AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1442980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1442980 MtrunA17_Chr4g0057621 97.321 336 3 1 1 330 1 336 0.0 668
Msa1442980 MtrunA17_Chr3g0136251 87.786 131 16 0 201 331 24 154 1.58e-79 241
Msa1442980 MtrunA17_Chr3g0136261 75.309 81 15 1 1 81 1 76 4.31e-36 126
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1442980 AT4G24840.1 70.679 324 87 2 13 330 19 340 3.58e-161 469

Find 198 sgRNAs with CRISPR-Local

Find 506 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCGCCAGGATCTAAATTT+TGG 0.128676 tig0030251:-30913 None:intergenic
CTTCAATTGCCTCAGGTTTC+AGG 0.144008 tig0030251:+30838 Msa1442980:intron
GGGTCATCGGCTGTGGCTTC+TGG 0.189894 tig0030251:+29761 Msa1442980:CDS
TATCCTTGCAGCTTCTTTCT+AGG 0.197736 tig0030251:+31047 Msa1442980:three_prime_UTR
TGTATCTCTGTTGGAGAGTT+TGG 0.222147 tig0030251:+30967 Msa1442980:three_prime_UTR
GTCATACGGCATTGGTTTCT+TGG 0.234998 tig0030251:+29929 Msa1442980:three_prime_UTR
GCAGTTCTTCCTTGATATTC+AGG 0.239412 tig0030251:+34098 Msa1442980:three_prime_UTR
AGGCATTCCTCAGTCCTTCT+TGG 0.272680 tig0030251:+29971 Msa1442980:three_prime_UTR
CCTAACAGGTAGAGGCTTAT+TGG 0.279715 tig0030251:-31954 None:intergenic
AAATGATTATCAATTAATTA+AGG 0.283591 tig0030251:+29805 Msa1442980:CDS
TCGATATCACATACCTTTAG+AGG 0.285448 tig0030251:-32007 None:intergenic
TTTACACGTCTTTGACTTCT+TGG 0.292008 tig0030251:+30169 Msa1442980:three_prime_UTR
TTCTCCATATTCTCAATAAA+AGG 0.292427 tig0030251:-29545 None:intergenic
TTTGTGTATTATAGATTTCA+TGG 0.296490 tig0030251:-34453 None:intergenic
GCTGTGGCTTCTGGATCATC+TGG 0.307175 tig0030251:+29770 Msa1442980:CDS
TTGCATCCTATCGTTCATTA+TGG 0.313107 tig0030251:+34302 Msa1442980:three_prime_UTR
TGGGGAAAGAATCTCGTATT+TGG 0.319163 tig0030251:+33776 Msa1442980:three_prime_UTR
CAATGCCGTATGACAGATTA+AGG 0.325118 tig0030251:-29920 None:intergenic
TGATTTACATATCTAAAGTT+TGG 0.332612 tig0030251:+30124 Msa1442980:three_prime_UTR
GTACTTGGTGCAGAAAATTC+AGG 0.337976 tig0030251:+30146 Msa1442980:three_prime_UTR
CCCCTAGCGCAGAGAGATTA+CGG 0.344115 tig0030251:-34264 None:intergenic
TATTCATGATATAAGATGTT+TGG 0.353453 tig0030251:+31555 Msa1442980:three_prime_UTR
ACTGTTGGCTAGGTCATTTA+TGG 0.356342 tig0030251:+30051 Msa1442980:three_prime_UTR
GTATCTCTGTTGGAGAGTTT+GGG 0.359975 tig0030251:+30968 Msa1442980:three_prime_UTR
CTTACTGATTCAAGGACATC+TGG 0.364506 tig0030251:-31637 None:intergenic
TACGTTTCATGTTGTTTCTA+AGG 0.364645 tig0030251:+28069 Msa1442980:CDS
GAGAAGATTGAACAGTTTAG+AGG 0.366538 tig0030251:+27953 Msa1442980:CDS
AGACGAGCAGGGACAAGTTC+TGG 0.377622 tig0030251:+34033 Msa1442980:three_prime_UTR
TGATTGATTGCTTTCTTGCT+TGG 0.378699 tig0030251:+34406 Msa1442980:three_prime_UTR
TACAAGGATAAAGTCATCTA+TGG 0.388281 tig0030251:-31240 None:intergenic
GATCTGTGATGCGCTGGAAC+TGG 0.392381 tig0030251:-27644 None:intergenic
CATATCTAAAGTTTGGTACT+TGG 0.394003 tig0030251:+30131 Msa1442980:three_prime_UTR
TAAAGGTTCTAAAGATTTCA+AGG 0.396291 tig0030251:-31686 None:intergenic
ACAGAAACCCCATTGCTTGA+TGG 0.396330 tig0030251:-28894 None:intergenic
GCACCGGCACTGGGCGCGGA+TGG 0.398104 tig0030251:+31204 Msa1442980:three_prime_UTR
TACTCAACTTGGCTGTCATC+TGG 0.400690 tig0030251:+31152 Msa1442980:three_prime_UTR
GGGAACGAAGGTTCGGAGTT+CGG 0.406934 tig0030251:-27765 None:intergenic
TGCTCTGCCTTACTGATTCA+AGG 0.414153 tig0030251:-31645 None:intergenic
TTGGGACATTGCTTTGTAGA+TGG 0.416385 tig0030251:+29605 Msa1442980:CDS
TAGCAAAGAGAACCTCTCTA+AGG 0.419095 tig0030251:-30202 None:intergenic
ACATATGGTGAGTGCCTAAC+AGG 0.419399 tig0030251:-31968 None:intergenic
TCGCTTGTTGCTATAAAGAA+TGG 0.419457 tig0030251:+27989 Msa1442980:CDS
TGCTTCTGCCAGAGAGACTT+TGG 0.423425 tig0030251:+28033 Msa1442980:CDS
CTTCTGGATCATCTGGGGAT+GGG 0.425767 tig0030251:+29777 Msa1442980:CDS
TTATTGGATATTTCTTCAGC+TGG 0.426378 tig0030251:+29854 Msa1442980:CDS
GGTTCGGAGTTCGGAAATGT+AGG 0.427307 tig0030251:-27756 None:intergenic
AGGGGATAACAGCAACTTAC+AGG 0.428355 tig0030251:+31927 Msa1442980:three_prime_UTR
CACCGGCACTGGGCGCGGAT+GGG 0.429040 tig0030251:+31205 Msa1442980:three_prime_UTR
CTTTAGATATGTAAATCAAA+TGG 0.430979 tig0030251:-30119 None:intergenic
TTCATGAAACAATGGAATCT+TGG 0.432373 tig0030251:+30726 Msa1442980:three_prime_UTR
ATGACAGATTAAGGCTCATA+TGG 0.432475 tig0030251:-29911 None:intergenic
AGTGTCAGACACATTATTAT+CGG 0.433834 tig0030251:-34061 None:intergenic
TAGGATTCGGAATCGAAGTC+AGG 0.434014 tig0030251:-27737 None:intergenic
TACAATCATTGGAATACGCT+TGG 0.434067 tig0030251:+30284 Msa1442980:three_prime_UTR
GCTTCTGGATCATCTGGGGA+TGG 0.434437 tig0030251:+29776 Msa1442980:CDS
CCAATAAGCCTCTACCTGTT+AGG 0.434691 tig0030251:+31954 Msa1442980:three_prime_UTR
GCAGGTTGAGAAACTGATAA+AGG 0.436709 tig0030251:+28812 Msa1442980:intron
CGTAATACTCCCGCAACATA+TGG 0.437801 tig0030251:-31983 None:intergenic
GAGTTCGGAAATGTAGGATT+CGG 0.447772 tig0030251:-27750 None:intergenic
AGCCCATCCGCGCCCAGTGC+CGG 0.448180 tig0030251:-31207 None:intergenic
CACTCGACTCTCATCCTCTC+TGG 0.455521 tig0030251:+27690 Msa1442980:CDS
CATAATACAAGCACCGGCAC+TGG 0.455710 tig0030251:+31194 Msa1442980:three_prime_UTR
CTGTGGCTTCTGGATCATCT+GGG 0.456402 tig0030251:+29771 Msa1442980:CDS
CAAAGCAGTGGTGGAGTCAC+TGG 0.456978 tig0030251:+31714 Msa1442980:three_prime_UTR
CCAAGCTTGCATCTACTAGT+AGG 0.459602 tig0030251:-29586 None:intergenic
GAATTGCCAGTGAGATGAAC+CGG 0.462260 tig0030251:+28973 Msa1442980:CDS
ACAAGCACCGGCACTGGGCG+CGG 0.462642 tig0030251:+31200 Msa1442980:three_prime_UTR
TCTATAATACACAAATTAGT+TGG 0.463359 tig0030251:+34461 Msa1442980:three_prime_UTR
CCCGTAATCTCTCTGCGCTA+GGG 0.463689 tig0030251:+34263 Msa1442980:three_prime_UTR
TCTGTGCAGCAAGTTGAGAA+TGG 0.465124 tig0030251:+28912 Msa1442980:CDS
AAGAAGCTCCAAAGTCTCTC+TGG 0.469395 tig0030251:-28041 None:intergenic
TGGAGAGTTTGGGATTGTGC+TGG 0.471494 tig0030251:+30978 Msa1442980:three_prime_UTR
GGGATAATCTTCTGTATCAA+TGG 0.471575 tig0030251:-29734 None:intergenic
GTACCCTCTGACTGGTCAAA+TGG 0.472322 tig0030251:+28846 Msa1442980:CDS
ACCACTGCTTTGATGACTAA+AGG 0.473079 tig0030251:-31703 None:intergenic
AGGCACTCACCATATGTTGC+GGG 0.475407 tig0030251:+31974 Msa1442980:three_prime_UTR
CTGTGCAGCAAGTTGAGAAT+GGG 0.476048 tig0030251:+28913 Msa1442980:CDS
CTCAGGTTTCAGGAAATAGC+AGG 0.477309 tig0030251:+30848 Msa1442980:intron
CTTAATCTGTCATACGGCAT+TGG 0.480275 tig0030251:+29921 Msa1442980:three_prime_UTR
TCTTGATAATTTGCTTCGCC+AGG 0.482279 tig0030251:-30926 None:intergenic
CCTACTAGTAGATGCAAGCT+TGG 0.482775 tig0030251:+29586 Msa1442980:CDS
ATCGAAGTCAGGGGAGAGGA+AGG 0.486252 tig0030251:-27726 None:intergenic
CCCTAGCGCAGAGAGATTAC+GGG 0.489238 tig0030251:-34263 None:intergenic
TCAGGGGAGAGGAAGGAGGT+AGG 0.492137 tig0030251:-27719 None:intergenic
AGGAATGCCTCAGCAAGGAC+TGG 0.492489 tig0030251:-29958 None:intergenic
TGTTGATGTGGATGCGGCGG+TGG 0.493207 tig0030251:+27898 Msa1442980:CDS
AGAGACTCAAAGTATGCTGC+TGG 0.494446 tig0030251:+28947 Msa1442980:CDS
CTTTAGCCGGTTCATCTCAC+TGG 0.496358 tig0030251:-28979 None:intergenic
TGTCAAAGGGAACGAAGGTT+CGG 0.498537 tig0030251:-27772 None:intergenic
CAGAGTGCACAGAGACGAGC+AGG 0.501222 tig0030251:+34021 Msa1442980:three_prime_UTR
AAAACAAAGTGTATCTCTGT+TGG 0.501400 tig0030251:+30958 Msa1442980:three_prime_UTR
TTGTAGATGGTCTAGAACAC+CGG 0.501648 tig0030251:+29618 Msa1442980:CDS
CCCACATGGGTCATCGGCTG+TGG 0.503279 tig0030251:+29754 Msa1442980:CDS
TACTACATGTACTGTTGGCT+AGG 0.504394 tig0030251:+30041 Msa1442980:three_prime_UTR
AACCTGTGATTATTGTGTAA+AGG 0.505423 tig0030251:-34484 None:intergenic
GGAACTTGTCAGAACAAGAA+AGG 0.506894 tig0030251:-31018 None:intergenic
CTAGGACTTGAGACAGATGA+AGG 0.507871 tig0030251:+31907 Msa1442980:intron
TTCCGATCGGAGTGTGTCAA+AGG 0.511209 tig0030251:-27786 None:intergenic
TGCCTAGTGTACCCTCTGAC+TGG 0.511263 tig0030251:+28838 Msa1442980:CDS
GCCCGTAATCTCTCTGCGCT+AGG 0.511320 tig0030251:+34262 Msa1442980:three_prime_UTR
TCATGATATAAGATGTTTGG+AGG 0.514413 tig0030251:+31558 Msa1442980:three_prime_UTR
ATGTCATTTAATTTCATGCA+AGG 0.515324 tig0030251:+30645 Msa1442980:intron
TGCGCCACTTGTGGAGTTGA+GGG 0.515430 tig0030251:+27931 Msa1442980:CDS
CCTGTCCAAAATTTAGATCC+TGG 0.519380 tig0030251:+30908 Msa1442980:three_prime_UTR
CTTCCAACAGAAAATGCACC+TGG 0.524423 tig0030251:-30239 None:intergenic
GGTTCTCTTTGCTATTCAGA+AGG 0.526000 tig0030251:+30211 Msa1442980:three_prime_UTR
ATGTTGTTCTGCCTATCTGC+TGG 0.527559 tig0030251:-34337 None:intergenic
CAGATGTCCTTGAATCAGTA+AGG 0.528406 tig0030251:+31638 Msa1442980:three_prime_UTR
GTGCGCCACTTGTGGAGTTG+AGG 0.529143 tig0030251:+27930 Msa1442980:CDS
GCGGATGCGTGCGCCACTTG+TGG 0.531183 tig0030251:+27922 Msa1442980:CDS
CCATATTCTCAATAAAAGGC+AGG 0.533344 tig0030251:-29541 None:intergenic
ATTCCATTGTTTCATGAACT+CGG 0.535062 tig0030251:-30721 None:intergenic
TGTAAATTGCAGTTGCATCC+CGG 0.537246 tig0030251:-29637 None:intergenic
TAGAAAGAAGCTGCAAGGAT+AGG 0.547718 tig0030251:-31045 None:intergenic
TTCTCCCTCAACTCCACAAG+TGG 0.548566 tig0030251:-27935 None:intergenic
GCTATTCAGAAGGGAAAGCC+AGG 0.549216 tig0030251:+30221 Msa1442980:three_prime_UTR
GGGAGTATTACGTCCTCTAA+AGG 0.549333 tig0030251:+31994 Msa1442980:three_prime_UTR
TGTTTGGAGGCGCATGTTCG+TGG 0.549872 tig0030251:+31571 Msa1442980:three_prime_UTR
GTGGTGGATCTGTGATGCGC+TGG 0.550028 tig0030251:-27650 None:intergenic
GGCTCATATGGATCCTAAAG+TGG 0.550712 tig0030251:-29899 None:intergenic
AAATGGAGATGTGAATTTGT+CGG 0.550788 tig0030251:+28863 Msa1442980:CDS
AGCTGCCGACCTTGTTACTA+CGG 0.551500 tig0030251:+33866 Msa1442980:three_prime_UTR
TTACTGATTCAAGGACATCT+GGG 0.552406 tig0030251:-31636 None:intergenic
TCCCTTTGACACACTCCGAT+CGG 0.554706 tig0030251:+27784 Msa1442980:CDS
CTACTAGTAGATGCAAGCTT+GGG 0.555531 tig0030251:+29587 Msa1442980:CDS
ATGAGCCTTAATCTGTCATA+CGG 0.556759 tig0030251:+29915 Msa1442980:three_prime_UTR
TCCGATCGGAGTGTGTCAAA+GGG 0.557122 tig0030251:-27785 None:intergenic
GTTCTCTTTGCTATTCAGAA+GGG 0.558787 tig0030251:+30212 Msa1442980:three_prime_UTR
GAACTTGTCAGAACAAGAAA+GGG 0.560737 tig0030251:-31017 None:intergenic
TCATGCCTACCTGAATATCA+AGG 0.561958 tig0030251:-34107 None:intergenic
TTGGTTGTGAGTAGTCAAGA+AGG 0.562668 tig0030251:+33971 Msa1442980:intron
GATTATCCCACATGGGTCAT+CGG 0.563051 tig0030251:+29748 Msa1442980:CDS
GATAGTTGTTTAGTTCCGAT+CGG 0.564647 tig0030251:-27799 None:intergenic
AGTCGAGTGGATCGGAGAAG+AGG 0.565471 tig0030251:-27676 None:intergenic
CGGAATCGAAGTCAGGGGAG+AGG 0.567976 tig0030251:-27730 None:intergenic
GTCATTTATGGTCATGCATG+TGG 0.568198 tig0030251:+30063 Msa1442980:three_prime_UTR
TTATTGAGAATATGGAGAAG+AGG 0.569360 tig0030251:+29549 Msa1442980:CDS
GAACTTACAGATACTCAACT+TGG 0.571437 tig0030251:+31141 Msa1442980:intron
GAGTACAAAGCTTGTTGATG+TGG 0.573440 tig0030251:+27886 Msa1442980:intron
ATGTGGATGCGGCGGTGGTG+CGG 0.574007 tig0030251:+27903 Msa1442980:CDS
CGGCAGCTAATTCATAATAA+CGG 0.574795 tig0030251:-33851 None:intergenic
GGTGAGTGCCTAACAGGTAG+AGG 0.576101 tig0030251:-31962 None:intergenic
ATAATACAAGCACCGGCACT+GGG 0.576760 tig0030251:+31195 Msa1442980:three_prime_UTR
AGTGTGTGGCTCCAGCAGAT+AGG 0.580457 tig0030251:+34326 Msa1442980:three_prime_UTR
AAGAGTCATAATACAAGCAC+CGG 0.580920 tig0030251:+31188 Msa1442980:three_prime_UTR
TGGATCGGAGAAGAGGTTTG+TGG 0.581693 tig0030251:-27669 None:intergenic
TAACGAAATCAGCGTAGTCG+CGG 0.581913 tig0030251:-27859 None:intergenic
GACCATGCCAGTCCTTGCTG+AGG 0.590713 tig0030251:+29951 Msa1442980:three_prime_UTR
TAGGACTTGAGACAGATGAA+GGG 0.594345 tig0030251:+31908 Msa1442980:intron
AGGATTCGGAATCGAAGTCA+GGG 0.595821 tig0030251:-27736 None:intergenic
GTGTAACATAGAACTTTAGC+CGG 0.596405 tig0030251:-28992 None:intergenic
TGTCATCTGGACTGACTGCA+CGG 0.597412 tig0030251:+31165 Msa1442980:three_prime_UTR
GACTGAGGAATGCCTCAGCA+AGG 0.602292 tig0030251:-29963 None:intergenic
AAAGCTTGTTGATGTGGATG+CGG 0.606209 tig0030251:+27892 Msa1442980:intron
CCGTAATCTCTCTGCGCTAG+GGG 0.606581 tig0030251:+34264 Msa1442980:three_prime_UTR
AGGATGAGAGTCGAGTGGAT+CGG 0.607673 tig0030251:-27684 None:intergenic
GGCCAACTCAATCCTTAGAG+AGG 0.608097 tig0030251:+30190 Msa1442980:three_prime_UTR
GGATTCTTACCGTAGTAACA+AGG 0.608299 tig0030251:-33875 None:intergenic
TATGTAAGCATGATATATGT+TGG 0.609353 tig0030251:-30091 None:intergenic
TGTAGATGGTCTAGAACACC+GGG 0.610117 tig0030251:+29619 Msa1442980:CDS
TAGGCACTCACCATATGTTG+CGG 0.611203 tig0030251:+31973 Msa1442980:three_prime_UTR
ACACTGCCATAATGAACGAT+AGG 0.612354 tig0030251:-34308 None:intergenic
GTTCTATGTTACACATGCGA+AGG 0.615933 tig0030251:+29001 Msa1442980:CDS
ACCTTTAGTCATCAAAGCAG+TGG 0.619868 tig0030251:+31702 Msa1442980:three_prime_UTR
AACCTCTCTAAGGATTGAGT+TGG 0.619915 tig0030251:-30192 None:intergenic
AGCAGTGGTGGAGTCACTGG+TGG 0.621318 tig0030251:+31717 Msa1442980:three_prime_UTR
TGACCTAGAAAGAAGCTGCA+AGG 0.627082 tig0030251:-31050 None:intergenic
ATCTCCATTTGACCAGTCAG+AGG 0.627867 tig0030251:-28850 None:intergenic
AGGACTTGAGACAGATGAAG+GGG 0.628043 tig0030251:+31909 Msa1442980:intron
TGCCTCAGCAAGGACTGGCA+TGG 0.630656 tig0030251:-29953 None:intergenic
CAGAGAGGATGAGAGTCGAG+TGG 0.630921 tig0030251:-27689 None:intergenic
TCGTTCATTATGGCAGTGTG+TGG 0.633355 tig0030251:+34312 Msa1442980:three_prime_UTR
TTAAAGACCAAGAAGGACTG+AGG 0.633455 tig0030251:-29978 None:intergenic
GACCAGTCAGAGGGTACACT+AGG 0.634073 tig0030251:-28840 None:intergenic
GAAGTCAGGGGAGAGGAAGG+AGG 0.634937 tig0030251:-27723 None:intergenic
ATCGGAGAAGAGGTTTGTGG+TGG 0.637272 tig0030251:-27666 None:intergenic
AGAGTGCACAGAGACGAGCA+GGG 0.639547 tig0030251:+34022 Msa1442980:three_prime_UTR
TTCAGATCGAAATTTAGCAA+CGG 0.642219 tig0030251:-30688 None:intergenic
TAATGTCAGTTGCTGCACAA+AGG 0.646127 tig0030251:-33824 None:intergenic
TGTGGCTTCTGGATCATCTG+GGG 0.646745 tig0030251:+29772 Msa1442980:CDS
ATACCGAGTTCATGAAACAA+TGG 0.647055 tig0030251:+30718 Msa1442980:three_prime_UTR
GAAGCTGCAAGGATAGGCGA+AGG 0.650298 tig0030251:-31039 None:intergenic
TCTCCATTTGACCAGTCAGA+GGG 0.651774 tig0030251:-28849 None:intergenic
TGGTGATTACTTACAACACG+TGG 0.655831 tig0030251:+31591 Msa1442980:three_prime_UTR
CCACAGCCGATGACCCATGT+GGG 0.659813 tig0030251:-29754 None:intergenic
TTTAGTCATCAAAGCAGTGG+TGG 0.660509 tig0030251:+31705 Msa1442980:three_prime_UTR
TTAGCAACGGCAGATCTAGA+CGG 0.664456 tig0030251:-30675 None:intergenic
TACTGATTCAAGGACATCTG+GGG 0.668471 tig0030251:-31635 None:intergenic
GCTTGTTGATGTGGATGCGG+CGG 0.668676 tig0030251:+27895 Msa1442980:intron
TCAGGTTTCAGGAAATAGCA+GGG 0.674198 tig0030251:+30849 Msa1442980:intron
GAGGTAGGTTTGAACCAGAG+AGG 0.675259 tig0030251:-27704 None:intergenic
TACAGAAGATTATCCCACAT+GGG 0.675357 tig0030251:+29741 Msa1442980:CDS
ATACAGAAGATTATCCCACA+TGG 0.676793 tig0030251:+29740 Msa1442980:CDS
GCCACAGCCGATGACCCATG+TGG 0.679855 tig0030251:-29755 None:intergenic
GAGTGTGTCAAAGGGAACGA+AGG 0.680732 tig0030251:-27777 None:intergenic
TCTTACCGTAGTAACAAGGT+CGG 0.694276 tig0030251:-33871 None:intergenic
GGATTCGGAATCGAAGTCAG+GGG 0.705890 tig0030251:-27735 None:intergenic
TTGCACGTGTGGAGTCAACG+TGG 0.722911 tig0030251:+34374 Msa1442980:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAATTCATCAAATATAAT+TGG + tig0030251:28144-28163 Msa1442980:intron 10.0%
!! GATTAAAAAAAAAAACAAAA+TGG - tig0030251:29045-29064 None:intergenic 10.0%
!!! TACTCAAATTATAATATTTT+AGG + tig0030251:29391-29410 Msa1442980:intron 10.0%
!! AAATGATTATCAATTAATTA+AGG + tig0030251:29805-29824 Msa1442980:CDS 10.0%
!! AAAATTTATTACTAATATAG+GGG - tig0030251:32279-32298 None:intergenic 10.0%
!!! TTTTTTTTTAGAAAAAAGAT+CGG + tig0030251:33002-33021 Msa1442980:intron 10.0%
!! GTTGTTTAATTATAAAAATT+TGG - tig0030251:33319-33338 None:intergenic 10.0%
!!! TTATTATGCTATTGTTTTTT+AGG + tig0030251:28478-28497 Msa1442980:intron 15.0%
!!! CAAAAAAGTGAATTTTATTA+TGG - tig0030251:28712-28731 None:intergenic 15.0%
!!! ATAAAATTCACTTTTTTGAA+AGG + tig0030251:28714-28733 Msa1442980:intron 15.0%
!!! TTTTTATTTTGCATTGATTT+TGG + tig0030251:28740-28759 Msa1442980:intron 15.0%
!! GATCAAATTTATAAATTAGT+TGG + tig0030251:29143-29162 Msa1442980:intron 15.0%
!!! TTCTGAAAGTAAAAAAATAA+AGG + tig0030251:29307-29326 Msa1442980:intron 15.0%
!!! TAAAGACTGTAAATTTTTAT+TGG + tig0030251:29838-29857 Msa1442980:CDS 15.0%
!! ACAATGAATATTCATTAAAT+TGG + tig0030251:31768-31787 Msa1442980:intron 15.0%
!! AAATTTATTACTAATATAGG+GGG - tig0030251:32278-32297 None:intergenic 15.0%
!!! TTTTTAATCTTTAAAGAAAG+AGG + tig0030251:32503-32522 Msa1442980:intron 15.0%
!!! AAATGCTTTTTGTTAAATTT+TGG + tig0030251:32778-32797 Msa1442980:intron 15.0%
!!! TTAATGAAATTTTTATCTCT+TGG + tig0030251:33923-33942 Msa1442980:intron 15.0%
!! AAAAATTCATTTCAAAATCA+AGG - tig0030251:34165-34184 None:intergenic 15.0%
!! AAAAAAAAAAAAAACAGGTT+CGG - tig0030251:34626-34645 None:intergenic 15.0%
!! TAAGCAAGAAAGATAAAAAT+CGG - tig0030251:28103-28122 None:intergenic 20.0%
!!! TATATAGATTTTGTACAATG+TGG + tig0030251:28370-28389 Msa1442980:intron 20.0%
!! TTCAAGTATTCAACAAAAAT+GGG - tig0030251:29093-29112 None:intergenic 20.0%
!! ATTCAAGTATTCAACAAAAA+TGG - tig0030251:29094-29113 None:intergenic 20.0%
!! TTTAGTTATTATACATAACC+AGG + tig0030251:29415-29434 Msa1442980:intron 20.0%
!! TAAACACAAACAGTAAATTA+CGG - tig0030251:29451-29470 None:intergenic 20.0%
!! TGTAGTAAAAAAATGTGAAA+GGG - tig0030251:30028-30047 None:intergenic 20.0%
!! ATGTAGTAAAAAAATGTGAA+AGG - tig0030251:30029-30048 None:intergenic 20.0%
!! CTTTAGATATGTAAATCAAA+TGG - tig0030251:30122-30141 None:intergenic 20.0%
!!! TGATTTACATATCTAAAGTT+TGG + tig0030251:30124-30143 Msa1442980:three_prime_UTR 20.0%
!! TCTTGAAAAATTACAATCAT+TGG + tig0030251:30273-30292 Msa1442980:three_prime_UTR 20.0%
!!! TTTTTCTATGTTAGATCTAA+TGG + tig0030251:28170-28189 Msa1442980:intron 20.0%
!!! ACATTTTCTTGATAATCAAA+TGG - tig0030251:30524-30543 None:intergenic 20.0%
!! ATTTGATTATCAAGAAAATG+TGG + tig0030251:30523-30542 Msa1442980:intron 20.0%
!! TACATACAAAAACAAAGTAA+AGG - tig0030251:31275-31294 None:intergenic 20.0%
!! TATTCATGATATAAGATGTT+TGG + tig0030251:31555-31574 Msa1442980:three_prime_UTR 20.0%
!!! AAAAATATGAATAAGTTGGA+AGG - tig0030251:31871-31890 None:intergenic 20.0%
!! AAGCAAAAATATGAATAAGT+TGG - tig0030251:31875-31894 None:intergenic 20.0%
!! TTAAATACCCCAAATATAAA+AGG + tig0030251:32560-32579 Msa1442980:intron 20.0%
!!! ATGCCAAAAATTGTTTTAAA+CGG - tig0030251:32689-32708 None:intergenic 20.0%
!!! AATCATTTGTTGAATAACAA+TGG + tig0030251:32912-32931 Msa1442980:intron 20.0%
!!! ATCATTTGTTGAATAACAAT+GGG + tig0030251:32913-32932 Msa1442980:intron 20.0%
!! TTAAATACCGTAAAAAACTT+GGG - tig0030251:33177-33196 None:intergenic 20.0%
!!! AATGATGATTCTTTCTTTTT+GGG - tig0030251:33451-33470 None:intergenic 20.0%
!! ATGAAAAATGGAAAGATAAA+TGG + tig0030251:33600-33619 Msa1442980:intron 20.0%
!!! ATACATAACTCAACTTTTTT+GGG - tig0030251:33686-33705 None:intergenic 20.0%
!!! AATACATAACTCAACTTTTT+TGG - tig0030251:33687-33706 None:intergenic 20.0%
!!! TGATAATGCTTAAGAAATTT+TGG + tig0030251:33952-33971 Msa1442980:intron 20.0%
!! TTTGTGTATTATAGATTTCA+TGG - tig0030251:34456-34475 None:intergenic 20.0%
!! TCTATAATACACAAATTAGT+TGG + tig0030251:34461-34480 Msa1442980:three_prime_UTR 20.0%
!! ATAATCGCTTGATAATCAAA+TGG - tig0030251:28204-28223 None:intergenic 25.0%
! TACATAGACTTACTTTAATG+CGG + tig0030251:28433-28452 Msa1442980:intron 25.0%
!!! GTTGTTTATTTTGTCAATGA+AGG + tig0030251:28563-28582 Msa1442980:intron 25.0%
!!! AATGAAGGTTTCTAAAATTG+AGG + tig0030251:28578-28597 Msa1442980:intron 25.0%
!!! ATGAAGGTTTCTAAAATTGA+GGG + tig0030251:28579-28598 Msa1442980:intron 25.0%
! ATCATCTGTACATTATGTTA+TGG + tig0030251:28610-28629 Msa1442980:intron 25.0%
! TCATCTGTACATTATGTTAT+GGG + tig0030251:28611-28630 Msa1442980:intron 25.0%
!!! TTGCATTGATTTTGGAAATT+TGG + tig0030251:28748-28767 Msa1442980:intron 25.0%
!!! TGCATTGATTTTGGAAATTT+GGG + tig0030251:28749-28768 Msa1442980:intron 25.0%
! AAAAAATAAAGGAACCTGAA+AGG + tig0030251:29318-29337 Msa1442980:intron 25.0%
! AAAAATAAAGGAACCTGAAA+GGG + tig0030251:29319-29338 Msa1442980:intron 25.0%
! ATCTATAAATTTCCTGAACA+TGG - tig0030251:29366-29385 None:intergenic 25.0%
! TTCTCCATATTCTCAATAAA+AGG - tig0030251:29548-29567 None:intergenic 25.0%
!! AAAAGTTTCTTCTGCATTTT+TGG - tig0030251:29696-29715 None:intergenic 25.0%
!!! TAACTTTTTCTTACCACTTT+AGG + tig0030251:29886-29905 Msa1442980:CDS 25.0%
!!! CTTTTATTTAAAGACCAAGA+AGG - tig0030251:29988-30007 None:intergenic 25.0%
! GTAGTAAAAAAATGTGAAAG+GGG - tig0030251:30027-30046 None:intergenic 25.0%
!!! TTTTTTACTACATGTACTGT+TGG + tig0030251:30036-30055 Msa1442980:three_prime_UTR 25.0%
! TATGTAAGCATGATATATGT+TGG - tig0030251:30094-30113 None:intergenic 25.0%
!!! TAATTTTTCAAGAACTCTGT+TGG - tig0030251:30266-30285 None:intergenic 25.0%
! AGTTTCTCAAAGTAAGATTA+AGG - tig0030251:30382-30401 None:intergenic 25.0%
! AAGTTAATTGTACTTTGAGT+TGG + tig0030251:30404-30423 Msa1442980:intron 25.0%
!! ATGTCATTTAATTTCATGCA+AGG + tig0030251:30645-30664 Msa1442980:intron 25.0%
! TATCTGTAAGTTCAAAAAAG+AGG - tig0030251:31134-31153 None:intergenic 25.0%
!!! ACACAATTGTTATTTCATCA+TGG - tig0030251:31451-31470 None:intergenic 25.0%
!!! TAAAGGTTCTAAAGATTTCA+AGG - tig0030251:31689-31708 None:intergenic 25.0%
!! TGTGATATCGATTAAGTTTA+TGG + tig0030251:32019-32038 Msa1442980:intron 25.0%
!! TAGAGAAAGCTTTAACATTT+AGG + tig0030251:32155-32174 Msa1442980:intron 25.0%
!! TTCCTACTCCTTTTATATTT+GGG - tig0030251:32571-32590 None:intergenic 25.0%
!!! ATGCCGTTTAAAACAATTTT+TGG + tig0030251:32683-32702 Msa1442980:intron 25.0%
!!! TTCTTACTCCATTTTTCTTT+GGG - tig0030251:32727-32746 None:intergenic 25.0%
!!! ATTCTTACTCCATTTTTCTT+TGG - tig0030251:32728-32747 None:intergenic 25.0%
! AAAATGGAGTAAGAATCTAA+AGG + tig0030251:32732-32751 Msa1442980:intron 25.0%
! AAATGGAGTAAGAATCTAAA+GGG + tig0030251:32733-32752 Msa1442980:intron 25.0%
!!! TTAACAAAAAGCATTTGTGT+GGG - tig0030251:32774-32793 None:intergenic 25.0%
!!! TTTAACAAAAAGCATTTGTG+TGG - tig0030251:32775-32794 None:intergenic 25.0%
!!! TGCTTTTTGTTAAATTTTGG+TGG + tig0030251:32781-32800 Msa1442980:intron 25.0%
!!! GCTTTTTGTTAAATTTTGGT+GGG + tig0030251:32782-32801 Msa1442980:intron 25.0%
!! AGGCATTAAAATTTCACTTT+TGG + tig0030251:32817-32836 Msa1442980:intron 25.0%
!! TGAATAACAATGGGTATTTT+TGG + tig0030251:32922-32941 Msa1442980:intron 25.0%
!!! GGTATTTTTGGAATATAAAG+TGG + tig0030251:32934-32953 Msa1442980:intron 25.0%
!!! TTTTTTAGAAAAAAGATCGG+AGG + tig0030251:33005-33024 Msa1442980:intron 25.0%
!!! TTTTTAGAAAAAAGATCGGA+GGG + tig0030251:33006-33025 Msa1442980:intron 25.0%
! AAAATACAGTAGTCAGTTTA+TGG - tig0030251:33132-33151 None:intergenic 25.0%
! GTTAAATACCGTAAAAAACT+TGG - tig0030251:33178-33197 None:intergenic 25.0%
! GGTATTTAACAACTATTGTT+AGG + tig0030251:33188-33207 Msa1442980:intron 25.0%
! ATTTAACAACTATTGTTAGG+TGG + tig0030251:33191-33210 Msa1442980:intron 25.0%
! TTTAACAACTATTGTTAGGT+GGG + tig0030251:33192-33211 Msa1442980:intron 25.0%
! TGATTACTACATGTTCATTT+AGG + tig0030251:33248-33267 Msa1442980:intron 25.0%
! ATTAAACAACTATTGTTGTG+TGG + tig0030251:33329-33348 Msa1442980:intron 25.0%
! TTAAACAACTATTGTTGTGT+GGG + tig0030251:33330-33349 Msa1442980:intron 25.0%
! TACTCGTTATTATGATCTAT+TGG + tig0030251:33354-33373 Msa1442980:intron 25.0%
!! CAATGATGATTCTTTCTTTT+TGG - tig0030251:33452-33471 None:intergenic 25.0%
! AAATTGAATCCAATCTGATA+TGG + tig0030251:33521-33540 Msa1442980:intron 25.0%
!!! TTTGGTTTCCTATTTTAAGA+GGG - tig0030251:33644-33663 None:intergenic 25.0%
!!! TTTTGGTTTCCTATTTTAAG+AGG - tig0030251:33645-33664 None:intergenic 25.0%
! CATTAATGTAGTCTCTATAT+TGG + tig0030251:33732-33751 Msa1442980:intron 25.0%
!!! ACAAAGGAGTATTTCATTTT+TGG - tig0030251:33811-33830 None:intergenic 25.0%
! GTAATTTCATCAAAGTAGTT+TGG - tig0030251:33899-33918 None:intergenic 25.0%
!!! TATCTAAAAGAAAGCATTCA+CGG - tig0030251:34207-34226 None:intergenic 25.0%
! AGGAGAACCTAAAATATAAA+GGG - tig0030251:34529-34548 None:intergenic 25.0%
! AAGGAGAACCTAAAATATAA+AGG - tig0030251:34530-34549 None:intergenic 25.0%
!! TACGTTTCATGTTGTTTCTA+AGG + tig0030251:28069-28088 Msa1442980:CDS 30.0%
! GCAAATATGTGTTGTTATGT+CGG + tig0030251:28312-28331 Msa1442980:intron 30.0%
! AGATTTTGTACAATGTGGTA+TGG + tig0030251:28375-28394 Msa1442980:intron 30.0%
!!! TAGGTTAACTTGTGTAGTTT+TGG + tig0030251:28497-28516 Msa1442980:intron 30.0%
!!! AGGTTAACTTGTGTAGTTTT+GGG + tig0030251:28498-28517 Msa1442980:intron 30.0%
!! TGAAGGTTTCTAAAATTGAG+GGG + tig0030251:28580-28599 Msa1442980:intron 30.0%
!!! GCATTGATTTTGGAAATTTG+GGG + tig0030251:28750-28769 Msa1442980:intron 30.0%
AAATGGAGATGTGAATTTGT+CGG + tig0030251:28863-28882 Msa1442980:CDS 30.0%
AGAAAAATCCATCAAGCAAT+GGG + tig0030251:28886-28905 Msa1442980:CDS 30.0%
! ATATACCATTTTGCAAGCTA+CGG + tig0030251:29231-29250 Msa1442980:intron 30.0%
TCAGAATGCTAATTAATCAG+TGG - tig0030251:29293-29312 None:intergenic 30.0%
TTATTGAGAATATGGAGAAG+AGG + tig0030251:29549-29568 Msa1442980:CDS 30.0%
!!! TGCATTTTTGGTGTTATCAA+TGG - tig0030251:29684-29703 None:intergenic 30.0%
TTATTGGATATTTCTTCAGC+TGG + tig0030251:29854-29873 Msa1442980:CDS 30.0%
TGGTAAGAAAAAGTTAGATG+AGG - tig0030251:29882-29901 None:intergenic 30.0%
! CATATCTAAAGTTTGGTACT+TGG + tig0030251:30131-30150 Msa1442980:three_prime_UTR 30.0%
TTAAGGAAATATGCCATACT+CGG - tig0030251:30365-30384 None:intergenic 30.0%
TTCAGATCGAAATTTAGCAA+CGG - tig0030251:30691-30710 None:intergenic 30.0%
ATTCCATTGTTTCATGAACT+CGG - tig0030251:30724-30743 None:intergenic 30.0%
TTCATGAAACAATGGAATCT+TGG + tig0030251:30726-30745 Msa1442980:three_prime_UTR 30.0%
TACCTGAATTATTAGCGATA+TGG + tig0030251:30806-30825 Msa1442980:intron 30.0%
ATCCATATCGCTAATAATTC+AGG - tig0030251:30811-30830 None:intergenic 30.0%
AAAACAAAGTGTATCTCTGT+TGG + tig0030251:30958-30977 Msa1442980:three_prime_UTR 30.0%
TGTAAGTTCAAAAAAGAGGT+TGG - tig0030251:31130-31149 None:intergenic 30.0%
TACAAGGATAAAGTCATCTA+TGG - tig0030251:31243-31262 None:intergenic 30.0%
TGAAGACTTGAAGTAAATCT+AGG + tig0030251:31324-31343 Msa1442980:intron 30.0%
! TTTTGAACCAAATCCTCAAA+CGG - tig0030251:31420-31439 None:intergenic 30.0%
! GAGGATTTGGTTCAAAAAAA+TGG + tig0030251:31423-31442 Msa1442980:intron 30.0%
! ATATCCTCATTTTGCATATC+GGG - tig0030251:31488-31507 None:intergenic 30.0%
! CATATCCTCATTTTGCATAT+CGG - tig0030251:31489-31508 None:intergenic 30.0%
TCATGATATAAGATGTTTGG+AGG + tig0030251:31558-31577 Msa1442980:three_prime_UTR 30.0%
!! TGGTTCAAGTTTTATCTTCA+TGG + tig0030251:31611-31630 Msa1442980:three_prime_UTR 30.0%
TTGCTTGTACGAAATAATCT+AGG + tig0030251:31889-31908 Msa1442980:intron 30.0%
TTAGCTGGATTTAAAGACAA+CGG + tig0030251:32085-32104 Msa1442980:intron 30.0%
GATGTTGATATAATTCTGGT+AGG + tig0030251:32108-32127 Msa1442980:intron 30.0%
! AGCTTTAACATTTAGGTGAT+TGG + tig0030251:32162-32181 Msa1442980:intron 30.0%
ACTCAGTGTCTCTTATAAAT+AGG - tig0030251:32209-32228 None:intergenic 30.0%
GAGACACTGAGTTTATTTAT+AGG + tig0030251:32217-32236 Msa1442980:intron 30.0%
ATTAATGACTATCGTTGTAC+GGG - tig0030251:32325-32344 None:intergenic 30.0%
CATTAATGACTATCGTTGTA+CGG - tig0030251:32326-32345 None:intergenic 30.0%
! GTTTGATTTAAATTGTCCCA+TGG - tig0030251:32416-32435 None:intergenic 30.0%
TGGGACAATTTAAATCAAAC+TGG + tig0030251:32416-32435 Msa1442980:intron 30.0%
TCGAATAAATAGCATTAGCT+GGG - tig0030251:32530-32549 None:intergenic 30.0%
TTCGAATAAATAGCATTAGC+TGG - tig0030251:32531-32550 None:intergenic 30.0%
! TCCTACTCCTTTTATATTTG+GGG - tig0030251:32570-32589 None:intergenic 30.0%
! GTTCCTACTCCTTTTATATT+TGG - tig0030251:32572-32591 None:intergenic 30.0%
! CAATCTCTTTCTTTTGCATT+TGG + tig0030251:32611-32630 Msa1442980:intron 30.0%
! ATTCAAAAGTTTTGCGAATC+AGG - tig0030251:32645-32664 None:intergenic 30.0%
AATAACTACTTTGATGTACG+AGG + tig0030251:32958-32977 Msa1442980:intron 30.0%
!!! AGTCAATCCCAAGTTTTTTA+CGG + tig0030251:33167-33186 Msa1442980:intron 30.0%
TGAACATGTAATAATCCTGT+CGG - tig0030251:33384-33403 None:intergenic 30.0%
GGATTATTACATGTTCATGT+AGG + tig0030251:33387-33406 Msa1442980:intron 30.0%
!! ACACAAGAGTGTTCAAAATT+GGG - tig0030251:33565-33584 None:intergenic 30.0%
!! TACACAAGAGTGTTCAAAAT+TGG - tig0030251:33566-33585 None:intergenic 30.0%
TCTAATTCCCCTCTTAAAAT+AGG + tig0030251:33633-33652 Msa1442980:intron 30.0%
!! TTGGTTTCCTATTTTAAGAG+GGG - tig0030251:33643-33662 None:intergenic 30.0%
! GGTTCATCATCTTAATCTTT+TGG - tig0030251:33662-33681 None:intergenic 30.0%
AGTGTCAGACACATTATTAT+CGG - tig0030251:34064-34083 None:intergenic 30.0%
AACCTGTGATTATTGTGTAA+AGG - tig0030251:34487-34506 None:intergenic 30.0%
AATAATCACAGGTTCTTTGA+AGG + tig0030251:34493-34512 Msa1442980:intron 30.0%
ATAATCACAGGTTCTTTGAA+GGG + tig0030251:34494-34513 Msa1442980:intron 30.0%
AGAACCTAAAATATAAAGGG+GGG - tig0030251:34526-34545 None:intergenic 30.0%
GAGAACCTAAAATATAAAGG+GGG - tig0030251:34527-34546 None:intergenic 30.0%
GGAGAACCTAAAATATAAAG+GGG - tig0030251:34528-34547 None:intergenic 30.0%
! GATAGTTGTTTAGTTCCGAT+CGG - tig0030251:27802-27821 None:intergenic 35.0%
GAGAAGATTGAACAGTTTAG+AGG + tig0030251:27953-27972 Msa1442980:CDS 35.0%
! TCGCTTGTTGCTATAAAGAA+TGG + tig0030251:27989-28008 Msa1442980:CDS 35.0%
TCTATATAGCACCAACACTT+CGG - tig0030251:28358-28377 None:intergenic 35.0%
!!! GGTTAACTTGTGTAGTTTTG+GGG + tig0030251:28499-28518 Msa1442980:intron 35.0%
TTAGTATCAGTTCCATTGCT+AGG + tig0030251:28522-28541 Msa1442980:intron 35.0%
CCTAAACTTAAACCTAGCAA+TGG - tig0030251:28537-28556 None:intergenic 35.0%
! CCATTGCTAGGTTTAAGTTT+AGG + tig0030251:28534-28553 Msa1442980:intron 35.0%
! TGCTAGGTTTAAGTTTAGGT+TGG + tig0030251:28538-28557 Msa1442980:intron 35.0%
! AAATTTGGGGTTGAGAGATA+GGG + tig0030251:28763-28782 Msa1442980:intron 35.0%
CAAGATTCATTCACAATTGC+AGG + tig0030251:28794-28813 Msa1442980:intron 35.0%
GAGAAAAATCCATCAAGCAA+TGG + tig0030251:28885-28904 Msa1442980:CDS 35.0%
GAAAAATCCATCAAGCAATG+GGG + tig0030251:28887-28906 Msa1442980:CDS 35.0%
GTGTAACATAGAACTTTAGC+CGG - tig0030251:28995-29014 None:intergenic 35.0%
! TGAAATTGTTTGCTGAAGCT+TGG + tig0030251:29193-29212 Msa1442980:intron 35.0%
! TTGTGAATTTTGTCCCTTTC+AGG - tig0030251:29335-29354 None:intergenic 35.0%
ACAAAAAGATAGCCATGTTC+AGG + tig0030251:29351-29370 Msa1442980:intron 35.0%
CCATATTCTCAATAAAAGGC+AGG - tig0030251:29544-29563 None:intergenic 35.0%
! CCTGCCTTTTATTGAGAATA+TGG + tig0030251:29541-29560 Msa1442980:CDS 35.0%
GGGATAATCTTCTGTATCAA+TGG - tig0030251:29737-29756 None:intergenic 35.0%
ATACAGAAGATTATCCCACA+TGG + tig0030251:29740-29759 Msa1442980:CDS 35.0%
TACAGAAGATTATCCCACAT+GGG + tig0030251:29741-29760 Msa1442980:CDS 35.0%
ATGACAGATTAAGGCTCATA+TGG - tig0030251:29914-29933 None:intergenic 35.0%
ATGAGCCTTAATCTGTCATA+CGG + tig0030251:29915-29934 Msa1442980:three_prime_UTR 35.0%
! TTTACACGTCTTTGACTTCT+TGG + tig0030251:30169-30188 Msa1442980:three_prime_UTR 35.0%
!! GTTCTCTTTGCTATTCAGAA+GGG + tig0030251:30212-30231 Msa1442980:three_prime_UTR 35.0%
TACAATCATTGGAATACGCT+TGG + tig0030251:30284-30303 Msa1442980:three_prime_UTR 35.0%
ATACCGAGTTCATGAAACAA+TGG + tig0030251:30718-30737 Msa1442980:three_prime_UTR 35.0%
! CAGGATCTAAATTTTGGACA+GGG - tig0030251:30910-30929 None:intergenic 35.0%
GAACTTGTCAGAACAAGAAA+GGG - tig0030251:31020-31039 None:intergenic 35.0%
! CTTCTTTCTAGGTCAGTTTT+AGG + tig0030251:31058-31077 Msa1442980:intron 35.0%
GAACTTACAGATACTCAACT+TGG + tig0030251:31141-31160 Msa1442980:intron 35.0%
AAGAGTCATAATACAAGCAC+CGG + tig0030251:31188-31207 Msa1442980:three_prime_UTR 35.0%
! TTTTTCCAAAGTTCCGTTTG+AGG + tig0030251:31404-31423 Msa1442980:intron 35.0%
ATTACCCGATATGCAAAATG+AGG + tig0030251:31481-31500 Msa1442980:intron 35.0%
TACCTAGATCATAATAGACG+TGG + tig0030251:31518-31537 Msa1442980:intron 35.0%
TTCCACGTCTATTATGATCT+AGG - tig0030251:31523-31542 None:intergenic 35.0%
ATAGACGTGGAATCATTTGT+AGG + tig0030251:31531-31550 Msa1442980:intron 35.0%
!! TTACTGATTCAAGGACATCT+GGG - tig0030251:31639-31658 None:intergenic 35.0%
TTGGTTGCATTATTCAGATC+CGG + tig0030251:31787-31806 Msa1442980:intron 35.0%
ATTGCAAATATATGCATCCC+CGG - tig0030251:31809-31828 None:intergenic 35.0%
! AATAAGTTGGAAGGAAACCA+GGG - tig0030251:31862-31881 None:intergenic 35.0%
TCGATATCACATACCTTTAG+AGG - tig0030251:32010-32029 None:intergenic 35.0%
ACCACGAAAAGAAGTAATCA+GGG - tig0030251:32059-32078 None:intergenic 35.0%
AACCACGAAAAGAAGTAATC+AGG - tig0030251:32060-32079 None:intergenic 35.0%
! TTACTTCTTTTCGTGGTTAC+TGG + tig0030251:32062-32081 Msa1442980:intron 35.0%
TAGCTGGATTTAAAGACAAC+GGG + tig0030251:32086-32105 Msa1442980:intron 35.0%
ACGGGATGTTGATATAATTC+TGG + tig0030251:32104-32123 Msa1442980:intron 35.0%
CTCTTATAAATAGGACAGGA+GGG - tig0030251:32200-32219 None:intergenic 35.0%
TCTCTTATAAATAGGACAGG+AGG - tig0030251:32201-32220 None:intergenic 35.0%
GTGTCTCTTATAAATAGGAC+AGG - tig0030251:32204-32223 None:intergenic 35.0%
TACTAATATAGGGGGATTGA+AGG - tig0030251:32270-32289 None:intergenic 35.0%
TTAATGACTATCGTTGTACG+GGG - tig0030251:32324-32343 None:intergenic 35.0%
TAAATTGTCCCATGGTTCAA+TGG - tig0030251:32408-32427 None:intergenic 35.0%
!! GTGTTCTAGTTTGTATCTAG+TGG + tig0030251:32478-32497 Msa1442980:intron 35.0%
ACCCCAAATATAAAAGGAGT+AGG + tig0030251:32566-32585 Msa1442980:intron 35.0%
ATAAAAGGAGTAGGAACTAG+AGG + tig0030251:32575-32594 Msa1442980:intron 35.0%
TAAAAGGAGTAGGAACTAGA+GGG + tig0030251:32576-32595 Msa1442980:intron 35.0%
! TCTCTTTCTTTTGCATTTGG+TGG + tig0030251:32614-32633 Msa1442980:intron 35.0%
ACACTCAACCCAAAGAAAAA+TGG + tig0030251:32716-32735 Msa1442980:intron 35.0%
!! AAATTTTGGTGGGAAATCCT+TGG + tig0030251:32792-32811 Msa1442980:intron 35.0%
!! GAAATTTTAATGCCTAGCCA+AGG - tig0030251:32812-32831 None:intergenic 35.0%
TGCTTCTCGTTATCAGAAAA+AGG + tig0030251:33090-33109 Msa1442980:intron 35.0%
! TGGGTTGAAATTGAAATGTG+AGG - tig0030251:33299-33318 None:intergenic 35.0%
!!! TCTTTTTGGGTTGAAATGTG+AGG - tig0030251:33438-33457 None:intergenic 35.0%
!!! GTGCTTAGCTTTTTAGTTAG+AGG + tig0030251:33477-33496 Msa1442980:intron 35.0%
TTGAATCCAATCTGATATGG+TGG + tig0030251:33524-33543 Msa1442980:intron 35.0%
TGAATCCAATCTGATATGGT+GGG + tig0030251:33525-33544 Msa1442980:intron 35.0%
!!! CATAACTCAACTTTTTTGGG+AGG - tig0030251:33683-33702 None:intergenic 35.0%
!!! ACATGCAGATGTTTTTGGAT+GGG + tig0030251:33757-33776 Msa1442980:intron 35.0%
CGGCAGCTAATTCATAATAA+CGG - tig0030251:33854-33873 None:intergenic 35.0%
TTCTTCCTTGATATTCAGGT+AGG + tig0030251:34102-34121 Msa1442980:intron 35.0%
TTGCATCCTATCGTTCATTA+TGG + tig0030251:34302-34321 Msa1442980:three_prime_UTR 35.0%
!! TTTTTAAGAGTTTGCACGTG+TGG + tig0030251:34363-34382 Msa1442980:three_prime_UTR 35.0%
TGATTGATTGCTTTCTTGCT+TGG + tig0030251:34406-34425 Msa1442980:three_prime_UTR 35.0%
! TAATCACAGGTTCTTTGAAG+GGG + tig0030251:34495-34514 Msa1442980:intron 35.0%
GAACCTAAAATATAAAGGGG+GGG - tig0030251:34525-34544 None:intergenic 35.0%
GAGTTCGGAAATGTAGGATT+CGG - tig0030251:27753-27772 None:intergenic 40.0%
!! GAGTACAAAGCTTGTTGATG+TGG + tig0030251:27886-27905 Msa1442980:intron 40.0%
!! AAAGCTTGTTGATGTGGATG+CGG + tig0030251:27892-27911 Msa1442980:intron 40.0%
TCATCTTCAATCCGAAGTGT+TGG + tig0030251:28344-28363 Msa1442980:intron 40.0%
TGCGGTGTATTTGTTTGTGT+TGG + tig0030251:28451-28470 Msa1442980:intron 40.0%
! GAAATTTGGGGTTGAGAGAT+AGG + tig0030251:28762-28781 Msa1442980:intron 40.0%
! GCAGGTTGAGAAACTGATAA+AGG + tig0030251:28812-28831 Msa1442980:intron 40.0%
GTTCTATGTTACACATGCGA+AGG + tig0030251:29001-29020 Msa1442980:CDS 40.0%
AATTACGGACATTCAATGCC+TGG - tig0030251:29436-29455 None:intergenic 40.0%
ATAAAAGGCAGGTTCTGTAC+TGG - tig0030251:29533-29552 None:intergenic 40.0%
CTACTAGTAGATGCAAGCTT+GGG + tig0030251:29587-29606 Msa1442980:CDS 40.0%
TTGGGACATTGCTTTGTAGA+TGG + tig0030251:29605-29624 Msa1442980:CDS 40.0%
! TTGTAGATGGTCTAGAACAC+CGG + tig0030251:29618-29637 Msa1442980:CDS 40.0%
TGTAAATTGCAGTTGCATCC+CGG - tig0030251:29640-29659 None:intergenic 40.0%
!!! AACTTTTCGAGTGACTGTTG+TGG + tig0030251:29709-29728 Msa1442980:CDS 40.0%
CAATGCCGTATGACAGATTA+AGG - tig0030251:29923-29942 None:intergenic 40.0%
CTTAATCTGTCATACGGCAT+TGG + tig0030251:29921-29940 Msa1442980:three_prime_UTR 40.0%
TTAAAGACCAAGAAGGACTG+AGG - tig0030251:29981-30000 None:intergenic 40.0%
! TACTACATGTACTGTTGGCT+AGG + tig0030251:30041-30060 Msa1442980:three_prime_UTR 40.0%
! ACTGTTGGCTAGGTCATTTA+TGG + tig0030251:30051-30070 Msa1442980:three_prime_UTR 40.0%
GTCATTTATGGTCATGCATG+TGG + tig0030251:30063-30082 Msa1442980:three_prime_UTR 40.0%
!! GTACTTGGTGCAGAAAATTC+AGG + tig0030251:30146-30165 Msa1442980:three_prime_UTR 40.0%
! AACCTCTCTAAGGATTGAGT+TGG - tig0030251:30195-30214 None:intergenic 40.0%
TAGCAAAGAGAACCTCTCTA+AGG - tig0030251:30205-30224 None:intergenic 40.0%
!! GGTTCTCTTTGCTATTCAGA+AGG + tig0030251:30211-30230 Msa1442980:three_prime_UTR 40.0%
! TTGGAGCGTATTTTTCTGTG+AGG + tig0030251:30745-30764 Msa1442980:three_prime_UTR 40.0%
GGTGATTCTCTTCTTTACGA+TGG + tig0030251:30766-30785 Msa1442980:intron 40.0%
CTCATATCTTCAATTGCCTC+AGG + tig0030251:30831-30850 Msa1442980:intron 40.0%
TCAGGTTTCAGGAAATAGCA+GGG + tig0030251:30849-30868 Msa1442980:intron 40.0%
! CCAGGATCTAAATTTTGGAC+AGG - tig0030251:30911-30930 None:intergenic 40.0%
CCTGTCCAAAATTTAGATCC+TGG + tig0030251:30908-30927 Msa1442980:three_prime_UTR 40.0%
! CTTCGCCAGGATCTAAATTT+TGG - tig0030251:30916-30935 None:intergenic 40.0%
!! TCTTGATAATTTGCTTCGCC+AGG - tig0030251:30929-30948 None:intergenic 40.0%
TGTATCTCTGTTGGAGAGTT+TGG + tig0030251:30967-30986 Msa1442980:three_prime_UTR 40.0%
GTATCTCTGTTGGAGAGTTT+GGG + tig0030251:30968-30987 Msa1442980:three_prime_UTR 40.0%
GGAACTTGTCAGAACAAGAA+AGG - tig0030251:31021-31040 None:intergenic 40.0%
TAGAAAGAAGCTGCAAGGAT+AGG - tig0030251:31048-31067 None:intergenic 40.0%
TATCCTTGCAGCTTCTTTCT+AGG + tig0030251:31047-31066 Msa1442980:three_prime_UTR 40.0%
!!! CTTTCTAGGTCAGTTTTAGG+TGG + tig0030251:31061-31080 Msa1442980:intron 40.0%
! GTAAAGGCATGATGCATACA+AGG - tig0030251:31259-31278 None:intergenic 40.0%
AGTCTTCAGCATACAGATGT+GGG - tig0030251:31312-31331 None:intergenic 40.0%
AAGTCTTCAGCATACAGATG+TGG - tig0030251:31313-31332 None:intergenic 40.0%
CAAATCCTCAAACGGAACTT+TGG - tig0030251:31412-31431 None:intergenic 40.0%
CAAAGTTCCGTTTGAGGATT+TGG + tig0030251:31410-31429 Msa1442980:intron 40.0%
TGGTGATTACTTACAACACG+TGG + tig0030251:31591-31610 Msa1442980:three_prime_UTR 40.0%
!! TACTGATTCAAGGACATCTG+GGG - tig0030251:31638-31657 None:intergenic 40.0%
!! CTTACTGATTCAAGGACATC+TGG - tig0030251:31640-31659 None:intergenic 40.0%
CAGATGTCCTTGAATCAGTA+AGG + tig0030251:31638-31657 Msa1442980:three_prime_UTR 40.0%
ACCTTTAGTCATCAAAGCAG+TGG + tig0030251:31702-31721 Msa1442980:three_prime_UTR 40.0%
! ACCACTGCTTTGATGACTAA+AGG - tig0030251:31706-31725 None:intergenic 40.0%
TTTAGTCATCAAAGCAGTGG+TGG + tig0030251:31705-31724 Msa1442980:three_prime_UTR 40.0%
TGGTTGCATTATTCAGATCC+GGG + tig0030251:31788-31807 Msa1442980:intron 40.0%
! ATAAGTTGGAAGGAAACCAG+GGG - tig0030251:31861-31880 None:intergenic 40.0%
! GAATAAGTTGGAAGGAAACC+AGG - tig0030251:31863-31882 None:intergenic 40.0%
TAGGACTTGAGACAGATGAA+GGG + tig0030251:31908-31927 Msa1442980:intron 40.0%
! ACCCTGATTACTTCTTTTCG+TGG + tig0030251:32055-32074 Msa1442980:intron 40.0%
!!! TTTTTTGTGCCACATGCATG+GGG - tig0030251:32377-32396 None:intergenic 40.0%
!!! CTTTTTTGTGCCACATGCAT+GGG - tig0030251:32378-32397 None:intergenic 40.0%
AAAAGGAGTAGGAACTAGAG+GGG + tig0030251:32577-32596 Msa1442980:intron 40.0%
!!! TTGTTAGGTGGGCTACTTTT+AGG + tig0030251:33203-33222 Msa1442980:intron 40.0%
TTTAGGTATCACTGCTTCTG+TGG + tig0030251:33265-33284 Msa1442980:intron 40.0%
TTAGGTATCACTGCTTCTGT+GGG + tig0030251:33266-33285 Msa1442980:intron 40.0%
!!! TAGCTTTTTAGTTAGAGGCC+AGG + tig0030251:33482-33501 Msa1442980:intron 40.0%
!!! AGCTTTTTAGTTAGAGGCCA+GGG + tig0030251:33483-33502 Msa1442980:intron 40.0%
ATCTGCAGCGCTATGAAAAA+TGG + tig0030251:33588-33607 Msa1442980:intron 40.0%
! TGGTGACATGCAGATGTTTT+TGG + tig0030251:33752-33771 Msa1442980:intron 40.0%
!!! GACATGCAGATGTTTTTGGA+TGG + tig0030251:33756-33775 Msa1442980:intron 40.0%
!!! CATGCAGATGTTTTTGGATG+GGG + tig0030251:33758-33777 Msa1442980:intron 40.0%
TGGGGAAAGAATCTCGTATT+TGG + tig0030251:33776-33795 Msa1442980:three_prime_UTR 40.0%
TAATGTCAGTTGCTGCACAA+AGG - tig0030251:33827-33846 None:intergenic 40.0%
TCTTACCGTAGTAACAAGGT+CGG - tig0030251:33874-33893 None:intergenic 40.0%
GGATTCTTACCGTAGTAACA+AGG - tig0030251:33878-33897 None:intergenic 40.0%
TTGGTTGTGAGTAGTCAAGA+AGG + tig0030251:33971-33990 Msa1442980:intron 40.0%
GCAGTTCTTCCTTGATATTC+AGG + tig0030251:34098-34117 Msa1442980:three_prime_UTR 40.0%
TCATGCCTACCTGAATATCA+AGG - tig0030251:34110-34129 None:intergenic 40.0%
ACACTGCCATAATGAACGAT+AGG - tig0030251:34311-34330 None:intergenic 40.0%
GGCCTTTACACAATAATCAC+AGG + tig0030251:34482-34501 Msa1442980:intron 40.0%
! TCTCCCCCCCTTTATATTTT+AGG + tig0030251:34519-34538 Msa1442980:intron 40.0%
TTAGGTTCTCCTTCATCACT+AGG + tig0030251:34537-34556 Msa1442980:intron 40.0%
TTCTCCTTCATCACTAGGAT+AGG + tig0030251:34542-34561 Msa1442980:intron 40.0%
AGAACCTATCCTAGTGATGA+AGG - tig0030251:34549-34568 None:intergenic 40.0%
TCATCACTAGGATAGGTTCT+CGG + tig0030251:34549-34568 Msa1442980:intron 40.0%
AGGATTCGGAATCGAAGTCA+GGG - tig0030251:27739-27758 None:intergenic 45.0%
TAGGATTCGGAATCGAAGTC+AGG - tig0030251:27740-27759 None:intergenic 45.0%
TGTCAAAGGGAACGAAGGTT+CGG - tig0030251:27775-27794 None:intergenic 45.0%
TAACGAAATCAGCGTAGTCG+CGG - tig0030251:27862-27881 None:intergenic 45.0%
AAGAAGCTCCAAAGTCTCTC+TGG - tig0030251:28044-28063 None:intergenic 45.0%
CTTCGGATTGAAGATGAGTC+TGG - tig0030251:28341-28360 None:intergenic 45.0%
TCTCCATTTGACCAGTCAGA+GGG - tig0030251:28852-28871 None:intergenic 45.0%
ATCTCCATTTGACCAGTCAG+AGG - tig0030251:28853-28872 None:intergenic 45.0%
ACAGAAACCCCATTGCTTGA+TGG - tig0030251:28897-28916 None:intergenic 45.0%
! TCTGTGCAGCAAGTTGAGAA+TGG + tig0030251:28912-28931 Msa1442980:CDS 45.0%
! CTGTGCAGCAAGTTGAGAAT+GGG + tig0030251:28913-28932 Msa1442980:CDS 45.0%
AGAGACTCAAAGTATGCTGC+TGG + tig0030251:28947-28966 Msa1442980:CDS 45.0%
GAATTGCCAGTGAGATGAAC+CGG + tig0030251:28973-28992 Msa1442980:CDS 45.0%
! TACCATTTTGCAAGCTACGG+TGG + tig0030251:29234-29253 Msa1442980:intron 45.0%
! ACCATTTTGCAAGCTACGGT+GGG + tig0030251:29235-29254 Msa1442980:intron 45.0%
! AAGCTACGGTGGGTGTTTTT+CGG + tig0030251:29245-29264 Msa1442980:intron 45.0%
CCAAGCTTGCATCTACTAGT+AGG - tig0030251:29589-29608 None:intergenic 45.0%
CCTACTAGTAGATGCAAGCT+TGG + tig0030251:29586-29605 Msa1442980:CDS 45.0%
! TGTAGATGGTCTAGAACACC+GGG + tig0030251:29619-29638 Msa1442980:CDS 45.0%
GATTATCCCACATGGGTCAT+CGG + tig0030251:29748-29767 Msa1442980:CDS 45.0%
GGCTCATATGGATCCTAAAG+TGG - tig0030251:29902-29921 None:intergenic 45.0%
!! GTCATACGGCATTGGTTTCT+TGG + tig0030251:29929-29948 Msa1442980:three_prime_UTR 45.0%
! AAGCCAGGTGCATTTTCTGT+TGG + tig0030251:30236-30255 Msa1442980:three_prime_UTR 45.0%
CTTCCAACAGAAAATGCACC+TGG - tig0030251:30242-30261 None:intergenic 45.0%
TTAGCAACGGCAGATCTAGA+CGG - tig0030251:30678-30697 None:intergenic 45.0%
CTTCAATTGCCTCAGGTTTC+AGG + tig0030251:30838-30857 Msa1442980:intron 45.0%
!! CTGCTATTTCCTGAAACCTG+AGG - tig0030251:30850-30869 None:intergenic 45.0%
CTCAGGTTTCAGGAAATAGC+AGG + tig0030251:30848-30867 Msa1442980:intron 45.0%
! ATTTTGGACAGGGACAACAC+TGG - tig0030251:30900-30919 None:intergenic 45.0%
TGACCTAGAAAGAAGCTGCA+AGG - tig0030251:31053-31072 None:intergenic 45.0%
TACTCAACTTGGCTGTCATC+TGG + tig0030251:31152-31171 Msa1442980:three_prime_UTR 45.0%
!! ATAATACAAGCACCGGCACT+GGG + tig0030251:31195-31214 Msa1442980:three_prime_UTR 45.0%
!! TGCTCTGCCTTACTGATTCA+AGG - tig0030251:31648-31667 None:intergenic 45.0%
!! AGGCAGAGCATTTTACAGAG+TGG + tig0030251:31658-31677 Msa1442980:three_prime_UTR 45.0%
ACTGGTGGAAAAATCAGTCG+AGG + tig0030251:31732-31751 Msa1442980:three_prime_UTR 45.0%
GTGGAAAAATCAGTCGAGGT+AGG + tig0030251:31736-31755 Msa1442980:intron 45.0%
GGTTGCATTATTCAGATCCG+GGG + tig0030251:31789-31808 Msa1442980:intron 45.0%
! TAAGTTGGAAGGAAACCAGG+GGG - tig0030251:31860-31879 None:intergenic 45.0%
CTAGGACTTGAGACAGATGA+AGG + tig0030251:31907-31926 Msa1442980:intron 45.0%
AGGACTTGAGACAGATGAAG+GGG + tig0030251:31909-31928 Msa1442980:intron 45.0%
AGGGGATAACAGCAACTTAC+AGG + tig0030251:31927-31946 Msa1442980:three_prime_UTR 45.0%
CCTAACAGGTAGAGGCTTAT+TGG - tig0030251:31957-31976 None:intergenic 45.0%
CCAATAAGCCTCTACCTGTT+AGG + tig0030251:31954-31973 Msa1442980:three_prime_UTR 45.0%
ACATATGGTGAGTGCCTAAC+AGG - tig0030251:31971-31990 None:intergenic 45.0%
TAGGCACTCACCATATGTTG+CGG + tig0030251:31973-31992 Msa1442980:three_prime_UTR 45.0%
CGTAATACTCCCGCAACATA+TGG - tig0030251:31986-32005 None:intergenic 45.0%
!! GGGAGTATTACGTCCTCTAA+AGG + tig0030251:31994-32013 Msa1442980:three_prime_UTR 45.0%
! TTTCGTGGTTACTGGTTAGC+TGG + tig0030251:32070-32089 Msa1442980:intron 45.0%
!!! CCTTTTTTGTGCCACATGCA+TGG - tig0030251:32379-32398 None:intergenic 45.0%
CCATGCATGTGGCACAAAAA+AGG + tig0030251:32376-32395 Msa1442980:intron 45.0%
AGGTAGTCACCATTGAACCA+TGG + tig0030251:32396-32415 Msa1442980:intron 45.0%
GGTAGTCACCATTGAACCAT+GGG + tig0030251:32397-32416 Msa1442980:intron 45.0%
AACACTGCTGTCACAAACAC+TGG - tig0030251:32463-32482 None:intergenic 45.0%
TGATCTATTGGAAGTCCGAC+AGG + tig0030251:33366-33385 Msa1442980:intron 45.0%
AATGTGAGGCCAAAGGTTCA+CGG - tig0030251:33424-33443 None:intergenic 45.0%
! ATCCAATCTGATATGGTGGG+TGG + tig0030251:33528-33547 Msa1442980:intron 45.0%
CACATGCAACATGCAAGACA+TGG + tig0030251:34136-34155 Msa1442980:intron 45.0%
!! AGAAAGCATTCACGGTTTGC+AGG - tig0030251:34199-34218 None:intergenic 45.0%
GGTGACGATATGTAAGAGGA+AGG - tig0030251:34234-34253 None:intergenic 45.0%
TCCTCTTACATATCGTCACC+AGG + tig0030251:34234-34253 Msa1442980:intron 45.0%
! TCCTGGTGACGATATGTAAG+AGG - tig0030251:34238-34257 None:intergenic 45.0%
TCGTTCATTATGGCAGTGTG+TGG + tig0030251:34312-34331 Msa1442980:three_prime_UTR 45.0%
ATGTTGTTCTGCCTATCTGC+TGG - tig0030251:34340-34359 None:intergenic 45.0%
AGGTTCTCGGTTGTTATCTC+TGG + tig0030251:34562-34581 Msa1442980:intron 45.0%
!! ATTAAAAAAAAAAACAAAAT+GGG - tig0030251:29044-29063 None:intergenic 5.0%
!! TAATTATAATTAAATAGAAT+TGG + tig0030251:30464-30483 Msa1442980:intron 5.0%
!! TAAAATTTATTACTAATATA+GGG - tig0030251:32280-32299 None:intergenic 5.0%
!! ATAAAATTTATTACTAATAT+AGG - tig0030251:32281-32300 None:intergenic 5.0%
!! TTGTTTAATTATAAAAATTT+GGG - tig0030251:33318-33337 None:intergenic 5.0%
ATCGGAGAAGAGGTTTGTGG+TGG - tig0030251:27669-27688 None:intergenic 50.0%
TGGATCGGAGAAGAGGTTTG+TGG - tig0030251:27672-27691 None:intergenic 50.0%
AGGATGAGAGTCGAGTGGAT+CGG - tig0030251:27687-27706 None:intergenic 50.0%
GAGGTAGGTTTGAACCAGAG+AGG - tig0030251:27707-27726 None:intergenic 50.0%
GGATTCGGAATCGAAGTCAG+GGG - tig0030251:27738-27757 None:intergenic 50.0%
GGTTCGGAGTTCGGAAATGT+AGG - tig0030251:27759-27778 None:intergenic 50.0%
GAGTGTGTCAAAGGGAACGA+AGG - tig0030251:27780-27799 None:intergenic 50.0%
TCCCTTTGACACACTCCGAT+CGG + tig0030251:27784-27803 Msa1442980:CDS 50.0%
TCCGATCGGAGTGTGTCAAA+GGG - tig0030251:27788-27807 None:intergenic 50.0%
TTCCGATCGGAGTGTGTCAA+AGG - tig0030251:27789-27808 None:intergenic 50.0%
TTCTCCCTCAACTCCACAAG+TGG - tig0030251:27938-27957 None:intergenic 50.0%
TGCTTCTGCCAGAGAGACTT+TGG + tig0030251:28033-28052 Msa1442980:CDS 50.0%
GGGGTTGAGAGATAGGGAAT+TGG + tig0030251:28769-28788 Msa1442980:intron 50.0%
! GTACCCTCTGACTGGTCAAA+TGG + tig0030251:28846-28865 Msa1442980:CDS 50.0%
! CTTTAGCCGGTTCATCTCAC+TGG - tig0030251:28982-29001 None:intergenic 50.0%
! GTTTGCTGAAGCTTGGTGAG+AGG + tig0030251:29200-29219 Msa1442980:intron 50.0%
! ACCCACCGTAGCTTGCAAAA+TGG - tig0030251:29239-29258 None:intergenic 50.0%
! AGCTACGGTGGGTGTTTTTC+GGG + tig0030251:29246-29265 Msa1442980:intron 50.0%
CTGTGGCTTCTGGATCATCT+GGG + tig0030251:29771-29790 Msa1442980:CDS 50.0%
TGTGGCTTCTGGATCATCTG+GGG + tig0030251:29772-29791 Msa1442980:CDS 50.0%
CTTCTGGATCATCTGGGGAT+GGG + tig0030251:29777-29796 Msa1442980:CDS 50.0%
AGGCATTCCTCAGTCCTTCT+TGG + tig0030251:29971-29990 Msa1442980:three_prime_UTR 50.0%
GGCCAACTCAATCCTTAGAG+AGG + tig0030251:30190-30209 Msa1442980:three_prime_UTR 50.0%
GCTATTCAGAAGGGAAAGCC+AGG + tig0030251:30221-30240 Msa1442980:three_prime_UTR 50.0%
! TGGAGAGTTTGGGATTGTGC+TGG + tig0030251:30978-30997 Msa1442980:three_prime_UTR 50.0%
TGTCATCTGGACTGACTGCA+CGG + tig0030251:31165-31184 Msa1442980:three_prime_UTR 50.0%
!! CATAATACAAGCACCGGCAC+TGG + tig0030251:31194-31213 Msa1442980:three_prime_UTR 50.0%
TTTCTACCTTTGCTTCCCCC+TGG + tig0030251:31842-31861 Msa1442980:intron 50.0%
AGGCACTCACCATATGTTGC+GGG + tig0030251:31974-31993 Msa1442980:three_prime_UTR 50.0%
GGGGATGGGTGTGGAAATAA+GGG - tig0030251:32358-32377 None:intergenic 50.0%
TGGGGATGGGTGTGGAAATA+AGG - tig0030251:32359-32378 None:intergenic 50.0%
TTGGTGGGAAATCCTTGGCT+AGG + tig0030251:32797-32816 Msa1442980:intron 50.0%
TCACTGCTTCTGTGGGCATT+TGG + tig0030251:33273-33292 Msa1442980:intron 50.0%
TCACTGCTTCCGTGAACCTT+TGG + tig0030251:33412-33431 Msa1442980:intron 50.0%
GGGTTGAAATGTGAGGCCAA+AGG - tig0030251:33431-33450 None:intergenic 50.0%
TTGCATGAGCGTAGTTTCCC+TGG - tig0030251:33503-33522 None:intergenic 50.0%
TGCCACCCACCATATCAGAT+TGG - tig0030251:33533-33552 None:intergenic 50.0%
AGCTGCCGACCTTGTTACTA+CGG + tig0030251:33866-33885 Msa1442980:three_prime_UTR 50.0%
AGAGATTACGGGCATACTCC+TGG - tig0030251:34255-34274 None:intergenic 50.0%
GATCTGTGATGCGCTGGAAC+TGG - tig0030251:27647-27666 None:intergenic 55.0%
AGTCGAGTGGATCGGAGAAG+AGG - tig0030251:27679-27698 None:intergenic 55.0%
CAGAGAGGATGAGAGTCGAG+TGG - tig0030251:27692-27711 None:intergenic 55.0%
CACTCGACTCTCATCCTCTC+TGG + tig0030251:27690-27709 Msa1442980:CDS 55.0%
ATCGAAGTCAGGGGAGAGGA+AGG - tig0030251:27729-27748 None:intergenic 55.0%
GGGAACGAAGGTTCGGAGTT+CGG - tig0030251:27768-27787 None:intergenic 55.0%
! GCTTGTTGATGTGGATGCGG+CGG + tig0030251:27895-27914 Msa1442980:intron 55.0%
TGCGCCACTTGTGGAGTTGA+GGG + tig0030251:27931-27950 Msa1442980:CDS 55.0%
TGCCTAGTGTACCCTCTGAC+TGG + tig0030251:28838-28857 Msa1442980:CDS 55.0%
! GACCAGTCAGAGGGTACACT+AGG - tig0030251:28843-28862 None:intergenic 55.0%
! TGAAGCTTGGTGAGAGGCGA+AGG + tig0030251:29206-29225 Msa1442980:intron 55.0%
! GAAGCTTGGTGAGAGGCGAA+GGG + tig0030251:29207-29226 Msa1442980:intron 55.0%
GCTGTGGCTTCTGGATCATC+TGG + tig0030251:29770-29789 Msa1442980:CDS 55.0%
GCTTCTGGATCATCTGGGGA+TGG + tig0030251:29776-29795 Msa1442980:CDS 55.0%
AGGAATGCCTCAGCAAGGAC+TGG - tig0030251:29961-29980 None:intergenic 55.0%
GACTGAGGAATGCCTCAGCA+AGG - tig0030251:29966-29985 None:intergenic 55.0%
GAAGCTGCAAGGATAGGCGA+AGG - tig0030251:31042-31061 None:intergenic 55.0%
! TGTTTGGAGGCGCATGTTCG+TGG + tig0030251:31571-31590 Msa1442980:three_prime_UTR 55.0%
! CAAAGCAGTGGTGGAGTCAC+TGG + tig0030251:31714-31733 Msa1442980:three_prime_UTR 55.0%
AGGAAACCAGGGGGAAGCAA+AGG - tig0030251:31851-31870 None:intergenic 55.0%
GGTGAGTGCCTAACAGGTAG+AGG - tig0030251:31965-31984 None:intergenic 55.0%
TGTGCCACATGCATGGGGAT+GGG - tig0030251:32372-32391 None:intergenic 55.0%
TTGTGCCACATGCATGGGGA+TGG - tig0030251:32373-32392 None:intergenic 55.0%
AGAGTGCACAGAGACGAGCA+GGG + tig0030251:34022-34041 Msa1442980:three_prime_UTR 55.0%
AGACGAGCAGGGACAAGTTC+TGG + tig0030251:34033-34052 Msa1442980:three_prime_UTR 55.0%
CCCTAGCGCAGAGAGATTAC+GGG - tig0030251:34266-34285 None:intergenic 55.0%
CCCGTAATCTCTCTGCGCTA+GGG + tig0030251:34263-34282 Msa1442980:three_prime_UTR 55.0%
CCCCTAGCGCAGAGAGATTA+CGG - tig0030251:34267-34286 None:intergenic 55.0%
CCGTAATCTCTCTGCGCTAG+GGG + tig0030251:34264-34283 Msa1442980:three_prime_UTR 55.0%
AGTGTGTGGCTCCAGCAGAT+AGG + tig0030251:34326-34345 Msa1442980:three_prime_UTR 55.0%
TTGCACGTGTGGAGTCAACG+TGG + tig0030251:34374-34393 Msa1442980:three_prime_UTR 55.0%
!! GTGGTGGATCTGTGATGCGC+TGG - tig0030251:27653-27672 None:intergenic 60.0%
TCAGGGGAGAGGAAGGAGGT+AGG - tig0030251:27722-27741 None:intergenic 60.0%
GAAGTCAGGGGAGAGGAAGG+AGG - tig0030251:27726-27745 None:intergenic 60.0%
CGGAATCGAAGTCAGGGGAG+AGG - tig0030251:27733-27752 None:intergenic 60.0%
TGTTGATGTGGATGCGGCGG+TGG + tig0030251:27898-27917 Msa1442980:CDS 60.0%
GTGCGCCACTTGTGGAGTTG+AGG + tig0030251:27930-27949 Msa1442980:CDS 60.0%
CCACAGCCGATGACCCATGT+GGG - tig0030251:29757-29776 None:intergenic 60.0%
GACCATGCCAGTCCTTGCTG+AGG + tig0030251:29951-29970 Msa1442980:three_prime_UTR 60.0%
! TGCCTCAGCAAGGACTGGCA+TGG - tig0030251:29956-29975 None:intergenic 60.0%
ACGCTTGGACTTGCACGCGA+AGG + tig0030251:30299-30318 Msa1442980:intron 60.0%
CGCTTGGACTTGCACGCGAA+GGG + tig0030251:30300-30319 Msa1442980:intron 60.0%
GCTTGGACTTGCACGCGAAG+GGG + tig0030251:30301-30320 Msa1442980:intron 60.0%
TCTCTCGTGTCGAGCCGAAG+AGG - tig0030251:30329-30348 None:intergenic 60.0%
! TCTTCGGCTCGACACGAGAG+AGG + tig0030251:30328-30347 Msa1442980:intron 60.0%
! CTTCGGCTCGACACGAGAGA+GGG + tig0030251:30329-30348 Msa1442980:intron 60.0%
GGGCTACGCTCTTCCGAGTA+TGG + tig0030251:30349-30368 Msa1442980:intron 60.0%
! AGCAGTGGTGGAGTCACTGG+TGG + tig0030251:31717-31736 Msa1442980:three_prime_UTR 60.0%
CACATGCATGGGGATGGGTG+TGG - tig0030251:32367-32386 None:intergenic 60.0%
CACACCCATCCCCATGCATG+TGG + tig0030251:32365-32384 Msa1442980:intron 60.0%
CAGAGTGCACAGAGACGAGC+AGG + tig0030251:34021-34040 Msa1442980:three_prime_UTR 60.0%
GCCCGTAATCTCTCTGCGCT+AGG + tig0030251:34262-34281 Msa1442980:three_prime_UTR 60.0%
ATGTGGATGCGGCGGTGGTG+CGG + tig0030251:27903-27922 Msa1442980:CDS 65.0%
! CCCACATGGGTCATCGGCTG+TGG + tig0030251:29754-29773 Msa1442980:CDS 65.0%
GCCACAGCCGATGACCCATG+TGG - tig0030251:29758-29777 None:intergenic 65.0%
! GGGTCATCGGCTGTGGCTTC+TGG + tig0030251:29761-29780 Msa1442980:CDS 65.0%
!! CACGCGAAGGGGTGCCTCTT+CGG + tig0030251:30312-30331 Msa1442980:intron 65.0%
GCGGATGCGTGCGCCACTTG+TGG + tig0030251:27922-27941 Msa1442980:CDS 70.0%
!! ACAAGCACCGGCACTGGGCG+CGG + tig0030251:31200-31219 Msa1442980:three_prime_UTR 70.0%
! CACCGGCACTGGGCGCGGAT+GGG + tig0030251:31205-31224 Msa1442980:three_prime_UTR 75.0%
AGCCCATCCGCGCCCAGTGC+CGG - tig0030251:31210-31229 None:intergenic 75.0%
!! GCACCGGCACTGGGCGCGGA+TGG + tig0030251:31204-31223 Msa1442980:three_prime_UTR 80.0%
Chromosome Type Strat End Strand Name
tig0030251 gene 27635 34646 27635 ID=Msa1442980;Name=Msa1442980
tig0030251 mRNA 27635 34646 27635 ID=Msa1442980-mRNA-1;Parent=Msa1442980;Name=Msa1442980-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.91|0.84|1|0.83|0.69|13|1674|337
tig0030251 exon 27635 27877 27635 ID=Msa1442980-mRNA-1:exon:13633;Parent=Msa1442980-mRNA-1
tig0030251 exon 27896 28090 27896 ID=Msa1442980-mRNA-1:exon:13634;Parent=Msa1442980-mRNA-1
tig0030251 exon 28816 29022 28816 ID=Msa1442980-mRNA-1:exon:13635;Parent=Msa1442980-mRNA-1
tig0030251 exon 29539 30310 29539 ID=Msa1442980-mRNA-1:exon:13636;Parent=Msa1442980-mRNA-1
tig0030251 exon 30657 30766 30657 ID=Msa1442980-mRNA-1:exon:13637;Parent=Msa1442980-mRNA-1
tig0030251 exon 30853 31068 30853 ID=Msa1442980-mRNA-1:exon:13638;Parent=Msa1442980-mRNA-1
tig0030251 exon 31151 31259 31151 ID=Msa1442980-mRNA-1:exon:13639;Parent=Msa1442980-mRNA-1
tig0030251 exon 31553 31753 31553 ID=Msa1442980-mRNA-1:exon:13640;Parent=Msa1442980-mRNA-1
tig0030251 exon 31911 32015 31911 ID=Msa1442980-mRNA-1:exon:13641;Parent=Msa1442980-mRNA-1
tig0030251 exon 33765 33887 33765 ID=Msa1442980-mRNA-1:exon:13642;Parent=Msa1442980-mRNA-1
tig0030251 exon 33985 34119 33985 ID=Msa1442980-mRNA-1:exon:13643;Parent=Msa1442980-mRNA-1
tig0030251 exon 34256 34493 34256 ID=Msa1442980-mRNA-1:exon:13644;Parent=Msa1442980-mRNA-1
tig0030251 exon 34613 34646 34613 ID=Msa1442980-mRNA-1:exon:13645;Parent=Msa1442980-mRNA-1
tig0030251 CDS 27635 27877 27635 ID=Msa1442980-mRNA-1:cds;Parent=Msa1442980-mRNA-1
tig0030251 CDS 27896 28090 27896 ID=Msa1442980-mRNA-1:cds;Parent=Msa1442980-mRNA-1
tig0030251 CDS 28816 29022 28816 ID=Msa1442980-mRNA-1:cds;Parent=Msa1442980-mRNA-1
tig0030251 CDS 29539 29907 29539 ID=Msa1442980-mRNA-1:cds;Parent=Msa1442980-mRNA-1
tig0030251 three_prime_UTR 29908 30310 29908 ID=Msa1442980-mRNA-1:three_prime_utr;Parent=Msa1442980-mRNA-1
tig0030251 three_prime_UTR 30657 30766 30657 ID=Msa1442980-mRNA-1:three_prime_utr;Parent=Msa1442980-mRNA-1
tig0030251 three_prime_UTR 30853 31068 30853 ID=Msa1442980-mRNA-1:three_prime_utr;Parent=Msa1442980-mRNA-1
tig0030251 three_prime_UTR 31151 31259 31151 ID=Msa1442980-mRNA-1:three_prime_utr;Parent=Msa1442980-mRNA-1
tig0030251 three_prime_UTR 31553 31753 31553 ID=Msa1442980-mRNA-1:three_prime_utr;Parent=Msa1442980-mRNA-1
tig0030251 three_prime_UTR 31911 32015 31911 ID=Msa1442980-mRNA-1:three_prime_utr;Parent=Msa1442980-mRNA-1
tig0030251 three_prime_UTR 33765 33887 33765 ID=Msa1442980-mRNA-1:three_prime_utr;Parent=Msa1442980-mRNA-1
tig0030251 three_prime_UTR 33985 34119 33985 ID=Msa1442980-mRNA-1:three_prime_utr;Parent=Msa1442980-mRNA-1
tig0030251 three_prime_UTR 34256 34493 34256 ID=Msa1442980-mRNA-1:three_prime_utr;Parent=Msa1442980-mRNA-1
tig0030251 three_prime_UTR 34613 34646 34613 ID=Msa1442980-mRNA-1:three_prime_utr;Parent=Msa1442980-mRNA-1
Gene Sequence

>Msa1442980

ATGGCGGATCCAGTTCCAGCGCATCACAGATCCACCACAAACCTCTTCTCCGATCCACTCGACTCTCATCCTCTCTGGTTCAAACCTACCTCCTTCCTCTCCCCTGACTTCGATTCCGAATCCTACATTTCCGAACTCCGAACCTTCGTTCCCTTTGACACACTCCGATCGGAACTAAACAACTATCTCTCATCGTTAAATCACGAGCTCATTGATCTAATCAACCGCGACTACGCTGATTTCCTTGTTGATGTGGATGCGGCGGTGGTGCGGATGCGTGCGCCACTTGTGGAGTTGAGGGAGAAGATTGAACAGTTTAGAGGTTCTGTTGATGTTTCGCTTGTTGCTATAAAGAATGGTTTGAAGCAACGATCTGAAGCTGCTTCTGCCAGAGAGACTTTGGAGCTTCTTCTTGATACGTTTCATGTTGTTTCTAAGGTTGAGAAACTGATAAAGGAGCTGCCTAGTGTACCCTCTGACTGGTCAAATGGAGATGTGAATTTGTCGGAGAAAAATCCATCAAGCAATGGGGTTTCTGTGCAGCAAGTTGAGAATGGGACAAGTGTCAGAGAGACTCAAAGTATGCTGCTGGAAAGAATTGCCAGTGAGATGAACCGGCTAAAGTTCTATGTTACACATGCGAAGAACCTGCCTTTTATTGAGAATATGGAGAAGAGGATTCAAAATGCAAGCCTACTAGTAGATGCAAGCTTGGGACATTGCTTTGTAGATGGTCTAGAACACCGGGATGCAACTGCAATTTACAATTGCTTACGTGCATATGCTGCCATTGATAACACCAAAAATGCAGAAGAAACTTTTCGAGTGACTGTTGTGGCTCCATTGATACAGAAGATTATCCCACATGGGTCATCGGCTGTGGCTTCTGGATCATCTGGGGATGGGCTTGAAAATGATTATCAATTAATTAAGGAGTGCGTTTATAAAGACTGTAAATTTTTATTGGATATTTCTTCAGCTGGTACCTCATCTAACTTTTTCTTACCACTTTAG
Protein sequence

>Msa1442980

MADPVPAHHRSTTNLFSDPLDSHPLWFKPTSFLSPDFDSESYISELRTFVPFDTLRSELNNYLSSLNHELIDLINRDYADFLVDVDAAVVRMRAPLVELREKIEQFRGSVDVSLVAIKNGLKQRSEAASARETLELLLDTFHVVSKVEKLIKELPSVPSDWSNGDVNLSEKNPSSNGVSVQQVENGTSVRETQSMLLERIASEMNRLKFYVTHAKNLPFIENMEKRIQNASLLVDASLGHCFVDGLEHRDATAIYNCLRAYAAIDNTKNAEETFRVTVVAPLIQKIIPHGSSAVASGSSGDGLENDYQLIKECVYKDCKFLLDISSAGTSSNFFLPL*