCTGGCAA+TGG - tig0022346:45604-45623 Msa1399250:intron 45.0%
!!! GTTTTGGTTAGGCTGAGATG+AGG + tig0022346:45677-45696 None:intergenic 45.0%
TCTGCCATTGTTCCTGTATC+TGG - tig0022346:45718-45737 Msa1399250:intron 45.0%
CCATTGTTCCTGTATCTGGA+GGG - tig0022346:45722-45741 Msa1399250:intron 45.0%
TGGTGGTCCTAATAGAACTC+TGG + tig0022346:45750-45769 None:intergenic 45.0%
TGAGGTCTGCAAAGAATCAG+GGG + tig0022346:45773-45792 None:intergenic 45.0%
GTGAGGTCTGCAAAGAATCA+GGG + tig0022346:45774-45793 None:intergenic 45.0%
AGTGAGGTCTGCAAAGAATC+AGG + tig0022346:45775-45794 None:intergenic 45.0%
AACAGAGTGAGTAGCAAGTG+AGG + tig0022346:45791-45810 None:intergenic 45.0%
CCAGATGAAGTGGGCATATT+AGG + tig0022346:45877-45896 None:intergenic 45.0%
CCTAATATGCCCACTTCATC+TGG - tig0022346:45874-45893 Msa1399250:intron 45.0%
ACTGGAAGTCCAGATGAAGT+GGG + tig0022346:45886-45905 None:intergenic 45.0%
AACTGGAAGTCCAGATGAAG+TGG + tig0022346:45887-45906 None:intergenic 45.0%
TGGACTTCCAGTTAGATTGC+AGG - tig0022346:45894-45913 Msa1399250:intron 45.0%
AGATTGCAGGATTCTGTGTC+AGG - tig0022346:45907-45926 Msa1399250:intron 45.0%
TCATTCTTGGCCATGGAGAT+TGG + tig0022346:45939-45958 None:intergenic 45.0%
TAGAGATGGGAAAATCACCG+GGG - tig0022346:46011-46030 Msa1399250:intron 45.0%
!!! AGAGGTTTTGAAGCAGGTCT+GGG - tig0022346:46220-46239 Msa1399250:intron 45.0%
! TGCTCTCTCTCAGAGAGTTT+TGG - tig0022346:46270-46289 Msa1399250:intron 45.0%
! GACTGATTTCCCCAAGTTAC+GGG + tig0022346:46413-46432 None:intergenic 45.0%
GTAACTTGGGGAAATCAGTC+AGG - tig0022346:46413-46432 Msa1399250:intron 45.0%
CAACAACATCAAGGGATGAC+TGG - tig0022346:46534-46553 Msa1399250:intron 45.0%
GAGTTCCTTCATCAGATGGA+GGG + tig0022346:46617-46636 None:intergenic 45.0%
TGAGTTCCTTCATCAGATGG+AGG + tig0022346:46618-46637 None:intergenic 45.0%
ATGAGATGCTTCTCCAAGAC+TGG + tig0022346:46666-46685 None:intergenic 45.0%
! GTTGTGCCTTAGGAGGTTTT+AGG - tig0022346:46794-46813 Msa1399250:CDS 45.0%
AGGGAATAAGTGGCCTTTGT+TGG - tig0022346:46814-46833 Msa1399250:intron 45.0%
GGGAATAAGTGGCCTTTGTT+GGG - tig0022346:46815-46834 Msa1399250:intron 45.0%
GGAATAAGTGGCCTTTGTTG+GGG - tig0022346:46816-46835 Msa1399250:intron 45.0%
ATTACGGTGATTGTGTCAGC+GGG + tig0022346:46851-46870 None:intergenic 45.0%
GATTACGGTGATTGTGTCAG+CGG + tig0022346:46852-46871 None:intergenic 45.0%
! TTTTCCGCTAACATAGCTGC+TGG - tig0022346:46951-46970 Msa1399250:intron 45.0%
TAGACTCCCATCTGCTTGTT+AGG - tig0022346:47608-47627 Msa1399250:intron 45.0%
GCTGCTTCTCTAGATACCTA+GGG - tig0022346:47741-47760 Msa1399250:intron 45.0%
TGTTCTATTGTGAACCCAGG+CGG - tig0022346:47802-47821 Msa1399250:intron 45.0%
!! TACACAAAAGAGTACCGCCT+GGG + tig0022346:47819-47838 None:intergenic 45.0%
!! ATACACAAAAGAGTACCGCC+TGG + tig0022346:47820-47839 None:intergenic 45.0%
!!! TCTGGTTTTCTGCCTGCAAA+AGG - tig0022346:47971-47990 Msa1399250:intron 45.0%
CGTTAAGACGATTGTCGCAT+CGG + tig0022346:48010-48029 None:intergenic 45.0%
! ATCATCCAAGTTGACAACGG+AGG - tig0022346:48199-48218 Msa1399250:intron 45.0%
GTTCCAACTTGACAATCCCT+TGG + tig0022346:48370-48389 None:intergenic 45.0%
!! AGGGATTGTCAAGTTGGAAC+AGG - tig0022346:48370-48389 Msa1399250:intron 45.0%
!! TCATGATGGATGTGCAGAAC+AGG + tig0022346:48438-48457 None:intergenic 45.0%
CAGAATTGATGCGATCAGCA+CGG + tig0022346:48507-48526 None:intergenic 45.0%
ACATTAGTGGAGCTACCCTT+TGG - tig0022346:48595-48614 Msa1399250:CDS 45.0%
CCGGTAGTTCAGCAATTGAA+GGG + tig0022346:48770-48789 None:intergenic 45.0%
CCCTTCAATTGCTGAACTAC+CGG - tig0022346:48767-48786 Msa1399250:CDS 45.0%
ACCGGTAGTTCAGCAATTGA+AGG + tig0022346:48771-48790 None:intergenic 45.0%
! AAATGCCATGCCACTTGATC+AGG + tig0022346:48844-48863 None:intergenic 45.0%
! TGCTGATTGGGATGAGGATT+GGG - tig0022346:49537-49556 Msa1399250:intron 45.0%
AAACTGGGCTTAGGTGGTTT+GGG - tig0022346:49807-49826 Msa1399250:intron 45.0%
AAGGAGAGTAGATCAGATGG+AGG - tig0022346:49862-49881 Msa1399250:intron 45.0%
TCTGTGTGTGTGTGTGTGAT+CGG + tig0022346:50377-50396 None:intergenic 45.0%
CAGAACTACAGATGCAAGAG+AGG + tig0022346:50576-50595 None:intergenic 45.0%
!!! CTTTTGTTTTGGAGGCGCTA+TGG + tig0022346:50948-50967 None:intergenic 45.0%
CCCTGTTCATTTGTAGTCTG+AGG + tig0022346:51058-51077 None:intergenic 45.0%
AATGAACAGGGAGTAGGCAA+CGG - tig0022346:51067-51086 Msa1399250:intron 45.0%
CCGATAGTACTGCTTGCAAA+TGG + tig0022346:51145-51164 None:intergenic 45.0%
TACTATCGGAAGTCCGCATA+GGG - tig0022346:51156-51175 Msa1399250:intron 45.0%
TGCGCATCATCTTGATTACG+GGG + tig0022346:51229-51248 None:intergenic 45.0%
ATGATGCGCAAGAAACCCAA+AGG - tig0022346:51239-51258 Msa1399250:CDS 45.0%
AATGCTAACCAGTGCCCTAA+GGG - tig0022346:51418-51437 Msa1399250:intron 45.0%
GATGCTTAACCATTGCCCTT+AGG + tig0022346:51436-51455 None:intergenic 45.0%
TGCCCTCAAGGCAATGATTA+AGG + tig0022346:51549-51568 None:intergenic 45.0%
ATCAGAAAAATGGGGCAGCA+AGG + tig0022346:51700-51719 None:intergenic 45.0%
GAGACAAAAGCCCTTTGAGT+TGG + tig0022346:51765-51784 None:intergenic 45.0%
TAGAGACCTGCTAACAGCTT+AGG - tig0022346:51811-51830 Msa1399250:CDS 45.0%
GAATAGCCTAAGCTGTTAGC+AGG + tig0022346:51820-51839 None:intergenic 45.0%
! TTTTGCCCAAGCAAAAGTGG+AGG + tig0022346:52076-52095 None:intergenic 45.0%
GCTTCAGCCCAAATATGAGA+AGG + tig0022346:52163-52182 None:intergenic 45.0%
AGGGGGTGATTTAGTCAACA+AGG + tig0022346:52313-52332 None:intergenic 45.0%
ACCACTCAGTGAAAGTGAGA+GGG + tig0022346:52332-52351 None:intergenic 45.0%
AACCACTCAGTGAAAGTGAG+AGG + tig0022346:52333-52352 None:intergenic 45.0%
! TTAGCATTGAAGTGGCAAGG+TGG + tig0022346:52643-52662 None:intergenic 45.0%
! GACGCATATATTGGTAACCG+TGG + tig0022346:52920-52939 None:intergenic 45.0%
TGCATATGCAGTGATCATGG+TGG - tig0022346:53008-53027 Msa1399250:intron 45.0%
GTGTCAAAGGTTCCCCAATT+AGG + tig0022346:53074-53093 None:intergenic 45.0%
CAATGCCAGTAGCATCACTA+AGG - tig0022346:53124-53143 Msa1399250:CDS 45.0%
TACCTCCTTAGTGATGCTAC+TGG + tig0022346:53132-53151 None:intergenic 45.0%
TACCAACTGAGCTAAGCTCA+CGG + tig0022346:53665-53684 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+AGG - tig0022346:53665-53684 Msa1399250:intron 45.0%
GACTGATGCTTACTAGGAAC+AGG - tig0022346:53820-53839 Msa1399250:CDS 45.0%
! CTTTGGAGATTAGCTCGTGT+TGG + tig0022346:54117-54136 None:intergenic 45.0%
CAACACGAGCTAATCTCCAA+AGG - tig0022346:54115-54134 Msa1399250:CDS 45.0%
! GAGTCTCAACTCCTTTTGCA+AGG - tig0022346:54157-54176 Msa1399250:CDS 45.0%
TTACAGGAGAGAGAGCTTGA+TGG - tig0022346:54361-54380 Msa1399250:CDS 45.0%
!! AACTGAATCCACTGGTCTTC+TGG + tig0022346:54471-54490 None:intergenic 45.0%
CGGACAGAATCAAATCGTAC+TGG + tig0022346:54646-54665 None:intergenic 45.0%
!! AGCAGTGCGGATTTTGATCA+TGG - tig0022346:54667-54686 Msa1399250:CDS 45.0%
! TTTGATGACTCGGATCCCTT+TGG - tig0022346:54700-54719 Msa1399250:intron 45.0%
ACTCCACCAGAGGCAAATAT+CGG + tig0022346:54848-54867 None:intergenic 45.0%
GAGTTGTGCATCTTTCTGTG+TGG - tig0022346:54868-54887 Msa1399250:intron 45.0%
CAGAGGGATATGGAATACAC+AGG + tig0022346:54929-54948 None:intergenic 45.0%
CCACGCCAAAGAAAAACAGA+GGG + tig0022346:54945-54964 None:intergenic 45.0%
!! CCTCTGTTTTTCTTTGGCGT+GGG - tig0022346:54943-54962 Msa1399250:CDS 45.0%
!! CTCTGTTTTTCTTTGGCGTG+GGG - tig0022346:54944-54963 Msa1399250:CDS 45.0%
AGAAATCAAGTGGGATCGCT+GGG + tig0022346:54986-55005 None:intergenic 45.0%
AAGAAATCAAGTGGGATCGC+TGG + tig0022346:54987-55006 None:intergenic 45.0%
!! TATATATATATATATTGAAT+GGG + tig0022346:49445-49464 None:intergenic 5.0%
!! ATATATATATATATATTGAA+TGG + tig0022346:49446-49465 None:intergenic 5.0%
GAAGCCGTCTCTTTCTTCCA+AGG - tig0022346:44912-44931 Msa1399250:three_prime_UTR 50.0%
GGAGCCTTGGAAGAAAGAGA+CGG + tig0022346:44919-44938 None:intergenic 50.0%
GTCTCTTTCTTCCAAGGCTC+CGG - tig0022346:44918-44937 Msa1399250:three_prime_UTR 50.0%
GCCCAAAAAAGTCCTTGCTC+AGG - tig0022346:44944-44963 Msa1399250:three_prime_UTR 50.0%
TGTAGAACTCTGCACGACCT+AGG + tig0022346:45174-45193 None:intergenic 50.0%
GATCTGAGGAGCAGGAATCT+TGG + tig0022346:45284-45303 None:intergenic 50.0%
!! TGGTCCAAGATTTGGTGCAG+TGG + tig0022346:45335-45354 None:intergenic 50.0%
CTGCACCAAATCTTGGACCA+AGG - tig0022346:45335-45354 Msa1399250:CDS 50.0%
GCACCAAATCTTGGACCAAG+GGG - tig0022346:45337-45356 Msa1399250:CDS 50.0%
! TGATTTGGAAGAGGTCCCCT+TGG + tig0022346:45355-45374 None:intergenic 50.0%
AAGTCCTTGAGTGGGTAGAC+TGG + tig0022346:45425-45444 None:intergenic 50.0%
TCCTCTCAGCTACCAGTTAG+AGG - tig0022346:45508-45527 Msa1399250:intron 50.0%
TCCTCTAACTGGTAGCTGAG+AGG + tig0022346:45512-45531 None:intergenic 50.0%
!! ACGGGACTAGTTCCTCTAAC+TGG + tig0022346:45523-45542 None:intergenic 50.0%
AGCAGATGAAGTAGGTGCGA+GGG + tig0022346:45578-45597 None:intergenic 50.0%
TAGCAGATGAAGTAGGTGCG+AGG + tig0022346:45579-45598 None:intergenic 50.0%
TTGGTTAGGCTGAGATGAGG+TGG + tig0022346:45674-45693 None:intergenic 50.0%
GCCATTGTTCCTGTATCTGG+AGG - tig0022346:45721-45740 Msa1399250:intron 50.0%
CCCTCCAGATACAGGAACAA+TGG + tig0022346:45725-45744 None:intergenic 50.0%
GAGGGAGCCAGAGTTCTATT+AGG - tig0022346:45740-45759 Msa1399250:intron 50.0%
ACATCTTCAGCAGAACCAGC+CGG - tig0022346:45816-45835 Msa1399250:intron 50.0%
!! TGCTGGTTCTGATTCACTGC+CGG + tig0022346:45838-45857 None:intergenic 50.0%
GAATCAGAACCAGCATGCCT+CGG - tig0022346:45843-45862 Msa1399250:intron 50.0%
GTCTGAGTCATTCTTGGCCA+TGG + tig0022346:45946-45965 None:intergenic 50.0%
CAGACCTGCTTCAAAACCTC+TGG + tig0022346:46221-46240 None:intergenic 50.0%
!!! CAGAGGTTTTGAAGCAGGTC+TGG - tig0022346:46219-46238 Msa1399250:intron 50.0%
TGTACCTAATGGAGCGACAC+AGG - tig0022346:46300-46319 Msa1399250:intron 50.0%
GTACCTAATGGAGCGACACA+GGG - tig0022346:46301-46320 Msa1399250:intron 50.0%
CCAGTAGTCGTGGGTATATC+AGG + tig0022346:46368-46387 None:intergenic 50.0%
CCTGATATACCCACGACTAC+TGG - tig0022346:46365-46384 Msa1399250:intron 50.0%
! ACAGGTTGACCAGTAGTCGT+GGG + tig0022346:46377-46396 None:intergenic 50.0%
ATCTCCACAGTCCCGTAACT+TGG - tig0022346:46399-46418 Msa1399250:intron 50.0%
TCTCCACAGTCCCGTAACTT+GGG - tig0022346:46400-46419 Msa1399250:intron 50.0%
CATCAAGGGATGACTGGATC+TGG - tig0022346:46540-46559 Msa1399250:intron 50.0%
AACTCAACCCTACAGCAGGT+CGG - tig0022346:46571-46590 Msa1399250:intron 50.0%
GGAGGTTCAATCCCCAACAA+AGG + tig0022346:46830-46849 None:intergenic 50.0%
GCAGCCAAAAGCTGAACGAA+GGG + tig0022346:47726-47745 None:intergenic 50.0%
AGCAGCCAAAAGCTGAACGA+AGG + tig0022346:47727-47746 None:intergenic 50.0%
GGCTGCTTCTCTAGATACCT+AGG - tig0022346:47740-47759 Msa1399250:intron 50.0%
! TTCGTAGGCATCGCTCTTCT+GGG + tig0022346:47775-47794 None:intergenic 50.0%
! TTTCGTAGGCATCGCTCTTC+TGG + tig0022346:47776-47795 None:intergenic 50.0%
AGCCACATTCCGTGACATAC+AGG - tig0022346:48223-48242 Msa1399250:intron 50.0%
CACCTGTATGTCACGGAATG+TGG + tig0022346:48228-48247 None:intergenic 50.0%
TGCAAAGCCCACGACATTAG+TGG - tig0022346:48582-48601 Msa1399250:CDS 50.0%
GGTAGCTCCACTAATGTCGT+GGG + tig0022346:48592-48611 None:intergenic 50.0%
AGTTGCCTGATCAAGTGGCA+TGG - tig0022346:48836-48855 Msa1399250:CDS 50.0%
ACTCATGAGACTGGTGAGCA+GGG + tig0022346:49414-49433 None:intergenic 50.0%
AATCCTTTAGGCTGGCAACC+TGG - tig0022346:49499-49518 Msa1399250:intron 50.0%
ATACCAGGTTGCCAGCCTAA+AGG + tig0022346:49505-49524 None:intergenic 50.0%
TGGCAACCTGGTATCCAAGA+AGG - tig0022346:49511-49530 Msa1399250:intron 50.0%
TCCAAGAAGGAGCTGCTGAT+TGG - tig0022346:49524-49543 Msa1399250:intron 50.0%
! CCAAGAAGGAGCTGCTGATT+GGG - tig0022346:49525-49544 Msa1399250:intron 50.0%
! CTGCTGATTGGGATGAGGAT+TGG - tig0022346:49536-49555 Msa1399250:intron 50.0%
ACCACGTTGACATGGACACT+AGG - tig0022346:49700-49719 Msa1399250:intron 50.0%
!! AGATGGTGGAAACTGGGCTT+AGG - tig0022346:49798-49817 Msa1399250:intron 50.0%
GAAACTGGGCTTAGGTGGTT+TGG - tig0022346:49806-49825 Msa1399250:intron 50.0%
TAGAACCTGAAGAAGCTGGC+CGG - tig0022346:50484-50503 Msa1399250:intron 50.0%
ATATACCGGCCAGCTTCTTC+AGG + tig0022346:50492-50511 None:intergenic 50.0%
! TGCAAGAGAGGTGCATACGT+GGG + tig0022346:50564-50583 None:intergenic 50.0%
! ATGCAAGAGAGGTGCATACG+TGG + tig0022346:50565-50584 None:intergenic 50.0%
! GCTTTTGCGTTCACAGCCTT+TGG + tig0022346:50974-50993 None:intergenic 50.0%
GGCTGTGAACGCAAAAGCTT+TGG - tig0022346:50976-50995 Msa1399250:intron 50.0%
GTACTATCGGAAGTCCGCAT+AGG - tig0022346:51155-51174 Msa1399250:intron 50.0%
GCGCAAGAAACCCAAAGGTA+TGG - tig0022346:51244-51263 Msa1399250:CDS 50.0%
GAATGCTAACCAGTGCCCTA+AGG - tig0022346:51417-51436 Msa1399250:intron 50.0%
! AATCATTGCCTTGAGGGCAC+TGG - tig0022346:51550-51569 Msa1399250:intron 50.0%
!! ATCATTGCCTTGAGGGCACT+GGG - tig0022346:51551-51570 Msa1399250:intron 50.0%
AGGTATGCGCACGCATACAT+GGG + tig0022346:52025-52044 None:intergenic 50.0%
AAGGTATGCGCACGCATACA+TGG + tig0022346:52026-52045 None:intergenic 50.0%
CACTCAGTGAAAGTGAGAGG+GGG + tig0022346:52330-52349 None:intergenic 50.0%
CCACTCAGTGAAAGTGAGAG+GGG + tig0022346:52331-52350 None:intergenic 50.0%
CAACTTGAAAGGACGCATGC+AGG - tig0022346:52357-52376 Msa1399250:intron 50.0%
TTGGTTCATGTCCGTGTCCA+CGG - tig0022346:52900-52919 Msa1399250:intron 50.0%
TGCCAGTAGCATCACTAAGG+AGG - tig0022346:53127-53146 Msa1399250:CDS 50.0%
GCAAGCTCTTGCGTGTAAAG+TGG - tig0022346:53153-53172 Msa1399250:CDS 50.0%
! GGCGACTTTTCCTAGATCAC+TGG + tig0022346:53373-53392 None:intergenic 50.0%
ACCAACTGAGCTAAGCTCAC+GGG + tig0022346:53664-53683 None:intergenic 50.0%
TTGGGATGAGGCACATGTAG+AGG - tig0022346:53752-53771 Msa1399250:intron 50.0%
!! CAATTAGACTCACGGGTTGG+AGG - tig0022346:53976-53995 Msa1399250:CDS 50.0%
CACGAGCTAATCTCCAAAGG+AGG - tig0022346:54118-54137 Msa1399250:CDS 50.0%
! TTTTAATGGGGTTGAGGCCC+AGG + tig0022346:54420-54439 None:intergenic 50.0%
GATCTCTTCCAGAAGACCAG+TGG - tig0022346:54460-54479 Msa1399250:CDS 50.0%
AACCAGTCCTTAGGCCTTTG+CGG + tig0022346:54541-54560 None:intergenic 50.0%
! GCGTTTTCCAACCAGTCCTT+AGG + tig0022346:54550-54569 None:intergenic 50.0%
GATCAAAATCCGCACTGCTG+CGG + tig0022346:54666-54685 None:intergenic 50.0%
GGATCCGAGTCATCAAAAGC+AGG + tig0022346:54697-54716 None:intergenic 50.0%
CTAAAAGGCCCAGAGCCAAA+GGG + tig0022346:54718-54737 None:intergenic 50.0%
GTTCCGATATTTGCCTCTGG+TGG - tig0022346:54842-54861 Msa1399250:intron 50.0%
!! CCCTCTGTTTTTCTTTGGCG+TGG - tig0022346:54942-54961 Msa1399250:CDS 50.0%
CCCACGCCAAAGAAAAACAG+AGG + tig0022346:54946-54965 None:intergenic 50.0%
! TTTTTCTTTGGCGTGGGGCT+TGG - tig0022346:54949-54968 Msa1399250:CDS 50.0%
! TTTTCTTTGGCGTGGGGCTT+GGG - tig0022346:54950-54969 Msa1399250:CDS 50.0%
GTATCCCCACCTGATGAGAT+CGG - tig0022346:55079-55098 Msa1399250:five_prime_UTR 50.0%
TATCCCCACCTGATGAGATC+GGG - tig0022346:55080-55099 Msa1399250:five_prime_UTR 50.0%
TCAATACCCCCGATCTCATC+AGG + tig0022346:55091-55110 None:intergenic 50.0%
CACGATCCAAATCGGCACGA+CGG + tig0022346:44872-44891 None:intergenic 55.0%
!! CGTGCCGATTTGGATCGTGA+CGG - tig0022346:44873-44892 Msa1399250:three_prime_UTR 55.0%
ACGGCCGTCACGATCCAAAT+CGG + tig0022346:44880-44899 None:intergenic 55.0%
! TTTTGGGCAAACCGGAGCCT+TGG + tig0022346:44932-44951 None:intergenic 55.0%
GCGCGAACTCACTCCTGAAA+TGG - tig0022346:45228-45247 Msa1399250:CDS 55.0%
GCAGGAATCTTGGATGCAGC+TGG + tig0022346:45274-45293 None:intergenic 55.0%
!! AGTGGATTGGGGTGTGACAG+TGG + tig0022346:45317-45336 None:intergenic 55.0%
GGTCCCCTTGGTCCAAGATT+TGG + tig0022346:45343-45362 None:intergenic 55.0%
TCTGCCAGTCTACCCACTCA+AGG - tig0022346:45418-45437 Msa1399250:CDS 55.0%
CTACCCACTCAAGGACTTCC+TGG - tig0022346:45427-45446 Msa1399250:CDS 55.0%
GGTCCAGGAAGTCCTTGAGT+GGG + tig0022346:45433-45452 None:intergenic 55.0%
AGGTCCAGGAAGTCCTTGAG+TGG + tig0022346:45434-45453 None:intergenic 55.0%
CATGTTGCCATACCCAGGGA+AGG + tig0022346:45476-45495 None:intergenic 55.0%
GAGGCATGTTGCCATACCCA+GGG + tig0022346:45480-45499 None:intergenic 55.0%
GCAGATGAAGTAGGTGCGAG+GGG + tig0022346:45577-45596 None:intergenic 55.0%
CTGCAAAGAATCAGGGGTGG+TGG + tig0022346:45767-45786 None:intergenic 55.0%
GGTCTGCAAAGAATCAGGGG+TGG + tig0022346:45770-45789 None:intergenic 55.0%
!! GGCTGGTTCTGCTGAAGATG+TGG + tig0022346:45817-45836 None:intergenic 55.0%
CATATTAGGCGCCTGAACCG+AGG + tig0022346:45863-45882 None:intergenic 55.0%
CAGGTCAGCACCAATCTCCA+TGG - tig0022346:45926-45945 Msa1399250:intron 55.0%
TGGGAAAATCACCGGGGAAC+AGG - tig0022346:46017-46036 Msa1399250:intron 55.0%
CTAATGGAGCGACACAGGGA+GGG - tig0022346:46305-46324 Msa1399250:intron 55.0%
! GACAGGTTGACCAGTAGTCG+TGG + tig0022346:46378-46397 None:intergenic 55.0%
ACGGGACTGTGGAGATTGAC+AGG + tig0022346:46395-46414 None:intergenic 55.0%
CTCCACAGTCCCGTAACTTG+GGG - tig0022346:46401-46420 Msa1399250:intron 55.0%
TTCCCCAAGTTACGGGACTG+TGG + tig0022346:46406-46425 None:intergenic 55.0%
CGACAACTCAACCCTACAGC+AGG - tig0022346:46567-46586 Msa1399250:intron 55.0%
GCTGTCCCTCCATCTGATGA+AGG - tig0022346:46609-46628 Msa1399250:intron 55.0%
CTTCTGGGCCAATAGTCCCT+AGG + tig0022346:47760-47779 None:intergenic 55.0%
GGCTTCCTCCGTTGTCAACT+TGG + tig0022346:48207-48226 None:intergenic 55.0%
GGGTAGCTCCACTAATGTCG+TGG + tig0022346:48593-48612 None:intergenic 55.0%
GACTCATGAGACTGGTGAGC+AGG + tig0022346:49415-49434 None:intergenic 55.0%
GGGCAGATGACTCATGAGAC+TGG + tig0022346:49423-49442 None:intergenic 55.0%
GCAGCTCCTTCTTGGATACC+AGG + tig0022346:49520-49539 None:intergenic 55.0%
CCCAATCAGCAGCTCCTTCT+TGG + tig0022346:49528-49547 None:intergenic 55.0%
! AGGAGCTGCTGATTGGGATG+AGG - tig0022346:49531-49550 Msa1399250:intron 55.0%
GCCTAGTGTCCATGTCAACG+TGG + tig0022346:49704-49723 None:intergenic 55.0%
TGGTGGAAACTGGGCTTAGG+TGG - tig0022346:49801-49820 Msa1399250:intron 55.0%
ACGGGGTGAGCTATCTTCAC+CGG + tig0022346:51212-51231 None:intergenic 55.0%
AACCAGTGCCCTAAGGGCAA+TGG - tig0022346:51424-51443 Msa1399250:CDS 55.0%
AACCATTGCCCTTAGGGCAC+TGG + tig0022346:51429-51448 None:intergenic 55.0%
TTTGCTACCCAGTGCCCTCA+AGG + tig0022346:51561-51580 None:intergenic 55.0%
CCCCTCTCACTTTCACTGAG+TGG - tig0022346:52328-52347 Msa1399250:intron 55.0%
ATTTCCACATCTGCGAGGGC+AGG - tig0022346:52478-52497 Msa1399250:intron 55.0%
CCAACTGAGCTAAGCTCACG+GGG + tig0022346:53663-53682 None:intergenic 55.0%
GAGAGAGAGCTTGATGGAGC+TGG - tig0022346:54367-54386 Msa1399250:CDS 55.0%
TGGAAGAGATCAGCAGCCTG+TGG + tig0022346:54451-54470 None:intergenic 55.0%
! GAGCTGAAAAGTGGGGTGCT+TGG + tig0022346:54508-54527 None:intergenic 55.0%
GCTCAAGCAATTCCCCGCAA+AGG - tig0022346:54524-54543 Msa1399250:CDS 55.0%
CAATTCCCCGCAAAGGCCTA+AGG - tig0022346:54531-54550 Msa1399250:CDS 55.0%
ACCAGTCCTTAGGCCTTTGC+GGG + tig0022346:54540-54559 None:intergenic 55.0%
! GCAAAGGCCTAAGGACTGGT+TGG - tig0022346:54540-54559 Msa1399250:CDS 55.0%
TGATTCTGTCCGCAGCAGTG+CGG - tig0022346:54654-54673 Msa1399250:CDS 55.0%
!! ACTCGGATCCCTTTGGCTCT+GGG - tig0022346:54707-54726 Msa1399250:intron 55.0%
CCTAAAAGGCCCAGAGCCAA+AGG + tig0022346:54719-54738 None:intergenic 55.0%
!!! CCTTTGGCTCTGGGCCTTTT+AGG - tig0022346:54716-54735 Msa1399250:intron 55.0%
GGCGTTCCGATATTTGCCTC+TGG - tig0022346:54839-54858 Msa1399250:intron 55.0%
TGCACAACTCACTCCACCAG+AGG + tig0022346:54858-54877 None:intergenic 55.0%
ATCCCCACCTGATGAGATCG+GGG - tig0022346:55081-55100 Msa1399250:five_prime_UTR 55.0%
TACCCCCGATCTCATCAGGT+GGG + tig0022346:55087-55106 None:intergenic 55.0%
ATACCCCCGATCTCATCAGG+TGG + tig0022346:55088-55107 None:intergenic 55.0%
GTCGTCGTCAGCGCCTAATG+TGG - tig0022346:44827-44846 Msa1399250:three_prime_UTR 60.0%
GATCGTGACGGCCGTATCAG+CGG - tig0022346:44885-44904 Msa1399250:three_prime_UTR 60.0%
CGGCTTCGACACCGCTGATA+CGG + tig0022346:44899-44918 None:intergenic 60.0%
! GGTGAGCTCTGACCTGAGCA+AGG + tig0022346:44959-44978 None:intergenic 60.0%
TTCGCGCTTGCTCTGTGCGA+CGG + tig0022346:45215-45234 None:intergenic 60.0%
GGAAGGCAGAGGAAGCTGCA+GGG + tig0022346:45459-45478 None:intergenic 60.0%
CAGCTTCCTCTGCCTTCCCT+GGG - tig0022346:45461-45480 Msa1399250:intron 60.0%
TCCTCTGCCTTCCCTGGGTA+TGG - tig0022346:45466-45485 Msa1399250:intron 60.0%
CGAGGCATGTTGCCATACCC+AGG + tig0022346:45481-45500 None:intergenic 60.0%
GGGTATGGCAACATGCCTCG+AGG - tig0022346:45481-45500 Msa1399250:intron 60.0%
AGCTGAGAGGACGTTCCTCG+AGG + tig0022346:45499-45518 None:intergenic 60.0%
! CTCTGGCTCCCTCCAGATAC+AGG + tig0022346:45733-45752 None:intergenic 60.0%
! GGTTCTGATTCACTGCCGGC+TGG + tig0022346:45834-45853 None:intergenic 60.0%
GAACCAGCATGCCTCGGTTC+AGG - tig0022346:45849-45868 Msa1399250:intron 60.0%
AAATCACCGGGGAACAGGCG+AGG - tig0022346:46022-46041 Msa1399250:intron 60.0%
CAAGTTCCTCGCCTGTTCCC+CGG + tig0022346:46031-46050 None:intergenic 60.0%
! CCTCCCTGTGTCGCTCCATT+AGG + tig0022346:46307-46326 None:intergenic 60.0%
CCTAATGGAGCGACACAGGG+AGG - tig0022346:46304-46323 Msa1399250:intron 60.0%
! TTGGTGGCCGACCTGCTGTA+GGG + tig0022346:46581-46600 None:intergenic 60.0%
TCAGATGGAGGGACAGCAGC+CGG + tig0022346:46606-46625 None:intergenic 60.0%
ACGGTGATTGTGTCAGCGGG+AGG + tig0022346:46848-46867 None:intergenic 60.0%
CTTTCCTGCCCTCGCAGATG+TGG + tig0022346:52485-52504 None:intergenic 60.0%
CACATCTGCGAGGGCAGGAA+AGG - tig0022346:52483-52502 Msa1399250:intron 60.0%
CCCCGTGAGCTTAGCTCAGT+TGG - tig0022346:53660-53679 Msa1399250:intron 60.0%
AAGGTCCGAGGTTCGAACCC+CGG - tig0022346:53706-53725 Msa1399250:intron 60.0%
CCAGTCCTTAGGCCTTTGCG+GGG + tig0022346:54539-54558 None:intergenic 60.0%
! GACTCGGATCCCTTTGGCTC+TGG - tig0022346:54706-54725 Msa1399250:intron 60.0%
TCCCCACCTGATGAGATCGG+GGG - tig0022346:55082-55101 Msa1399250:five_prime_UTR 60.0%
ACCCCCGATCTCATCAGGTG+GGG + tig0022346:55086-55105 None:intergenic 60.0%
GGGAAGGCAGAGGAAGCTGC+AGG + tig0022346:45460-45479 None:intergenic 65.0%
GCAGCTTCCTCTGCCTTCCC+TGG - tig0022346:45460-45479 Msa1399250:intron 65.0%
GCCATACCCAGGGAAGGCAG+AGG + tig0022346:45470-45489 None:intergenic 65.0%
! CTTGGTGGCCGACCTGCTGT+AGG + tig0022346:46582-46601 None:intergenic 65.0%
CTACAGCAGGTCGGCCACCA+AGG - tig0022346:46580-46599 Msa1399250:intron 65.0%
ACATGCGCTCTGCGCGCATG+TGG + tig0022346:51787-51806 None:intergenic 65.0%
GGTGTCCGGGGTTCGAACCT+CGG + tig0022346:53714-53733 None:intergenic 65.0%
CCCCGCAAAGGCCTAAGGAC+TGG - tig0022346:54536-54555 Msa1399250:CDS 65.0%
GGTGGTTGTGCTTCCCGAGC+AGG + tig0022346:54625-54644 None:intergenic 65.0%
GAAGCTGCAGGGCGAGGTCC+AGG + tig0022346:45448-45467 None:intergenic 70.0%
GCAGAGGAAGCTGCAGGGCG+AGG + tig0022346:45454-45473 None:intergenic 70.0%
GCGCCTGAACCGAGGCATGC+TGG + tig0022346:45855-45874 None:intergenic 70.0%
AGCAGGTCGGCCACCAAGGC+CGG - tig0022346:46584-46603 Msa1399250:intron 70.0%
GGGACAGCAGCCGGCCTTGG+TGG + tig0022346:46597-46616 None:intergenic 75.0%
GGAGGGACAGCAGCCGGCCT+TGG + tig0022346:46600-46619 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
tig0022346 gene 44597 55244 44597 ID=Msa1399250;Name=Msa1399250
tig0022346 mRNA 44597 55244 44597 ID=Msa1399250-mRNA-1;Parent=Msa1399250;Name=Msa1399250-mRNA-1;_AED=0.09;_eAED=0.09;_QI=216|1|1|1|1|1|13|449|984
tig0022346 exon 44597 45474 44597 ID=Msa1399250-mRNA-1:exon:17122;Parent=Msa1399250-mRNA-1
tig0022346 exon 46693 46822 46693 ID=Msa1399250-mRNA-1:exon:17121;Parent=Msa1399250-mRNA-1
tig0022346 exon 48581 48938 48581 ID=Msa1399250-mRNA-1:exon:17120;Parent=Msa1399250-mRNA-1
tig0022346 exon 50264 50332 50264 ID=Msa1399250-mRNA-1:exon:17119;Parent=Msa1399250-mRNA-1
tig0022346 exon 51225 51339 51225 ID=Msa1399250-mRNA-1:exon:17118;Parent=Msa1399250-mRNA-1
tig0022346 exon 51423 51494 51423 ID=Msa1399250-mRNA-1:exon:17117;Parent=Msa1399250-mRNA-1
tig0022346 exon 51597 51695 51597 ID=Msa1399250-mRNA-1:exon:17116;Parent=Msa1399250-mRNA-1
tig0022346 exon 51777 51848 51777 ID=Msa1399250-mRNA-1:exon:17115;Parent=Msa1399250-mRNA-1
tig0022346 exon 52633 52707 52633 ID=Msa1399250-mRNA-1:exon:17114;Parent=Msa1399250-mRNA-1
tig0022346 exon 53083 53312 53083 ID=Msa1399250-mRNA-1:exon:17113;Parent=Msa1399250-mRNA-1
tig0022346 exon 53407 53619 53407 ID=Msa1399250-mRNA-1:exon:17112;Parent=Msa1399250-mRNA-1
tig0022346 exon 53766 54705 53766 ID=Msa1399250-mRNA-1:exon:17111;Parent=Msa1399250-mRNA-1
tig0022346 exon 54876 55244 54876 ID=Msa1399250-mRNA-1:exon:17110;Parent=Msa1399250-mRNA-1
tig0022346 five_prime_UTR 55029 55244 55029 ID=Msa1399250-mRNA-1:five_prime_utr;Parent=Msa1399250-mRNA-1
tig0022346 CDS 54876 55028 54876 ID=Msa1399250-mRNA-1:cds;Parent=Msa1399250-mRNA-1
tig0022346 CDS 53766 54705 53766 ID=Msa1399250-mRNA-1:cds;Parent=Msa1399250-mRNA-1
tig0022346 CDS 53407 53619 53407 ID=Msa1399250-mRNA-1:cds;Parent=Msa1399250-mRNA-1
tig0022346 CDS 53083 53312 53083 ID=Msa1399250-mRNA-1:cds;Parent=Msa1399250-mRNA-1
tig0022346 CDS 52633 52707 52633 ID=Msa1399250-mRNA-1:cds;Parent=Msa1399250-mRNA-1
tig0022346 CDS 51777 51848 51777 ID=Msa1399250-mRNA-1:cds;Parent=Msa1399250-mRNA-1
tig0022346 CDS 51597 51695 51597 ID=Msa1399250-mRNA-1:cds;Parent=Msa1399250-mRNA-1
tig0022346 CDS 51423 51494 51423 ID=Msa1399250-mRNA-1:cds;Parent=Msa1399250-mRNA-1
tig0022346 CDS 51225 51339 51225 ID=Msa1399250-mRNA-1:cds;Parent=Msa1399250-mRNA-1
tig0022346 CDS 50264 50332 50264 ID=Msa1399250-mRNA-1:cds;Parent=Msa1399250-mRNA-1
tig0022346 CDS 48581 48938 48581 ID=Msa1399250-mRNA-1:cds;Parent=Msa1399250-mRNA-1
tig0022346 CDS 46693 46822 46693 ID=Msa1399250-mRNA-1:cds;Parent=Msa1399250-mRNA-1
tig0022346 CDS 45046 45474 45046 ID=Msa1399250-mRNA-1:cds;Parent=Msa1399250-mRNA-1
tig0022346 three_prime_UTR 44597 45045 44597 ID=Msa1399250-mRNA-1:three_prime_utr;Parent=Msa1399250-mRNA-1
Gene Sequence

>Msa1399250

ATGGCATCATCTTCGTCGTCGTCAGCGCCTAATGTGGATCTGTTCGATGCTTATTTCCGTCGTGCCGATTTGGATCGTGACGGCCGTATCAGCGGTGTCGAAGCCGTCTCTTTCTTCCAAGGCTCCGGTTTGCCCAAAAAAGTCCTTGCTCAGATTTGGGAATTTGCAAACACAAATCAGAGTGGTTTCCTAGGTCGTGCAGAGTTCTACAATGCACTTAAACTTGTTACCGTCGCACAGAGCAAGCGCGAACTCACTCCTGAAATGGTTAAAGCTGCATTGTATGGTCCAGCTGCATCCAAGATTCCTGCTCCTCAGATCAATTTTGCTGCCACTGTCACACCCCAATCCACTGCACCAAATCTTGGACCAAGGGGACCTCTTCCAAATCAAAACTCTCAGCCAACTCCATTAGTAAGGCCTCTGCAAAATATGTCTGCCAGTCTACCCACTCAAGGACTTCCTGGACCTCGCCCTGCAGCTTCCTCTGCCTTCCCTGGGTATGGCAACATGCCTCGAGGAACGTCCTCTCAGCTACCAGTTAGAGGAACTAGTCCCGTTGCAATTACAACATCTGCTTCAACTGTTGCACCCCTCGCACCTACTTCATCTGCTAGTAAGCCATCTGATACTTCTGGCAATGGTATAATTGCTTCTGATTCATTTTTCGGAGGGGATTTGTTTTCAACCACCTCATCTCAGCCTAACCAAAACAATTCTCCACAAGGATTTTCATCTGCCATTGTTCCTGTATCTGGAGGGAGCCAGAGTTCTATTAGGACCACCACCCCTGATTCTTTGCAGACCTCACTTGCTACTCACTCTGTTCGTCCACATCTTCAGCAGAACCAGCCGGCAGTGAATCAGAACCAGCATGCCTCGGTTCAGGCGCCTAATATGCCCACTTCATCTGGACTTCCAGTTAGATTGCAGGATTCTGTGTCAGGTCAGCACCAATCTCCATGGCCAAGAATGACTCAGACTGATGTTCAGAAATATACAAGAGTATTCATGGAAGTAGACAGAGATAGAGATGGGAAAATCACCGGGGAACAGGCGAGGAACTTGTTTCTTAGTTGGCAATTACCAAGAGAGGTTTTGAAGCAGGTCTGGGACCTATCTGATCAAGATAATGATAGCATGCTCTCTCTCAGAGAGTTTTGGATTGCACTGTACCTAATGGAGCGACACAGGGAGGGACGCGCTCTTCCAAGTATACTTCCAAATAACATTCTTCCTGATATACCCACGACTACTGGTCAACCTGTCAATCTCCACAGTCCCGTAACTTGGGGAAATCAGTCAGGTGTTCAACAACATCAAGGGATGACTGGATCTGGCGCTCGACAACTCAACCCTACAGCAGGTCGGCCACCAAGGCCGGCTGCTGTCCCTCCATCTGATGAAGGAACTCAAAACAAGCAGCAGAAATCCAAAATTCCAGTCTTGGAGAAGCATCTCATAAATCAACTGAGTTCAGATGAGCAAAACTCAATTAACTCGAAGTTTCAAGAAGCAACAGAAGCTGATAAGAAGGTAGAAGAACTTGAGAAAGAAATAGTGGAGTCCCGAGAGAAAATAGAATTCTTCCGTGCAAAAATGCAAGAACTTGTTATATACAAGAGCCGATGCGACAATCGTCTTAACGAGATCATGGAAAGGATATCTGCTGATAAACATGAGGTAGACAATCTAGCAAAGAAATATGAAGATAAATATAAGCAAGTTGGAGATGTATCATCCAAGTTGACAACGGAGGAAGCCACATTCCGTGACATACAGGAGAAAAAGATTGAATTATACCAAGGGATTGTCAAGTTGGAACAGGATGTAAATACTGATGACACTGTACAGGTCCGTGCTGATCGCATCAATTCTGACTTTGATGAACTGGTCAAATCTCTAAATGAACGGTGCAAGAAGTATGGATTACGTGCAAAGCCCACGACATTAGTGGAGCTACCCTTTGGCTGGCAACCTGGTATCCAAGAAGGAGCTGCTGATTGGGATGAGGATTGGGATAAGCTTGAAGATAAAGAATTTACTCTTGTCAAAGAATACACTCTCGATGTGCAAAACACCATAGCGCCTCCAAAACAAAAGCAACCAAAGGCTGTGAACGCAAAAGCTTTGGATGTTGACAGTCCAAAATTTGTAGCGTCGCCTAAGAGTGATGATAAATCAGAAAAACCTCAGACTACAAATGAACAGGGAGTAGGCAACGGATCTGTTTATAACAAAAGTGATGATGGGTCTGCGAAAAGTGCTCCTAATAGTCCATTTGCAAGCAGTACTATCGGAAGTCCGCATAGGGACTTTGTTGATTCTGACATTCGAAAGACTTCCGGTGAAGATAGCTCACCCCGTAATCAAGATGATGCGCAAGAAACCCAAAGTGATCATGGTGGTGAGAAGTCTGTGTTTTCTGAAGAAAGAGTTTTTGACGAACCTAATTGGGGAACCTTTGACACAAATGATGATATTGATTCAGTTTGGGGATTCAATGCCAGTAGCATCACTAAGGAGGAGAGAGAGCTTGATGGAGCTGGAGACAACTATTTCTTTAGTTCTGGAGACCTGGGCCTCAACCCCATTAAAACATCTTCACCACAGGCTGCTGATCTCTTCCAGAAGACCAGTGGATTCAGTTTTGATGATTCTGTTCCAAGCACCCCACTTTTCAGCTCAAGCAATTCCCCGCAAAGGCCTAAGGACTGGTTGGAAAACGCTTTTGACTTTTCAAGATTTGATTCATTTAGCACACACGATAGTGTATCTTTACCTGCTCGGGAAGCACAACCACCAGTACGATTTGATTCTGTCCGCAGCAGTGCGGATTTTGATCATGGTTTTCCTGCTTTTGATGACTCGGATCCCTTTGGCTCTGGGCCTTTTAGGACTTCATCAGAAAGTCAAACTCCTAGAAAAGGATCTGATAATTGGAGTGCTTTTTAG
Protein sequence

>Msa1399250

MASSSSSSAPNVDLFDAYFRRADLDRDGRISGVEAVSFFQGSGLPKKVLAQIWEFANTNQSGFLGRAEFYNALKLVTVAQSKRELTPEMVKAALYGPAASKIPAPQINFAATVTPQSTAPNLGPRGPLPNQNSQPTPLVRPLQNMSASLPTQGLPGPRPAASSAFPGYGNMPRGTSSQLPVRGTSPVAITTSASTVAPLAPTSSASKPSDTSGNGIIASDSFFGGDLFSTTSSQPNQNNSPQGFSSAIVPVSGGSQSSIRTTTPDSLQTSLATHSVRPHLQQNQPAVNQNQHASVQAPNMPTSSGLPVRLQDSVSGQHQSPWPRMTQTDVQKYTRVFMEVDRDRDGKITGEQARNLFLSWQLPREVLKQVWDLSDQDNDSMLSLREFWIALYLMERHREGRALPSILPNNILPDIPTTTGQPVNLHSPVTWGNQSGVQQHQGMTGSGARQLNPTAGRPPRPAAVPPSDEGTQNKQQKSKIPVLEKHLINQLSSDEQNSINSKFQEATEADKKVEELEKEIVESREKIEFFRAKMQELVIYKSRCDNRLNEIMERISADKHEVDNLAKKYEDKYKQVGDVSSKLTTEEATFRDIQEKKIELYQGIVKLEQDVNTDDTVQVRADRINSDFDELVKSLNERCKKYGLRAKPTTLVELPFGWQPGIQEGAADWDEDWDKLEDKEFTLVKEYTLDVQNTIAPPKQKQPKAVNAKALDVDSPKFVASPKSDDKSEKPQTTNEQGVGNGSVYNKSDDGSAKSAPNSPFASSTIGSPHRDFVDSDIRKTSGEDSSPRNQDDAQETQSDHGGEKSVFSEERVFDEPNWGTFDTNDDIDSVWGFNASSITKEERELDGAGDNYFFSSGDLGLNPIKTSSPQAADLFQKTSGFSFDDSVPSTPLFSSSNSPQRPKDWLENAFDFSRFDSFSTHDSVSLPAREAQPPVRFDSVRSSADFDHGFPAFDDSDPFGSGPFRTSSESQTPRKGSDNWSAF*