AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0549420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0549420 MtrunA17_Chr4g0033701 95.996 974 30 2 1 966 1 973 0.0 1906
Msa0549420 MtrunA17_Chr3g0118501 41.593 226 103 6 428 648 455 656 8.88e-38 153
Msa0549420 MtrunA17_Chr3g0118501 30.952 210 120 4 95 287 42 243 1.25e-25 114
Msa0549420 MtrunA17_Chr3g0118501 28.431 204 89 4 17 165 41 242 3.20e-13 73.9
Msa0549420 MtrunA17_Chr3g0096561 30.539 167 107 4 17 174 196 362 1.70e-13 75.1
Msa0549420 MtrunA17_Chr2g0304041 29.940 167 108 4 17 174 194 360 2.27e-13 74.7
Msa0549420 MtrunA17_Chr3g0133651 24.444 180 108 3 16 167 184 363 1.39e-11 67.8
Msa0549420 MtrunA17_Chr3g0134141 31.217 189 99 6 6 163 190 378 5.91e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0549420 AT2G43410.4 42.249 987 411 28 6 946 6 879 0.0 622
Msa0549420 AT2G43410.3 42.249 987 411 28 6 946 6 879 0.0 622
Msa0549420 AT2G43410.2 42.249 987 411 28 6 946 6 879 0.0 622
Msa0549420 AT2G43410.6 41.309 978 390 30 6 946 6 836 0.0 580
Msa0549420 AT2G43410.1 41.309 978 390 30 6 946 6 836 0.0 580
Msa0549420 AT2G43410.5 40.493 852 349 28 141 946 1 740 1.68e-146 454
Msa0549420 AT4G12640.3 53.846 130 59 1 463 591 340 469 2.73e-35 144
Msa0549420 AT4G12640.3 37.500 80 50 0 211 290 18 97 1.10e-14 79.0
Msa0549420 AT4G12640.2 53.846 130 59 1 463 591 340 469 2.73e-35 144
Msa0549420 AT4G12640.2 37.500 80 50 0 211 290 18 97 1.10e-14 79.0
Msa0549420 AT4G12640.4 53.846 130 59 1 463 591 340 469 2.73e-35 144
Msa0549420 AT4G12640.4 37.500 80 50 0 211 290 18 97 1.10e-14 79.0
Msa0549420 AT4G12640.1 53.846 130 59 1 463 591 468 597 5.07e-35 144
Msa0549420 AT4G12640.1 29.064 203 136 2 96 290 23 225 1.65e-24 110
Msa0549420 AT4G12640.1 28.502 207 92 3 17 169 21 225 2.01e-14 78.6
Msa0549420 AT1G29400.1 30.120 166 107 4 17 173 166 331 9.24e-13 72.8
Msa0549420 AT1G29400.2 30.120 166 107 4 17 173 166 331 9.24e-13 72.8
Msa0549420 AT1G29400.3 30.120 166 107 4 17 173 166 331 9.24e-13 72.8
Msa0549420 AT4G34110.1 27.933 179 98 4 9 156 205 383 1.96e-12 71.6

Find 310 sgRNAs with CRISPR-Local

Find 752 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTATCAGCCTCCAATTC+TGG 0.097634 4_1:-44554817 None:intergenic
GGTCCTGAATCTGTTGTTTC+TGG 0.116220 4_1:+44552595 Msa0549420:CDS
CATTCATTCATTCTCTTTCT+AGG 0.130788 4_1:+44548242 Msa0549420:five_prime_UTR
GGGCCTTCTGATTCTTATTC+TGG 0.161718 4_1:+44551863 Msa0549420:CDS
TAAAGTTGTATTGTCAAATT+TGG 0.168038 4_1:-44553687 None:intergenic
ACCGATCCACAAAATATTAT+TGG 0.169786 4_1:-44552155 None:intergenic
GCTCTAAACACTGCTGCTTC+TGG 0.180393 4_1:+44554034 Msa0549420:CDS
GAAGCTGACTTCCGTAAATT+TGG 0.196602 4_1:+44551009 Msa0549420:CDS
TTCTCTCAATTTCACCAAAA+AGG 0.199462 4_1:-44552228 None:intergenic
CCTGATAGTGAAAATGATTT+TGG 0.203529 4_1:+44553611 Msa0549420:CDS
GAGATTGAGGGTGAAAATTT+AGG 0.213751 4_1:-44548279 None:intergenic
GTGTTTGCTGCTGCTGTATT+TGG 0.231145 4_1:-44554885 None:intergenic
CAATTTAGATGATGCTATTC+AGG 0.239202 4_1:+44551089 Msa0549420:CDS
TAGGATCAAGGGCATGATTA+TGG 0.245432 4_1:+44551818 Msa0549420:intron
ATGGAAACCAATCTCAATTA+TGG 0.247838 4_1:+44554209 Msa0549420:CDS
AGATAAGGCAATAGAATTAT+TGG 0.248232 4_1:-44554677 None:intergenic
TGACAATACAACTTTATTCT+TGG 0.252905 4_1:+44553694 Msa0549420:CDS
CCTGCACAAATGGATTTATT+TGG 0.253349 4_1:+44552472 Msa0549420:CDS
AAAGGATGGTGGTTATTATT+AGG 0.257498 4_1:-44554586 None:intergenic
GGAAAGCCTTTCTGAGTATT+GGG 0.258137 4_1:-44554517 None:intergenic
CCTCAACTTTACCAAATTTA+CGG 0.262943 4_1:-44551020 None:intergenic
CAATTTCAAGGCAAAAGCTT+TGG 0.284058 4_1:+44551842 Msa0549420:CDS
AAGTCTTCCTTTGTTACAGC+TGG 0.289360 4_1:-44550985 None:intergenic
AAAACTTGTTCCTCCTTTGC+AGG 0.299893 4_1:-44553902 None:intergenic
TCCATTTGTGCAGGTCGATA+TGG 0.316621 4_1:-44552463 None:intergenic
AACATACCAGTGCGGCCTTT+TGG 0.326240 4_1:+44552562 Msa0549420:CDS
CTCTAAACACTGCTGCTTCT+GGG 0.329449 4_1:+44554035 Msa0549420:CDS
TATTGGGTTGCTGGAAAGGC+TGG 0.336634 4_1:-44554660 None:intergenic
TCTTATCAGCCTCCAATTCT+GGG 0.337707 4_1:-44554816 None:intergenic
CCGATCCACAAAATATTATT+GGG 0.339050 4_1:-44552154 None:intergenic
CTGTCCAACCTGATCATATA+TGG 0.339151 4_1:+44552890 Msa0549420:CDS
CAATAGAATTATTGGGTTGC+TGG 0.347240 4_1:-44554669 None:intergenic
TCACCCTTCCTCCTCATTAG+AGG 0.348403 4_1:-44552124 None:intergenic
TGGAAAGCCTTTCTGAGTAT+TGG 0.351377 4_1:-44554518 None:intergenic
TATTAGATTGCTGGAAATGC+TGG 0.352756 4_1:-44554630 None:intergenic
TGAGATTGGTTTCCATCATT+AGG 0.353476 4_1:-44554202 None:intergenic
CCATTTCAGTCATCAGTATC+AGG 0.355693 4_1:+44554483 Msa0549420:CDS
GGTGGTTATTATTAGGTTGC+TGG 0.356161 4_1:-44554579 None:intergenic
AATTTCAAGGCAAAAGCTTT+GGG 0.356333 4_1:+44551843 Msa0549420:CDS
AATACTCAGAAAGGCTTTCC+AGG 0.356895 4_1:+44554520 Msa0549420:CDS
TGCTCATCGATCTGAACATT+GGG 0.358626 4_1:-44552184 None:intergenic
GATAAGGCAATAGAATTATT+GGG 0.360190 4_1:-44554676 None:intergenic
GGAGATGGCCGTTTCCAGTT+TGG 0.361061 4_1:-44552655 None:intergenic
TGGGAGGGTTTGAGTTTACT+TGG 0.361172 4_1:-44554756 None:intergenic
ATAACAATTAATTATTCTAA+TGG 0.365926 4_1:+44552358 Msa0549420:CDS
CAAAGACATGTAAACAGCTT+TGG 0.367048 4_1:+44550947 Msa0549420:CDS
GGAGCTGATGCTGGCGGGTA+AGG 0.367212 4_1:-44554319 None:intergenic
GTAGGCAATGTGTTGTGGTT+AGG 0.368981 4_1:+44558304 Msa0549420:three_prime_UTR
CCTGTTTCCATAATTGAGAT+TGG 0.373414 4_1:-44554216 None:intergenic
CTACAAGCTATAAAATTGTA+AGG 0.376634 4_1:+44558449 Msa0549420:three_prime_UTR
GTCGATATGGATGCTCATTT+AGG 0.379208 4_1:-44552450 None:intergenic
TCAGCAAGCACGAGGATTAC+AGG 0.381172 4_1:+44552853 Msa0549420:CDS
GTTGCTTTCTTCTCCTGTAC+CGG 0.384572 4_1:+44552690 Msa0549420:CDS
TTCATCCATCTCAGCAGTTT+AGG 0.385340 4_1:+44554263 Msa0549420:CDS
CAACCCCATCGAACAACCTA+TGG 0.392362 4_1:+44548389 Msa0549420:CDS
AAACAACTCCTTGCTGTTGC+TGG 0.392476 4_1:-44554399 None:intergenic
CGCGTTGGCTTCGCCGGAGG+CGG 0.393982 4_1:-44548349 None:intergenic
TTCAGTTCAGCCTGCAGCTC+CGG 0.394225 4_1:+44554006 Msa0549420:CDS
CAGGATGTTGTTGGATGGGA+GGG 0.394689 4_1:-44554771 None:intergenic
CACACTGCTCAAACGTTCTC+TGG 0.395604 4_1:+44554346 Msa0549420:CDS
ACCGGACCTGAACGTCTATA+TGG 0.396280 4_1:+44553755 Msa0549420:CDS
GCACCAGAGGACGATCTTGC+AGG 0.397152 4_1:-44552724 None:intergenic
GTCCCGATCCCTTTCCCTAC+AGG 0.398087 4_1:-44552964 None:intergenic
CATGATTATGGGCAATTTCA+AGG 0.399213 4_1:+44551830 Msa0549420:CDS
GCTGAGCAATCCACAACTTC+AGG 0.404831 4_1:-44553518 None:intergenic
AAAGGCCGCACTGGTATGTT+TGG 0.408813 4_1:-44552559 None:intergenic
GGGCCAGAAACAACAGATTC+AGG 0.409831 4_1:-44552598 None:intergenic
CCAATCTCAATTATGGAAAC+AGG 0.412968 4_1:+44554216 Msa0549420:CDS
ATCCAACAACATCCTGCCTT+TGG 0.413305 4_1:+44554778 Msa0549420:CDS
CTTGACCGCTTAGAATCTCT+TGG 0.413595 4_1:-44552775 None:intergenic
TAGGCAATGTGTTGTGGTTA+GGG 0.415212 4_1:+44558305 Msa0549420:three_prime_UTR
ATTCATTCATTCTCTTTCTA+GGG 0.421627 4_1:+44548243 Msa0549420:five_prime_UTR
GGAAAACTATTCGGAATCAT+AGG 0.421962 4_1:-44552505 None:intergenic
GGACCAACAATACCACCATT+TGG 0.422900 4_1:-44552538 None:intergenic
TGCTGCATATATTGATTTGA+CGG 0.422942 4_1:-44553845 None:intergenic
AATTCTTATTGTTGAACTCC+TGG 0.423221 4_1:-44554922 None:intergenic
GCTATTGATGGTGCTAAGTC+AGG 0.423793 4_1:+44554136 Msa0549420:CDS
GCTGCTTCTGGGTCTCAAGC+TGG 0.425452 4_1:+44554046 Msa0549420:CDS
CCTGCATAAGGATCATCATT+AGG 0.427328 4_1:-44552814 None:intergenic
CCTGATACTGATGACTGAAA+TGG 0.428781 4_1:-44554483 None:intergenic
CTTCTCCTGTACCGGGTGCT+AGG 0.429255 4_1:+44552698 Msa0549420:CDS
CTGATACTGATGACTGAAAT+GGG 0.431421 4_1:-44554482 None:intergenic
TTAGGTGCCACAGGAGGAAA+TGG 0.431524 4_1:-44554184 None:intergenic
AAAGACATGTAAACAGCTTT+GGG 0.432400 4_1:+44550948 Msa0549420:CDS
TTTAGGAATAAATCAGGTCT+TGG 0.437023 4_1:-44552433 None:intergenic
TCAAATCGCAATGCCGCCTC+CGG 0.437304 4_1:+44548336 Msa0549420:exon
AGCAGGCGACTGCGCATTTG+TGG 0.438260 4_1:-44554116 None:intergenic
AGGATCAAGGGCATGATTAT+GGG 0.438392 4_1:+44551819 Msa0549420:intron
GCGCAGTCGCCTGCTATTGA+TGG 0.439362 4_1:+44554124 Msa0549420:CDS
CACTACACAAGGGTCCAAAC+TGG 0.441262 4_1:+44552641 Msa0549420:CDS
TTCTGATTTCTGTAGGATCA+AGG 0.441799 4_1:+44551806 Msa0549420:intron
ACGACACCATATAGACGTTC+AGG 0.443101 4_1:-44553761 None:intergenic
TCCATATCGACCTGCACAAA+TGG 0.445163 4_1:+44552462 Msa0549420:CDS
GGTGGGTATACTTGTTTAGC+AGG 0.449460 4_1:-44553968 None:intergenic
AAAACAGAGACATCACTTCC+TGG 0.449512 4_1:-44554538 None:intergenic
GAAAATTGAGTTTGCTAGAC+CGG 0.451942 4_1:+44548597 Msa0549420:CDS
CGTGCAAAAGAGGGTCTTCA+AGG 0.452298 4_1:+44552313 Msa0549420:CDS
TTGGGTTGCTGGAAAGGCTG+GGG 0.453886 4_1:-44554658 None:intergenic
TCCCTGTAGGGAAAGGGATC+GGG 0.457883 4_1:+44552962 Msa0549420:CDS
AATTGTCCAGGAAAACTATT+CGG 0.458412 4_1:-44552514 None:intergenic
TATGCAGGGAGGGGTATCCT+TGG 0.458760 4_1:+44552829 Msa0549420:CDS
GGTAGTCTTTGCCGTGTACC+TGG 0.459292 4_1:-44552384 None:intergenic
ATTGGGTTGCTGGAAAGGCT+GGG 0.459495 4_1:-44554659 None:intergenic
TAGAATCCTCGTGCAACATT+CGG 0.459528 4_1:-44553940 None:intergenic
ACAGATTCAGGACCACCATT+AGG 0.461128 4_1:-44552586 None:intergenic
TGCTCATTTAGGAATAAATC+AGG 0.461490 4_1:-44552439 None:intergenic
TCTAAGCGGTCAAGGATAGA+TGG 0.465332 4_1:+44552784 Msa0549420:CDS
CCTAATGATGATCCTTATGC+AGG 0.466313 4_1:+44552814 Msa0549420:CDS
GGAAGCCTAGCACCCGGTAC+AGG 0.467553 4_1:-44552703 None:intergenic
CAAGATCGTCCTCTGGTGCA+TGG 0.467928 4_1:+44552728 Msa0549420:CDS
TTGCCAAATGGTGGTATTGT+TGG 0.468800 4_1:+44552535 Msa0549420:CDS
CTCCAAAGGCAGGATGTTGT+TGG 0.472577 4_1:-44554780 None:intergenic
TATTAGGTTGCTGGAAAGGA+TGG 0.472991 4_1:-44554600 None:intergenic
TGAAGAAGCTTGCGAGATTG+AGG 0.473941 4_1:-44548292 None:intergenic
ACCATATAGACGTTCAGGTC+CGG 0.474787 4_1:-44553756 None:intergenic
TTGCTCAGCTAGGACGGGAT+TGG 0.474876 4_1:+44553532 Msa0549420:CDS
AGAGCATAGTCCGGAGCTGC+AGG 0.474877 4_1:-44554016 None:intergenic
CCACCATTTGGCAATTGTCC+AGG 0.476649 4_1:-44552526 None:intergenic
CTGTATTTGGAGTAGAAGAT+TGG 0.476680 4_1:-44554872 None:intergenic
ATATATTGATTTGACGGTAC+AGG 0.477091 4_1:-44553839 None:intergenic
GGCGGCATTGCGATTTGAAA+AGG 0.478835 4_1:-44548331 None:intergenic
GCTGCAGGCTGAACTGAAGA+AGG 0.481469 4_1:-44554001 None:intergenic
GAATTATTGGGTTGCTGGAA+AGG 0.483256 4_1:-44554664 None:intergenic
AGGATACCCCTCCCTGCATA+AGG 0.483990 4_1:-44552826 None:intergenic
TTATTATTAGGTTGCTGGAA+AGG 0.484653 4_1:-44554604 None:intergenic
ACTGTTAACTTGACTAGATA+AGG 0.485918 4_1:-44554692 None:intergenic
AACCCTTGTGCAGGAGGAGA+TGG 0.486175 4_1:-44552670 None:intergenic
GAGTCTCGCGTTGGCTTCGC+CGG 0.486646 4_1:-44548355 None:intergenic
CAACATCCTGCCTTTGGAGT+TGG 0.486698 4_1:+44554784 Msa0549420:CDS
CCTCCTGTGGCACCTAATGA+TGG 0.487831 4_1:+44554190 Msa0549420:CDS
TTGCTTTCTTCTCCTGTACC+GGG 0.488175 4_1:+44552691 Msa0549420:CDS
CCTGCCTTTGGAGTTGGTCA+AGG 0.489677 4_1:+44554790 Msa0549420:CDS
GAAGAAAGCAACCCTTGTGC+AGG 0.494496 4_1:-44552679 None:intergenic
ACGCATCTAGCACGACAAAC+AGG 0.495036 4_1:-44552940 None:intergenic
CAGCAAACACAAGGAGGACA+TGG 0.495449 4_1:+44554898 Msa0549420:CDS
TTGCTCATCGATCTGAACAT+TGG 0.497659 4_1:-44552185 None:intergenic
AGTCTTCCTTTGTTACAGCT+GGG 0.500459 4_1:-44550984 None:intergenic
ATTAGATTGCTGGAAATGCT+GGG 0.500474 4_1:-44554629 None:intergenic
GCAGGCGACTGCGCATTTGT+GGG 0.500753 4_1:-44554115 None:intergenic
CAACCCATAGGTTGTTCGAT+GGG 0.503220 4_1:-44548393 None:intergenic
ATGGGCACACCACTCGGTAC+TGG 0.503902 4_1:-44553797 None:intergenic
CGTGCTAGATGCGTCCCTGT+AGG 0.504132 4_1:+44552949 Msa0549420:CDS
ACAAGGGTCCAAACTGGAAA+CGG 0.504707 4_1:+44552647 Msa0549420:CDS
CATTTGAGAGTCAAAATAAA+CGG 0.505315 4_1:-44558276 None:intergenic
GTACTATTCTCGTTAAACTC+AGG 0.507590 4_1:-44552619 None:intergenic
TGAAGCCCGGCGTGCAAAAG+AGG 0.507690 4_1:+44552303 Msa0549420:CDS
GGCGAAGCCAACGCGAGACT+CGG 0.508122 4_1:+44548357 Msa0549420:CDS
AGCTGTAACAAAGGAAGACT+TGG 0.508151 4_1:+44550987 Msa0549420:CDS
TTTCCATCATTAGGTGCCAC+AGG 0.509189 4_1:-44554193 None:intergenic
GATTTGAAAAGGTGGTGCTC+TGG 0.509816 4_1:-44548320 None:intergenic
GCAATGTTGACTGGTATCTC+TGG 0.511378 4_1:-44554840 None:intergenic
CCAAATAAATCCATTTGTGC+AGG 0.512876 4_1:-44552472 None:intergenic
GCAGGATGTTGTTGGATGGG+AGG 0.513014 4_1:-44554772 None:intergenic
TTATTGCAGTCCTGAAGTTG+TGG 0.515252 4_1:+44553508 Msa0549420:intron
GCAGCAGATGCCTCCTTCAC+AGG 0.516244 4_1:+44553862 Msa0549420:CDS
AGTCCGCGCCATATATGATC+AGG 0.517580 4_1:-44552898 None:intergenic
TGGGTTGCTGGAAAGGCTGG+GGG 0.517726 4_1:-44554657 None:intergenic
GAAGAAGCTTGCGAGATTGA+GGG 0.518428 4_1:-44548291 None:intergenic
TTATGTGAGGATCATTGAAA+AGG 0.521470 4_1:-44552339 None:intergenic
CAGGCAATGAAAATTATGAA+TGG 0.521937 4_1:+44551108 Msa0549420:CDS
CGGCCATCTCCTCCTGCACA+AGG 0.521991 4_1:+44552667 Msa0549420:CDS
TTAGAAGTGTTGATGAAGCC+CGG 0.522556 4_1:+44552290 Msa0549420:CDS
GCGATAGATTCGCAACCCAT+AGG 0.523153 4_1:-44548405 None:intergenic
GAAAGCAACCCTTGTGCAGG+AGG 0.523157 4_1:-44552676 None:intergenic
TTTCCTGGACAATTGCCAAA+TGG 0.523635 4_1:+44552523 Msa0549420:CDS
TCCCGATCCCTTTCCCTACA+GGG 0.525751 4_1:-44552963 None:intergenic
CGTAACAGATTCCGATCTGA+TGG 0.526096 4_1:+44548432 Msa0549420:CDS
GGCTAGGAGCTGATGCTGGC+GGG 0.527341 4_1:-44554324 None:intergenic
ATGGATCTGTTCGTTCAATA+CGG 0.527602 4_1:+44548451 Msa0549420:CDS
GTCCCTGTAGGGAAAGGGAT+CGG 0.529505 4_1:+44552961 Msa0549420:CDS
GTGTGGCTAGGAGCTGATGC+TGG 0.530010 4_1:-44554328 None:intergenic
ATATTCCTAAACTGCTGAGA+TGG 0.530149 4_1:-44554268 None:intergenic
CCGTAAATTTGGTAAAGTTG+AGG 0.532036 4_1:+44551020 Msa0549420:CDS
GTGCTAGATGCGTCCCTGTA+GGG 0.533606 4_1:+44552950 Msa0549420:CDS
AGATGCGTCCCTGTAGGGAA+AGG 0.534006 4_1:+44552955 Msa0549420:CDS
ACTGAATTCCTACGCTACCT+TGG 0.534308 4_1:+44553641 Msa0549420:CDS
TCTGATTTCTGTAGGATCAA+GGG 0.536341 4_1:+44551807 Msa0549420:intron
GATGGTGCTAAGTCAGGTGC+AGG 0.536831 4_1:+44554142 Msa0549420:CDS
AGATCGGAATCTGTTACGTC+CGG 0.538460 4_1:-44548427 None:intergenic
TGGCGCGGACTTATTGCAAA+AGG 0.538802 4_1:+44552910 Msa0549420:CDS
GTGGATTGCTCAGCTAGGAC+GGG 0.539227 4_1:+44553527 Msa0549420:CDS
TGTGGATTGCTCAGCTAGGA+CGG 0.539501 4_1:+44553526 Msa0549420:CDS
AAAGGCAGGATGTTGTTGGA+TGG 0.541768 4_1:-44554776 None:intergenic
GGACCACCATTAGGACCAAA+AGG 0.541806 4_1:-44552577 None:intergenic
TTACTCCCAGGATAAAAGCC+AGG 0.542415 4_1:-44552406 None:intergenic
CTTATCAGCCTCCAATTCTG+GGG 0.544273 4_1:-44554815 None:intergenic
ATACAGCAGCAGCAAACACA+AGG 0.544795 4_1:+44554889 Msa0549420:CDS
CGAGAATAGTACACTACACA+AGG 0.544963 4_1:+44552630 Msa0549420:CDS
AAACTGCTGAGATGGATGAA+TGG 0.547559 4_1:-44554260 None:intergenic
TGACTTTCAGAACATCTGTC+AGG 0.549338 4_1:-44553733 None:intergenic
TTTGTGACACCTACTCAAAG+TGG 0.549607 4_1:+44554442 Msa0549420:CDS
CTTCCTGCAAGATCGTCCTC+TGG 0.550724 4_1:+44552721 Msa0549420:CDS
TTATCAGCCTCCAATTCTGG+GGG 0.550904 4_1:-44554814 None:intergenic
AAGATCGTCCTCTGGTGCAT+GGG 0.551796 4_1:+44552729 Msa0549420:CDS
CATTAGCCCAGCTGTAACAA+AGG 0.552756 4_1:+44550978 Msa0549420:CDS
AGCAAACACAAGGAGGACAT+GGG 0.554228 4_1:+44554899 Msa0549420:CDS
AAGGCAGGATGTTGTTGGAT+GGG 0.554386 4_1:-44554775 None:intergenic
GATTCATCCGAGTCTCGCGT+TGG 0.554911 4_1:-44548364 None:intergenic
GCTAAAGTTGCAATAAGCTC+AGG 0.556924 4_1:-44554082 None:intergenic
GATGCGTCCCTGTAGGGAAA+GGG 0.557384 4_1:+44552956 Msa0549420:CDS
TGGTGCATGGGCACACCACT+CGG 0.558310 4_1:-44553803 None:intergenic
TACTATTCTCGTTAAACTCA+GGG 0.558382 4_1:-44552618 None:intergenic
TGTAAACAGCTTTGGGTAGG+TGG 0.560436 4_1:+44550955 Msa0549420:CDS
TGATGATCCTTATGCAGGGA+GGG 0.561419 4_1:+44552819 Msa0549420:CDS
AAATGTGATGATTGGTGCAT+GGG 0.561477 4_1:-44553815 None:intergenic
TAGGTTGCTGGAAAGGATGG+TGG 0.562364 4_1:-44554597 None:intergenic
GCAGTGTTTAGAGCATAGTC+CGG 0.563661 4_1:-44554025 None:intergenic
GATGATCCTTATGCAGGGAG+GGG 0.566193 4_1:+44552820 Msa0549420:CDS
AACCCATAGGTTGTTCGATG+GGG 0.567584 4_1:-44548392 None:intergenic
TGGCTAGGAGCTGATGCTGG+CGG 0.567995 4_1:-44554325 None:intergenic
GGCATTGCGATTTGAAAAGG+TGG 0.570128 4_1:-44548328 None:intergenic
CCTTGACCAACTCCAAAGGC+AGG 0.570169 4_1:-44554790 None:intergenic
TTAGGACCAAAAGGCCGCAC+TGG 0.570367 4_1:-44552568 None:intergenic
TGTCCAGAATAAGAATCAGA+AGG 0.570600 4_1:-44551866 None:intergenic
GGGGCCTTGACCAACTCCAA+AGG 0.571607 4_1:-44554794 None:intergenic
GAAAGCCTTTCTGAGTATTG+GGG 0.571826 4_1:-44554516 None:intergenic
TGAATGGAAAACGTATCGGT+GGG 0.572266 4_1:+44551124 Msa0549420:CDS
CCTGGACAATTGCCAAATGG+TGG 0.572421 4_1:+44552526 Msa0549420:CDS
GACTTAGCACCATCAATAGC+AGG 0.572620 4_1:-44554133 None:intergenic
GAATAATTAATTGTTATGTG+AGG 0.572695 4_1:-44552352 None:intergenic
AGAATTCACAACCTCTAATG+AGG 0.573031 4_1:+44552113 Msa0549420:intron
ATGAATGGAAAACGTATCGG+TGG 0.574430 4_1:+44551123 Msa0549420:CDS
GAAGCCCGGCGTGCAAAAGA+GGG 0.575985 4_1:+44552304 Msa0549420:CDS
TAATTATTCTAATGGTGACC+AGG 0.576148 4_1:+44552366 Msa0549420:CDS
GAAGAAGGCCCACCTGTAGG+TGG 0.576313 4_1:-44553986 None:intergenic
GTACAGGCAAATGTGATGAT+TGG 0.577435 4_1:-44553823 None:intergenic
ATTTGAAAAGGTGGTGCTCT+GGG 0.579257 4_1:-44548319 None:intergenic
CAGCAAACTGCAATGTTGAC+TGG 0.579945 4_1:-44554849 None:intergenic
CGCGGACTTATTGCAAAAGG+AGG 0.580144 4_1:+44552913 Msa0549420:CDS
ATTATGAATGGAAAACGTAT+CGG 0.581147 4_1:+44551120 Msa0549420:CDS
AACGTTTGAGCAGTGTGGCT+AGG 0.581449 4_1:-44554340 None:intergenic
ACACAAGGAGGACATGGGCC+AGG 0.585207 4_1:+44554904 Msa0549420:CDS
ACAACCTCTAATGAGGAGGA+AGG 0.585543 4_1:+44552120 Msa0549420:CDS
CAAGAGATTCTAAGCGGTCA+AGG 0.586806 4_1:+44552776 Msa0549420:CDS
AAACAAGTATACCCACCTAC+AGG 0.589718 4_1:+44553974 Msa0549420:CDS
GCAACCCATAGGTTGTTCGA+TGG 0.590016 4_1:-44548394 None:intergenic
GACACCTACTCAAAGTGGAC+AGG 0.591054 4_1:+44554447 Msa0549420:CDS
TCTGCGGTATATTGCATGAC+AGG 0.592140 4_1:-44554733 None:intergenic
GCTACCTGTCCACTTTGAGT+AGG 0.593575 4_1:-44554451 None:intergenic
AAATGGAGGCTTCACAGTTG+AGG 0.594398 4_1:-44554167 None:intergenic
GAAGCCTCCATTTCCTCCTG+TGG 0.594524 4_1:+44554177 Msa0549420:CDS
TGACTCTCAAATGGACGCGT+AGG 0.594707 4_1:+44558286 Msa0549420:three_prime_UTR
GAATGAATGTTATGTTGTGA+GGG 0.594911 4_1:-44548228 None:intergenic
AACCCCATCGAACAACCTAT+GGG 0.595453 4_1:+44548390 Msa0549420:CDS
TCTCGCGTTGGCTTCGCCGG+AGG 0.596019 4_1:-44548352 None:intergenic
TGATATGAATCCTGCAAAGG+AGG 0.599679 4_1:+44553892 Msa0549420:CDS
ACAGATGTTCTGAAAGTCAC+CGG 0.604625 4_1:+44553737 Msa0549420:CDS
GTGCAAAAGAGGGTCTTCAA+GGG 0.607314 4_1:+44552314 Msa0549420:CDS
GGTCTTGGCCCATTACTCCC+AGG 0.609272 4_1:-44552418 None:intergenic
TGAATGAATGTTATGTTGTG+AGG 0.609985 4_1:-44548229 None:intergenic
GTTTGAGTTTACTTGGTCTG+CGG 0.610068 4_1:-44554749 None:intergenic
CTCATCGATCTGAACATTGG+GGG 0.610203 4_1:-44552182 None:intergenic
CGCGCCATATATGATCAGGT+TGG 0.610547 4_1:-44552894 None:intergenic
AAGTTGTGGATTGCTCAGCT+AGG 0.610739 4_1:+44553522 Msa0549420:CDS
AAAGCCTTTCTGAGTATTGG+GGG 0.611169 4_1:-44554515 None:intergenic
TCATATTCAGCCTGTGAAGG+AGG 0.612052 4_1:-44553872 None:intergenic
GCTCATCGATCTGAACATTG+GGG 0.613416 4_1:-44552183 None:intergenic
CAAATGTGATGATTGGTGCA+TGG 0.614034 4_1:-44553816 None:intergenic
CAGCAGCAGCAAACACAAGG+AGG 0.615115 4_1:+44554892 Msa0549420:CDS
TCCTCGTGCTTGCTGAACCA+AGG 0.616126 4_1:-44552846 None:intergenic
ATATCATATTCAGCCTGTGA+AGG 0.617175 4_1:-44553875 None:intergenic
CAAGTATACCCACCTACAGG+TGG 0.619282 4_1:+44553977 Msa0549420:CDS
TAGATTGCTGGAAATGCTGG+GGG 0.620954 4_1:-44554627 None:intergenic
TACTCCCAGGATAAAAGCCA+GGG 0.621948 4_1:-44552405 None:intergenic
TCCTTGGTTCAGCAAGCACG+AGG 0.623055 4_1:+44552845 Msa0549420:CDS
AACGAACAGATCCATCAGAT+CGG 0.624780 4_1:-44548443 None:intergenic
CTAATGATGATCCTTATGCA+GGG 0.624921 4_1:+44552815 Msa0549420:CDS
CAACCTCTAATGAGGAGGAA+GGG 0.625198 4_1:+44552121 Msa0549420:CDS
TTAGATTGCTGGAAATGCTG+GGG 0.625837 4_1:-44554628 None:intergenic
ATGGGTTGCGAATCTATCGC+CGG 0.631635 4_1:+44548408 Msa0549420:CDS
GATACTGATGACTGAAATGG+GGG 0.632647 4_1:-44554480 None:intergenic
ACTGAAGAAGGCCCACCTGT+AGG 0.634196 4_1:-44553989 None:intergenic
ACATCTGTCAGGAAATCAGA+AGG 0.635324 4_1:-44553722 None:intergenic
CAGAGAACGTTTGAGCAGTG+TGG 0.636019 4_1:-44554345 None:intergenic
ACATGTAAACAGCTTTGGGT+AGG 0.636023 4_1:+44550952 Msa0549420:CDS
GAAACAGGATCATCAAATTG+CGG 0.638436 4_1:+44554231 Msa0549420:CDS
GACGCGTAGGCAATGTGTTG+TGG 0.640431 4_1:+44558299 Msa0549420:three_prime_UTR
CTTGCAGGAAGCCTAGCACC+CGG 0.641932 4_1:-44552709 None:intergenic
TCTAATGGTGACCAGGTACA+CGG 0.642036 4_1:+44552373 Msa0549420:CDS
ATTCACAACCTCTAATGAGG+AGG 0.642098 4_1:+44552116 Msa0549420:CDS
CGCACGAACGCTAGAGACAG+AGG 0.644211 4_1:+44558331 Msa0549420:three_prime_UTR
GCTGTTAGCCAGCAACAGCA+AGG 0.645862 4_1:+44554391 Msa0549420:CDS
ATGTCGGTACAAGTTTGAGA+TGG 0.646588 4_1:-44558539 None:intergenic
AAGAAGGCCCACCTGTAGGT+GGG 0.647391 4_1:-44553985 None:intergenic
CTAATGAGGAGGAAGGGTGA+CGG 0.647467 4_1:+44552127 Msa0549420:CDS
ATATGATATGAATCCTGCAA+AGG 0.648486 4_1:+44553889 Msa0549420:CDS
TGCATGACAGGCTGATGCTG+AGG 0.648573 4_1:-44554721 None:intergenic
CACGAAAGCGTAATTGCGAG+AGG 0.651703 4_1:-44548500 None:intergenic
CAACCTGATCATATATGGCG+CGG 0.654240 4_1:+44552895 Msa0549420:CDS
GGTGCCACAGGAGGAAATGG+AGG 0.654767 4_1:-44554181 None:intergenic
TCATCGATCTGAACATTGGG+GGG 0.655238 4_1:-44552181 None:intergenic
AAGTACATCCCATGCACCAG+AGG 0.657873 4_1:-44552737 None:intergenic
AAGCCTTTCTGAGTATTGGG+GGG 0.661982 4_1:-44554514 None:intergenic
CCATCATTAGGTGCCACAGG+AGG 0.662192 4_1:-44554190 None:intergenic
TTGATCGGAGGAAGTCAACA+CGG 0.662529 4_1:-44551155 None:intergenic
GGCCATCTCCTCCTGCACAA+GGG 0.664192 4_1:+44552668 Msa0549420:CDS
TGATACTGATGACTGAAATG+GGG 0.666240 4_1:-44554481 None:intergenic
ATGATGATCCTTATGCAGGG+AGG 0.667404 4_1:+44552818 Msa0549420:CDS
GAATGGAAAACGTATCGGTG+GGG 0.669466 4_1:+44551125 Msa0549420:CDS
TATCAGCCTCCAATTCTGGG+GGG 0.672718 4_1:-44554813 None:intergenic
AAGTATACCCACCTACAGGT+GGG 0.684947 4_1:+44553978 Msa0549420:CDS
GTACACGGCAAAGACTACCC+TGG 0.688426 4_1:+44552388 Msa0549420:CDS
GCAAGCACGAGGATTACAGG+TGG 0.698180 4_1:+44552856 Msa0549420:CDS
TCTGTCAGGAAATCAGAAGG+AGG 0.700935 4_1:-44553719 None:intergenic
GAGAATAGTACACTACACAA+GGG 0.722283 4_1:+44552631 Msa0549420:CDS
ATATTCCAAGAGATTCTAAG+CGG 0.723169 4_1:+44552770 Msa0549420:CDS
AAGTTTGCACCAGTACCGAG+TGG 0.749260 4_1:+44553788 Msa0549420:CDS
TTACAACCGAATGTTGCACG+AGG 0.756011 4_1:+44553934 Msa0549420:CDS
TTGGTCCAAACATACCAGTG+CGG 0.770413 4_1:+44552554 Msa0549420:CDS
ATACTGATGACTGAAATGGG+GGG 0.791743 4_1:-44554479 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAATTATAGAAATACAT+TGG + chr4_1:44550394-44550413 Msa0549420:intron 10.0%
!! ATAACAATTAATTATTCTAA+TGG + chr4_1:44552358-44552377 Msa0549420:CDS 10.0%
!!! TCAATTTAATTTTGTAAATA+TGG + chr4_1:44553023-44553042 Msa0549420:intron 10.0%
!!! TCTTTAGAAAAAATAAAAAA+AGG - chr4_1:44553292-44553311 None:intergenic 10.0%
!!! GGAATTTTTTTTAATTTTAA+TGG + chr4_1:44556184-44556203 Msa0549420:intron 10.0%
!!! TTTTTATTTACATTGTTTTA+TGG + chr4_1:44558173-44558192 Msa0549420:intron 10.0%
!!! CATTAAATTATTTTCATATT+AGG + chr4_1:44558386-44558405 Msa0549420:three_prime_UTR 10.0%
!! ATATCTTTAGATTATAAGTT+CGG - chr4_1:44549023-44549042 None:intergenic 15.0%
!!! TTGTTTTTGTTTTGTATAAT+TGG + chr4_1:44549204-44549223 Msa0549420:intron 15.0%
!! ATGAAAATGTAATTTATTCT+AGG + chr4_1:44549705-44549724 Msa0549420:intron 15.0%
!!! AATAATGCTTTTAGTAAATA+AGG + chr4_1:44549806-44549825 Msa0549420:intron 15.0%
!! TTTAAATCATCAATAGTAAA+AGG + chr4_1:44550227-44550246 Msa0549420:intron 15.0%
!! AGGAAGTAATTAATAATATA+CGG - chr4_1:44551243-44551262 None:intergenic 15.0%
!! TCTAAATAAAAGAAATATGT+AGG + chr4_1:44553168-44553187 Msa0549420:intron 15.0%
!!! TAGGTTTTATGAATTTTATT+CGG + chr4_1:44553187-44553206 Msa0549420:intron 15.0%
!!! GAAACTATTCATATTATTTT+TGG + chr4_1:44553310-44553329 Msa0549420:intron 15.0%
!!! CATATTATTTTTGGTAAATA+AGG + chr4_1:44553319-44553338 Msa0549420:intron 15.0%
!! TACTATCGAAATATTTATTT+GGG - chr4_1:44555302-44555321 None:intergenic 15.0%
!! ATATTTATATTAATACCAGA+GGG - chr4_1:44555392-44555411 None:intergenic 15.0%
!! TATATTTATATTAATACCAG+AGG - chr4_1:44555393-44555412 None:intergenic 15.0%
!! AATTAAAAAAAATTCCAGAT+AGG - chr4_1:44556180-44556199 None:intergenic 15.0%
!! AACATAAGTTTAATATTAGA+AGG - chr4_1:44556278-44556297 None:intergenic 15.0%
!!! AATAATGCTTTAAAAATGTT+CGG + chr4_1:44556361-44556380 Msa0549420:intron 15.0%
!!! ATTTTTCTCAATTATTAGAA+CGG + chr4_1:44557440-44557459 Msa0549420:intron 15.0%
!!! ATTTTTTAACTATTATTGAC+AGG + chr4_1:44558223-44558242 Msa0549420:intron 15.0%
!!! CTTAATTTTCAATTACAATC+AGG + chr4_1:44548642-44548661 Msa0549420:intron 20.0%
!! TATCTTTAGATTATAAGTTC+GGG - chr4_1:44549022-44549041 None:intergenic 20.0%
!! GAATATTATAAATTTGCGTA+TGG - chr4_1:44549080-44549099 None:intergenic 20.0%
!!! TTTGATTGTTTATTTTGACA+CGG - chr4_1:44549433-44549452 None:intergenic 20.0%
!! GTCAAAATAAACAATCAAAT+TGG + chr4_1:44549434-44549453 Msa0549420:intron 20.0%
!! TTAGTAAATAAGGCTTATTT+AGG + chr4_1:44549816-44549835 Msa0549420:intron 20.0%
!!! AGATTTGGTATTATTATTCA+TGG - chr4_1:44550152-44550171 None:intergenic 20.0%
!!! TTTTTTTGGTTACATTTTAC+TGG - chr4_1:44550332-44550351 None:intergenic 20.0%
!! TTATGTAAAAACAACATTTG+CGG - chr4_1:44550573-44550592 None:intergenic 20.0%
!! TGTTATAATCAAGTAGAAAA+AGG - chr4_1:44550655-44550674 None:intergenic 20.0%
!! TAAATAAATTCCGTAGAAAA+AGG - chr4_1:44550691-44550710 None:intergenic 20.0%
!! ATATTATTAATTACTTCCTC+CGG + chr4_1:44551244-44551263 Msa0549420:intron 20.0%
!!! TATAATTTCAATTTGGTAAC+TGG + chr4_1:44551432-44551451 Msa0549420:intron 20.0%
!!! ATAATTTCAATTTGGTAACT+GGG + chr4_1:44551433-44551452 Msa0549420:intron 20.0%
!!! AAGCTTTTCACATTTTAAAA+TGG + chr4_1:44551538-44551557 Msa0549420:intron 20.0%
!! ACAAATGAAAAATTTCTTGA+AGG - chr4_1:44552265-44552284 None:intergenic 20.0%
!! GAATAATTAATTGTTATGTG+AGG - chr4_1:44552355-44552374 None:intergenic 20.0%
!!! TAATTTTGTAAATATGGAAG+AGG + chr4_1:44553029-44553048 Msa0549420:intron 20.0%
!! TAAAGTTGTATTGTCAAATT+TGG - chr4_1:44553690-44553709 None:intergenic 20.0%
!! ATTCAAAAGAATCAATTATG+GGG - chr4_1:44554965-44554984 None:intergenic 20.0%
!! CATTCAAAAGAATCAATTAT+GGG - chr4_1:44554966-44554985 None:intergenic 20.0%
!! TCATTCAAAAGAATCAATTA+TGG - chr4_1:44554967-44554986 None:intergenic 20.0%
!! ACTATCGAAATATTTATTTG+GGG - chr4_1:44555301-44555320 None:intergenic 20.0%
!! GTACTATCGAAATATTTATT+TGG - chr4_1:44555303-44555322 None:intergenic 20.0%
!!! TATTTTGAAATTTGAAACTC+GGG - chr4_1:44555355-44555374 None:intergenic 20.0%
!!! GTATTTTGAAATTTGAAACT+CGG - chr4_1:44555356-44555375 None:intergenic 20.0%
!!! TCCCATTATTTTTTATCAAT+AGG + chr4_1:44555658-44555677 Msa0549420:intron 20.0%
!! GCCTATTGATAAAAAATAAT+GGG - chr4_1:44555662-44555681 None:intergenic 20.0%
!! AGCCTATTGATAAAAAATAA+TGG - chr4_1:44555663-44555682 None:intergenic 20.0%
!! AAACTCATTAGGATTATATT+CGG - chr4_1:44556075-44556094 None:intergenic 20.0%
!! AAAAATGTTCGGAATTTAAT+CGG + chr4_1:44556372-44556391 Msa0549420:intron 20.0%
!! TTATCAAGTCTATTTAAACT+GGG - chr4_1:44556644-44556663 None:intergenic 20.0%
!! TTTATCAAGTCTATTTAAAC+TGG - chr4_1:44556645-44556664 None:intergenic 20.0%
!!! GATATTTTAACAAAGATAGT+TGG - chr4_1:44557108-44557127 None:intergenic 20.0%
!!! TTTTTCTCAATTATTAGAAC+GGG + chr4_1:44557441-44557460 Msa0549420:intron 20.0%
!!! GATAGAAATTCATCTTTTTA+AGG - chr4_1:44557522-44557541 None:intergenic 20.0%
!!! CTTTTTTTGGTTAAGTAATA+TGG - chr4_1:44557547-44557566 None:intergenic 20.0%
!! AACCAAAAAAAGAGAAAAAA+TGG + chr4_1:44557555-44557574 Msa0549420:intron 20.0%
!! ACCAAAAAAAGAGAAAAAAT+GGG + chr4_1:44557556-44557575 Msa0549420:intron 20.0%
!! CAAATTGTATGTTAAATACA+TGG + chr4_1:44557839-44557858 Msa0549420:intron 20.0%
!!! TATTTTCATATTAGGATCTT+TGG + chr4_1:44558394-44558413 Msa0549420:three_prime_UTR 20.0%
! ATTCATTCATTCTCTTTCTA+GGG + chr4_1:44548243-44548262 Msa0549420:five_prime_UTR 25.0%
!! ATTATTGCATTCAACGTTTT+CGG + chr4_1:44548720-44548739 Msa0549420:intron 25.0%
! GTTTGTATGGTGAATTATTA+GGG + chr4_1:44548901-44548920 Msa0549420:intron 25.0%
! ATCTTTAGATTATAAGTTCG+GGG - chr4_1:44549021-44549040 None:intergenic 25.0%
! TTTAGATCACTAATTACAAC+CGG - chr4_1:44549158-44549177 None:intergenic 25.0%
!!! GCACGATTTTGAATTTTAAT+GGG - chr4_1:44549269-44549288 None:intergenic 25.0%
!! TGCACGATTTTGAATTTTAA+TGG - chr4_1:44549270-44549289 None:intergenic 25.0%
! AAAATTCAAAATCGTGCAAT+AGG + chr4_1:44549272-44549291 Msa0549420:intron 25.0%
!! AATTGATTTCTGCATAATTC+TGG - chr4_1:44549322-44549341 None:intergenic 25.0%
!! GAATTCATTACGCATTTTAT+TGG - chr4_1:44549356-44549375 None:intergenic 25.0%
!! TTTTTCACAACATTTCATTG+AGG - chr4_1:44549644-44549663 None:intergenic 25.0%
!! AGACCAATCTTATTTGATTA+AGG + chr4_1:44549668-44549687 Msa0549420:intron 25.0%
!! GACCAATCTTATTTGATTAA+GGG + chr4_1:44549669-44549688 Msa0549420:intron 25.0%
! TTCCCTTAATCAAATAAGAT+TGG - chr4_1:44549674-44549693 None:intergenic 25.0%
!! TGTAATTTATTCTAGGAGAT+CGG + chr4_1:44549712-44549731 Msa0549420:intron 25.0%
!! TACTATTGATGATTTAAACG+TGG - chr4_1:44550225-44550244 None:intergenic 25.0%
! CTACGGAATTTATTTATTCT+TGG + chr4_1:44550695-44550714 Msa0549420:intron 25.0%
! GAAAAGAAATTCATATCTTG+AGG - chr4_1:44550724-44550743 None:intergenic 25.0%
!! TTTTGCTTCAAACTATTGAA+AGG - chr4_1:44550804-44550823 None:intergenic 25.0%
! AACAATCTGCTAATACTAAA+AGG - chr4_1:44550841-44550860 None:intergenic 25.0%
! ATTATGAATGGAAAACGTAT+CGG + chr4_1:44551120-44551139 Msa0549420:CDS 25.0%
!! CTCTTTTTGCATAATTTGAT+CGG - chr4_1:44551173-44551192 None:intergenic 25.0%
!! CAGTTTTCTCTCTTATATAT+GGG - chr4_1:44551271-44551290 None:intergenic 25.0%
! ACCAACTTTCTCTTATATAT+AGG + chr4_1:44551351-44551370 Msa0549420:intron 25.0%
! TCCTATATATAAGAGAAAGT+TGG - chr4_1:44551355-44551374 None:intergenic 25.0%
! CAGGATCTATAATTTCAATT+TGG + chr4_1:44551425-44551444 Msa0549420:intron 25.0%
!! TAATTTCAATTTGGTAACTG+GGG + chr4_1:44551434-44551453 Msa0549420:intron 25.0%
!! TCTTTGAAAATGATACATAC+TGG + chr4_1:44551463-44551482 Msa0549420:intron 25.0%
! AATCAGAAAACGAAATGTTA+GGG - chr4_1:44551794-44551813 None:intergenic 25.0%
! AAATCAGAAAACGAAATGTT+AGG - chr4_1:44551795-44551814 None:intergenic 25.0%
! ATTCTTATTCTGGACAAAAA+AGG + chr4_1:44551873-44551892 Msa0549420:CDS 25.0%
! TTGTTCTTCATTGTATCATT+AGG + chr4_1:44553242-44553261 Msa0549420:intron 25.0%
!! TTTTCTCCAATATAAGTGAT+TGG + chr4_1:44553363-44553382 Msa0549420:intron 25.0%
!!! TTTTCAAGGAAAAAGCAAAT+GGG - chr4_1:44553410-44553429 None:intergenic 25.0%
! TGACAATACAACTTTATTCT+TGG + chr4_1:44553694-44553713 Msa0549420:CDS 25.0%
! GATAAGGCAATAGAATTATT+GGG - chr4_1:44554679-44554698 None:intergenic 25.0%
! AGATAAGGCAATAGAATTAT+TGG - chr4_1:44554680-44554699 None:intergenic 25.0%
! TTGGGAGAAGAATATAAATA+TGG - chr4_1:44555031-44555050 None:intergenic 25.0%
! TGACATGTAAACATATACTT+GGG + chr4_1:44555127-44555146 Msa0549420:intron 25.0%
!!! ATTGCTTAATTTGTCTTTGT+AGG - chr4_1:44555179-44555198 None:intergenic 25.0%
! GCAATGTAAACAATTAGATT+TGG + chr4_1:44555194-44555213 Msa0549420:intron 25.0%
!! TGTAAACAATTAGATTTGGT+AGG + chr4_1:44555198-44555217 Msa0549420:intron 25.0%
!!! TCTTTAGAAGGTAGTTTTTA+GGG + chr4_1:44555706-44555725 Msa0549420:intron 25.0%
! TGGAAACATAGAAAAATTAG+CGG - chr4_1:44555954-44555973 None:intergenic 25.0%
! TATCGGAGTAAAAATAACTA+TGG - chr4_1:44555974-44555993 None:intergenic 25.0%
!! TTTTACTCCGATAATTACTT+AGG + chr4_1:44555981-44556000 Msa0549420:intron 25.0%
! TTTACTCCGATAATTACTTA+GGG + chr4_1:44555982-44556001 Msa0549420:intron 25.0%
! AAAAAATCTCTAAACCAAGT+TGG - chr4_1:44556099-44556118 None:intergenic 25.0%
! GTTCGTAGTTTAAAAATAAC+TGG - chr4_1:44556131-44556150 None:intergenic 25.0%
!!! GTTATTTTTAAACTACGAAC+AGG + chr4_1:44556131-44556150 Msa0549420:intron 25.0%
! GTTTAATATTAGAAGGTAAG+AGG - chr4_1:44556271-44556290 None:intergenic 25.0%
! ATTAACATGAGGTAATTGAA+AGG - chr4_1:44556774-44556793 None:intergenic 25.0%
!!! CGTTTTTTGTAACAGTAATA+TGG + chr4_1:44556833-44556852 Msa0549420:intron 25.0%
!!! AACTTTAATTTGTAACGTTG+TGG + chr4_1:44557061-44557080 Msa0549420:intron 25.0%
!!! TATTAAAAGCGTGTTTTGTT+TGG + chr4_1:44557158-44557177 Msa0549420:intron 25.0%
! AGAACGAAATAGAAAATCTT+TGG - chr4_1:44557399-44557418 None:intergenic 25.0%
!!! CTTTTTAAGGTAAATAGTTG+AGG - chr4_1:44557509-44557528 None:intergenic 25.0%
!!! TTTTTGGTTAAGTAATATGG+CGG - chr4_1:44557544-44557563 None:intergenic 25.0%
!!! ACCCATTTTTTCTCTTTTTT+TGG - chr4_1:44557560-44557579 None:intergenic 25.0%
!! TAATCTTTTCATTACTAGTC+TGG + chr4_1:44557619-44557638 Msa0549420:intron 25.0%
! TTGTATGTTAAATACATGGT+TGG + chr4_1:44557843-44557862 Msa0549420:intron 25.0%
!! TAAATACATGGTTGGTATTA+TGG + chr4_1:44557851-44557870 Msa0549420:intron 25.0%
!! TTTTGCAAAAGTGAAAATGA+CGG + chr4_1:44557905-44557924 Msa0549420:intron 25.0%
! CATTTGAGAGTCAAAATAAA+CGG - chr4_1:44558279-44558298 None:intergenic 25.0%
! CTACAAGCTATAAAATTGTA+AGG + chr4_1:44558449-44558468 Msa0549420:three_prime_UTR 25.0%
!!! TTTTGACTCAATTGTAATGT+TGG + chr4_1:44558476-44558495 Msa0549420:three_prime_UTR 25.0%
GAATGAATGTTATGTTGTGA+GGG - chr4_1:44548231-44548250 None:intergenic 30.0%
TGAATGAATGTTATGTTGTG+AGG - chr4_1:44548232-44548251 None:intergenic 30.0%
CATTCATTCATTCTCTTTCT+AGG + chr4_1:44548242-44548261 Msa0549420:five_prime_UTR 30.0%
! TCTAGCAAACTCAATTTTCA+AGG - chr4_1:44548596-44548615 None:intergenic 30.0%
! TTCATCGATTAAGCAAAGTA+CGG - chr4_1:44548852-44548871 None:intergenic 30.0%
GGTTTGTATGGTGAATTATT+AGG + chr4_1:44548900-44548919 Msa0549420:intron 30.0%
GTGAATTATTAGGGTATGTT+TGG + chr4_1:44548910-44548929 Msa0549420:intron 30.0%
TTTAGATTTGTGAAAGTTGC+TGG + chr4_1:44549127-44549146 Msa0549420:intron 30.0%
GTGAAAGAATTCGAGAATTA+AGG - chr4_1:44549298-44549317 None:intergenic 30.0%
ACAATCATGAACGTTGTAAT+TGG + chr4_1:44549376-44549395 Msa0549420:intron 30.0%
! ACTGTGTTTAAAATAATCGC+AGG + chr4_1:44549539-44549558 Msa0549420:intron 30.0%
! CTGTGTTTAAAATAATCGCA+GGG + chr4_1:44549540-44549559 Msa0549420:intron 30.0%
!!! CTTGGTTTAATCCAGTTTTT+TGG - chr4_1:44549616-44549635 None:intergenic 30.0%
!!! TTACGAAAGAGTACTTTTTG+AGG + chr4_1:44549863-44549882 Msa0549420:intron 30.0%
!!! AGGACTAGGATTAGTTTTAA+CGG - chr4_1:44550058-44550077 None:intergenic 30.0%
ATTACATCATTAGAAGGACT+AGG - chr4_1:44550072-44550091 None:intergenic 30.0%
GTCTCTTATAATTACTAGTC+AGG - chr4_1:44550184-44550203 None:intergenic 30.0%
GTGGCTATAAAAAGAAAATG+GGG - chr4_1:44550206-44550225 None:intergenic 30.0%
CGTGGCTATAAAAAGAAAAT+GGG - chr4_1:44550207-44550226 None:intergenic 30.0%
ACGTGGCTATAAAAAGAAAA+TGG - chr4_1:44550208-44550227 None:intergenic 30.0%
!!! ATAGTAAAAGGTGCCTTTTT+TGG + chr4_1:44550239-44550258 Msa0549420:intron 30.0%
!! GAATGATTCTAAGTCTTGTT+CGG - chr4_1:44550268-44550287 None:intergenic 30.0%
ACAAGACTTAGAATCATTCA+TGG + chr4_1:44550269-44550288 Msa0549420:intron 30.0%
AGAAATACATTGGACATAGT+CGG + chr4_1:44550404-44550423 Msa0549420:intron 30.0%
!!! GGATTCTAGTTCTTAAGTTT+TGG + chr4_1:44550440-44550459 Msa0549420:intron 30.0%
!!! TGTTGCTTTTCAAATTTCTG+CGG + chr4_1:44550501-44550520 Msa0549420:intron 30.0%
! GCAATTATAGCCTTTTTCTA+CGG + chr4_1:44550678-44550697 Msa0549420:intron 30.0%
AAGAAATTCATATCTTGAGG+TGG - chr4_1:44550721-44550740 None:intergenic 30.0%
TTGACTGTTAAATCCAAAGT+AGG + chr4_1:44550750-44550769 Msa0549420:intron 30.0%
TGTCAAAATTAAGAAGTGGT+TGG + chr4_1:44550776-44550795 Msa0549420:intron 30.0%
AAAGACATGTAAACAGCTTT+GGG + chr4_1:44550948-44550967 Msa0549420:CDS 30.0%
CCTCAACTTTACCAAATTTA+CGG - chr4_1:44551023-44551042 None:intergenic 30.0%
CAATTTAGATGATGCTATTC+AGG + chr4_1:44551089-44551108 Msa0549420:CDS 30.0%
CAGGCAATGAAAATTATGAA+TGG + chr4_1:44551108-44551127 Msa0549420:CDS 30.0%
! TTTTTGCATAATTTGATCGG+AGG - chr4_1:44551170-44551189 None:intergenic 30.0%
! CCAGTTTTCTCTCTTATATA+TGG - chr4_1:44551272-44551291 None:intergenic 30.0%
CCATATATAAGAGAGAAAAC+TGG + chr4_1:44551269-44551288 Msa0549420:intron 30.0%
TCAACAAAAATTGATGTACC+TGG + chr4_1:44551293-44551312 Msa0549420:intron 30.0%
! GATGTACCTGGTTTAAAATT+TGG + chr4_1:44551305-44551324 Msa0549420:intron 30.0%
CTTTCTCTTATATATAGGAC+CGG + chr4_1:44551356-44551375 Msa0549420:intron 30.0%
AATGTGAAAAGCTTCACAAA+AGG - chr4_1:44551532-44551551 None:intergenic 30.0%
!!! TCACATTTTAAAATGGACCT+TGG + chr4_1:44551545-44551564 Msa0549420:intron 30.0%
ATTGTAAGGTTTGTCTGATT+TGG + chr4_1:44551576-44551595 Msa0549420:intron 30.0%
AAACATCGACGAAAAGTAAT+TGG - chr4_1:44551638-44551657 None:intergenic 30.0%
! CGTCGATGTTTTATAGAAAT+TGG + chr4_1:44551647-44551666 Msa0549420:intron 30.0%
! CGATGTTTTATAGAAATTGG+TGG + chr4_1:44551650-44551669 Msa0549420:intron 30.0%
! CATGAAAGAAACAACTTGTT+CGG - chr4_1:44551738-44551757 None:intergenic 30.0%
!!! TCATGTTATTTTTGCTCTTC+TGG + chr4_1:44551753-44551772 Msa0549420:intron 30.0%
ATCAGAAAACGAAATGTTAG+GGG - chr4_1:44551793-44551812 None:intergenic 30.0%
! TTTCGTTTTCTGATTTCTGT+AGG + chr4_1:44551799-44551818 Msa0549420:intron 30.0%
AATTTCAAGGCAAAAGCTTT+GGG + chr4_1:44551843-44551862 Msa0549420:CDS 30.0%
ACATCAGCCAATATACAAAT+AGG - chr4_1:44552028-44552047 None:intergenic 30.0%
! GTCAACCCAATAATATTTTG+TGG + chr4_1:44552149-44552168 Msa0549420:CDS 30.0%
CCGATCCACAAAATATTATT+GGG - chr4_1:44552157-44552176 None:intergenic 30.0%
! CCCAATAATATTTTGTGGAT+CGG + chr4_1:44552154-44552173 Msa0549420:CDS 30.0%
ACCGATCCACAAAATATTAT+TGG - chr4_1:44552158-44552177 None:intergenic 30.0%
AATTTCACCAAAAAGGATCA+TGG - chr4_1:44552224-44552243 None:intergenic 30.0%
TTCTCTCAATTTCACCAAAA+AGG - chr4_1:44552231-44552250 None:intergenic 30.0%
TTATGTGAGGATCATTGAAA+AGG - chr4_1:44552342-44552361 None:intergenic 30.0%
TAATTATTCTAATGGTGACC+AGG + chr4_1:44552366-44552385 Msa0549420:CDS 30.0%
TTTAGGAATAAATCAGGTCT+TGG - chr4_1:44552436-44552455 None:intergenic 30.0%
TGCTCATTTAGGAATAAATC+AGG - chr4_1:44552442-44552461 None:intergenic 30.0%
AATTGTCCAGGAAAACTATT+CGG - chr4_1:44552517-44552536 None:intergenic 30.0%
TACTATTCTCGTTAAACTCA+GGG - chr4_1:44552621-44552640 None:intergenic 30.0%
ATATTCCAAGAGATTCTAAG+CGG + chr4_1:44552770-44552789 Msa0549420:CDS 30.0%
! AGTAACTTTTCCAGCAAATA+GGG - chr4_1:44553111-44553130 None:intergenic 30.0%
! AAGTAACTTTTCCAGCAAAT+AGG - chr4_1:44553112-44553131 None:intergenic 30.0%
GAAAAGTTACTTGTAGCAAA+TGG + chr4_1:44553120-44553139 Msa0549420:intron 30.0%
!! GTTTTCAAGGAAAAAGCAAA+TGG - chr4_1:44553411-44553430 None:intergenic 30.0%
! CCAAAATCATTTTCACTATC+AGG - chr4_1:44553614-44553633 None:intergenic 30.0%
!! CCTGATAGTGAAAATGATTT+TGG + chr4_1:44553611-44553630 Msa0549420:CDS 30.0%
!! ATATATTGATTTGACGGTAC+AGG - chr4_1:44553842-44553861 None:intergenic 30.0%
!! TGCTGCATATATTGATTTGA+CGG - chr4_1:44553848-44553867 None:intergenic 30.0%
ATATGATATGAATCCTGCAA+AGG + chr4_1:44553889-44553908 Msa0549420:CDS 30.0%
ATGGAAACCAATCTCAATTA+TGG + chr4_1:44554209-44554228 Msa0549420:CDS 30.0%
! CTCTGTTTTATACAATTCTC+AGG + chr4_1:44554552-44554571 Msa0549420:CDS 30.0%
! AAAGGATGGTGGTTATTATT+AGG - chr4_1:44554589-44554608 None:intergenic 30.0%
! TTATTATTAGGTTGCTGGAA+AGG - chr4_1:44554577-44554596 None:intergenic 30.0%
! ACTGTTAACTTGACTAGATA+AGG - chr4_1:44554695-44554714 None:intergenic 30.0%
AATTCTTATTGTTGAACTCC+TGG - chr4_1:44554925-44554944 None:intergenic 30.0%
! AACCACAAAGTGAACTTTTT+GGG - chr4_1:44555049-44555068 None:intergenic 30.0%
! TAACCACAAAGTGAACTTTT+TGG - chr4_1:44555050-44555069 None:intergenic 30.0%
GTGACATGTAAACATATACT+TGG + chr4_1:44555126-44555145 Msa0549420:intron 30.0%
! ATTTATTTGGGGAAAAGTAC+AGG - chr4_1:44555290-44555309 None:intergenic 30.0%
!! GTTGACAACAGTTTTAACAA+GGG - chr4_1:44555328-44555347 None:intergenic 30.0%
ACTAACTATTAAAATCCCTC+TGG + chr4_1:44555374-44555393 Msa0549420:intron 30.0%
!! TAGTTGTCTTATAGTTCTGA+TGG + chr4_1:44555411-44555430 Msa0549420:intron 30.0%
TGACAAATAAGTAGGTGTAT+GGG - chr4_1:44555450-44555469 None:intergenic 30.0%
! CTTTTTCTTTCCTCTTTAGA+AGG + chr4_1:44555694-44555713 Msa0549420:intron 30.0%
! CTAAAAACTACCTTCTAAAG+AGG - chr4_1:44555707-44555726 None:intergenic 30.0%
!! CTCTTTAGAAGGTAGTTTTT+AGG + chr4_1:44555705-44555724 Msa0549420:intron 30.0%
TCACAGTAAAATAAGTTCAG+GGG - chr4_1:44555748-44555767 None:intergenic 30.0%
CTCACAGTAAAATAAGTTCA+GGG - chr4_1:44555749-44555768 None:intergenic 30.0%
!!! CTGAACTTATTTTACTGTGA+GGG + chr4_1:44555748-44555767 Msa0549420:intron 30.0%
!!! TGAACTTATTTTACTGTGAG+GGG + chr4_1:44555749-44555768 Msa0549420:intron 30.0%
GAAACATAGAAAAATTAGCG+GGG - chr4_1:44555952-44555971 None:intergenic 30.0%
GGAAACATAGAAAAATTAGC+GGG - chr4_1:44555953-44555972 None:intergenic 30.0%
TTACTCCGATAATTACTTAG+GGG + chr4_1:44555983-44556002 Msa0549420:intron 30.0%
TTCAACCCCTAAGTAATTAT+CGG - chr4_1:44555991-44556010 None:intergenic 30.0%
ATAATTACTTAGGGGTTGAA+AGG + chr4_1:44555991-44556010 Msa0549420:intron 30.0%
! AGAAATCTTTTAGTCCTATC+TGG + chr4_1:44556163-44556182 Msa0549420:intron 30.0%
ATGCAAACAAATGATATCCA+GGG - chr4_1:44556336-44556355 None:intergenic 30.0%
AATGCAAACAAATGATATCC+AGG - chr4_1:44556337-44556356 None:intergenic 30.0%
TTGAATTGAATGTGCTTTCA+TGG + chr4_1:44556409-44556428 Msa0549420:intron 30.0%
AAATAGAGCAAGAACAACAT+AGG + chr4_1:44556475-44556494 Msa0549420:intron 30.0%
ACAAACATGGAATTAACATG+AGG - chr4_1:44556785-44556804 None:intergenic 30.0%
TTACAAAAAACGAGTGTCTA+GGG - chr4_1:44556825-44556844 None:intergenic 30.0%
AGAGATACTTAGCATATGTT+TGG - chr4_1:44556889-44556908 None:intergenic 30.0%
GCAAGATTACTTTCAATCAA+TGG - chr4_1:44556970-44556989 None:intergenic 30.0%
TTTACAGAATTTAGTGCTTC+TGG + chr4_1:44557226-44557245 Msa0549420:intron 30.0%
TTACAGAATTTAGTGCTTCT+GGG + chr4_1:44557227-44557246 Msa0549420:intron 30.0%
TAGTCTGGTATATATGCTAA+GGG + chr4_1:44557634-44557653 Msa0549420:intron 30.0%
!! TCAATAAAACTTGCTATTCG+TGG + chr4_1:44557755-44557774 Msa0549420:intron 30.0%
TTCGTGGAATCATTAAATTG+TGG + chr4_1:44557771-44557790 Msa0549420:intron 30.0%
GAGTAACATTGTTTATCGTA+TGG + chr4_1:44557995-44558014 Msa0549420:intron 30.0%
AACATTGTTTATCGTATGGT+TGG + chr4_1:44557999-44558018 Msa0549420:intron 30.0%
ACATTGTTTATCGTATGGTT+GGG + chr4_1:44558000-44558019 Msa0549420:intron 30.0%
AATATACGTTGGTCATTACT+TGG - chr4_1:44558056-44558075 None:intergenic 30.0%
AATGACCAACGTATATTTCA+CGG + chr4_1:44558059-44558078 Msa0549420:intron 30.0%
!!! CGTTTATTTTGACTCTCAAA+TGG + chr4_1:44558277-44558296 Msa0549420:three_prime_UTR 30.0%
GAGATTGAGGGTGAAAATTT+AGG - chr4_1:44548282-44548301 None:intergenic 35.0%
ATGGATCTGTTCGTTCAATA+CGG + chr4_1:44548451-44548470 Msa0549420:CDS 35.0%
!! GAAAATTGAGTTTGCTAGAC+CGG + chr4_1:44548597-44548616 Msa0549420:CDS 35.0%
AATTTGCCTACGAAATTGCT+TGG + chr4_1:44548772-44548791 Msa0549420:intron 35.0%
! TGAAGTGTCATGATTGGATT+GGG + chr4_1:44548933-44548952 Msa0549420:intron 35.0%
ATTACTGCTTTGCAGATGTT+TGG - chr4_1:44549498-44549517 None:intergenic 35.0%
! GTTTAAAATAATCGCAGGGA+CGG + chr4_1:44549544-44549563 Msa0549420:intron 35.0%
TTAGTTGCCATAAATTGCGT+AGG + chr4_1:44549573-44549592 Msa0549420:intron 35.0%
TAGTTGCCATAAATTGCGTA+GGG + chr4_1:44549574-44549593 Msa0549420:intron 35.0%
TGTTTACCCTACGCAATTTA+TGG - chr4_1:44549583-44549602 None:intergenic 35.0%
AGTGTTTAACGCCAAAAAAC+TGG + chr4_1:44549602-44549621 Msa0549420:intron 35.0%
CATTTCATTGAGGCAATACT+TGG - chr4_1:44549634-44549653 None:intergenic 35.0%
AAACTGCATCTTATCTGATG+TGG + chr4_1:44549891-44549910 Msa0549420:intron 35.0%
TCTCTAAATAATTTCCCGTC+TGG + chr4_1:44549937-44549956 Msa0549420:intron 35.0%
!!! TAGTTTTAACGGTGGTAACA+GGG - chr4_1:44550047-44550066 None:intergenic 35.0%
!!! TTAGTTTTAACGGTGGTAAC+AGG - chr4_1:44550048-44550067 None:intergenic 35.0%
!!! ACTAGGATTAGTTTTAACGG+TGG - chr4_1:44550055-44550074 None:intergenic 35.0%
CGTTGCATTACATCATTAGA+AGG - chr4_1:44550078-44550097 None:intergenic 35.0%
!! GTCAGGTTGCTATTTAGATT+TGG - chr4_1:44550167-44550186 None:intergenic 35.0%
TCTTGTTCGGAAACCAAAAA+AGG - chr4_1:44550255-44550274 None:intergenic 35.0%
! GTTACATTTTACTGGTAGTC+TGG - chr4_1:44550324-44550343 None:intergenic 35.0%
!!! GTTGCTTTTCAAATTTCTGC+GGG + chr4_1:44550502-44550521 Msa0549420:intron 35.0%
!! TTGCTTTTCAAATTTCTGCG+GGG + chr4_1:44550503-44550522 Msa0549420:intron 35.0%
AAAAACAACATTTGCGGTAC+AGG - chr4_1:44550567-44550586 None:intergenic 35.0%
!! TTACGCGTTTGATAGTGTAA+AGG - chr4_1:44550604-44550623 None:intergenic 35.0%
!! AATTTTGACAGCTCCTACTT+TGG - chr4_1:44550766-44550785 None:intergenic 35.0%
GAGCTGTCAAAATTAAGAAG+TGG + chr4_1:44550772-44550791 Msa0549420:intron 35.0%
!! CCTGGAAATAACGTCATTTT+TGG - chr4_1:44550927-44550946 None:intergenic 35.0%
! CCAAAAATGACGTTATTTCC+AGG + chr4_1:44550924-44550943 Msa0549420:intron 35.0%
CAAAGACATGTAAACAGCTT+TGG + chr4_1:44550947-44550966 Msa0549420:CDS 35.0%
CCGTAAATTTGGTAAAGTTG+AGG + chr4_1:44551020-44551039 Msa0549420:CDS 35.0%
TTCTCTCTTATATATGGGAC+CGG - chr4_1:44551266-44551285 None:intergenic 35.0%
! TCTGGTCCAAATTTTAAACC+AGG - chr4_1:44551314-44551333 None:intergenic 35.0%
!! TCAACAAAAGTTGATGCATC+TGG - chr4_1:44551332-44551351 None:intergenic 35.0%
CAATAAGCAACTACTTCATC+CGG - chr4_1:44551378-44551397 None:intergenic 35.0%
CCTTACAATAAAAGCAACCA+AGG - chr4_1:44551565-44551584 None:intergenic 35.0%
!!! CCTTGGTTGCTTTTATTGTA+AGG + chr4_1:44551562-44551581 Msa0549420:intron 35.0%
!!! TGATTTGGTCAGTAGTGTTT+TGG + chr4_1:44551591-44551610 Msa0549420:intron 35.0%
!! AAATTGGTGGATTCTGTGTT+AGG + chr4_1:44551663-44551682 Msa0549420:intron 35.0%
TCACACTAATGTCAGAGAAT+CGG - chr4_1:44551691-44551710 None:intergenic 35.0%
TTCTGATTTCTGTAGGATCA+AGG + chr4_1:44551806-44551825 Msa0549420:intron 35.0%
TCTGATTTCTGTAGGATCAA+GGG + chr4_1:44551807-44551826 Msa0549420:intron 35.0%
CATGATTATGGGCAATTTCA+AGG + chr4_1:44551830-44551849 Msa0549420:CDS 35.0%
CAATTTCAAGGCAAAAGCTT+TGG + chr4_1:44551842-44551861 Msa0549420:CDS 35.0%
TGTCCAGAATAAGAATCAGA+AGG - chr4_1:44551869-44551888 None:intergenic 35.0%
CTGTACAATGTGCATCTAAT+TGG + chr4_1:44551911-44551930 Msa0549420:intron 35.0%
GGCAATGACAAAAGATGAAA+AGG - chr4_1:44551948-44551967 None:intergenic 35.0%
! ATCTTTTGTCATTGCCTTGT+TGG + chr4_1:44551952-44551971 Msa0549420:intron 35.0%
CTTGTTGGATGTAATGTGTT+GGG + chr4_1:44551967-44551986 Msa0549420:intron 35.0%
ATGCAAGTCTTAACAGTGTA+TGG - chr4_1:44552002-44552021 None:intergenic 35.0%
GCATGCACCTATTTGTATAT+TGG + chr4_1:44552018-44552037 Msa0549420:intron 35.0%
AGAATTCACAACCTCTAATG+AGG + chr4_1:44552113-44552132 Msa0549420:intron 35.0%
CCAAATAAATCCATTTGTGC+AGG - chr4_1:44552475-44552494 None:intergenic 35.0%
! CCTGCACAAATGGATTTATT+TGG + chr4_1:44552472-44552491 Msa0549420:CDS 35.0%
GGAAAACTATTCGGAATCAT+AGG - chr4_1:44552508-44552527 None:intergenic 35.0%
! ATGATTCCGAATAGTTTTCC+TGG + chr4_1:44552508-44552527 Msa0549420:CDS 35.0%
GTACTATTCTCGTTAAACTC+AGG - chr4_1:44552622-44552641 None:intergenic 35.0%
GAGAATAGTACACTACACAA+GGG + chr4_1:44552631-44552650 Msa0549420:CDS 35.0%
CTAATGATGATCCTTATGCA+GGG + chr4_1:44552815-44552834 Msa0549420:CDS 35.0%
GTCGGCAGAAATAAACTTAT+TGG - chr4_1:44553064-44553083 None:intergenic 35.0%
GAAAAAAAGACAGAGCTTGT+GGG - chr4_1:44553348-44553367 None:intergenic 35.0%
AGAAAAAAAGACAGAGCTTG+TGG - chr4_1:44553349-44553368 None:intergenic 35.0%
TAAGGGCCAATCACTTATAT+TGG - chr4_1:44553372-44553391 None:intergenic 35.0%
! GCTATGTAAGACAGTTTTCA+AGG - chr4_1:44553424-44553443 None:intergenic 35.0%
CAAAATGTATACCTGTCTCA+AGG + chr4_1:44553447-44553466 Msa0549420:intron 35.0%
AAATGTGATGATTGGTGCAT+GGG - chr4_1:44553818-44553837 None:intergenic 35.0%
ATATCATATTCAGCCTGTGA+AGG - chr4_1:44553878-44553897 None:intergenic 35.0%
!! TGAGATTGGTTTCCATCATT+AGG - chr4_1:44554205-44554224 None:intergenic 35.0%
CCTGTTTCCATAATTGAGAT+TGG - chr4_1:44554219-44554238 None:intergenic 35.0%
CCAATCTCAATTATGGAAAC+AGG + chr4_1:44554216-44554235 Msa0549420:CDS 35.0%
GAAACAGGATCATCAAATTG+CGG + chr4_1:44554231-44554250 Msa0549420:CDS 35.0%
ATATTCCTAAACTGCTGAGA+TGG - chr4_1:44554271-44554290 None:intergenic 35.0%
TGATACTGATGACTGAAATG+GGG - chr4_1:44554484-44554503 None:intergenic 35.0%
CTGATACTGATGACTGAAAT+GGG - chr4_1:44554485-44554504 None:intergenic 35.0%
AAATGCTGGGGGTTATTATT+AGG - chr4_1:44554619-44554638 None:intergenic 35.0%
ATTAGATTGCTGGAAATGCT+GGG - chr4_1:44554632-44554651 None:intergenic 35.0%
TATTAGATTGCTGGAAATGC+TGG - chr4_1:44554633-44554652 None:intergenic 35.0%
! CAATAGAATTATTGGGTTGC+TGG - chr4_1:44554672-44554691 None:intergenic 35.0%
! CTGTATTTGGAGTAGAAGAT+TGG - chr4_1:44554875-44554894 None:intergenic 35.0%
TTACACTAGCAAGTGTATCA+AGG - chr4_1:44555077-44555096 None:intergenic 35.0%
TTGCTAGTGTAAATGATCTG+CGG + chr4_1:44555085-44555104 Msa0549420:intron 35.0%
!! GGTTGACAACAGTTTTAACA+AGG - chr4_1:44555329-44555348 None:intergenic 35.0%
! TGAAATTTGAAACTCGGGTA+AGG - chr4_1:44555350-44555369 None:intergenic 35.0%
GTGACAAATAAGTAGGTGTA+TGG - chr4_1:44555451-44555470 None:intergenic 35.0%
AGAGCATGTGACAAATAAGT+AGG - chr4_1:44555458-44555477 None:intergenic 35.0%
TCAAACACATTCAATCCAGA+AGG - chr4_1:44555542-44555561 None:intergenic 35.0%
GCAATATTGTGACAAACTCT+TGG + chr4_1:44555568-44555587 Msa0549420:intron 35.0%
!!! TAGAAGGTAGTTTTTAGGGT+TGG + chr4_1:44555710-44555729 Msa0549420:intron 35.0%
CACAGTAAAATAAGTTCAGG+GGG - chr4_1:44555747-44555766 None:intergenic 35.0%
CCTCACAGTAAAATAAGTTC+AGG - chr4_1:44555750-44555769 None:intergenic 35.0%
!!! CCTGAACTTATTTTACTGTG+AGG + chr4_1:44555747-44555766 Msa0549420:intron 35.0%
!! GGGGTTATTTTCACTATGTA+AGG + chr4_1:44555768-44555787 Msa0549420:intron 35.0%
TTCCCATCTAACCATAACTA+GGG + chr4_1:44555874-44555893 Msa0549420:intron 35.0%
ATCCCTAGTTATGGTTAGAT+GGG - chr4_1:44555879-44555898 None:intergenic 35.0%
AATCCCTAGTTATGGTTAGA+TGG - chr4_1:44555880-44555899 None:intergenic 35.0%
GAATGTGGTACCAAATTTGT+TGG - chr4_1:44555919-44555938 None:intergenic 35.0%
GGAGTTGCTAAAATATCAGT+GGG - chr4_1:44556054-44556073 None:intergenic 35.0%
! TCCTAATGAGTTTTCCAACT+TGG + chr4_1:44556082-44556101 Msa0549420:intron 35.0%
! ACCAAGTTGGAAAACTCATT+AGG - chr4_1:44556086-44556105 None:intergenic 35.0%
ACATTTCAACAAAACTCACG+TGG + chr4_1:44556207-44556226 Msa0549420:intron 35.0%
ATTATTGCAATCTGTGTCTC+TGG + chr4_1:44556238-44556257 Msa0549420:intron 35.0%
TGCAAACAAATGATATCCAG+GGG - chr4_1:44556335-44556354 None:intergenic 35.0%
CTCATTAAACAAAGCCATCA+GGG - chr4_1:44556444-44556463 None:intergenic 35.0%
TCTCATTAAACAAAGCCATC+AGG - chr4_1:44556445-44556464 None:intergenic 35.0%
!! TGGCTTTGTTTAATGAGACA+TGG + chr4_1:44556447-44556466 Msa0549420:intron 35.0%
!! GGCTTTGTTTAATGAGACAT+GGG + chr4_1:44556448-44556467 Msa0549420:intron 35.0%
AAGAACAACATAGGTCTAGT+TGG + chr4_1:44556484-44556503 Msa0549420:intron 35.0%
! ACTGGGTGTTAATTTTCACA+CGG - chr4_1:44556627-44556646 None:intergenic 35.0%
AGTGAATGACAACAAACATG+AGG - chr4_1:44556751-44556770 None:intergenic 35.0%
TACAAAAAACGAGTGTCTAG+GGG - chr4_1:44556824-44556843 None:intergenic 35.0%
GTTACAAAAAACGAGTGTCT+AGG - chr4_1:44556826-44556845 None:intergenic 35.0%
! ATGCTAAGTATCTCTAGTTC+AGG + chr4_1:44556894-44556913 Msa0549420:intron 35.0%
! TGCTAAGTATCTCTAGTTCA+GGG + chr4_1:44556895-44556914 Msa0549420:intron 35.0%
!!! TTTTTTTATTCGAGACGTGC+CGG + chr4_1:44557004-44557023 Msa0549420:intron 35.0%
ACAAAGATAGTTGGATCTAG+CGG - chr4_1:44557099-44557118 None:intergenic 35.0%
!! ATTTCTGAAGTACGGTACTA+TGG - chr4_1:44557198-44557217 None:intergenic 35.0%
!! CCTTGTTCATTTCTGAAGTA+CGG - chr4_1:44557206-44557225 None:intergenic 35.0%
CTACTTGATTAAGGAGAGTT+TGG - chr4_1:44557297-44557316 None:intergenic 35.0%
ATCACTGAGCTACTTGATTA+AGG - chr4_1:44557306-44557325 None:intergenic 35.0%
CATAATATATGTGAGGGGAT+CGG + chr4_1:44557466-44557485 Msa0549420:intron 35.0%
ATAATATATGTGAGGGGATC+GGG + chr4_1:44557467-44557486 Msa0549420:intron 35.0%
CTAGTCTGGTATATATGCTA+AGG + chr4_1:44557633-44557652 Msa0549420:intron 35.0%
ATGACTCAACGTGATTTCAA+CGG - chr4_1:44557880-44557899 None:intergenic 35.0%
! ACTATGTCGTTGATGCATTT+TGG + chr4_1:44557973-44557992 Msa0549420:intron 35.0%
CATTGTTTATCGTATGGTTG+GGG + chr4_1:44558001-44558020 Msa0549420:intron 35.0%
ATTGTTTATCGTATGGTTGG+GGG + chr4_1:44558002-44558021 Msa0549420:intron 35.0%
TATGTCCGTGAAATATACGT+TGG - chr4_1:44558067-44558086 None:intergenic 35.0%
ATTTGAAAAGGTGGTGCTCT+GGG - chr4_1:44548322-44548341 None:intergenic 40.0%
AACGAACAGATCCATCAGAT+CGG - chr4_1:44548446-44548465 None:intergenic 40.0%
! CTTCAGGGATTCAATTTTCG+TGG + chr4_1:44548565-44548584 Msa0549420:CDS 40.0%
TTCATGCCAAGCAATTTCGT+AGG - chr4_1:44548781-44548800 None:intergenic 40.0%
! GCATGTACAACGAGTTTTCA+AGG - chr4_1:44548876-44548895 None:intergenic 40.0%
AAACTCGTTGTACATGCGAT+TGG + chr4_1:44548879-44548898 Msa0549420:intron 40.0%
!! GTACATGCGATTGGTTTGTA+TGG + chr4_1:44548888-44548907 Msa0549420:intron 40.0%
! GTTTGGTGAAGTGTCATGAT+TGG + chr4_1:44548927-44548946 Msa0549420:intron 40.0%
! GTGAAGTGTCATGATTGGAT+TGG + chr4_1:44548932-44548951 Msa0549420:intron 40.0%
TTATAAGTTCGGGGTGTGTT+TGG - chr4_1:44549012-44549031 None:intergenic 40.0%
GAGAAGAAAATGCAGAGCAT+AGG + chr4_1:44549782-44549801 Msa0549420:intron 40.0%
TATCTGATGTGGATACAACC+AGG + chr4_1:44549902-44549921 Msa0549420:intron 40.0%
ATCTGATGTGGATACAACCA+GGG + chr4_1:44549903-44549922 Msa0549420:intron 40.0%
TAGAGATAAATGTAGTCCCC+TGG - chr4_1:44549923-44549942 None:intergenic 40.0%
AGATGTAGTACAGTACCAGA+CGG - chr4_1:44549955-44549974 None:intergenic 40.0%
TTCCAGATAACATGCGTTTC+TGG + chr4_1:44550006-44550025 Msa0549420:intron 40.0%
TCCAGATAACATGCGTTTCT+GGG + chr4_1:44550007-44550026 Msa0549420:intron 40.0%
ATAGTCGGTCGTTCAAACAA+GGG + chr4_1:44550419-44550438 Msa0549420:intron 40.0%
! TGCTTTTCAAATTTCTGCGG+GGG + chr4_1:44550504-44550523 Msa0549420:intron 40.0%
!! ACATGTAAACAGCTTTGGGT+AGG + chr4_1:44550952-44550971 Msa0549420:CDS 40.0%
AGTCTTCCTTTGTTACAGCT+GGG - chr4_1:44550987-44551006 None:intergenic 40.0%
AAGTCTTCCTTTGTTACAGC+TGG - chr4_1:44550988-44551007 None:intergenic 40.0%
AGCTGTAACAAAGGAAGACT+TGG + chr4_1:44550987-44551006 Msa0549420:CDS 40.0%
! GAAGCTGACTTCCGTAAATT+TGG + chr4_1:44551009-44551028 Msa0549420:CDS 40.0%
ATGAATGGAAAACGTATCGG+TGG + chr4_1:44551123-44551142 Msa0549420:CDS 40.0%
! TGAATGGAAAACGTATCGGT+GGG + chr4_1:44551124-44551143 Msa0549420:CDS 40.0%
ATAAATATCCCGACGTCTCA+CGG + chr4_1:44551402-44551421 Msa0549420:intron 40.0%
! ACAACTTGTTCGGTAATCCT+CGG - chr4_1:44551728-44551747 None:intergenic 40.0%
! TAGGATCAAGGGCATGATTA+TGG + chr4_1:44551818-44551837 Msa0549420:intron 40.0%
! AGGATCAAGGGCATGATTAT+GGG + chr4_1:44551819-44551838 Msa0549420:intron 40.0%
TTGTACAGTATTCTCACCAG+TGG - chr4_1:44551899-44551918 None:intergenic 40.0%
CCAACACATTACATCCAACA+AGG - chr4_1:44551969-44551988 None:intergenic 40.0%
CCTTGTTGGATGTAATGTGT+TGG + chr4_1:44551966-44551985 Msa0549420:intron 40.0%
! GGCTGATGTTTTCTTTATGC+TGG + chr4_1:44552039-44552058 Msa0549420:intron 40.0%
ATTCACAACCTCTAATGAGG+AGG + chr4_1:44552116-44552135 Msa0549420:CDS 40.0%
TGCTCATCGATCTGAACATT+GGG - chr4_1:44552187-44552206 None:intergenic 40.0%
TTGCTCATCGATCTGAACAT+TGG - chr4_1:44552188-44552207 None:intergenic 40.0%
CAAAAAGGATCATGGCATTG+TGG - chr4_1:44552216-44552235 None:intergenic 40.0%
! CACAATGCCATGATCCTTTT+TGG + chr4_1:44552214-44552233 Msa0549420:CDS 40.0%
!! TTAGAAGTGTTGATGAAGCC+CGG + chr4_1:44552290-44552309 Msa0549420:CDS 40.0%
! GCTTTTATCCTGGGAGTAAT+GGG + chr4_1:44552410-44552429 Msa0549420:CDS 40.0%
GTCGATATGGATGCTCATTT+AGG - chr4_1:44552453-44552472 None:intergenic 40.0%
TTTCCTGGACAATTGCCAAA+TGG + chr4_1:44552523-44552542 Msa0549420:CDS 40.0%
TTGCCAAATGGTGGTATTGT+TGG + chr4_1:44552535-44552554 Msa0549420:CDS 40.0%
CGAGAATAGTACACTACACA+AGG + chr4_1:44552630-44552649 Msa0549420:CDS 40.0%
CCTGCATAAGGATCATCATT+AGG - chr4_1:44552817-44552836 None:intergenic 40.0%
CCTAATGATGATCCTTATGC+AGG + chr4_1:44552814-44552833 Msa0549420:CDS 40.0%
CTGTCCAACCTGATCATATA+TGG + chr4_1:44552890-44552909 Msa0549420:CDS 40.0%
GGGTCAAATGCAAAAGAAGT+CGG - chr4_1:44553082-44553101 None:intergenic 40.0%
! ACTTTTCCAGCAAATAGGGA+TGG - chr4_1:44553107-44553126 None:intergenic 40.0%
TCTAAACAAGACCTTGAGAC+AGG - chr4_1:44553461-44553480 None:intergenic 40.0%
!! TGTCTCAAGGTCTTGTTTAG+AGG + chr4_1:44553460-44553479 Msa0549420:intron 40.0%
ACATCTGTCAGGAAATCAGA+AGG - chr4_1:44553725-44553744 None:intergenic 40.0%
TGACTTTCAGAACATCTGTC+AGG - chr4_1:44553736-44553755 None:intergenic 40.0%
!! ACAGATGTTCTGAAAGTCAC+CGG + chr4_1:44553737-44553756 Msa0549420:CDS 40.0%
CAAATGTGATGATTGGTGCA+TGG - chr4_1:44553819-44553838 None:intergenic 40.0%
GTACAGGCAAATGTGATGAT+TGG - chr4_1:44553826-44553845 None:intergenic 40.0%
TGATATGAATCCTGCAAAGG+AGG + chr4_1:44553892-44553911 Msa0549420:CDS 40.0%
! AAAACTTGTTCCTCCTTTGC+AGG - chr4_1:44553905-44553924 None:intergenic 40.0%
TAGAATCCTCGTGCAACATT+CGG - chr4_1:44553943-44553962 None:intergenic 40.0%
AAACAAGTATACCCACCTAC+AGG + chr4_1:44553974-44553993 Msa0549420:CDS 40.0%
GCTAAAGTTGCAATAAGCTC+AGG - chr4_1:44554085-44554104 None:intergenic 40.0%
AAACTGCTGAGATGGATGAA+TGG - chr4_1:44554263-44554282 None:intergenic 40.0%
TTCATCCATCTCAGCAGTTT+AGG + chr4_1:44554263-44554282 Msa0549420:CDS 40.0%
TTTGTGACACCTACTCAAAG+TGG + chr4_1:44554442-44554461 Msa0549420:CDS 40.0%
ATACTGATGACTGAAATGGG+GGG - chr4_1:44554482-44554501 None:intergenic 40.0%
GATACTGATGACTGAAATGG+GGG - chr4_1:44554483-44554502 None:intergenic 40.0%
CCTGATACTGATGACTGAAA+TGG - chr4_1:44554486-44554505 None:intergenic 40.0%
CCATTTCAGTCATCAGTATC+AGG + chr4_1:44554483-44554502 Msa0549420:CDS 40.0%
!! AAAGCCTTTCTGAGTATTGG+GGG - chr4_1:44554518-44554537 None:intergenic 40.0%
! GAAAGCCTTTCTGAGTATTG+GGG - chr4_1:44554519-44554538 None:intergenic 40.0%
GGAAAGCCTTTCTGAGTATT+GGG - chr4_1:44554520-44554539 None:intergenic 40.0%
TGGAAAGCCTTTCTGAGTAT+TGG - chr4_1:44554521-44554540 None:intergenic 40.0%
AATACTCAGAAAGGCTTTCC+AGG + chr4_1:44554520-44554539 Msa0549420:CDS 40.0%
AAAACAGAGACATCACTTCC+TGG - chr4_1:44554541-44554560 None:intergenic 40.0%
! GGTGGTTATTATTAGGTTGC+TGG - chr4_1:44554582-44554601 None:intergenic 40.0%
! TATTAGGTTGCTGGAAAGGA+TGG - chr4_1:44554603-44554622 None:intergenic 40.0%
TTAGATTGCTGGAAATGCTG+GGG - chr4_1:44554631-44554650 None:intergenic 40.0%
GGGGGTTATTATTAGATTGC+TGG - chr4_1:44554642-44554661 None:intergenic 40.0%
! GAATTATTGGGTTGCTGGAA+AGG - chr4_1:44554667-44554686 None:intergenic 40.0%
! GTTTGAGTTTACTTGGTCTG+CGG - chr4_1:44554752-44554771 None:intergenic 40.0%
TCTTATCAGCCTCCAATTCT+GGG - chr4_1:44554819-44554838 None:intergenic 40.0%
TTCTTATCAGCCTCCAATTC+TGG - chr4_1:44554820-44554839 None:intergenic 40.0%
CTCCCAAAAAGTTCACTTTG+TGG + chr4_1:44555044-44555063 Msa0549420:intron 40.0%
TGCTAGTGTAAATGATCTGC+GGG + chr4_1:44555086-44555105 Msa0549420:intron 40.0%
! TTAGATTTGGTAGGCAGTGT+TGG + chr4_1:44555207-44555226 Msa0549420:intron 40.0%
! TAGATTTGGTAGGCAGTGTT+GGG + chr4_1:44555208-44555227 Msa0549420:intron 40.0%
CAGGTGAAAAGATGCAAACT+AGG - chr4_1:44555271-44555290 None:intergenic 40.0%
CATTGCTGTAGTTTACCTTC+TGG + chr4_1:44555524-44555543 Msa0549420:intron 40.0%
AAATAAGTTCAGGGGGTGAT+TGG - chr4_1:44555740-44555759 None:intergenic 40.0%
GATGGGAAGGTAGTAAACAA+TGG - chr4_1:44555862-44555881 None:intergenic 40.0%
CTAGTTATGGTTAGATGGGA+AGG - chr4_1:44555875-44555894 None:intergenic 40.0%
CTTCCCATCTAACCATAACT+AGG + chr4_1:44555873-44555892 Msa0549420:intron 40.0%
GTCAAGCAAATCCCTAGTTA+TGG - chr4_1:44555888-44555907 None:intergenic 40.0%
ACTGAACCAGCCAACAAATT+TGG + chr4_1:44555906-44555925 Msa0549420:intron 40.0%
TTTGGTACCACATTCCATTG+TGG + chr4_1:44555924-44555943 Msa0549420:intron 40.0%
CAGTGGGTATTAAGATCTCA+GGG - chr4_1:44556038-44556057 None:intergenic 40.0%
TCAGTGGGTATTAAGATCTC+AGG - chr4_1:44556039-44556058 None:intergenic 40.0%
CGGAGTTGCTAAAATATCAG+TGG - chr4_1:44556055-44556074 None:intergenic 40.0%
CATATGTTTGGTTGTGCAGT+GGG - chr4_1:44556877-44556896 None:intergenic 40.0%
! GCTAAGTATCTCTAGTTCAG+GGG + chr4_1:44556896-44556915 Msa0549420:intron 40.0%
CCGTACTTCAGAAATGAACA+AGG + chr4_1:44557203-44557222 Msa0549420:intron 40.0%
TAATATATGTGAGGGGATCG+GGG + chr4_1:44557468-44557487 Msa0549420:intron 40.0%
! AGGTAAATAGTTGAGGTGTC+TGG - chr4_1:44557502-44557521 None:intergenic 40.0%
GGGGATTTCAGAATTCTCAA+CGG + chr4_1:44558021-44558040 Msa0549420:intron 40.0%
GGGATTTCAGAATTCTCAAC+GGG + chr4_1:44558022-44558041 Msa0549420:intron 40.0%
TTCACGGACATAAATGTCGA+TGG + chr4_1:44558075-44558094 Msa0549420:intron 40.0%
TAGGCAATGTGTTGTGGTTA+GGG + chr4_1:44558305-44558324 Msa0549420:three_prime_UTR 40.0%
GAAGAAGCTTGCGAGATTGA+GGG - chr4_1:44548294-44548313 None:intergenic 45.0%
TGAAGAAGCTTGCGAGATTG+AGG - chr4_1:44548295-44548314 None:intergenic 45.0%
GATTTGAAAAGGTGGTGCTC+TGG - chr4_1:44548323-44548342 None:intergenic 45.0%
GGCATTGCGATTTGAAAAGG+TGG - chr4_1:44548331-44548350 None:intergenic 45.0%
AACCCCATCGAACAACCTAT+GGG + chr4_1:44548390-44548409 Msa0549420:CDS 45.0%
AACCCATAGGTTGTTCGATG+GGG - chr4_1:44548395-44548414 None:intergenic 45.0%
CAACCCATAGGTTGTTCGAT+GGG - chr4_1:44548396-44548415 None:intergenic 45.0%
AGATCGGAATCTGTTACGTC+CGG - chr4_1:44548430-44548449 None:intergenic 45.0%
CGTAACAGATTCCGATCTGA+TGG + chr4_1:44548432-44548451 Msa0549420:CDS 45.0%
!!! TCCCTGAAGAGCGTTTTTAG+CGG - chr4_1:44548554-44548573 None:intergenic 45.0%
GCGCAAAAGTGAGAACAAAC+CGG - chr4_1:44548619-44548638 None:intergenic 45.0%
! GTGAAAGTTGCTGGTCTAAC+CGG + chr4_1:44549136-44549155 Msa0549420:intron 45.0%
GACACGGTTTCAATATGCAG+TGG - chr4_1:44549417-44549436 None:intergenic 45.0%
TCTGATGTGGATACAACCAG+GGG + chr4_1:44549904-44549923 Msa0549420:intron 45.0%
GATGTAGTACAGTACCAGAC+GGG - chr4_1:44549954-44549973 None:intergenic 45.0%
GTCTGGTACTGTACTACATC+TGG + chr4_1:44549954-44549973 Msa0549420:intron 45.0%
TCCCAGAAACGCATGTTATC+TGG - chr4_1:44550011-44550030 None:intergenic 45.0%
CATAGTCGGTCGTTCAAACA+AGG + chr4_1:44550418-44550437 Msa0549420:intron 45.0%
GCTGTTTACATGTCTTTGCC+TGG - chr4_1:44550945-44550964 None:intergenic 45.0%
!! TGTAAACAGCTTTGGGTAGG+TGG + chr4_1:44550955-44550974 Msa0549420:CDS 45.0%
CATTAGCCCAGCTGTAACAA+AGG + chr4_1:44550978-44550997 Msa0549420:CDS 45.0%
! GAATGGAAAACGTATCGGTG+GGG + chr4_1:44551125-44551144 Msa0549420:CDS 45.0%
TTGATCGGAGGAAGTCAACA+CGG - chr4_1:44551158-44551177 None:intergenic 45.0%
TCTCTTATATATGGGACCGG+AGG - chr4_1:44551263-44551282 None:intergenic 45.0%
! TCAATTTGGTAACTGGGGTG+TGG + chr4_1:44551439-44551458 Msa0549420:intron 45.0%
! AACTTGTTCGGTAATCCTCG+GGG - chr4_1:44551726-44551745 None:intergenic 45.0%
! CAACTTGTTCGGTAATCCTC+GGG - chr4_1:44551727-44551746 None:intergenic 45.0%
GGGCCTTCTGATTCTTATTC+TGG + chr4_1:44551863-44551882 Msa0549420:CDS 45.0%
TTCTGGACAAAAAAGGCCAC+TGG + chr4_1:44551880-44551899 Msa0549420:CDS 45.0%
ACAACCTCTAATGAGGAGGA+AGG + chr4_1:44552120-44552139 Msa0549420:CDS 45.0%
CAACCTCTAATGAGGAGGAA+GGG + chr4_1:44552121-44552140 Msa0549420:CDS 45.0%
TCATCGATCTGAACATTGGG+GGG - chr4_1:44552184-44552203 None:intergenic 45.0%
CTCATCGATCTGAACATTGG+GGG - chr4_1:44552185-44552204 None:intergenic 45.0%
GCTCATCGATCTGAACATTG+GGG - chr4_1:44552186-44552205 None:intergenic 45.0%
GTGCAAAAGAGGGTCTTCAA+GGG + chr4_1:44552314-44552333 Msa0549420:CDS 45.0%
TCTAATGGTGACCAGGTACA+CGG + chr4_1:44552373-44552392 Msa0549420:CDS 45.0%
!! ACTACCCTGGCTTTTATCCT+GGG + chr4_1:44552401-44552420 Msa0549420:CDS 45.0%
TACTCCCAGGATAAAAGCCA+GGG - chr4_1:44552408-44552427 None:intergenic 45.0%
TTACTCCCAGGATAAAAGCC+AGG - chr4_1:44552409-44552428 None:intergenic 45.0%
! GGCTTTTATCCTGGGAGTAA+TGG + chr4_1:44552409-44552428 Msa0549420:CDS 45.0%
TCCATATCGACCTGCACAAA+TGG + chr4_1:44552462-44552481 Msa0549420:CDS 45.0%
TCCATTTGTGCAGGTCGATA+TGG - chr4_1:44552466-44552485 None:intergenic 45.0%
GGACCAACAATACCACCATT+TGG - chr4_1:44552541-44552560 None:intergenic 45.0%
TTGGTCCAAACATACCAGTG+CGG + chr4_1:44552554-44552573 Msa0549420:CDS 45.0%
ACAGATTCAGGACCACCATT+AGG - chr4_1:44552589-44552608 None:intergenic 45.0%
!! GGTCCTGAATCTGTTGTTTC+TGG + chr4_1:44552595-44552614 Msa0549420:CDS 45.0%
ACAAGGGTCCAAACTGGAAA+CGG + chr4_1:44552647-44552666 Msa0549420:CDS 45.0%
! GTTGCTTTCTTCTCCTGTAC+CGG + chr4_1:44552690-44552709 Msa0549420:CDS 45.0%
TTGCTTTCTTCTCCTGTACC+GGG + chr4_1:44552691-44552710 Msa0549420:CDS 45.0%
CTTGACCGCTTAGAATCTCT+TGG - chr4_1:44552778-44552797 None:intergenic 45.0%
CAAGAGATTCTAAGCGGTCA+AGG + chr4_1:44552776-44552795 Msa0549420:CDS 45.0%
TCTAAGCGGTCAAGGATAGA+TGG + chr4_1:44552784-44552803 Msa0549420:CDS 45.0%
ATGATGATCCTTATGCAGGG+AGG + chr4_1:44552818-44552837 Msa0549420:CDS 45.0%
TGATGATCCTTATGCAGGGA+GGG + chr4_1:44552819-44552838 Msa0549420:CDS 45.0%
CAACCTGATCATATATGGCG+CGG + chr4_1:44552895-44552914 Msa0549420:CDS 45.0%
TTCCAGCAAATAGGGATGGA+GGG - chr4_1:44553103-44553122 None:intergenic 45.0%
TTTCCAGCAAATAGGGATGG+AGG - chr4_1:44553104-44553123 None:intergenic 45.0%
! AGTGATTGGCCCTTAGTTCT+TGG + chr4_1:44553377-44553396 Msa0549420:intron 45.0%
! TGGCCCTTAGTTCTTGGAAA+TGG + chr4_1:44553383-44553402 Msa0549420:intron 45.0%
! GGCCCTTAGTTCTTGGAAAT+GGG + chr4_1:44553384-44553403 Msa0549420:intron 45.0%
GGCCCATTTCCAAGAACTAA+GGG - chr4_1:44553389-44553408 None:intergenic 45.0%
! AAGTTGTGGATTGCTCAGCT+AGG + chr4_1:44553522-44553541 Msa0549420:CDS 45.0%
ACTGAATTCCTACGCTACCT+TGG + chr4_1:44553641-44553660 Msa0549420:CDS 45.0%
! TTTTTGCACCAAGGTAGCGT+AGG - chr4_1:44553652-44553671 None:intergenic 45.0%
!!! CAGCACGATTTTTTGCACCA+AGG - chr4_1:44553661-44553680 None:intergenic 45.0%
! CTTGGTGCAAAAAATCGTGC+TGG + chr4_1:44553659-44553678 Msa0549420:CDS 45.0%
TCTGTCAGGAAATCAGAAGG+AGG - chr4_1:44553722-44553741 None:intergenic 45.0%
ACCATATAGACGTTCAGGTC+CGG - chr4_1:44553759-44553778 None:intergenic 45.0%
ACGACACCATATAGACGTTC+AGG - chr4_1:44553764-44553783 None:intergenic 45.0%
TCATATTCAGCCTGTGAAGG+AGG - chr4_1:44553875-44553894 None:intergenic 45.0%
TTACAACCGAATGTTGCACG+AGG + chr4_1:44553934-44553953 Msa0549420:CDS 45.0%
GGTGGGTATACTTGTTTAGC+AGG - chr4_1:44553971-44553990 None:intergenic 45.0%
AAGTATACCCACCTACAGGT+GGG + chr4_1:44553978-44553997 Msa0549420:CDS 45.0%
! GCAGTGTTTAGAGCATAGTC+CGG - chr4_1:44554028-44554047 None:intergenic 45.0%
! CTCTAAACACTGCTGCTTCT+GGG + chr4_1:44554035-44554054 Msa0549420:CDS 45.0%
GACTTAGCACCATCAATAGC+AGG - chr4_1:44554136-44554155 None:intergenic 45.0%
!! GCTATTGATGGTGCTAAGTC+AGG + chr4_1:44554136-44554155 Msa0549420:CDS 45.0%
AAATGGAGGCTTCACAGTTG+AGG - chr4_1:44554170-44554189 None:intergenic 45.0%
! TTTCCATCATTAGGTGCCAC+AGG - chr4_1:44554196-44554215 None:intergenic 45.0%
!! AAACAACTCCTTGCTGTTGC+TGG - chr4_1:44554402-44554421 None:intergenic 45.0%
!! AAGCCTTTCTGAGTATTGGG+GGG - chr4_1:44554517-44554536 None:intergenic 45.0%
! GGGGGTTATTATTAGGTTGC+TGG - chr4_1:44554612-44554631 None:intergenic 45.0%
TAGATTGCTGGAAATGCTGG+GGG - chr4_1:44554630-44554649 None:intergenic 45.0%
TCTGCGGTATATTGCATGAC+AGG - chr4_1:44554736-44554755 None:intergenic 45.0%
! TGGGAGGGTTTGAGTTTACT+TGG - chr4_1:44554759-44554778 None:intergenic 45.0%
AAGGCAGGATGTTGTTGGAT+GGG - chr4_1:44554778-44554797 None:intergenic 45.0%
AAAGGCAGGATGTTGTTGGA+TGG - chr4_1:44554779-44554798 None:intergenic 45.0%
ATCCAACAACATCCTGCCTT+TGG + chr4_1:44554778-44554797 Msa0549420:CDS 45.0%
TTATCAGCCTCCAATTCTGG+GGG - chr4_1:44554817-44554836 None:intergenic 45.0%
CTTATCAGCCTCCAATTCTG+GGG - chr4_1:44554818-44554837 None:intergenic 45.0%
! GCAATGTTGACTGGTATCTC+TGG - chr4_1:44554843-44554862 None:intergenic 45.0%
CAGCAAACTGCAATGTTGAC+TGG - chr4_1:44554852-44554871 None:intergenic 45.0%
! GTGTTTGCTGCTGCTGTATT+TGG - chr4_1:44554888-44554907 None:intergenic 45.0%
ATACAGCAGCAGCAAACACA+AGG + chr4_1:44554889-44554908 Msa0549420:CDS 45.0%
AGCAAACACAAGGAGGACAT+GGG + chr4_1:44554899-44554918 Msa0549420:CDS 45.0%
GTTTACATGTCACATGACGC+AGG - chr4_1:44555119-44555138 None:intergenic 45.0%
! AGATTTGGTAGGCAGTGTTG+GGG + chr4_1:44555209-44555228 Msa0549420:intron 45.0%
ACATCCTCCTTGCAAAGCTT+TGG - chr4_1:44555236-44555255 None:intergenic 45.0%
!! GTGGTACCAAATTTGTTGGC+TGG - chr4_1:44555915-44555934 None:intergenic 45.0%
AAATTAGCGGGGATCCACAA+TGG - chr4_1:44555941-44555960 None:intergenic 45.0%
CAAGACTAGAGCCTATCCTT+AGG + chr4_1:44556300-44556319 Msa0549420:intron 45.0%
!! GGCTGACTTTTCCTAAGGAT+AGG - chr4_1:44556314-44556333 None:intergenic 45.0%
GCATATGTTTGGTTGTGCAG+TGG - chr4_1:44556878-44556897 None:intergenic 45.0%
AGGGGCAATTGATGCATAAC+TGG + chr4_1:44556914-44556933 Msa0549420:intron 45.0%
!! AGTACGCGCATTTTAGTGTC+CGG - chr4_1:44557026-44557045 None:intergenic 45.0%
GATAGTTGGATCTAGCGGAA+GGG - chr4_1:44557094-44557113 None:intergenic 45.0%
AGATAGTTGGATCTAGCGGA+AGG - chr4_1:44557095-44557114 None:intergenic 45.0%
TTCATCCGTTATTGCAGCGT+TGG + chr4_1:44557253-44557272 Msa0549420:intron 45.0%
ATGCTCCAACGCTGCAATAA+CGG - chr4_1:44557261-44557280 None:intergenic 45.0%
ACGGGCGCATAATATATGTG+AGG + chr4_1:44557459-44557478 Msa0549420:intron 45.0%
CGGGCGCATAATATATGTGA+GGG + chr4_1:44557460-44557479 Msa0549420:intron 45.0%
GGGCGCATAATATATGTGAG+GGG + chr4_1:44557461-44557480 Msa0549420:intron 45.0%
TCAACGACATAGTGCGTGTT+TGG - chr4_1:44557966-44557985 None:intergenic 45.0%
GTAGGCAATGTGTTGTGGTT+AGG + chr4_1:44558304-44558323 Msa0549420:three_prime_UTR 45.0%
!!! CTTTTTTTTTTTTTTTTTTT+TGG - chr4_1:44550346-44550365 None:intergenic 5.0%
!! AAATAAATATATAAATAAGA+TGG + chr4_1:44556717-44556736 Msa0549420:intron 5.0%
GGCGGCATTGCGATTTGAAA+AGG - chr4_1:44548334-44548353 None:intergenic 50.0%
CAACCCCATCGAACAACCTA+TGG + chr4_1:44548389-44548408 Msa0549420:CDS 50.0%
GCAACCCATAGGTTGTTCGA+TGG - chr4_1:44548397-44548416 None:intergenic 50.0%
GCGATAGATTCGCAACCCAT+AGG - chr4_1:44548408-44548427 None:intergenic 50.0%
! ATGGGTTGCGAATCTATCGC+CGG + chr4_1:44548408-44548427 Msa0549420:CDS 50.0%
! CACGAAAGCGTAATTGCGAG+AGG - chr4_1:44548503-44548522 None:intergenic 50.0%
AGCCGCTAAAAACGCTCTTC+AGG + chr4_1:44548549-44548568 Msa0549420:CDS 50.0%
GCCGCTAAAAACGCTCTTCA+GGG + chr4_1:44548550-44548569 Msa0549420:CDS 50.0%
TGTTTGGCAAGTTGCACGTC+AGG - chr4_1:44549482-44549501 None:intergenic 50.0%
CGGTGGTAACAGGGATAGTT+TGG - chr4_1:44550038-44550057 None:intergenic 50.0%
TGACTATTCCACTAACCCCG+AGG + chr4_1:44551708-44551727 Msa0549420:intron 50.0%
TCACCCTTCCTCCTCATTAG+AGG - chr4_1:44552127-44552146 None:intergenic 50.0%
CTAATGAGGAGGAAGGGTGA+CGG + chr4_1:44552127-44552146 Msa0549420:CDS 50.0%
CGTGCAAAAGAGGGTCTTCA+AGG + chr4_1:44552313-44552332 Msa0549420:CDS 50.0%
!! GACTACCCTGGCTTTTATCC+TGG + chr4_1:44552400-44552419 Msa0549420:CDS 50.0%
CCACCATTTGGCAATTGTCC+AGG - chr4_1:44552529-44552548 None:intergenic 50.0%
CCTGGACAATTGCCAAATGG+TGG + chr4_1:44552526-44552545 Msa0549420:CDS 50.0%
! AAAGGCCGCACTGGTATGTT+TGG - chr4_1:44552562-44552581 None:intergenic 50.0%
! AACATACCAGTGCGGCCTTT+TGG + chr4_1:44552562-44552581 Msa0549420:CDS 50.0%
GGACCACCATTAGGACCAAA+AGG - chr4_1:44552580-44552599 None:intergenic 50.0%
GGGCCAGAAACAACAGATTC+AGG - chr4_1:44552601-44552620 None:intergenic 50.0%
CACTACACAAGGGTCCAAAC+TGG + chr4_1:44552641-44552660 Msa0549420:CDS 50.0%
GAAGAAAGCAACCCTTGTGC+AGG - chr4_1:44552682-44552701 None:intergenic 50.0%
AAGATCGTCCTCTGGTGCAT+GGG + chr4_1:44552729-44552748 Msa0549420:CDS 50.0%
AAGTACATCCCATGCACCAG+AGG - chr4_1:44552740-44552759 None:intergenic 50.0%
GATGATCCTTATGCAGGGAG+GGG + chr4_1:44552820-44552839 Msa0549420:CDS 50.0%
TCAGCAAGCACGAGGATTAC+AGG + chr4_1:44552853-44552872 Msa0549420:CDS 50.0%
CGCGCCATATATGATCAGGT+TGG - chr4_1:44552897-44552916 None:intergenic 50.0%
AGTCCGCGCCATATATGATC+AGG - chr4_1:44552901-44552920 None:intergenic 50.0%
TGGCGCGGACTTATTGCAAA+AGG + chr4_1:44552910-44552929 Msa0549420:CDS 50.0%
CGCGGACTTATTGCAAAAGG+AGG + chr4_1:44552913-44552932 Msa0549420:CDS 50.0%
ACGCATCTAGCACGACAAAC+AGG - chr4_1:44552943-44552962 None:intergenic 50.0%
TCCAGCAAATAGGGATGGAG+GGG - chr4_1:44553102-44553121 None:intergenic 50.0%
GGGCCCATTTCCAAGAACTA+AGG - chr4_1:44553390-44553409 None:intergenic 50.0%
! TGTGGATTGCTCAGCTAGGA+CGG + chr4_1:44553526-44553545 Msa0549420:CDS 50.0%
ACCGGACCTGAACGTCTATA+TGG + chr4_1:44553755-44553774 Msa0549420:CDS 50.0%
! AAGTTTGCACCAGTACCGAG+TGG + chr4_1:44553788-44553807 Msa0549420:CDS 50.0%
CAAGTATACCCACCTACAGG+TGG + chr4_1:44553977-44553996 Msa0549420:CDS 50.0%
! GCTCTAAACACTGCTGCTTC+TGG + chr4_1:44554034-44554053 Msa0549420:CDS 50.0%
! TTAGGTGCCACAGGAGGAAA+TGG - chr4_1:44554187-44554206 None:intergenic 50.0%
AACGTTTGAGCAGTGTGGCT+AGG - chr4_1:44554343-44554362 None:intergenic 50.0%
CAGAGAACGTTTGAGCAGTG+TGG - chr4_1:44554348-44554367 None:intergenic 50.0%
CACACTGCTCAAACGTTCTC+TGG + chr4_1:44554346-44554365 Msa0549420:CDS 50.0%
GACACCTACTCAAAGTGGAC+AGG + chr4_1:44554447-44554466 Msa0549420:CDS 50.0%
GCTACCTGTCCACTTTGAGT+AGG - chr4_1:44554454-44554473 None:intergenic 50.0%
GTTCCCCCCAATACTCAGAA+AGG + chr4_1:44554511-44554530 Msa0549420:CDS 50.0%
TAGGTTGCTGGAAAGGATGG+TGG - chr4_1:44554600-44554619 None:intergenic 50.0%
! ATTGGGTTGCTGGAAAGGCT+GGG - chr4_1:44554662-44554681 None:intergenic 50.0%
! TATTGGGTTGCTGGAAAGGC+TGG - chr4_1:44554663-44554682 None:intergenic 50.0%
CAGGATGTTGTTGGATGGGA+GGG - chr4_1:44554774-44554793 None:intergenic 50.0%
CTCCAAAGGCAGGATGTTGT+TGG - chr4_1:44554783-44554802 None:intergenic 50.0%
!! CAACATCCTGCCTTTGGAGT+TGG + chr4_1:44554784-44554803 Msa0549420:CDS 50.0%
TATCAGCCTCCAATTCTGGG+GGG - chr4_1:44554816-44554835 None:intergenic 50.0%
CAGCAAACACAAGGAGGACA+TGG + chr4_1:44554898-44554917 Msa0549420:CDS 50.0%
TTGGGGTCCAAAGCTTTGCA+AGG + chr4_1:44555226-44555245 Msa0549420:intron 50.0%
CATGGTTCAATCAGCCCTGA+TGG + chr4_1:44556427-44556446 Msa0549420:intron 50.0%
AGCAGACGCGGATACAAACA+TGG - chr4_1:44556798-44556817 None:intergenic 50.0%
TGACTCTCAAATGGACGCGT+AGG + chr4_1:44558286-44558305 Msa0549420:three_prime_UTR 50.0%
TCAAATCGCAATGCCGCCTC+CGG + chr4_1:44548336-44548355 Msa0549420:exon 55.0%
GATTCATCCGAGTCTCGCGT+TGG - chr4_1:44548367-44548386 None:intergenic 55.0%
TAGATCCTGCCGTGAGACGT+CGG - chr4_1:44551414-44551433 None:intergenic 55.0%
TCGGTAATCCTCGGGGTTAG+TGG - chr4_1:44551719-44551738 None:intergenic 55.0%
! AAGACCCTCTTTTGCACGCC+GGG - chr4_1:44552311-44552330 None:intergenic 55.0%
! GAAGACCCTCTTTTGCACGC+CGG - chr4_1:44552312-44552331 None:intergenic 55.0%
GGTAGTCTTTGCCGTGTACC+TGG - chr4_1:44552387-44552406 None:intergenic 55.0%
GTACACGGCAAAGACTACCC+TGG + chr4_1:44552388-44552407 Msa0549420:CDS 55.0%
TTAGGACCAAAAGGCCGCAC+TGG - chr4_1:44552571-44552590 None:intergenic 55.0%
! GTGCGGCCTTTTGGTCCTAA+TGG + chr4_1:44552571-44552590 Msa0549420:CDS 55.0%
! CGGCCTTTTGGTCCTAATGG+TGG + chr4_1:44552574-44552593 Msa0549420:CDS 55.0%
GGAGATGGCCGTTTCCAGTT+TGG - chr4_1:44552658-44552677 None:intergenic 55.0%
AACCCTTGTGCAGGAGGAGA+TGG - chr4_1:44552673-44552692 None:intergenic 55.0%
GAAAGCAACCCTTGTGCAGG+AGG - chr4_1:44552679-44552698 None:intergenic 55.0%
CTTCCTGCAAGATCGTCCTC+TGG + chr4_1:44552721-44552740 Msa0549420:CDS 55.0%
CAAGATCGTCCTCTGGTGCA+TGG + chr4_1:44552728-44552747 Msa0549420:CDS 55.0%
AGGATACCCCTCCCTGCATA+AGG - chr4_1:44552829-44552848 None:intergenic 55.0%
!! TATGCAGGGAGGGGTATCCT+TGG + chr4_1:44552829-44552848 Msa0549420:CDS 55.0%
TCCTTGGTTCAGCAAGCACG+AGG + chr4_1:44552845-44552864 Msa0549420:CDS 55.0%
! TCCTCGTGCTTGCTGAACCA+AGG - chr4_1:44552849-44552868 None:intergenic 55.0%
GCAAGCACGAGGATTACAGG+TGG + chr4_1:44552856-44552875 Msa0549420:CDS 55.0%
GTGCTAGATGCGTCCCTGTA+GGG + chr4_1:44552950-44552969 Msa0549420:CDS 55.0%
AGATGCGTCCCTGTAGGGAA+AGG + chr4_1:44552955-44552974 Msa0549420:CDS 55.0%
GATGCGTCCCTGTAGGGAAA+GGG + chr4_1:44552956-44552975 Msa0549420:CDS 55.0%
GTCCCTGTAGGGAAAGGGAT+CGG + chr4_1:44552961-44552980 Msa0549420:CDS 55.0%
TCCCTGTAGGGAAAGGGATC+GGG + chr4_1:44552962-44552981 Msa0549420:CDS 55.0%
TCCCGATCCCTTTCCCTACA+GGG - chr4_1:44552966-44552985 None:intergenic 55.0%
ACCCCTCCATCCCTATTTGC+TGG + chr4_1:44553098-44553117 Msa0549420:intron 55.0%
! GTGGATTGCTCAGCTAGGAC+GGG + chr4_1:44553527-44553546 Msa0549420:CDS 55.0%
TTGCTCAGCTAGGACGGGAT+TGG + chr4_1:44553532-44553551 Msa0549420:CDS 55.0%
AAGAAGGCCCACCTGTAGGT+GGG - chr4_1:44553988-44554007 None:intergenic 55.0%
ACTGAAGAAGGCCCACCTGT+AGG - chr4_1:44553992-44554011 None:intergenic 55.0%
GCTGCAGGCTGAACTGAAGA+AGG - chr4_1:44554004-44554023 None:intergenic 55.0%
TTCAGTTCAGCCTGCAGCTC+CGG + chr4_1:44554006-44554025 Msa0549420:CDS 55.0%
! GATGGTGCTAAGTCAGGTGC+AGG + chr4_1:44554142-44554161 Msa0549420:CDS 55.0%
GAAGCCTCCATTTCCTCCTG+TGG + chr4_1:44554177-44554196 Msa0549420:CDS 55.0%
! CCATCATTAGGTGCCACAGG+AGG - chr4_1:44554193-44554212 None:intergenic 55.0%
CCTCCTGTGGCACCTAATGA+TGG + chr4_1:44554190-44554209 Msa0549420:CDS 55.0%
GCTGTTAGCCAGCAACAGCA+AGG + chr4_1:44554391-44554410 Msa0549420:CDS 55.0%
! TTGGGTTGCTGGAAAGGCTG+GGG - chr4_1:44554661-44554680 None:intergenic 55.0%
TGCATGACAGGCTGATGCTG+AGG - chr4_1:44554724-44554743 None:intergenic 55.0%
GCAGGATGTTGTTGGATGGG+AGG - chr4_1:44554775-44554794 None:intergenic 55.0%
CCTTGACCAACTCCAAAGGC+AGG - chr4_1:44554793-44554812 None:intergenic 55.0%
!! CCTGCCTTTGGAGTTGGTCA+AGG + chr4_1:44554790-44554809 Msa0549420:CDS 55.0%
CAGCAGCAGCAAACACAAGG+AGG + chr4_1:44554892-44554911 Msa0549420:CDS 55.0%
GGGTCCAAAGCTTTGCAAGG+AGG + chr4_1:44555229-44555248 Msa0549420:intron 55.0%
CGGGGATCCACAATGGAATG+TGG - chr4_1:44555934-44555953 None:intergenic 55.0%
!! CCAGGGGCTGACTTTTCCTA+AGG - chr4_1:44556319-44556338 None:intergenic 55.0%
CCTTAGGAAAAGTCAGCCCC+TGG + chr4_1:44556316-44556335 Msa0549420:intron 55.0%
GACGCGTAGGCAATGTGTTG+TGG + chr4_1:44558299-44558318 Msa0549420:three_prime_UTR 55.0%
ATATCCCGACGTCTCACGGC+AGG + chr4_1:44551406-44551425 Msa0549420:intron 60.0%
AGATCCTGCCGTGAGACGTC+GGG - chr4_1:44551413-44551432 None:intergenic 60.0%
TGAAGCCCGGCGTGCAAAAG+AGG + chr4_1:44552303-44552322 Msa0549420:CDS 60.0%
GAAGCCCGGCGTGCAAAAGA+GGG + chr4_1:44552304-44552323 Msa0549420:CDS 60.0%
GGTCTTGGCCCATTACTCCC+AGG - chr4_1:44552421-44552440 None:intergenic 60.0%
GGCCATCTCCTCCTGCACAA+GGG + chr4_1:44552668-44552687 Msa0549420:CDS 60.0%
CTTCTCCTGTACCGGGTGCT+AGG + chr4_1:44552698-44552717 Msa0549420:CDS 60.0%
CTTGCAGGAAGCCTAGCACC+CGG - chr4_1:44552712-44552731 None:intergenic 60.0%
GCACCAGAGGACGATCTTGC+AGG - chr4_1:44552727-44552746 None:intergenic 60.0%
CGTGCTAGATGCGTCCCTGT+AGG + chr4_1:44552949-44552968 Msa0549420:CDS 60.0%
GTCCCGATCCCTTTCCCTAC+AGG - chr4_1:44552967-44552986 None:intergenic 60.0%
ATGGGCACACCACTCGGTAC+TGG - chr4_1:44553800-44553819 None:intergenic 60.0%
TGGTGCATGGGCACACCACT+CGG - chr4_1:44553806-44553825 None:intergenic 60.0%
GCAGCAGATGCCTCCTTCAC+AGG + chr4_1:44553862-44553881 Msa0549420:CDS 60.0%
GAAGAAGGCCCACCTGTAGG+TGG - chr4_1:44553989-44554008 None:intergenic 60.0%
AGAGCATAGTCCGGAGCTGC+AGG - chr4_1:44554019-44554038 None:intergenic 60.0%
GCTGCTTCTGGGTCTCAAGC+TGG + chr4_1:44554046-44554065 Msa0549420:CDS 60.0%
GCAGGCGACTGCGCATTTGT+GGG - chr4_1:44554118-44554137 None:intergenic 60.0%
AGCAGGCGACTGCGCATTTG+TGG - chr4_1:44554119-44554138 None:intergenic 60.0%
GCGCAGTCGCCTGCTATTGA+TGG + chr4_1:44554124-44554143 Msa0549420:CDS 60.0%
! GGTGCCACAGGAGGAAATGG+AGG - chr4_1:44554184-44554203 None:intergenic 60.0%
TGGCTAGGAGCTGATGCTGG+CGG - chr4_1:44554328-44554347 None:intergenic 60.0%
GTGTGGCTAGGAGCTGATGC+TGG - chr4_1:44554331-44554350 None:intergenic 60.0%
TGGGTTGCTGGAAAGGCTGG+GGG - chr4_1:44554660-44554679 None:intergenic 60.0%
GGGGCCTTGACCAACTCCAA+AGG - chr4_1:44554797-44554816 None:intergenic 60.0%
TGGTCAAGGCCCCCCAGAAT+TGG + chr4_1:44554804-44554823 Msa0549420:CDS 60.0%
TCAAGGCCCCCCAGAATTGG+AGG + chr4_1:44554807-44554826 Msa0549420:CDS 60.0%
ACACAAGGAGGACATGGGCC+AGG + chr4_1:44554904-44554923 Msa0549420:CDS 60.0%
! GTCTAGGGGACTAGCAGACG+CGG - chr4_1:44556810-44556829 None:intergenic 60.0%
!! AGTGGGTTGTCGCGCGTCTA+GGG - chr4_1:44556860-44556879 None:intergenic 60.0%
CGCACGAACGCTAGAGACAG+AGG + chr4_1:44558331-44558350 Msa0549420:three_prime_UTR 60.0%
!! GAGTCTCGCGTTGGCTTCGC+CGG - chr4_1:44548358-44548377 None:intergenic 65.0%
GGCGAAGCCAACGCGAGACT+CGG + chr4_1:44548357-44548376 Msa0549420:CDS 65.0%
CGGCCATCTCCTCCTGCACA+AGG + chr4_1:44552667-44552686 Msa0549420:CDS 65.0%
GGAAGCCTAGCACCCGGTAC+AGG - chr4_1:44552706-44552725 None:intergenic 65.0%
! GGAGCTGATGCTGGCGGGTA+AGG - chr4_1:44554322-44554341 None:intergenic 65.0%
GGCTAGGAGCTGATGCTGGC+GGG - chr4_1:44554327-44554346 None:intergenic 65.0%
! GTGGGTTGTCGCGCGTCTAG+GGG - chr4_1:44556859-44556878 None:intergenic 65.0%
!! CAGTGGGTTGTCGCGCGTCT+AGG - chr4_1:44556861-44556880 None:intergenic 65.0%
!! TCTCGCGTTGGCTTCGCCGG+AGG - chr4_1:44548355-44548374 None:intergenic 70.0%
!! CGCGTTGGCTTCGCCGGAGG+CGG - chr4_1:44548352-44548371 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 44548222 44558559 44548222 ID=Msa0549420;Name=Msa0549420
chr4_1 mRNA 44548222 44558559 44548222 ID=Msa0549420-mRNA-1;Parent=Msa0549420;Name=Msa0549420-mRNA-1;_AED=0.02;_eAED=0.02;_QI=124|1|1|1|0.8|0.66|6|327|966
chr4_1 exon 44548222 44548618 44548222 ID=Msa0549420-mRNA-1:exon:11564;Parent=Msa0549420-mRNA-1
chr4_1 exon 44550946 44551191 44550946 ID=Msa0549420-mRNA-1:exon:11565;Parent=Msa0549420-mRNA-1
chr4_1 exon 44551821 44551901 44551821 ID=Msa0549420-mRNA-1:exon:11566;Parent=Msa0549420-mRNA-1
chr4_1 exon 44552115 44552992 44552115 ID=Msa0549420-mRNA-1:exon:11567;Parent=Msa0549420-mRNA-1
chr4_1 exon 44553517 44554951 44553517 ID=Msa0549420-mRNA-1:exon:11568;Parent=Msa0549420-mRNA-1
chr4_1 exon 44558245 44558559 44558245 ID=Msa0549420-mRNA-1:exon:11569;Parent=Msa0549420-mRNA-1
chr4_1 five_prime_UTR 44548222 44548345 44548222 ID=Msa0549420-mRNA-1:five_prime_utr;Parent=Msa0549420-mRNA-1
chr4_1 CDS 44548346 44548618 44548346 ID=Msa0549420-mRNA-1:cds;Parent=Msa0549420-mRNA-1
chr4_1 CDS 44550946 44551191 44550946 ID=Msa0549420-mRNA-1:cds;Parent=Msa0549420-mRNA-1
chr4_1 CDS 44551821 44551901 44551821 ID=Msa0549420-mRNA-1:cds;Parent=Msa0549420-mRNA-1
chr4_1 CDS 44552115 44552992 44552115 ID=Msa0549420-mRNA-1:cds;Parent=Msa0549420-mRNA-1
chr4_1 CDS 44553517 44554939 44553517 ID=Msa0549420-mRNA-1:cds;Parent=Msa0549420-mRNA-1
chr4_1 three_prime_UTR 44554940 44554951 44554940 ID=Msa0549420-mRNA-1:three_prime_utr;Parent=Msa0549420-mRNA-1
chr4_1 three_prime_UTR 44558245 44558559 44558245 ID=Msa0549420-mRNA-1:three_prime_utr;Parent=Msa0549420-mRNA-1
Gene Sequence

>Msa0549420

ATGCCGCCTCCGGCGAAGCCAACGCGAGACTCGGATGAATCTTCAACCCCATCGAACAACCTATGGGTTGCGAATCTATCGCCGGACGTAACAGATTCCGATCTGATGGATCTGTTCGTTCAATACGGAGCTCTCGATAGCGTCACATCTTATTCCTCTCGCAATTACGCTTTCGTGTTCTTCAAACGCATTGATGATGCAAAAGCCGCTAAAAACGCTCTTCAGGGATTCAATTTTCGTGGCAATTCCTTGAAAATTGAGTTTGCTAGACCGGCAAAGACATGTAAACAGCTTTGGGTAGGTGGCATTAGCCCAGCTGTAACAAAGGAAGACTTGGAAGCTGACTTCCGTAAATTTGGTAAAGTTGAGGATTTCAAGTTCTTCAGAGACAGAAATACTGCATGTGTTGAATTTTTCAATTTAGATGATGCTATTCAGGCAATGAAAATTATGAATGGAAAACGTATCGGTGGGGAAAATATCCGTGTTGACTTCCTCCGATCAAATTATGCAAAAAGAGATCAAGGGCATGATTATGGGCAATTTCAAGGCAAAAGCTTTGGGCCTTCTGATTCTTATTCTGGACAAAAAAGGCCACTGAATTCACAACCTCTAATGAGGAGGAAGGGTGACGGTCAACCCAATAATATTTTGTGGATCGGTTATCCCCCCAATGTTCAGATCGATGAGCAAATGCTCCACAATGCCATGATCCTTTTTGGTGAAATTGAGAGAATCAAGAGTTTTCCTTCAAGAAATTTTTCATTTGTTGAATTTAGAAGTGTTGATGAAGCCCGGCGTGCAAAAGAGGGTCTTCAAGGGCGCCTTTTCAATGATCCTCACATAACAATTAATTATTCTAATGGTGACCAGGTACACGGCAAAGACTACCCTGGCTTTTATCCTGGGAGTAATGGGCCAAGACCTGATTTATTCCTAAATGAGCATCCATATCGACCTGCACAAATGGATTTATTTGGTCATAATCGTCCTATGATTCCGAATAGTTTTCCTGGACAATTGCCAAATGGTGGTATTGTTGGTCCAAACATACCAGTGCGGCCTTTTGGTCCTAATGGTGGTCCTGAATCTGTTGTTTCTGGCCCTGAGTTTAACGAGAATAGTACACTACACAAGGGTCCAAACTGGAAACGGCCATCTCCTCCTGCACAAGGGTTGCTTTCTTCTCCTGTACCGGGTGCTAGGCTTCCTGCAAGATCGTCCTCTGGTGCATGGGATGTACTTGACATAAATCATATTCCAAGAGATTCTAAGCGGTCAAGGATAGATGGTGCATTACCTAATGATGATCCTTATGCAGGGAGGGGTATCCTTGGTTCAGCAAGCACGAGGATTACAGGTGGAGTACATGCTTCTGTCCAACCTGATCATATATGGCGCGGACTTATTGCAAAAGGAGGAACTCCTGTTTGTCGTGCTAGATGCGTCCCTGTAGGGAAAGGGATCGGGACAGAGCTTCCTGAAGTTGTGGATTGCTCAGCTAGGACGGGATTGGATACACTTGCAGCACACTATGCTGATGCAATTGACTTTGAGATTGTTTTCTTTCTGCCTGATAGTGAAAATGATTTTGGTTCATACACTGAATTCCTACGCTACCTTGGTGCAAAAAATCGTGCTGGTGTTGCCAAATTTGACAATACAACTTTATTCTTGGTACCTCCTTCTGATTTCCTGACAGATGTTCTGAAAGTCACCGGACCTGAACGTCTATATGGTGTCGTTCTCAAGTTTGCACCAGTACCGAGTGGTGTGCCCATGCACCAATCATCACATTTGCCTGTACCGTCAAATCAATATATGCAGCAGATGCCTCCTTCACAGGCTGAATATGATATGAATCCTGCAAAGGAGGAACAAGTTTTAGCAATGAATTACAACCGAATGTTGCACGAGGATTCTAAGCTTCCTGCTAAACAAGTATACCCACCTACAGGTGGGCCTTCTTCAGTTCAGCCTGCAGCTCCGGACTATGCTCTAAACACTGCTGCTTCTGGGTCTCAAGCTGGAGTTGCATTAACACCTGAGCTTATTGCAACTTTAGCTTCTTTTCTGCCCACAAATGCGCAGTCGCCTGCTATTGATGGTGCTAAGTCAGGTGCAGGCTCCTCAACTGTGAAGCCTCCATTTCCTCCTGTGGCACCTAATGATGGAAACCAATCTCAATTATGGAAACAGGATCATCAAATTGCGGATCAATCCATTCATCCATCTCAGCAGTTTAGGAATATGTATAACAGTCAGAATGCTCATTATCAGCCTTACCCGCCAGCATCAGCTCCTAGCCACACTGCTCAAACGTTCTCTGGCAGTTCTCATATTCAAGACAATGCTGTTAGCCAGCAACAGCAAGGAGTTGTTTCATCTAGACTCGTGTCTAATTTTGTGACACCTACTCAAAGTGGACAGGTAGCTGCATCCCCCCATTTCAGTCATCAGTATCAGGCTGAAGTTCCCCCCAATACTCAGAAAGGCTTTCCAGGAAGTGATGTCTCTGTTTTATACAATTCTCAGGCTTTCCAGCAACCTAATAATAACCACCATCCTTTCCAGCAACCTAATAATAACCCCCAGCATTTCCAGCAATCTAATAATAACCCCCAGCCTTTCCAGCAACCCAATAATTCTATTGCCTTATCTAGTCAAGTTAACAGTGCTAATCCTCAGCATCAGCCTGTCATGCAATATACCGCAGACCAAGTAAACTCAAACCCTCCCATCCAACAACATCCTGCCTTTGGAGTTGGTCAAGGCCCCCCAGAATTGGAGGCTGATAAGAACCAGAGATACCAGTCAACATTGCAGTTTGCTGCCAATCTTCTACTCCAAATACAGCAGCAGCAAACACAAGGAGGACATGGGCCAGGAGTTCAACAATAA
Protein sequence

>Msa0549420

MPPPAKPTRDSDESSTPSNNLWVANLSPDVTDSDLMDLFVQYGALDSVTSYSSRNYAFVFFKRIDDAKAAKNALQGFNFRGNSLKIEFARPAKTCKQLWVGGISPAVTKEDLEADFRKFGKVEDFKFFRDRNTACVEFFNLDDAIQAMKIMNGKRIGGENIRVDFLRSNYAKRDQGHDYGQFQGKSFGPSDSYSGQKRPLNSQPLMRRKGDGQPNNILWIGYPPNVQIDEQMLHNAMILFGEIERIKSFPSRNFSFVEFRSVDEARRAKEGLQGRLFNDPHITINYSNGDQVHGKDYPGFYPGSNGPRPDLFLNEHPYRPAQMDLFGHNRPMIPNSFPGQLPNGGIVGPNIPVRPFGPNGGPESVVSGPEFNENSTLHKGPNWKRPSPPAQGLLSSPVPGARLPARSSSGAWDVLDINHIPRDSKRSRIDGALPNDDPYAGRGILGSASTRITGGVHASVQPDHIWRGLIAKGGTPVCRARCVPVGKGIGTELPEVVDCSARTGLDTLAAHYADAIDFEIVFFLPDSENDFGSYTEFLRYLGAKNRAGVAKFDNTTLFLVPPSDFLTDVLKVTGPERLYGVVLKFAPVPSGVPMHQSSHLPVPSNQYMQQMPPSQAEYDMNPAKEEQVLAMNYNRMLHEDSKLPAKQVYPPTGGPSSVQPAAPDYALNTAASGSQAGVALTPELIATLASFLPTNAQSPAIDGAKSGAGSSTVKPPFPPVAPNDGNQSQLWKQDHQIADQSIHPSQQFRNMYNSQNAHYQPYPPASAPSHTAQTFSGSSHIQDNAVSQQQQGVVSSRLVSNFVTPTQSGQVAASPHFSHQYQAEVPPNTQKGFPGSDVSVLYNSQAFQQPNNNHHPFQQPNNNPQHFQQSNNNPQPFQQPNNSIALSSQVNSANPQHQPVMQYTADQVNSNPPIQQHPAFGVGQGPPELEADKNQRYQSTLQFAANLLLQIQQQQTQGGHGPGVQQ*