AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1400970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1400970 MtrunA17_Chr4g0057621 97.321 336 3 1 1 330 1 336 0.0 668
Msa1400970 MtrunA17_Chr3g0136251 87.786 131 16 0 201 331 24 154 1.58e-79 241
Msa1400970 MtrunA17_Chr3g0136261 75.309 81 15 1 1 81 1 76 4.31e-36 126
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1400970 AT4G24840.1 70.679 324 87 2 13 330 19 340 3.58e-161 469

Find 198 sgRNAs with CRISPR-Local

Find 499 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCGCCAGGATCTAAATTT+TGG 0.128676 tig0022494:-82970 None:intergenic
CTTCAATTGCCTCAGGTTTC+AGG 0.144008 tig0022494:+82895 Msa1400970:intron
CAAATCAAGCTTGGAATTCT+TGG 0.186303 tig0022494:+82363 Msa1400970:three_prime_UTR
GGGTCATCGGCTGTGGCTTC+TGG 0.189894 tig0022494:+81838 Msa1400970:CDS
TATCCTTGCAGCTTCTTTCT+AGG 0.197736 tig0022494:+83104 Msa1400970:three_prime_UTR
TGTATCTCTGTTGGAGAGTT+TGG 0.222147 tig0022494:+83024 Msa1400970:three_prime_UTR
GTCATACGGCATTGGTTTCT+TGG 0.234998 tig0022494:+82006 Msa1400970:three_prime_UTR
GCAGTTCTTCCTTGATATTC+AGG 0.239412 tig0022494:+86157 Msa1400970:three_prime_UTR
AGGCATTCCTCAGTCCTTCT+TGG 0.272680 tig0022494:+82048 Msa1400970:three_prime_UTR
CCTAACAGGTAGAGGCTTAT+TGG 0.279715 tig0022494:-84012 None:intergenic
AAATGATTATCAATTAATTA+AGG 0.283591 tig0022494:+81882 Msa1400970:CDS
TCGATATCACATACCTTTAG+AGG 0.285448 tig0022494:-84065 None:intergenic
TTTACACGTCTTTGACTTCT+TGG 0.292008 tig0022494:+82246 Msa1400970:three_prime_UTR
TTCTCCATATTCTCAATAAA+AGG 0.292427 tig0022494:-81622 None:intergenic
TTTGTGTATTATAGATTTCA+TGG 0.296490 tig0022494:-86512 None:intergenic
GCTGTGGCTTCTGGATCATC+TGG 0.307175 tig0022494:+81847 Msa1400970:CDS
TTGCATCCTATCGTTCATTA+TGG 0.313107 tig0022494:+86361 Msa1400970:three_prime_UTR
TGGGGAAAGAATCTCGTATT+TGG 0.319163 tig0022494:+85835 Msa1400970:three_prime_UTR
CAATGCCGTATGACAGATTA+AGG 0.325118 tig0022494:-81997 None:intergenic
TGATTTACATATCTAAAGTT+TGG 0.332612 tig0022494:+82201 Msa1400970:three_prime_UTR
GTACTTGGTGCAGAAAATTC+AGG 0.337976 tig0022494:+82223 Msa1400970:three_prime_UTR
CCCCTAGCGCAGAGAGATTA+CGG 0.344115 tig0022494:-86323 None:intergenic
GAATTCTTGGCTTATCTTGA+AGG 0.350640 tig0022494:+82376 Msa1400970:three_prime_UTR
TATTCATGATATAAGATGTT+TGG 0.353453 tig0022494:+83612 Msa1400970:three_prime_UTR
ACTGTTGGCTAGGTCATTTA+TGG 0.356342 tig0022494:+82128 Msa1400970:three_prime_UTR
GTATCTCTGTTGGAGAGTTT+GGG 0.359975 tig0022494:+83025 Msa1400970:three_prime_UTR
CTTACTGATTCAAGGACATC+TGG 0.364506 tig0022494:-83694 None:intergenic
TACGTTTCATGTTGTTTCTA+AGG 0.364645 tig0022494:+80145 Msa1400970:CDS
GAGAAGATTGAACAGTTTAG+AGG 0.366538 tig0022494:+80029 Msa1400970:CDS
AGACGAGCAGGGACAAGTTC+TGG 0.377622 tig0022494:+86092 Msa1400970:three_prime_UTR
TGATTGATTGCTTTCTTGCT+TGG 0.378699 tig0022494:+86465 Msa1400970:three_prime_UTR
TACAAGGATAAAGTCATCTA+TGG 0.388281 tig0022494:-83297 None:intergenic
GATCTGTGATGCGCTGGAAC+TGG 0.392381 tig0022494:-79720 None:intergenic
CATATCTAAAGTTTGGTACT+TGG 0.394003 tig0022494:+82208 Msa1400970:three_prime_UTR
TAAAGGTTCTAAAGATTTCA+AGG 0.396291 tig0022494:-83743 None:intergenic
ACAGAAACCCCATTGCTTGA+TGG 0.396330 tig0022494:-80970 None:intergenic
GCACCGGCACTGGGCGCGGA+TGG 0.398104 tig0022494:+83261 Msa1400970:three_prime_UTR
TACTCAACTTGGCTGTCATC+TGG 0.400690 tig0022494:+83209 Msa1400970:three_prime_UTR
GGGAACGAAGGTTCGGAGTT+CGG 0.406934 tig0022494:-79841 None:intergenic
TGCTCTGCCTTACTGATTCA+AGG 0.414153 tig0022494:-83702 None:intergenic
TTGGGACATTGCTTTGTAGA+TGG 0.416385 tig0022494:+81682 Msa1400970:CDS
TAGCAAAGAGAACCTCTCTA+AGG 0.419095 tig0022494:-82279 None:intergenic
ACATATGGTGAGTGCCTAAC+AGG 0.419399 tig0022494:-84026 None:intergenic
TCGCTTGTTGCTATAAAGAA+TGG 0.419457 tig0022494:+80065 Msa1400970:CDS
TGCTTCTGCCAGAGAGACTT+TGG 0.423425 tig0022494:+80109 Msa1400970:CDS
CTTCTGGATCATCTGGGGAT+GGG 0.425767 tig0022494:+81854 Msa1400970:CDS
TTATTGGATATTTCTTCAGC+TGG 0.426378 tig0022494:+81931 Msa1400970:CDS
GGTTCGGAGTTCGGAAATGT+AGG 0.427307 tig0022494:-79832 None:intergenic
AGGGGATAACAGCAACTTAC+AGG 0.428355 tig0022494:+83985 Msa1400970:three_prime_UTR
CACCGGCACTGGGCGCGGAT+GGG 0.429040 tig0022494:+83262 Msa1400970:three_prime_UTR
CTTTAGATATGTAAATCAAA+TGG 0.430979 tig0022494:-82196 None:intergenic
TTCATGAAACAATGGAATCT+TGG 0.432373 tig0022494:+82783 Msa1400970:three_prime_UTR
ATGACAGATTAAGGCTCATA+TGG 0.432475 tig0022494:-81988 None:intergenic
AGTGTCAGACACATTATTAT+CGG 0.433834 tig0022494:-86120 None:intergenic
TAGGATTCGGAATCGAAGTC+AGG 0.434014 tig0022494:-79813 None:intergenic
GCTTCTGGATCATCTGGGGA+TGG 0.434437 tig0022494:+81853 Msa1400970:CDS
CCAATAAGCCTCTACCTGTT+AGG 0.434691 tig0022494:+84012 Msa1400970:three_prime_UTR
GCAGGTTGAGAAACTGATAA+AGG 0.436709 tig0022494:+80888 Msa1400970:intron
CGTAATACTCCCGCAACATA+TGG 0.437801 tig0022494:-84041 None:intergenic
GAGTTCGGAAATGTAGGATT+CGG 0.447772 tig0022494:-79826 None:intergenic
AGCCCATCCGCGCCCAGTGC+CGG 0.448180 tig0022494:-83264 None:intergenic
CACTCGACTCTCATCCTCTC+TGG 0.455521 tig0022494:+79766 Msa1400970:CDS
CATAATACAAGCACCGGCAC+TGG 0.455710 tig0022494:+83251 Msa1400970:three_prime_UTR
CTGTGGCTTCTGGATCATCT+GGG 0.456402 tig0022494:+81848 Msa1400970:CDS
CAAAGCAGTGGTGGAGTCAC+TGG 0.456978 tig0022494:+83771 Msa1400970:three_prime_UTR
CCAAGCTTGCATCTACTAGT+AGG 0.459602 tig0022494:-81663 None:intergenic
GAATTGCCAGTGAGATGAAC+CGG 0.462260 tig0022494:+81049 Msa1400970:CDS
ACAAGCACCGGCACTGGGCG+CGG 0.462642 tig0022494:+83257 Msa1400970:three_prime_UTR
TCTATAATACACAAATTAGT+TGG 0.463359 tig0022494:+86520 Msa1400970:three_prime_UTR
CCCGTAATCTCTCTGCGCTA+GGG 0.463689 tig0022494:+86322 Msa1400970:three_prime_UTR
TCTGTGCAGCAAGTTGAGAA+TGG 0.465124 tig0022494:+80988 Msa1400970:CDS
AAGAAGCTCCAAAGTCTCTC+TGG 0.469395 tig0022494:-80117 None:intergenic
TGGAGAGTTTGGGATTGTGC+TGG 0.471494 tig0022494:+83035 Msa1400970:three_prime_UTR
GGGATAATCTTCTGTATCAA+TGG 0.471575 tig0022494:-81811 None:intergenic
GTACCCTCTGACTGGTCAAA+TGG 0.472322 tig0022494:+80922 Msa1400970:CDS
ACCACTGCTTTGATGACTAA+AGG 0.473079 tig0022494:-83760 None:intergenic
AGGCACTCACCATATGTTGC+GGG 0.475407 tig0022494:+84032 Msa1400970:three_prime_UTR
CTGTGCAGCAAGTTGAGAAT+GGG 0.476048 tig0022494:+80989 Msa1400970:CDS
CTCAGGTTTCAGGAAATAGC+AGG 0.477309 tig0022494:+82905 Msa1400970:intron
CTTAATCTGTCATACGGCAT+TGG 0.480275 tig0022494:+81998 Msa1400970:three_prime_UTR
TCTTGATAATTTGCTTCGCC+AGG 0.482279 tig0022494:-82983 None:intergenic
CCTACTAGTAGATGCAAGCT+TGG 0.482775 tig0022494:+81663 Msa1400970:CDS
ATCGAAGTCAGGGGAGAGGA+AGG 0.486252 tig0022494:-79802 None:intergenic
CCCTAGCGCAGAGAGATTAC+GGG 0.489238 tig0022494:-86322 None:intergenic
TCAGGGGAGAGGAAGGAGGT+AGG 0.492137 tig0022494:-79795 None:intergenic
AGGAATGCCTCAGCAAGGAC+TGG 0.492489 tig0022494:-82035 None:intergenic
TGTTGATGTGGATGCGGCGG+TGG 0.493207 tig0022494:+79974 Msa1400970:CDS
AGAGACTCAAAGTATGCTGC+TGG 0.494446 tig0022494:+81023 Msa1400970:CDS
CTTTAGCCGGTTCATCTCAC+TGG 0.496358 tig0022494:-81055 None:intergenic
TGTCAAAGGGAACGAAGGTT+CGG 0.498537 tig0022494:-79848 None:intergenic
CAGAGTGCACAGAGACGAGC+AGG 0.501222 tig0022494:+86080 Msa1400970:three_prime_UTR
AAAACAAAGTGTATCTCTGT+TGG 0.501400 tig0022494:+83015 Msa1400970:three_prime_UTR
TTGTAGATGGTCTAGAACAC+CGG 0.501648 tig0022494:+81695 Msa1400970:CDS
CCCACATGGGTCATCGGCTG+TGG 0.503279 tig0022494:+81831 Msa1400970:CDS
TACTACATGTACTGTTGGCT+AGG 0.504394 tig0022494:+82118 Msa1400970:three_prime_UTR
AACCTGTGATTATTGTGTAA+AGG 0.505423 tig0022494:-86543 None:intergenic
GGAACTTGTCAGAACAAGAA+AGG 0.506894 tig0022494:-83075 None:intergenic
CTAGGACTTGAGACAGATGA+AGG 0.507871 tig0022494:+83965 Msa1400970:intron
TTCCGATCGGAGTGTGTCAA+AGG 0.511209 tig0022494:-79862 None:intergenic
TGCCTAGTGTACCCTCTGAC+TGG 0.511263 tig0022494:+80914 Msa1400970:CDS
GCCCGTAATCTCTCTGCGCT+AGG 0.511320 tig0022494:+86321 Msa1400970:three_prime_UTR
TCATGATATAAGATGTTTGG+AGG 0.514413 tig0022494:+83615 Msa1400970:three_prime_UTR
TGCGCCACTTGTGGAGTTGA+GGG 0.515430 tig0022494:+80007 Msa1400970:CDS
CCTGTCCAAAATTTAGATCC+TGG 0.519380 tig0022494:+82965 Msa1400970:three_prime_UTR
CTTCCAACAGAAAATGCACC+TGG 0.524423 tig0022494:-82316 None:intergenic
GGTTCTCTTTGCTATTCAGA+AGG 0.526000 tig0022494:+82288 Msa1400970:three_prime_UTR
ATGTTGTTCTGCCTATCTGC+TGG 0.527559 tig0022494:-86396 None:intergenic
CAGATGTCCTTGAATCAGTA+AGG 0.528406 tig0022494:+83695 Msa1400970:three_prime_UTR
GTGCGCCACTTGTGGAGTTG+AGG 0.529143 tig0022494:+80006 Msa1400970:CDS
GCGGATGCGTGCGCCACTTG+TGG 0.531183 tig0022494:+79998 Msa1400970:CDS
CCATATTCTCAATAAAAGGC+AGG 0.533344 tig0022494:-81618 None:intergenic
ATTCCATTGTTTCATGAACT+CGG 0.535062 tig0022494:-82778 None:intergenic
TGTAAATTGCAGTTGCATCC+CGG 0.537246 tig0022494:-81714 None:intergenic
TAGAAAGAAGCTGCAAGGAT+AGG 0.547718 tig0022494:-83102 None:intergenic
TTCTCCCTCAACTCCACAAG+TGG 0.548566 tig0022494:-80011 None:intergenic
GCTATTCAGAAGGGAAAGCC+AGG 0.549216 tig0022494:+82298 Msa1400970:three_prime_UTR
GGGAGTATTACGTCCTCTAA+AGG 0.549333 tig0022494:+84052 Msa1400970:three_prime_UTR
TGTTTGGAGGCGCATGTTCG+TGG 0.549872 tig0022494:+83628 Msa1400970:three_prime_UTR
GTGGTGGATCTGTGATGCGC+TGG 0.550028 tig0022494:-79726 None:intergenic
GGCTCATATGGATCCTAAAG+TGG 0.550712 tig0022494:-81976 None:intergenic
AAATGGAGATGTGAATTTGT+CGG 0.550788 tig0022494:+80939 Msa1400970:CDS
AGCTGCCGACCTTGTTACTA+CGG 0.551500 tig0022494:+85925 Msa1400970:three_prime_UTR
TTACTGATTCAAGGACATCT+GGG 0.552406 tig0022494:-83693 None:intergenic
TCCCTTTGACACACTCCGAT+CGG 0.554706 tig0022494:+79860 Msa1400970:CDS
CTACTAGTAGATGCAAGCTT+GGG 0.555531 tig0022494:+81664 Msa1400970:CDS
ATGAGCCTTAATCTGTCATA+CGG 0.556759 tig0022494:+81992 Msa1400970:three_prime_UTR
TCCGATCGGAGTGTGTCAAA+GGG 0.557122 tig0022494:-79861 None:intergenic
GTTCTCTTTGCTATTCAGAA+GGG 0.558787 tig0022494:+82289 Msa1400970:three_prime_UTR
GAACTTGTCAGAACAAGAAA+GGG 0.560737 tig0022494:-83074 None:intergenic
TCATGCCTACCTGAATATCA+AGG 0.561958 tig0022494:-86166 None:intergenic
TTGGTTGTGAGTAGTCAAGA+AGG 0.562668 tig0022494:+86030 Msa1400970:intron
GATTATCCCACATGGGTCAT+CGG 0.563051 tig0022494:+81825 Msa1400970:CDS
GATAGTTGTTTAGTTCCGAT+CGG 0.564647 tig0022494:-79875 None:intergenic
AGTCGAGTGGATCGGAGAAG+AGG 0.565471 tig0022494:-79752 None:intergenic
CGGAATCGAAGTCAGGGGAG+AGG 0.567976 tig0022494:-79806 None:intergenic
GTCATTTATGGTCATGCATG+TGG 0.568198 tig0022494:+82140 Msa1400970:three_prime_UTR
TTATTGAGAATATGGAGAAG+AGG 0.569360 tig0022494:+81626 Msa1400970:CDS
GAACTTACAGATACTCAACT+TGG 0.571437 tig0022494:+83198 Msa1400970:intron
GAGTACAAAGCTTGTTGATG+TGG 0.573440 tig0022494:+79962 Msa1400970:intron
ATGTGGATGCGGCGGTGGTG+CGG 0.574007 tig0022494:+79979 Msa1400970:CDS
CGGCAGCTAATTCATAATAA+CGG 0.574795 tig0022494:-85910 None:intergenic
GGTGAGTGCCTAACAGGTAG+AGG 0.576101 tig0022494:-84020 None:intergenic
ATAATACAAGCACCGGCACT+GGG 0.576760 tig0022494:+83252 Msa1400970:three_prime_UTR
AGTGTGTGGCTCCAGCAGAT+AGG 0.580457 tig0022494:+86385 Msa1400970:three_prime_UTR
AAGAGTCATAATACAAGCAC+CGG 0.580920 tig0022494:+83245 Msa1400970:three_prime_UTR
TGGATCGGAGAAGAGGTTTG+TGG 0.581693 tig0022494:-79745 None:intergenic
TAACGAAATCAGCGTAGTCG+CGG 0.581913 tig0022494:-79935 None:intergenic
GACCATGCCAGTCCTTGCTG+AGG 0.590713 tig0022494:+82028 Msa1400970:three_prime_UTR
TAGGACTTGAGACAGATGAA+GGG 0.594345 tig0022494:+83966 Msa1400970:intron
AGGATTCGGAATCGAAGTCA+GGG 0.595821 tig0022494:-79812 None:intergenic
GTGTAACATAGAACTTTAGC+CGG 0.596405 tig0022494:-81068 None:intergenic
TGTCATCTGGACTGACTGCA+CGG 0.597412 tig0022494:+83222 Msa1400970:three_prime_UTR
GACTGAGGAATGCCTCAGCA+AGG 0.602292 tig0022494:-82040 None:intergenic
AAAGCTTGTTGATGTGGATG+CGG 0.606209 tig0022494:+79968 Msa1400970:intron
CCGTAATCTCTCTGCGCTAG+GGG 0.606581 tig0022494:+86323 Msa1400970:three_prime_UTR
AGGATGAGAGTCGAGTGGAT+CGG 0.607673 tig0022494:-79760 None:intergenic
GGCCAACTCAATCCTTAGAG+AGG 0.608097 tig0022494:+82267 Msa1400970:three_prime_UTR
GGATTCTTACCGTAGTAACA+AGG 0.608299 tig0022494:-85934 None:intergenic
TATGTAAGCATGATATATGT+TGG 0.609353 tig0022494:-82168 None:intergenic
TGTAGATGGTCTAGAACACC+GGG 0.610117 tig0022494:+81696 Msa1400970:CDS
TAGGCACTCACCATATGTTG+CGG 0.611203 tig0022494:+84031 Msa1400970:three_prime_UTR
ACACTGCCATAATGAACGAT+AGG 0.612354 tig0022494:-86367 None:intergenic
GTTCTATGTTACACATGCGA+AGG 0.615933 tig0022494:+81077 Msa1400970:CDS
ACCTTTAGTCATCAAAGCAG+TGG 0.619868 tig0022494:+83759 Msa1400970:three_prime_UTR
AACCTCTCTAAGGATTGAGT+TGG 0.619915 tig0022494:-82269 None:intergenic
AGCAGTGGTGGAGTCACTGG+TGG 0.621318 tig0022494:+83774 Msa1400970:three_prime_UTR
TGACCTAGAAAGAAGCTGCA+AGG 0.627082 tig0022494:-83107 None:intergenic
ATCTCCATTTGACCAGTCAG+AGG 0.627867 tig0022494:-80926 None:intergenic
AGGACTTGAGACAGATGAAG+GGG 0.628043 tig0022494:+83967 Msa1400970:intron
TGCCTCAGCAAGGACTGGCA+TGG 0.630656 tig0022494:-82030 None:intergenic
CAGAGAGGATGAGAGTCGAG+TGG 0.630921 tig0022494:-79765 None:intergenic
TCGTTCATTATGGCAGTGTG+TGG 0.633355 tig0022494:+86371 Msa1400970:three_prime_UTR
TTAAAGACCAAGAAGGACTG+AGG 0.633455 tig0022494:-82055 None:intergenic
GACCAGTCAGAGGGTACACT+AGG 0.634073 tig0022494:-80916 None:intergenic
GAAGTCAGGGGAGAGGAAGG+AGG 0.634937 tig0022494:-79799 None:intergenic
ATCGGAGAAGAGGTTTGTGG+TGG 0.637272 tig0022494:-79742 None:intergenic
AGAGTGCACAGAGACGAGCA+GGG 0.639547 tig0022494:+86081 Msa1400970:three_prime_UTR
TTCAGATCGAAATTTAGCAA+CGG 0.642219 tig0022494:-82745 None:intergenic
TAATGTCAGTTGCTGCACAA+AGG 0.646127 tig0022494:-85883 None:intergenic
TGTGGCTTCTGGATCATCTG+GGG 0.646745 tig0022494:+81849 Msa1400970:CDS
ATACCGAGTTCATGAAACAA+TGG 0.647055 tig0022494:+82775 Msa1400970:three_prime_UTR
GAAGCTGCAAGGATAGGCGA+AGG 0.650298 tig0022494:-83096 None:intergenic
TCTCCATTTGACCAGTCAGA+GGG 0.651774 tig0022494:-80925 None:intergenic
TGGTGATTACTTACAACACG+TGG 0.655831 tig0022494:+83648 Msa1400970:three_prime_UTR
CCACAGCCGATGACCCATGT+GGG 0.659813 tig0022494:-81831 None:intergenic
TTTAGTCATCAAAGCAGTGG+TGG 0.660509 tig0022494:+83762 Msa1400970:three_prime_UTR
TTAGCAACGGCAGATCTAGA+CGG 0.664456 tig0022494:-82732 None:intergenic
TACTGATTCAAGGACATCTG+GGG 0.668471 tig0022494:-83692 None:intergenic
GCTTGTTGATGTGGATGCGG+CGG 0.668676 tig0022494:+79971 Msa1400970:intron
TCAGGTTTCAGGAAATAGCA+GGG 0.674198 tig0022494:+82906 Msa1400970:intron
GAGGTAGGTTTGAACCAGAG+AGG 0.675259 tig0022494:-79780 None:intergenic
TACAGAAGATTATCCCACAT+GGG 0.675357 tig0022494:+81818 Msa1400970:CDS
ATACAGAAGATTATCCCACA+TGG 0.676793 tig0022494:+81817 Msa1400970:CDS
GCCACAGCCGATGACCCATG+TGG 0.679855 tig0022494:-81832 None:intergenic
GAGTGTGTCAAAGGGAACGA+AGG 0.680732 tig0022494:-79853 None:intergenic
TCTTACCGTAGTAACAAGGT+CGG 0.694276 tig0022494:-85930 None:intergenic
GGATTCGGAATCGAAGTCAG+GGG 0.705890 tig0022494:-79811 None:intergenic
TTGCACGTGTGGAGTCAACG+TGG 0.722911 tig0022494:+86433 Msa1400970:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAATTCATCAAATATAAT+TGG + tig0022494:80220-80239 Msa1400970:intron 10.0%
!! GATTAAAAAAAAAACAAAAA+TGG - tig0022494:81121-81140 None:intergenic 10.0%
!!! TACTCAAATTATAATATTTT+AGG + tig0022494:81468-81487 Msa1400970:intron 10.0%
!! AAATGATTATCAATTAATTA+AGG + tig0022494:81882-81901 Msa1400970:CDS 10.0%
!! AAAATTTATTACTAATATAG+GGG - tig0022494:84338-84357 None:intergenic 10.0%
!!! TTTTTTTTTAGAAAAAAGAT+CGG + tig0022494:85061-85080 Msa1400970:intron 10.0%
!! GTTGTTTAATTATAAAAATT+TGG - tig0022494:85378-85397 None:intergenic 10.0%
!!! TTATTATGCTATTGTTTTTT+AGG + tig0022494:80554-80573 Msa1400970:intron 15.0%
!!! CAAAAAAGTGAATTTTATTA+TGG - tig0022494:80788-80807 None:intergenic 15.0%
!!! ATAAAATTCACTTTTTTGAA+AGG + tig0022494:80790-80809 Msa1400970:intron 15.0%
!!! TTTTTATTTTGCATTGATTT+TGG + tig0022494:80816-80835 Msa1400970:intron 15.0%
!! GATCAAATTTATAAATTAGT+TGG + tig0022494:81219-81238 Msa1400970:intron 15.0%
!!! TTCTGAAAGTAAAAAAATAA+AGG + tig0022494:81384-81403 Msa1400970:intron 15.0%
!!! TAAAGACTGTAAATTTTTAT+TGG + tig0022494:81915-81934 Msa1400970:CDS 15.0%
!! ACAATGAATATTCATTAAAT+TGG + tig0022494:83825-83844 Msa1400970:intron 15.0%
!! AAATTTATTACTAATATAGG+GGG - tig0022494:84337-84356 None:intergenic 15.0%
!!! TTTTTAATCTTTAAAGAAAG+AGG + tig0022494:84562-84581 Msa1400970:intron 15.0%
!!! AAATGCTTTTTGTTAAATTT+TGG + tig0022494:84837-84856 Msa1400970:intron 15.0%
!!! TTAATGAAATTTTTATCTCT+TGG + tig0022494:85982-86001 Msa1400970:intron 15.0%
!! AAAAATTCATTTCAAAATCA+AGG - tig0022494:86224-86243 None:intergenic 15.0%
!! AAAAAAAAAAAAAACAGGTT+CGG - tig0022494:86685-86704 None:intergenic 15.0%
!!! CCTGTTTTTTTTTTTTTTTT+CGG + tig0022494:86687-86706 Msa1400970:three_prime_UTR 15.0%
!! TAAGCAAGAAAGATAAAAAT+CGG - tig0022494:80179-80198 None:intergenic 20.0%
!!! TATATAGATTTTGTACAATG+TGG + tig0022494:80446-80465 Msa1400970:intron 20.0%
!! TTCAAGTATTCAACAAAAAT+GGG - tig0022494:81169-81188 None:intergenic 20.0%
!! ATTCAAGTATTCAACAAAAA+TGG - tig0022494:81170-81189 None:intergenic 20.0%
!! TTTAGTTATTATACATAACC+AGG + tig0022494:81492-81511 Msa1400970:intron 20.0%
!! TAAACACAAACAGTAAATTA+CGG - tig0022494:81528-81547 None:intergenic 20.0%
!! TGTAGTAAAAAAATGTGAAA+GGG - tig0022494:82105-82124 None:intergenic 20.0%
!! ATGTAGTAAAAAAATGTGAA+AGG - tig0022494:82106-82125 None:intergenic 20.0%
!! CTTTAGATATGTAAATCAAA+TGG - tig0022494:82199-82218 None:intergenic 20.0%
!!! TGATTTACATATCTAAAGTT+TGG + tig0022494:82201-82220 Msa1400970:three_prime_UTR 20.0%
!!! TTCATTTTTTTTGTTTCTCA+AGG - tig0022494:82440-82459 None:intergenic 20.0%
!!! TTTTTCTATGTTAGATCTAA+TGG + tig0022494:80246-80265 Msa1400970:intron 20.0%
!!! ACATTTTCTTGATAATCAAA+TGG - tig0022494:82581-82600 None:intergenic 20.0%
!! ATTTGATTATCAAGAAAATG+TGG + tig0022494:82580-82599 Msa1400970:intron 20.0%
!! TACATACAAAAACAAAGTAA+AGG - tig0022494:83332-83351 None:intergenic 20.0%
!! TATTCATGATATAAGATGTT+TGG + tig0022494:83612-83631 Msa1400970:three_prime_UTR 20.0%
!!! AAAAATATGAATAAGTTGGA+AGG - tig0022494:83929-83948 None:intergenic 20.0%
!! AAGCAAAAATATGAATAAGT+TGG - tig0022494:83933-83952 None:intergenic 20.0%
!! TTAAATACCCCAAATATAAA+AGG + tig0022494:84619-84638 Msa1400970:intron 20.0%
!!! ATGCCAAAAATTGTTTTAAA+CGG - tig0022494:84748-84767 None:intergenic 20.0%
!!! AATCATTTGTTGAATAACAA+TGG + tig0022494:84971-84990 Msa1400970:intron 20.0%
!!! ATCATTTGTTGAATAACAAT+GGG + tig0022494:84972-84991 Msa1400970:intron 20.0%
!! TTAAATACCGTAAAAAACTT+GGG - tig0022494:85236-85255 None:intergenic 20.0%
!!! AATGATGATTCTTTCTTTTT+GGG - tig0022494:85510-85529 None:intergenic 20.0%
!! ATGAAAAATGGAAAGATAAA+TGG + tig0022494:85659-85678 Msa1400970:intron 20.0%
!!! ATACATAACTCAACTTTTTT+GGG - tig0022494:85745-85764 None:intergenic 20.0%
!!! AATACATAACTCAACTTTTT+TGG - tig0022494:85746-85765 None:intergenic 20.0%
!!! TGATAATGCTTAAGAAATTT+TGG + tig0022494:86011-86030 Msa1400970:intron 20.0%
!! TTTGTGTATTATAGATTTCA+TGG - tig0022494:86515-86534 None:intergenic 20.0%
!! TCTATAATACACAAATTAGT+TGG + tig0022494:86520-86539 Msa1400970:three_prime_UTR 20.0%
!! CCGAAAAAAAAAAAAAAAAC+AGG - tig0022494:86690-86709 None:intergenic 20.0%
!! ATAATCGCTTGATAATCAAA+TGG - tig0022494:80280-80299 None:intergenic 25.0%
! TACATAGACTTACTTTAATG+CGG + tig0022494:80509-80528 Msa1400970:intron 25.0%
!!! GTTGTTTATTTTGTCAATGA+AGG + tig0022494:80639-80658 Msa1400970:intron 25.0%
!!! AATGAAGGTTTCTAAAATTG+AGG + tig0022494:80654-80673 Msa1400970:intron 25.0%
!!! ATGAAGGTTTCTAAAATTGA+GGG + tig0022494:80655-80674 Msa1400970:intron 25.0%
! ATCATCTGTACATTATGTTA+TGG + tig0022494:80686-80705 Msa1400970:intron 25.0%
! TCATCTGTACATTATGTTAT+GGG + tig0022494:80687-80706 Msa1400970:intron 25.0%
!!! TTGCATTGATTTTGGAAATT+TGG + tig0022494:80824-80843 Msa1400970:intron 25.0%
!!! TGCATTGATTTTGGAAATTT+GGG + tig0022494:80825-80844 Msa1400970:intron 25.0%
! AAAAAATAAAGGAACCTGAA+AGG + tig0022494:81395-81414 Msa1400970:intron 25.0%
! AAAAATAAAGGAACCTGAAA+GGG + tig0022494:81396-81415 Msa1400970:intron 25.0%
! ATCTATAAATTTCCTGAACA+TGG - tig0022494:81443-81462 None:intergenic 25.0%
! TTCTCCATATTCTCAATAAA+AGG - tig0022494:81625-81644 None:intergenic 25.0%
!! AAAAGTTTCTTCTGCATTTT+TGG - tig0022494:81773-81792 None:intergenic 25.0%
!!! TAACTTTTTCTTACCACTTT+AGG + tig0022494:81963-81982 Msa1400970:CDS 25.0%
!!! CTTTTATTTAAAGACCAAGA+AGG - tig0022494:82065-82084 None:intergenic 25.0%
! GTAGTAAAAAAATGTGAAAG+GGG - tig0022494:82104-82123 None:intergenic 25.0%
!!! TTTTTTACTACATGTACTGT+TGG + tig0022494:82113-82132 Msa1400970:three_prime_UTR 25.0%
! TATGTAAGCATGATATATGT+TGG - tig0022494:82171-82190 None:intergenic 25.0%
!!! TAATTTTTCAAGAACTCTGT+TGG - tig0022494:82343-82362 None:intergenic 25.0%
! GAAAAATTACAAATCAAGCT+TGG + tig0022494:82354-82373 Msa1400970:three_prime_UTR 25.0%
! AAGTTAATTGTACTTTGAGT+TGG + tig0022494:82459-82478 Msa1400970:intron 25.0%
!! ATGTCATTTAATTTCATGCA+AGG + tig0022494:82702-82721 Msa1400970:intron 25.0%
! TATCTGTAAGTTCAAAAAAG+AGG - tig0022494:83191-83210 None:intergenic 25.0%
!!! ACACAATTGTTATTTCATCA+TGG - tig0022494:83508-83527 None:intergenic 25.0%
!!! TAAAGGTTCTAAAGATTTCA+AGG - tig0022494:83746-83765 None:intergenic 25.0%
!! TGTGATATCGATTAAGTTTA+TGG + tig0022494:84077-84096 Msa1400970:intron 25.0%
!! TAGAGAAAGCTTTAACATTT+AGG + tig0022494:84214-84233 Msa1400970:intron 25.0%
!! TTCCTACTCCTTTTATATTT+GGG - tig0022494:84630-84649 None:intergenic 25.0%
!!! ATGCCGTTTAAAACAATTTT+TGG + tig0022494:84742-84761 Msa1400970:intron 25.0%
!!! TTCTTACTCCATTTTTCTTT+GGG - tig0022494:84786-84805 None:intergenic 25.0%
!!! ATTCTTACTCCATTTTTCTT+TGG - tig0022494:84787-84806 None:intergenic 25.0%
! AAAATGGAGTAAGAATCTAA+AGG + tig0022494:84791-84810 Msa1400970:intron 25.0%
! AAATGGAGTAAGAATCTAAA+GGG + tig0022494:84792-84811 Msa1400970:intron 25.0%
!!! TTAACAAAAAGCATTTGTGT+GGG - tig0022494:84833-84852 None:intergenic 25.0%
!!! TTTAACAAAAAGCATTTGTG+TGG - tig0022494:84834-84853 None:intergenic 25.0%
!!! TGCTTTTTGTTAAATTTTGG+TGG + tig0022494:84840-84859 Msa1400970:intron 25.0%
!!! GCTTTTTGTTAAATTTTGGT+GGG + tig0022494:84841-84860 Msa1400970:intron 25.0%
!! AGGCATTAAAATTTCACTTT+TGG + tig0022494:84876-84895 Msa1400970:intron 25.0%
!! TGAATAACAATGGGTATTTT+TGG + tig0022494:84981-85000 Msa1400970:intron 25.0%
!!! GGTATTTTTGGAATATAAAG+TGG + tig0022494:84993-85012 Msa1400970:intron 25.0%
!!! TTTTTTAGAAAAAAGATCGG+AGG + tig0022494:85064-85083 Msa1400970:intron 25.0%
!!! TTTTTAGAAAAAAGATCGGA+GGG + tig0022494:85065-85084 Msa1400970:intron 25.0%
! AAAATACAGTAGTCAGTTTA+TGG - tig0022494:85191-85210 None:intergenic 25.0%
! GTTAAATACCGTAAAAAACT+TGG - tig0022494:85237-85256 None:intergenic 25.0%
! GGTATTTAACAACTATTGTT+AGG + tig0022494:85247-85266 Msa1400970:intron 25.0%
! ATTTAACAACTATTGTTAGG+TGG + tig0022494:85250-85269 Msa1400970:intron 25.0%
! TTTAACAACTATTGTTAGGT+GGG + tig0022494:85251-85270 Msa1400970:intron 25.0%
! TGATTACTACATGTTCATTT+AGG + tig0022494:85307-85326 Msa1400970:intron 25.0%
! ATTAAACAACTATTGTTGTG+TGG + tig0022494:85388-85407 Msa1400970:intron 25.0%
! TTAAACAACTATTGTTGTGT+GGG + tig0022494:85389-85408 Msa1400970:intron 25.0%
! TACTCGTTATTATGATCTAT+TGG + tig0022494:85413-85432 Msa1400970:intron 25.0%
!! CAATGATGATTCTTTCTTTT+TGG - tig0022494:85511-85530 None:intergenic 25.0%
! AAATTGAATCCAATCTGATA+TGG + tig0022494:85580-85599 Msa1400970:intron 25.0%
!!! TTTGGTTTCCTATTTTAAGA+GGG - tig0022494:85703-85722 None:intergenic 25.0%
!!! TTTTGGTTTCCTATTTTAAG+AGG - tig0022494:85704-85723 None:intergenic 25.0%
! CATTAATGTAGTCTCTATAT+TGG + tig0022494:85791-85810 Msa1400970:intron 25.0%
!!! ACAAAGGAGTATTTCATTTT+TGG - tig0022494:85870-85889 None:intergenic 25.0%
! GTAATTTCATCAAAGTAGTT+TGG - tig0022494:85958-85977 None:intergenic 25.0%
!!! TATCTAAAAGAAAGCATTCA+CGG - tig0022494:86266-86285 None:intergenic 25.0%
! AGGAGAACCTAAAATATAAA+GGG - tig0022494:86588-86607 None:intergenic 25.0%
! AAGGAGAACCTAAAATATAA+AGG - tig0022494:86589-86608 None:intergenic 25.0%
!! TACGTTTCATGTTGTTTCTA+AGG + tig0022494:80145-80164 Msa1400970:CDS 30.0%
! GCAAATATGTGTTGTTATGT+CGG + tig0022494:80388-80407 Msa1400970:intron 30.0%
! AGATTTTGTACAATGTGGTA+TGG + tig0022494:80451-80470 Msa1400970:intron 30.0%
!!! TAGGTTAACTTGTGTAGTTT+TGG + tig0022494:80573-80592 Msa1400970:intron 30.0%
!!! AGGTTAACTTGTGTAGTTTT+GGG + tig0022494:80574-80593 Msa1400970:intron 30.0%
!! TGAAGGTTTCTAAAATTGAG+GGG + tig0022494:80656-80675 Msa1400970:intron 30.0%
!!! GCATTGATTTTGGAAATTTG+GGG + tig0022494:80826-80845 Msa1400970:intron 30.0%
AAATGGAGATGTGAATTTGT+CGG + tig0022494:80939-80958 Msa1400970:CDS 30.0%
AGAAAAATCCATCAAGCAAT+GGG + tig0022494:80962-80981 Msa1400970:CDS 30.0%
! ATATACCATTTTGCAAGCTA+CGG + tig0022494:81307-81326 Msa1400970:intron 30.0%
TCAGAATGCTAATTAATCAG+TGG - tig0022494:81370-81389 None:intergenic 30.0%
TTATTGAGAATATGGAGAAG+AGG + tig0022494:81626-81645 Msa1400970:CDS 30.0%
!!! TGCATTTTTGGTGTTATCAA+TGG - tig0022494:81761-81780 None:intergenic 30.0%
TTATTGGATATTTCTTCAGC+TGG + tig0022494:81931-81950 Msa1400970:CDS 30.0%
TGGTAAGAAAAAGTTAGATG+AGG - tig0022494:81959-81978 None:intergenic 30.0%
! CATATCTAAAGTTTGGTACT+TGG + tig0022494:82208-82227 Msa1400970:three_prime_UTR 30.0%
AAGGTGAAAAGTAAGATTAG+CGG - tig0022494:82421-82440 None:intergenic 30.0%
TTCAGATCGAAATTTAGCAA+CGG - tig0022494:82748-82767 None:intergenic 30.0%
ATTCCATTGTTTCATGAACT+CGG - tig0022494:82781-82800 None:intergenic 30.0%
TTCATGAAACAATGGAATCT+TGG + tig0022494:82783-82802 Msa1400970:three_prime_UTR 30.0%
TACCTGAATTATTAGCGATA+TGG + tig0022494:82863-82882 Msa1400970:intron 30.0%
ATCCATATCGCTAATAATTC+AGG - tig0022494:82868-82887 None:intergenic 30.0%
AAAACAAAGTGTATCTCTGT+TGG + tig0022494:83015-83034 Msa1400970:three_prime_UTR 30.0%
TGTAAGTTCAAAAAAGAGGT+TGG - tig0022494:83187-83206 None:intergenic 30.0%
TACAAGGATAAAGTCATCTA+TGG - tig0022494:83300-83319 None:intergenic 30.0%
TGAAGACTTGAAGTAAATCT+AGG + tig0022494:83381-83400 Msa1400970:intron 30.0%
! TTTTGAACCAAATCCTCAAA+CGG - tig0022494:83477-83496 None:intergenic 30.0%
! GAGGATTTGGTTCAAAAAAA+TGG + tig0022494:83480-83499 Msa1400970:intron 30.0%
! ATATCCTCATTTTGCATATC+GGG - tig0022494:83545-83564 None:intergenic 30.0%
! CATATCCTCATTTTGCATAT+CGG - tig0022494:83546-83565 None:intergenic 30.0%
TCATGATATAAGATGTTTGG+AGG + tig0022494:83615-83634 Msa1400970:three_prime_UTR 30.0%
!! TGGTTCAAGTTTTATCTTCA+TGG + tig0022494:83668-83687 Msa1400970:three_prime_UTR 30.0%
TTGCTTGTACGAAATAATCT+AGG + tig0022494:83947-83966 Msa1400970:intron 30.0%
TTAGCTGGATTTAAAGACAA+CGG + tig0022494:84144-84163 Msa1400970:intron 30.0%
GATGTTGATATAATTCTGGT+AGG + tig0022494:84167-84186 Msa1400970:intron 30.0%
! AGCTTTAACATTTAGGTGAT+TGG + tig0022494:84221-84240 Msa1400970:intron 30.0%
ACTCAGTGTCTCTTATAAAT+AGG - tig0022494:84268-84287 None:intergenic 30.0%
GAGACACTGAGTTTATTTAT+AGG + tig0022494:84276-84295 Msa1400970:intron 30.0%
ATTAATGACTATCGTTGTAC+GGG - tig0022494:84384-84403 None:intergenic 30.0%
CATTAATGACTATCGTTGTA+CGG - tig0022494:84385-84404 None:intergenic 30.0%
! GTTTGATTTAAATTGTCCCA+TGG - tig0022494:84475-84494 None:intergenic 30.0%
TGGGACAATTTAAATCAAAC+TGG + tig0022494:84475-84494 Msa1400970:intron 30.0%
TCGAATAAATAGCATTAGCT+GGG - tig0022494:84589-84608 None:intergenic 30.0%
TTCGAATAAATAGCATTAGC+TGG - tig0022494:84590-84609 None:intergenic 30.0%
! TCCTACTCCTTTTATATTTG+GGG - tig0022494:84629-84648 None:intergenic 30.0%
! GTTCCTACTCCTTTTATATT+TGG - tig0022494:84631-84650 None:intergenic 30.0%
! CAATCTCTTTCTTTTGCATT+TGG + tig0022494:84670-84689 Msa1400970:intron 30.0%
! ATTCAAAAGTTTTGCGAATC+AGG - tig0022494:84704-84723 None:intergenic 30.0%
AATAACTACTTTGATGTACG+AGG + tig0022494:85017-85036 Msa1400970:intron 30.0%
!!! AGTCAATCCCAAGTTTTTTA+CGG + tig0022494:85226-85245 Msa1400970:intron 30.0%
TGAACATGTAATAATCCTGT+CGG - tig0022494:85443-85462 None:intergenic 30.0%
GGATTATTACATGTTCATGT+AGG + tig0022494:85446-85465 Msa1400970:intron 30.0%
!! ACACAAGAGTGTTCAAAATT+GGG - tig0022494:85624-85643 None:intergenic 30.0%
!! TACACAAGAGTGTTCAAAAT+TGG - tig0022494:85625-85644 None:intergenic 30.0%
TCTAATTCCCCTCTTAAAAT+AGG + tig0022494:85692-85711 Msa1400970:intron 30.0%
!! TTGGTTTCCTATTTTAAGAG+GGG - tig0022494:85702-85721 None:intergenic 30.0%
! GGTTCATCATCTTAATCTTT+TGG - tig0022494:85721-85740 None:intergenic 30.0%
AGTGTCAGACACATTATTAT+CGG - tig0022494:86123-86142 None:intergenic 30.0%
AACCTGTGATTATTGTGTAA+AGG - tig0022494:86546-86565 None:intergenic 30.0%
AATAATCACAGGTTCTTTGA+AGG + tig0022494:86552-86571 Msa1400970:intron 30.0%
ATAATCACAGGTTCTTTGAA+GGG + tig0022494:86553-86572 Msa1400970:intron 30.0%
AGAACCTAAAATATAAAGGG+GGG - tig0022494:86585-86604 None:intergenic 30.0%
GAGAACCTAAAATATAAAGG+GGG - tig0022494:86586-86605 None:intergenic 30.0%
GGAGAACCTAAAATATAAAG+GGG - tig0022494:86587-86606 None:intergenic 30.0%
! GATAGTTGTTTAGTTCCGAT+CGG - tig0022494:79878-79897 None:intergenic 35.0%
GAGAAGATTGAACAGTTTAG+AGG + tig0022494:80029-80048 Msa1400970:CDS 35.0%
! TCGCTTGTTGCTATAAAGAA+TGG + tig0022494:80065-80084 Msa1400970:CDS 35.0%
TCTATATAGCACCAACACTT+CGG - tig0022494:80434-80453 None:intergenic 35.0%
!!! GGTTAACTTGTGTAGTTTTG+GGG + tig0022494:80575-80594 Msa1400970:intron 35.0%
TTAGTATCAGTTCCATTGCT+AGG + tig0022494:80598-80617 Msa1400970:intron 35.0%
CCTAAACTTAAACCTAGCAA+TGG - tig0022494:80613-80632 None:intergenic 35.0%
! CCATTGCTAGGTTTAAGTTT+AGG + tig0022494:80610-80629 Msa1400970:intron 35.0%
! TGCTAGGTTTAAGTTTAGGT+TGG + tig0022494:80614-80633 Msa1400970:intron 35.0%
! AAATTTGGGGTTGAGAGATA+GGG + tig0022494:80839-80858 Msa1400970:intron 35.0%
CAAGATTCATTCACAATTGC+AGG + tig0022494:80870-80889 Msa1400970:intron 35.0%
GAGAAAAATCCATCAAGCAA+TGG + tig0022494:80961-80980 Msa1400970:CDS 35.0%
GAAAAATCCATCAAGCAATG+GGG + tig0022494:80963-80982 Msa1400970:CDS 35.0%
GTGTAACATAGAACTTTAGC+CGG - tig0022494:81071-81090 None:intergenic 35.0%
! TGAAATTGTTTGCTGAAGCT+TGG + tig0022494:81269-81288 Msa1400970:intron 35.0%
! TATACCATTTTGCAAGCTAC+GGG + tig0022494:81308-81327 Msa1400970:intron 35.0%
! TTGTGAATTTTGTCCCTTTC+AGG - tig0022494:81412-81431 None:intergenic 35.0%
ACAAAAAGATAGCCATGTTC+AGG + tig0022494:81428-81447 Msa1400970:intron 35.0%
CCATATTCTCAATAAAAGGC+AGG - tig0022494:81621-81640 None:intergenic 35.0%
! CCTGCCTTTTATTGAGAATA+TGG + tig0022494:81618-81637 Msa1400970:CDS 35.0%
GGGATAATCTTCTGTATCAA+TGG - tig0022494:81814-81833 None:intergenic 35.0%
ATACAGAAGATTATCCCACA+TGG + tig0022494:81817-81836 Msa1400970:CDS 35.0%
TACAGAAGATTATCCCACAT+GGG + tig0022494:81818-81837 Msa1400970:CDS 35.0%
ATGACAGATTAAGGCTCATA+TGG - tig0022494:81991-82010 None:intergenic 35.0%
ATGAGCCTTAATCTGTCATA+CGG + tig0022494:81992-82011 Msa1400970:three_prime_UTR 35.0%
! TTTACACGTCTTTGACTTCT+TGG + tig0022494:82246-82265 Msa1400970:three_prime_UTR 35.0%
!! GTTCTCTTTGCTATTCAGAA+GGG + tig0022494:82289-82308 Msa1400970:three_prime_UTR 35.0%
CAAATCAAGCTTGGAATTCT+TGG + tig0022494:82363-82382 Msa1400970:three_prime_UTR 35.0%
GAATTCTTGGCTTATCTTGA+AGG + tig0022494:82376-82395 Msa1400970:three_prime_UTR 35.0%
!! TGGCTTATCTTGAAGGTATT+AGG + tig0022494:82383-82402 Msa1400970:intron 35.0%
GAAAAGTAAGATTAGCGGAA+AGG - tig0022494:82416-82435 None:intergenic 35.0%
ATACCGAGTTCATGAAACAA+TGG + tig0022494:82775-82794 Msa1400970:three_prime_UTR 35.0%
! CAGGATCTAAATTTTGGACA+GGG - tig0022494:82967-82986 None:intergenic 35.0%
GAACTTGTCAGAACAAGAAA+GGG - tig0022494:83077-83096 None:intergenic 35.0%
! CTTCTTTCTAGGTCAGTTTT+AGG + tig0022494:83115-83134 Msa1400970:intron 35.0%
GAACTTACAGATACTCAACT+TGG + tig0022494:83198-83217 Msa1400970:intron 35.0%
AAGAGTCATAATACAAGCAC+CGG + tig0022494:83245-83264 Msa1400970:three_prime_UTR 35.0%
! TTTTTCCAAAGTTCCGTTTG+AGG + tig0022494:83461-83480 Msa1400970:intron 35.0%
ATTACCCGATATGCAAAATG+AGG + tig0022494:83538-83557 Msa1400970:intron 35.0%
TACCTAGATCATAATAGACG+TGG + tig0022494:83575-83594 Msa1400970:intron 35.0%
TTCCACGTCTATTATGATCT+AGG - tig0022494:83580-83599 None:intergenic 35.0%
ATAGACGTGGAATCATTTGT+AGG + tig0022494:83588-83607 Msa1400970:intron 35.0%
TTGGTTGCATTATTCAGATC+CGG + tig0022494:83844-83863 Msa1400970:intron 35.0%
ATTGCAAATATATGCATCCC+CGG - tig0022494:83866-83885 None:intergenic 35.0%
! AATAAGTTGGAAGGAAACCA+GGG - tig0022494:83920-83939 None:intergenic 35.0%
TCGATATCACATACCTTTAG+AGG - tig0022494:84068-84087 None:intergenic 35.0%
ACCACGAAAAGAAGTAATCA+GGG - tig0022494:84118-84137 None:intergenic 35.0%
AACCACGAAAAGAAGTAATC+AGG - tig0022494:84119-84138 None:intergenic 35.0%
! TTACTTCTTTTCGTGGTTAC+TGG + tig0022494:84121-84140 Msa1400970:intron 35.0%
TAGCTGGATTTAAAGACAAC+GGG + tig0022494:84145-84164 Msa1400970:intron 35.0%
ACGGGATGTTGATATAATTC+TGG + tig0022494:84163-84182 Msa1400970:intron 35.0%
CTCTTATAAATAGGACAGGA+GGG - tig0022494:84259-84278 None:intergenic 35.0%
TCTCTTATAAATAGGACAGG+AGG - tig0022494:84260-84279 None:intergenic 35.0%
GTGTCTCTTATAAATAGGAC+AGG - tig0022494:84263-84282 None:intergenic 35.0%
TACTAATATAGGGGGATTGA+AGG - tig0022494:84329-84348 None:intergenic 35.0%
TTAATGACTATCGTTGTACG+GGG - tig0022494:84383-84402 None:intergenic 35.0%
TAAATTGTCCCATGGTTCAA+TGG - tig0022494:84467-84486 None:intergenic 35.0%
!! GTGTTCTAGTTTGTATCTAG+TGG + tig0022494:84537-84556 Msa1400970:intron 35.0%
ACCCCAAATATAAAAGGAGT+AGG + tig0022494:84625-84644 Msa1400970:intron 35.0%
ATAAAAGGAGTAGGAACTAG+AGG + tig0022494:84634-84653 Msa1400970:intron 35.0%
TAAAAGGAGTAGGAACTAGA+GGG + tig0022494:84635-84654 Msa1400970:intron 35.0%
! TCTCTTTCTTTTGCATTTGG+TGG + tig0022494:84673-84692 Msa1400970:intron 35.0%
ACACTCAACCCAAAGAAAAA+TGG + tig0022494:84775-84794 Msa1400970:intron 35.0%
!! AAATTTTGGTGGGAAATCCT+TGG + tig0022494:84851-84870 Msa1400970:intron 35.0%
!! GAAATTTTAATGCCTAGCCA+AGG - tig0022494:84871-84890 None:intergenic 35.0%
TGCTTCTCGTTATCAGAAAA+AGG + tig0022494:85149-85168 Msa1400970:intron 35.0%
! TGGGTTGAAATTGAAATGTG+AGG - tig0022494:85358-85377 None:intergenic 35.0%
!!! TCTTTTTGGGTTGAAATGTG+AGG - tig0022494:85497-85516 None:intergenic 35.0%
!!! GTGCTTAGCTTTTTAGTTAG+AGG + tig0022494:85536-85555 Msa1400970:intron 35.0%
TTGAATCCAATCTGATATGG+TGG + tig0022494:85583-85602 Msa1400970:intron 35.0%
TGAATCCAATCTGATATGGT+GGG + tig0022494:85584-85603 Msa1400970:intron 35.0%
!!! CATAACTCAACTTTTTTGGG+AGG - tig0022494:85742-85761 None:intergenic 35.0%
!!! ACATGCAGATGTTTTTGGAT+GGG + tig0022494:85816-85835 Msa1400970:intron 35.0%
CGGCAGCTAATTCATAATAA+CGG - tig0022494:85913-85932 None:intergenic 35.0%
TTCTTCCTTGATATTCAGGT+AGG + tig0022494:86161-86180 Msa1400970:intron 35.0%
TTGCATCCTATCGTTCATTA+TGG + tig0022494:86361-86380 Msa1400970:three_prime_UTR 35.0%
!! TTTTTAAGAGTTTGCACGTG+TGG + tig0022494:86422-86441 Msa1400970:three_prime_UTR 35.0%
TGATTGATTGCTTTCTTGCT+TGG + tig0022494:86465-86484 Msa1400970:three_prime_UTR 35.0%
! TAATCACAGGTTCTTTGAAG+GGG + tig0022494:86554-86573 Msa1400970:intron 35.0%
GAACCTAAAATATAAAGGGG+GGG - tig0022494:86584-86603 None:intergenic 35.0%
GAGTTCGGAAATGTAGGATT+CGG - tig0022494:79829-79848 None:intergenic 40.0%
!! GAGTACAAAGCTTGTTGATG+TGG + tig0022494:79962-79981 Msa1400970:intron 40.0%
!! AAAGCTTGTTGATGTGGATG+CGG + tig0022494:79968-79987 Msa1400970:intron 40.0%
TCATCTTCAATCCGAAGTGT+TGG + tig0022494:80420-80439 Msa1400970:intron 40.0%
TGCGGTGTATTTGTTTGTGT+TGG + tig0022494:80527-80546 Msa1400970:intron 40.0%
! GAAATTTGGGGTTGAGAGAT+AGG + tig0022494:80838-80857 Msa1400970:intron 40.0%
! GCAGGTTGAGAAACTGATAA+AGG + tig0022494:80888-80907 Msa1400970:intron 40.0%
GTTCTATGTTACACATGCGA+AGG + tig0022494:81077-81096 Msa1400970:CDS 40.0%
AATTACGGACATTCAATGCC+TGG - tig0022494:81513-81532 None:intergenic 40.0%
ATAAAAGGCAGGTTCTGTAC+TGG - tig0022494:81610-81629 None:intergenic 40.0%
CTACTAGTAGATGCAAGCTT+GGG + tig0022494:81664-81683 Msa1400970:CDS 40.0%
TTGGGACATTGCTTTGTAGA+TGG + tig0022494:81682-81701 Msa1400970:CDS 40.0%
! TTGTAGATGGTCTAGAACAC+CGG + tig0022494:81695-81714 Msa1400970:CDS 40.0%
TGTAAATTGCAGTTGCATCC+CGG - tig0022494:81717-81736 None:intergenic 40.0%
!!! AACTTTTCGAGTGACTGTTG+TGG + tig0022494:81786-81805 Msa1400970:CDS 40.0%
CAATGCCGTATGACAGATTA+AGG - tig0022494:82000-82019 None:intergenic 40.0%
CTTAATCTGTCATACGGCAT+TGG + tig0022494:81998-82017 Msa1400970:three_prime_UTR 40.0%
TTAAAGACCAAGAAGGACTG+AGG - tig0022494:82058-82077 None:intergenic 40.0%
! TACTACATGTACTGTTGGCT+AGG + tig0022494:82118-82137 Msa1400970:three_prime_UTR 40.0%
! ACTGTTGGCTAGGTCATTTA+TGG + tig0022494:82128-82147 Msa1400970:three_prime_UTR 40.0%
GTCATTTATGGTCATGCATG+TGG + tig0022494:82140-82159 Msa1400970:three_prime_UTR 40.0%
!! GTACTTGGTGCAGAAAATTC+AGG + tig0022494:82223-82242 Msa1400970:three_prime_UTR 40.0%
! AACCTCTCTAAGGATTGAGT+TGG - tig0022494:82272-82291 None:intergenic 40.0%
TAGCAAAGAGAACCTCTCTA+AGG - tig0022494:82282-82301 None:intergenic 40.0%
!! GGTTCTCTTTGCTATTCAGA+AGG + tig0022494:82288-82307 Msa1400970:three_prime_UTR 40.0%
! TTGGAGCGTATTTTTCTGTG+AGG + tig0022494:82802-82821 Msa1400970:three_prime_UTR 40.0%
GGTGATTCTCTTCTTTACGA+TGG + tig0022494:82823-82842 Msa1400970:intron 40.0%
CTCATATCTTCAATTGCCTC+AGG + tig0022494:82888-82907 Msa1400970:intron 40.0%
TCAGGTTTCAGGAAATAGCA+GGG + tig0022494:82906-82925 Msa1400970:intron 40.0%
! CCAGGATCTAAATTTTGGAC+AGG - tig0022494:82968-82987 None:intergenic 40.0%
CCTGTCCAAAATTTAGATCC+TGG + tig0022494:82965-82984 Msa1400970:three_prime_UTR 40.0%
! CTTCGCCAGGATCTAAATTT+TGG - tig0022494:82973-82992 None:intergenic 40.0%
!! TCTTGATAATTTGCTTCGCC+AGG - tig0022494:82986-83005 None:intergenic 40.0%
TGTATCTCTGTTGGAGAGTT+TGG + tig0022494:83024-83043 Msa1400970:three_prime_UTR 40.0%
GTATCTCTGTTGGAGAGTTT+GGG + tig0022494:83025-83044 Msa1400970:three_prime_UTR 40.0%
GGAACTTGTCAGAACAAGAA+AGG - tig0022494:83078-83097 None:intergenic 40.0%
TAGAAAGAAGCTGCAAGGAT+AGG - tig0022494:83105-83124 None:intergenic 40.0%
TATCCTTGCAGCTTCTTTCT+AGG + tig0022494:83104-83123 Msa1400970:three_prime_UTR 40.0%
!!! CTTTCTAGGTCAGTTTTAGG+TGG + tig0022494:83118-83137 Msa1400970:intron 40.0%
! GTAAAGGCATGATGCATACA+AGG - tig0022494:83316-83335 None:intergenic 40.0%
AGTCTTCAGCATACAGATGT+GGG - tig0022494:83369-83388 None:intergenic 40.0%
AAGTCTTCAGCATACAGATG+TGG - tig0022494:83370-83389 None:intergenic 40.0%
CAAATCCTCAAACGGAACTT+TGG - tig0022494:83469-83488 None:intergenic 40.0%
CAAAGTTCCGTTTGAGGATT+TGG + tig0022494:83467-83486 Msa1400970:intron 40.0%
TGGTGATTACTTACAACACG+TGG + tig0022494:83648-83667 Msa1400970:three_prime_UTR 40.0%
ACCTTTAGTCATCAAAGCAG+TGG + tig0022494:83759-83778 Msa1400970:three_prime_UTR 40.0%
! ACCACTGCTTTGATGACTAA+AGG - tig0022494:83763-83782 None:intergenic 40.0%
TTTAGTCATCAAAGCAGTGG+TGG + tig0022494:83762-83781 Msa1400970:three_prime_UTR 40.0%
TGGTTGCATTATTCAGATCC+GGG + tig0022494:83845-83864 Msa1400970:intron 40.0%
! ATAAGTTGGAAGGAAACCAG+GGG - tig0022494:83919-83938 None:intergenic 40.0%
! GAATAAGTTGGAAGGAAACC+AGG - tig0022494:83921-83940 None:intergenic 40.0%
TAGGACTTGAGACAGATGAA+GGG + tig0022494:83966-83985 Msa1400970:intron 40.0%
! ACCCTGATTACTTCTTTTCG+TGG + tig0022494:84114-84133 Msa1400970:intron 40.0%
!!! TTTTTTGTGCCACATGCATG+GGG - tig0022494:84436-84455 None:intergenic 40.0%
!!! CTTTTTTGTGCCACATGCAT+GGG - tig0022494:84437-84456 None:intergenic 40.0%
AAAAGGAGTAGGAACTAGAG+GGG + tig0022494:84636-84655 Msa1400970:intron 40.0%
!!! TTGTTAGGTGGGCTACTTTT+AGG + tig0022494:85262-85281 Msa1400970:intron 40.0%
TTTAGGTATCACTGCTTCTG+TGG + tig0022494:85324-85343 Msa1400970:intron 40.0%
TTAGGTATCACTGCTTCTGT+GGG + tig0022494:85325-85344 Msa1400970:intron 40.0%
!!! TAGCTTTTTAGTTAGAGGCC+AGG + tig0022494:85541-85560 Msa1400970:intron 40.0%
!!! AGCTTTTTAGTTAGAGGCCA+GGG + tig0022494:85542-85561 Msa1400970:intron 40.0%
ATCTGCAGCGCTATGAAAAA+TGG + tig0022494:85647-85666 Msa1400970:intron 40.0%
! TGGTGACATGCAGATGTTTT+TGG + tig0022494:85811-85830 Msa1400970:intron 40.0%
!!! GACATGCAGATGTTTTTGGA+TGG + tig0022494:85815-85834 Msa1400970:intron 40.0%
!!! CATGCAGATGTTTTTGGATG+GGG + tig0022494:85817-85836 Msa1400970:intron 40.0%
TGGGGAAAGAATCTCGTATT+TGG + tig0022494:85835-85854 Msa1400970:three_prime_UTR 40.0%
TAATGTCAGTTGCTGCACAA+AGG - tig0022494:85886-85905 None:intergenic 40.0%
TCTTACCGTAGTAACAAGGT+CGG - tig0022494:85933-85952 None:intergenic 40.0%
GGATTCTTACCGTAGTAACA+AGG - tig0022494:85937-85956 None:intergenic 40.0%
TTGGTTGTGAGTAGTCAAGA+AGG + tig0022494:86030-86049 Msa1400970:intron 40.0%
GCAGTTCTTCCTTGATATTC+AGG + tig0022494:86157-86176 Msa1400970:three_prime_UTR 40.0%
TCATGCCTACCTGAATATCA+AGG - tig0022494:86169-86188 None:intergenic 40.0%
ACACTGCCATAATGAACGAT+AGG - tig0022494:86370-86389 None:intergenic 40.0%
GGCCTTTACACAATAATCAC+AGG + tig0022494:86541-86560 Msa1400970:intron 40.0%
! TCTCCCCCCCTTTATATTTT+AGG + tig0022494:86578-86597 Msa1400970:intron 40.0%
TTAGGTTCTCCTTCATCACT+AGG + tig0022494:86596-86615 Msa1400970:intron 40.0%
TTCTCCTTCATCACTAGGAT+AGG + tig0022494:86601-86620 Msa1400970:intron 40.0%
AGAACCTATCCTAGTGATGA+AGG - tig0022494:86608-86627 None:intergenic 40.0%
TCATCACTAGGATAGGTTCT+CGG + tig0022494:86608-86627 Msa1400970:intron 40.0%
AGGATTCGGAATCGAAGTCA+GGG - tig0022494:79815-79834 None:intergenic 45.0%
TAGGATTCGGAATCGAAGTC+AGG - tig0022494:79816-79835 None:intergenic 45.0%
TGTCAAAGGGAACGAAGGTT+CGG - tig0022494:79851-79870 None:intergenic 45.0%
TAACGAAATCAGCGTAGTCG+CGG - tig0022494:79938-79957 None:intergenic 45.0%
AAGAAGCTCCAAAGTCTCTC+TGG - tig0022494:80120-80139 None:intergenic 45.0%
CTTCGGATTGAAGATGAGTC+TGG - tig0022494:80417-80436 None:intergenic 45.0%
TCTCCATTTGACCAGTCAGA+GGG - tig0022494:80928-80947 None:intergenic 45.0%
ATCTCCATTTGACCAGTCAG+AGG - tig0022494:80929-80948 None:intergenic 45.0%
ACAGAAACCCCATTGCTTGA+TGG - tig0022494:80973-80992 None:intergenic 45.0%
! TCTGTGCAGCAAGTTGAGAA+TGG + tig0022494:80988-81007 Msa1400970:CDS 45.0%
! CTGTGCAGCAAGTTGAGAAT+GGG + tig0022494:80989-81008 Msa1400970:CDS 45.0%
AGAGACTCAAAGTATGCTGC+TGG + tig0022494:81023-81042 Msa1400970:CDS 45.0%
GAATTGCCAGTGAGATGAAC+CGG + tig0022494:81049-81068 Msa1400970:CDS 45.0%
CCAAGCTTGCATCTACTAGT+AGG - tig0022494:81666-81685 None:intergenic 45.0%
CCTACTAGTAGATGCAAGCT+TGG + tig0022494:81663-81682 Msa1400970:CDS 45.0%
! TGTAGATGGTCTAGAACACC+GGG + tig0022494:81696-81715 Msa1400970:CDS 45.0%
GATTATCCCACATGGGTCAT+CGG + tig0022494:81825-81844 Msa1400970:CDS 45.0%
GGCTCATATGGATCCTAAAG+TGG - tig0022494:81979-81998 None:intergenic 45.0%
!! GTCATACGGCATTGGTTTCT+TGG + tig0022494:82006-82025 Msa1400970:three_prime_UTR 45.0%
! AAGCCAGGTGCATTTTCTGT+TGG + tig0022494:82313-82332 Msa1400970:three_prime_UTR 45.0%
CTTCCAACAGAAAATGCACC+TGG - tig0022494:82319-82338 None:intergenic 45.0%
TTAGCAACGGCAGATCTAGA+CGG - tig0022494:82735-82754 None:intergenic 45.0%
CTTCAATTGCCTCAGGTTTC+AGG + tig0022494:82895-82914 Msa1400970:intron 45.0%
!! CTGCTATTTCCTGAAACCTG+AGG - tig0022494:82907-82926 None:intergenic 45.0%
CTCAGGTTTCAGGAAATAGC+AGG + tig0022494:82905-82924 Msa1400970:intron 45.0%
! ATTTTGGACAGGGACAACAC+TGG - tig0022494:82957-82976 None:intergenic 45.0%
TGACCTAGAAAGAAGCTGCA+AGG - tig0022494:83110-83129 None:intergenic 45.0%
TACTCAACTTGGCTGTCATC+TGG + tig0022494:83209-83228 Msa1400970:three_prime_UTR 45.0%
!! ATAATACAAGCACCGGCACT+GGG + tig0022494:83252-83271 Msa1400970:three_prime_UTR 45.0%
!! AGGCAGAGCATTTTACAGAG+TGG + tig0022494:83715-83734 Msa1400970:three_prime_UTR 45.0%
ACTGGTGGAAAAATCAGTCG+AGG + tig0022494:83789-83808 Msa1400970:three_prime_UTR 45.0%
GTGGAAAAATCAGTCGAGGT+AGG + tig0022494:83793-83812 Msa1400970:intron 45.0%
GGTTGCATTATTCAGATCCG+GGG + tig0022494:83846-83865 Msa1400970:intron 45.0%
! TAAGTTGGAAGGAAACCAGG+GGG - tig0022494:83918-83937 None:intergenic 45.0%
CTAGGACTTGAGACAGATGA+AGG + tig0022494:83965-83984 Msa1400970:intron 45.0%
AGGACTTGAGACAGATGAAG+GGG + tig0022494:83967-83986 Msa1400970:intron 45.0%
AGGGGATAACAGCAACTTAC+AGG + tig0022494:83985-84004 Msa1400970:three_prime_UTR 45.0%
CCTAACAGGTAGAGGCTTAT+TGG - tig0022494:84015-84034 None:intergenic 45.0%
CCAATAAGCCTCTACCTGTT+AGG + tig0022494:84012-84031 Msa1400970:three_prime_UTR 45.0%
ACATATGGTGAGTGCCTAAC+AGG - tig0022494:84029-84048 None:intergenic 45.0%
TAGGCACTCACCATATGTTG+CGG + tig0022494:84031-84050 Msa1400970:three_prime_UTR 45.0%
CGTAATACTCCCGCAACATA+TGG - tig0022494:84044-84063 None:intergenic 45.0%
!! GGGAGTATTACGTCCTCTAA+AGG + tig0022494:84052-84071 Msa1400970:three_prime_UTR 45.0%
! TTTCGTGGTTACTGGTTAGC+TGG + tig0022494:84129-84148 Msa1400970:intron 45.0%
!!! CCTTTTTTGTGCCACATGCA+TGG - tig0022494:84438-84457 None:intergenic 45.0%
CCATGCATGTGGCACAAAAA+AGG + tig0022494:84435-84454 Msa1400970:intron 45.0%
AGGTAGTCACCATTGAACCA+TGG + tig0022494:84455-84474 Msa1400970:intron 45.0%
GGTAGTCACCATTGAACCAT+GGG + tig0022494:84456-84475 Msa1400970:intron 45.0%
AACACTGCTGTCACAAACAC+TGG - tig0022494:84522-84541 None:intergenic 45.0%
TGATCTATTGGAAGTCCGAC+AGG + tig0022494:85425-85444 Msa1400970:intron 45.0%
AATGTGAGGCCAAAGGTTCA+CGG - tig0022494:85483-85502 None:intergenic 45.0%
! ATCCAATCTGATATGGTGGG+TGG + tig0022494:85587-85606 Msa1400970:intron 45.0%
CACATGCAACATGCAAGACA+TGG + tig0022494:86195-86214 Msa1400970:intron 45.0%
!! AGAAAGCATTCACGGTTTGC+AGG - tig0022494:86258-86277 None:intergenic 45.0%
GGTGACGATATGTAAGAGGA+AGG - tig0022494:86293-86312 None:intergenic 45.0%
TCCTCTTACATATCGTCACC+AGG + tig0022494:86293-86312 Msa1400970:intron 45.0%
! TCCTGGTGACGATATGTAAG+AGG - tig0022494:86297-86316 None:intergenic 45.0%
TCGTTCATTATGGCAGTGTG+TGG + tig0022494:86371-86390 Msa1400970:three_prime_UTR 45.0%
ATGTTGTTCTGCCTATCTGC+TGG - tig0022494:86399-86418 None:intergenic 45.0%
AGGTTCTCGGTTGTTATCTC+TGG + tig0022494:86621-86640 Msa1400970:intron 45.0%
!! ATTAAAAAAAAAACAAAAAT+GGG - tig0022494:81120-81139 None:intergenic 5.0%
!! TAATTATAATTAAATAGAAT+TGG + tig0022494:82521-82540 Msa1400970:intron 5.0%
!! TAAAATTTATTACTAATATA+GGG - tig0022494:84339-84358 None:intergenic 5.0%
!! ATAAAATTTATTACTAATAT+AGG - tig0022494:84340-84359 None:intergenic 5.0%
!! TTGTTTAATTATAAAAATTT+GGG - tig0022494:85377-85396 None:intergenic 5.0%
ATCGGAGAAGAGGTTTGTGG+TGG - tig0022494:79745-79764 None:intergenic 50.0%
TGGATCGGAGAAGAGGTTTG+TGG - tig0022494:79748-79767 None:intergenic 50.0%
AGGATGAGAGTCGAGTGGAT+CGG - tig0022494:79763-79782 None:intergenic 50.0%
GAGGTAGGTTTGAACCAGAG+AGG - tig0022494:79783-79802 None:intergenic 50.0%
GGATTCGGAATCGAAGTCAG+GGG - tig0022494:79814-79833 None:intergenic 50.0%
GGTTCGGAGTTCGGAAATGT+AGG - tig0022494:79835-79854 None:intergenic 50.0%
GAGTGTGTCAAAGGGAACGA+AGG - tig0022494:79856-79875 None:intergenic 50.0%
TCCCTTTGACACACTCCGAT+CGG + tig0022494:79860-79879 Msa1400970:CDS 50.0%
TCCGATCGGAGTGTGTCAAA+GGG - tig0022494:79864-79883 None:intergenic 50.0%
TTCCGATCGGAGTGTGTCAA+AGG - tig0022494:79865-79884 None:intergenic 50.0%
TTCTCCCTCAACTCCACAAG+TGG - tig0022494:80014-80033 None:intergenic 50.0%
TGCTTCTGCCAGAGAGACTT+TGG + tig0022494:80109-80128 Msa1400970:CDS 50.0%
GGGGTTGAGAGATAGGGAAT+TGG + tig0022494:80845-80864 Msa1400970:intron 50.0%
! GTACCCTCTGACTGGTCAAA+TGG + tig0022494:80922-80941 Msa1400970:CDS 50.0%
! CTTTAGCCGGTTCATCTCAC+TGG - tig0022494:81058-81077 None:intergenic 50.0%
! GTTTGCTGAAGCTTGGTGAG+AGG + tig0022494:81276-81295 Msa1400970:intron 50.0%
! ACCATTTTGCAAGCTACGGG+TGG + tig0022494:81311-81330 Msa1400970:intron 50.0%
! CCATTTTGCAAGCTACGGGT+GGG + tig0022494:81312-81331 Msa1400970:intron 50.0%
! AGCTACGGGTGGGTGTTTTT+CGG + tig0022494:81322-81341 Msa1400970:intron 50.0%
CTGTGGCTTCTGGATCATCT+GGG + tig0022494:81848-81867 Msa1400970:CDS 50.0%
TGTGGCTTCTGGATCATCTG+GGG + tig0022494:81849-81868 Msa1400970:CDS 50.0%
CTTCTGGATCATCTGGGGAT+GGG + tig0022494:81854-81873 Msa1400970:CDS 50.0%
AGGCATTCCTCAGTCCTTCT+TGG + tig0022494:82048-82067 Msa1400970:three_prime_UTR 50.0%
GGCCAACTCAATCCTTAGAG+AGG + tig0022494:82267-82286 Msa1400970:three_prime_UTR 50.0%
GCTATTCAGAAGGGAAAGCC+AGG + tig0022494:82298-82317 Msa1400970:three_prime_UTR 50.0%
! TGGAGAGTTTGGGATTGTGC+TGG + tig0022494:83035-83054 Msa1400970:three_prime_UTR 50.0%
TGTCATCTGGACTGACTGCA+CGG + tig0022494:83222-83241 Msa1400970:three_prime_UTR 50.0%
!! CATAATACAAGCACCGGCAC+TGG + tig0022494:83251-83270 Msa1400970:three_prime_UTR 50.0%
TTTCTACCTTTGCTTCCCCC+TGG + tig0022494:83900-83919 Msa1400970:intron 50.0%
AGGCACTCACCATATGTTGC+GGG + tig0022494:84032-84051 Msa1400970:three_prime_UTR 50.0%
GGGGATGGGTGTGGAAATAA+GGG - tig0022494:84417-84436 None:intergenic 50.0%
TGGGGATGGGTGTGGAAATA+AGG - tig0022494:84418-84437 None:intergenic 50.0%
TTGGTGGGAAATCCTTGGCT+AGG + tig0022494:84856-84875 Msa1400970:intron 50.0%
TCACTGCTTCTGTGGGCATT+TGG + tig0022494:85332-85351 Msa1400970:intron 50.0%
TCACTGCTTCCGTGAACCTT+TGG + tig0022494:85471-85490 Msa1400970:intron 50.0%
GGGTTGAAATGTGAGGCCAA+AGG - tig0022494:85490-85509 None:intergenic 50.0%
TTGCATGAGCGTAGTTTCCC+TGG - tig0022494:85562-85581 None:intergenic 50.0%
TGCCACCCACCATATCAGAT+TGG - tig0022494:85592-85611 None:intergenic 50.0%
AGCTGCCGACCTTGTTACTA+CGG + tig0022494:85925-85944 Msa1400970:three_prime_UTR 50.0%
AGAGATTACGGGCATACTCC+TGG - tig0022494:86314-86333 None:intergenic 50.0%
GATCTGTGATGCGCTGGAAC+TGG - tig0022494:79723-79742 None:intergenic 55.0%
AGTCGAGTGGATCGGAGAAG+AGG - tig0022494:79755-79774 None:intergenic 55.0%
CAGAGAGGATGAGAGTCGAG+TGG - tig0022494:79768-79787 None:intergenic 55.0%
CACTCGACTCTCATCCTCTC+TGG + tig0022494:79766-79785 Msa1400970:CDS 55.0%
ATCGAAGTCAGGGGAGAGGA+AGG - tig0022494:79805-79824 None:intergenic 55.0%
GGGAACGAAGGTTCGGAGTT+CGG - tig0022494:79844-79863 None:intergenic 55.0%
! GCTTGTTGATGTGGATGCGG+CGG + tig0022494:79971-79990 Msa1400970:intron 55.0%
TGCGCCACTTGTGGAGTTGA+GGG + tig0022494:80007-80026 Msa1400970:CDS 55.0%
TGCCTAGTGTACCCTCTGAC+TGG + tig0022494:80914-80933 Msa1400970:CDS 55.0%
! GACCAGTCAGAGGGTACACT+AGG - tig0022494:80919-80938 None:intergenic 55.0%
! TGAAGCTTGGTGAGAGGCGA+AGG + tig0022494:81282-81301 Msa1400970:intron 55.0%
! GAAGCTTGGTGAGAGGCGAA+GGG + tig0022494:81283-81302 Msa1400970:intron 55.0%
! CCCACCCGTAGCTTGCAAAA+TGG - tig0022494:81315-81334 None:intergenic 55.0%
! GCTACGGGTGGGTGTTTTTC+GGG + tig0022494:81323-81342 Msa1400970:intron 55.0%
GCTGTGGCTTCTGGATCATC+TGG + tig0022494:81847-81866 Msa1400970:CDS 55.0%
GCTTCTGGATCATCTGGGGA+TGG + tig0022494:81853-81872 Msa1400970:CDS 55.0%
AGGAATGCCTCAGCAAGGAC+TGG - tig0022494:82038-82057 None:intergenic 55.0%
GACTGAGGAATGCCTCAGCA+AGG - tig0022494:82043-82062 None:intergenic 55.0%
GAAGCTGCAAGGATAGGCGA+AGG - tig0022494:83099-83118 None:intergenic 55.0%
! TGTTTGGAGGCGCATGTTCG+TGG + tig0022494:83628-83647 Msa1400970:three_prime_UTR 55.0%
! CAAAGCAGTGGTGGAGTCAC+TGG + tig0022494:83771-83790 Msa1400970:three_prime_UTR 55.0%
AGGAAACCAGGGGGAAGCAA+AGG - tig0022494:83909-83928 None:intergenic 55.0%
GGTGAGTGCCTAACAGGTAG+AGG - tig0022494:84023-84042 None:intergenic 55.0%
TGTGCCACATGCATGGGGAT+GGG - tig0022494:84431-84450 None:intergenic 55.0%
TTGTGCCACATGCATGGGGA+TGG - tig0022494:84432-84451 None:intergenic 55.0%
AGAGTGCACAGAGACGAGCA+GGG + tig0022494:86081-86100 Msa1400970:three_prime_UTR 55.0%
AGACGAGCAGGGACAAGTTC+TGG + tig0022494:86092-86111 Msa1400970:three_prime_UTR 55.0%
CCCTAGCGCAGAGAGATTAC+GGG - tig0022494:86325-86344 None:intergenic 55.0%
CCCGTAATCTCTCTGCGCTA+GGG + tig0022494:86322-86341 Msa1400970:three_prime_UTR 55.0%
CCCCTAGCGCAGAGAGATTA+CGG - tig0022494:86326-86345 None:intergenic 55.0%
CCGTAATCTCTCTGCGCTAG+GGG + tig0022494:86323-86342 Msa1400970:three_prime_UTR 55.0%
AGTGTGTGGCTCCAGCAGAT+AGG + tig0022494:86385-86404 Msa1400970:three_prime_UTR 55.0%
TTGCACGTGTGGAGTCAACG+TGG + tig0022494:86433-86452 Msa1400970:three_prime_UTR 55.0%
!! GTGGTGGATCTGTGATGCGC+TGG - tig0022494:79729-79748 None:intergenic 60.0%
TCAGGGGAGAGGAAGGAGGT+AGG - tig0022494:79798-79817 None:intergenic 60.0%
GAAGTCAGGGGAGAGGAAGG+AGG - tig0022494:79802-79821 None:intergenic 60.0%
CGGAATCGAAGTCAGGGGAG+AGG - tig0022494:79809-79828 None:intergenic 60.0%
TGTTGATGTGGATGCGGCGG+TGG + tig0022494:79974-79993 Msa1400970:CDS 60.0%
GTGCGCCACTTGTGGAGTTG+AGG + tig0022494:80006-80025 Msa1400970:CDS 60.0%
CCACAGCCGATGACCCATGT+GGG - tig0022494:81834-81853 None:intergenic 60.0%
GACCATGCCAGTCCTTGCTG+AGG + tig0022494:82028-82047 Msa1400970:three_prime_UTR 60.0%
! TGCCTCAGCAAGGACTGGCA+TGG - tig0022494:82033-82052 None:intergenic 60.0%
! AGCAGTGGTGGAGTCACTGG+TGG + tig0022494:83774-83793 Msa1400970:three_prime_UTR 60.0%
CACATGCATGGGGATGGGTG+TGG - tig0022494:84426-84445 None:intergenic 60.0%
CACACCCATCCCCATGCATG+TGG + tig0022494:84424-84443 Msa1400970:intron 60.0%
CAGAGTGCACAGAGACGAGC+AGG + tig0022494:86080-86099 Msa1400970:three_prime_UTR 60.0%
GCCCGTAATCTCTCTGCGCT+AGG + tig0022494:86321-86340 Msa1400970:three_prime_UTR 60.0%
ATGTGGATGCGGCGGTGGTG+CGG + tig0022494:79979-79998 Msa1400970:CDS 65.0%
! CCCACATGGGTCATCGGCTG+TGG + tig0022494:81831-81850 Msa1400970:CDS 65.0%
GCCACAGCCGATGACCCATG+TGG - tig0022494:81835-81854 None:intergenic 65.0%
! GGGTCATCGGCTGTGGCTTC+TGG + tig0022494:81838-81857 Msa1400970:CDS 65.0%
GCGGATGCGTGCGCCACTTG+TGG + tig0022494:79998-80017 Msa1400970:CDS 70.0%
!! ACAAGCACCGGCACTGGGCG+CGG + tig0022494:83257-83276 Msa1400970:three_prime_UTR 70.0%
! CACCGGCACTGGGCGCGGAT+GGG + tig0022494:83262-83281 Msa1400970:three_prime_UTR 75.0%
AGCCCATCCGCGCCCAGTGC+CGG - tig0022494:83267-83286 None:intergenic 75.0%
!! GCACCGGCACTGGGCGCGGA+TGG + tig0022494:83261-83280 Msa1400970:three_prime_UTR 80.0%
Chromosome Type Strat End Strand Name
tig0022494 gene 79711 86765 79711 ID=Msa1400970;Name=Msa1400970
tig0022494 mRNA 79711 86765 79711 ID=Msa1400970-mRNA-1;Parent=Msa1400970;Name=Msa1400970-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.91|0.84|1|0.91|0.76|13|1734|337
tig0022494 exon 79711 79953 79711 ID=Msa1400970-mRNA-1:exon:18011;Parent=Msa1400970-mRNA-1
tig0022494 exon 79972 80166 79972 ID=Msa1400970-mRNA-1:exon:18012;Parent=Msa1400970-mRNA-1
tig0022494 exon 80892 81098 80892 ID=Msa1400970-mRNA-1:exon:18013;Parent=Msa1400970-mRNA-1
tig0022494 exon 81616 82397 81616 ID=Msa1400970-mRNA-1:exon:18014;Parent=Msa1400970-mRNA-1
tig0022494 exon 82724 82823 82724 ID=Msa1400970-mRNA-1:exon:18015;Parent=Msa1400970-mRNA-1
tig0022494 exon 82910 83125 82910 ID=Msa1400970-mRNA-1:exon:18016;Parent=Msa1400970-mRNA-1
tig0022494 exon 83208 83316 83208 ID=Msa1400970-mRNA-1:exon:18017;Parent=Msa1400970-mRNA-1
tig0022494 exon 83610 83810 83610 ID=Msa1400970-mRNA-1:exon:18018;Parent=Msa1400970-mRNA-1
tig0022494 exon 83969 84073 83969 ID=Msa1400970-mRNA-1:exon:18019;Parent=Msa1400970-mRNA-1
tig0022494 exon 85824 85946 85824 ID=Msa1400970-mRNA-1:exon:18020;Parent=Msa1400970-mRNA-1
tig0022494 exon 86044 86178 86044 ID=Msa1400970-mRNA-1:exon:18021;Parent=Msa1400970-mRNA-1
tig0022494 exon 86315 86552 86315 ID=Msa1400970-mRNA-1:exon:18022;Parent=Msa1400970-mRNA-1
tig0022494 exon 86672 86765 86672 ID=Msa1400970-mRNA-1:exon:18023;Parent=Msa1400970-mRNA-1
tig0022494 CDS 79711 79953 79711 ID=Msa1400970-mRNA-1:cds;Parent=Msa1400970-mRNA-1
tig0022494 CDS 79972 80166 79972 ID=Msa1400970-mRNA-1:cds;Parent=Msa1400970-mRNA-1
tig0022494 CDS 80892 81098 80892 ID=Msa1400970-mRNA-1:cds;Parent=Msa1400970-mRNA-1
tig0022494 CDS 81616 81984 81616 ID=Msa1400970-mRNA-1:cds;Parent=Msa1400970-mRNA-1
tig0022494 three_prime_UTR 81985 82397 81985 ID=Msa1400970-mRNA-1:three_prime_utr;Parent=Msa1400970-mRNA-1
tig0022494 three_prime_UTR 82724 82823 82724 ID=Msa1400970-mRNA-1:three_prime_utr;Parent=Msa1400970-mRNA-1
tig0022494 three_prime_UTR 82910 83125 82910 ID=Msa1400970-mRNA-1:three_prime_utr;Parent=Msa1400970-mRNA-1
tig0022494 three_prime_UTR 83208 83316 83208 ID=Msa1400970-mRNA-1:three_prime_utr;Parent=Msa1400970-mRNA-1
tig0022494 three_prime_UTR 83610 83810 83610 ID=Msa1400970-mRNA-1:three_prime_utr;Parent=Msa1400970-mRNA-1
tig0022494 three_prime_UTR 83969 84073 83969 ID=Msa1400970-mRNA-1:three_prime_utr;Parent=Msa1400970-mRNA-1
tig0022494 three_prime_UTR 85824 85946 85824 ID=Msa1400970-mRNA-1:three_prime_utr;Parent=Msa1400970-mRNA-1
tig0022494 three_prime_UTR 86044 86178 86044 ID=Msa1400970-mRNA-1:three_prime_utr;Parent=Msa1400970-mRNA-1
tig0022494 three_prime_UTR 86315 86552 86315 ID=Msa1400970-mRNA-1:three_prime_utr;Parent=Msa1400970-mRNA-1
tig0022494 three_prime_UTR 86672 86765 86672 ID=Msa1400970-mRNA-1:three_prime_utr;Parent=Msa1400970-mRNA-1
Gene Sequence

>Msa1400970

ATGGCGGATCCAGTTCCAGCGCATCACAGATCCACCACAAACCTCTTCTCCGATCCACTCGACTCTCATCCTCTCTGGTTCAAACCTACCTCCTTCCTCTCCCCTGACTTCGATTCCGAATCCTACATTTCCGAACTCCGAACCTTCGTTCCCTTTGACACACTCCGATCGGAACTAAACAACTATCTCTCATCGTTAAATCACGAGCTCATTGATCTAATCAACCGCGACTACGCTGATTTCCTTGTTGATGTGGATGCGGCGGTGGTGCGGATGCGTGCGCCACTTGTGGAGTTGAGGGAGAAGATTGAACAGTTTAGAGGTTCTGTTGATGTTTCGCTTGTTGCTATAAAGAATGGTTTGAAGCAACGATCTGAAGCTGCTTCTGCCAGAGAGACTTTGGAGCTTCTTCTTGATACGTTTCATGTTGTTTCTAAGGTTGAGAAACTGATAAAGGAGCTGCCTAGTGTACCCTCTGACTGGTCAAATGGAGATGTGAATTTGTCGGAGAAAAATCCATCAAGCAATGGGGTTTCTGTGCAGCAAGTTGAGAATGGGACAAGTGTCAGAGAGACTCAAAGTATGCTGCTGGAAAGAATTGCCAGTGAGATGAACCGGCTAAAGTTCTATGTTACACATGCGAAGAACCTGCCTTTTATTGAGAATATGGAGAAGAGGATTCAAAATGCAAGCCTACTAGTAGATGCAAGCTTGGGACATTGCTTTGTAGATGGTCTAGAACACCGGGATGCAACTGCAATTTACAATTGCTTACGTGCATATGCTGCCATTGATAACACCAAAAATGCAGAAGAAACTTTTCGAGTGACTGTTGTGGCTCCATTGATACAGAAGATTATCCCACATGGGTCATCGGCTGTGGCTTCTGGATCATCTGGGGATGGGCTTGAAAATGATTATCAATTAATTAAGGAGTGCGTTTATAAAGACTGTAAATTTTTATTGGATATTTCTTCAGCTGGTACCTCATCTAACTTTTTCTTACCACTTTAG
Protein sequence

>Msa1400970

MADPVPAHHRSTTNLFSDPLDSHPLWFKPTSFLSPDFDSESYISELRTFVPFDTLRSELNNYLSSLNHELIDLINRDYADFLVDVDAAVVRMRAPLVELREKIEQFRGSVDVSLVAIKNGLKQRSEAASARETLELLLDTFHVVSKVEKLIKELPSVPSDWSNGDVNLSEKNPSSNGVSVQQVENGTSVRETQSMLLERIASEMNRLKFYVTHAKNLPFIENMEKRIQNASLLVDASLGHCFVDGLEHRDATAIYNCLRAYAAIDNTKNAEETFRVTVVAPLIQKIIPHGSSAVASGSSGDGLENDYQLIKECVYKDCKFLLDISSAGTSSNFFLPL*