AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1405060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1405060 MtrunA17_Chr2g0309561 91.781 511 38 3 1 510 1 508 0.0 917
Msa1405060 MtrunA17_Chr5g0442921 27.096 513 295 15 34 510 84 553 1.40e-36 142
Msa1405060 MtrunA17_Chr3g0130931 27.680 513 281 22 14 511 12 449 2.92e-36 140
Msa1405060 MtrunA17_Chr3g0095891 27.235 481 278 14 63 511 19 459 3.75e-34 134
Msa1405060 MtrunA17_Chr6g0484901 26.407 462 263 17 61 510 95 491 1.23e-33 133
Msa1405060 MtrunA17_Chr7g0275731 28.638 426 237 17 95 510 116 484 5.45e-32 128
Msa1405060 MtrunA17_Chr1g0210201 27.206 408 225 14 112 510 123 467 4.46e-31 125
Msa1405060 MtrunA17_Chr3g0099891 26.471 408 227 12 113 510 110 454 1.39e-30 124
Msa1405060 MtrunA17_Chr3g0099901 27.451 408 231 13 112 510 134 485 1.49e-29 121
Msa1405060 MtrunA17_Chr8g0352671 28.288 403 228 15 117 510 86 436 1.79e-29 120
Msa1405060 MtrunA17_Chr5g0395931 28.186 408 220 16 118 510 86 435 3.13e-27 114
Msa1405060 MtrunA17_Chr5g0435871 27.665 394 236 12 119 510 88 434 3.24e-27 114
Msa1405060 MtrunA17_Chr8g0352661 27.251 411 223 17 119 511 85 437 6.94e-27 113
Msa1405060 MtrunA17_Chr5g0415951 28.753 393 230 14 121 510 89 434 1.13e-26 112
Msa1405060 MtrunA17_Chr5g0435971 27.411 394 237 12 119 510 85 431 1.42e-26 112
Msa1405060 MtrunA17_Chr1g0212321 25.681 514 296 17 14 510 42 486 2.33e-26 112
Msa1405060 MtrunA17_Chr5g0395911 27.250 400 233 14 118 510 65 413 4.58e-25 107
Msa1405060 MtrunA17_Chr8g0386441 26.952 397 235 15 119 511 85 430 6.56e-25 107
Msa1405060 MtrunA17_Chr1g0165201 24.486 486 277 16 35 510 64 469 1.66e-24 106
Msa1405060 MtrunA17_Chr6g0457401 26.371 474 274 17 46 510 29 436 3.54e-24 105
Msa1405060 MtrunA17_Chr5g0419291 23.669 507 298 17 12 510 3 428 7.40e-24 103
Msa1405060 MtrunA17_Chr6g0486981 26.448 397 238 14 120 510 88 436 8.51e-24 103
Msa1405060 MtrunA17_Chr2g0310831 28.148 405 221 19 119 510 93 440 2.09e-23 102
Msa1405060 MtrunA17_Chr2g0320621 26.588 425 243 14 107 511 63 438 2.35e-23 103
Msa1405060 MtrunA17_Chr5g0434411 27.674 430 232 17 100 511 70 438 6.14e-23 101
Msa1405060 MtrunA17_Chr3g0087851 26.250 400 237 15 119 510 87 436 6.38e-22 98.2
Msa1405060 MtrunA17_Chr4g0027681 23.821 403 256 10 119 511 76 437 1.14e-21 98.2
Msa1405060 MtrunA17_Chr6g0487471 25.500 400 240 13 119 510 85 434 2.36e-21 96.7
Msa1405060 MtrunA17_Chr2g0333991 22.312 493 282 16 37 508 21 433 2.42e-21 96.7
Msa1405060 MtrunA17_Chr1g0189381 23.041 434 275 14 92 511 42 430 3.74e-21 96.3
Msa1405060 MtrunA17_Chr2g0310801 27.160 486 272 21 36 511 21 434 4.68e-21 95.9
Msa1405060 MtrunA17_Chr2g0291201 25.121 414 243 16 110 510 92 451 6.42e-21 95.5
Msa1405060 MtrunA17_Chr2g0310821 25.458 491 265 23 36 511 39 443 6.89e-21 95.1
Msa1405060 MtrunA17_Chr7g0267171 25.537 419 243 16 119 510 89 465 2.51e-20 94.0
Msa1405060 MtrunA17_Chr7g0265331 24.402 418 262 13 106 511 66 441 6.20e-19 89.7
Msa1405060 MtrunA17_Chr2g0308001 26.551 403 232 16 120 510 58 408 6.90e-19 89.4
Msa1405060 MtrunA17_Chr2g0311451 22.653 490 288 17 37 510 21 435 9.70e-19 88.6
Msa1405060 MtrunA17_Chr1g0179751 23.843 432 277 12 92 511 79 470 1.41e-18 88.6
Msa1405060 MtrunA17_Chr5g0401601 23.951 405 244 11 119 511 87 439 1.58e-18 89.0
Msa1405060 MtrunA17_Chr1g0164401 23.838 495 278 21 26 506 15 424 2.90e-18 87.0
Msa1405060 MtrunA17_Chr5g0395891 29.129 333 193 16 194 510 7 312 3.31e-18 85.5
Msa1405060 MtrunA17_Chr2g0307991 24.810 395 244 13 120 510 59 404 4.12e-18 86.7
Msa1405060 MtrunA17_Chr4g0001991 25.951 447 264 17 73 511 131 518 9.53e-18 86.3
Msa1405060 MtrunA17_Chr7g0221681 23.778 450 275 18 81 511 34 434 1.80e-17 85.1
Msa1405060 MtrunA17_Chr2g0312941 26.034 411 232 17 121 507 88 450 2.54e-17 84.3
Msa1405060 MtrunA17_Chr4g0053721 23.515 404 245 11 119 510 79 430 5.19e-17 84.3
Msa1405060 MtrunA17_Chr8g0352691 27.660 282 158 13 247 511 8 260 6.81e-17 80.9
Msa1405060 MtrunA17_Chr8g0353261 25.513 439 247 18 86 506 53 429 2.16e-16 81.6
Msa1405060 MtrunA17_Chr5g0419151 28.520 277 178 11 239 510 106 367 4.58e-16 79.7
Msa1405060 MtrunA17_Chr8g0390761 23.501 417 248 14 105 511 101 456 6.11e-15 77.0
Msa1405060 MtrunA17_Chr3g0112051 23.399 406 221 17 123 510 76 409 9.21e-14 73.2
Msa1405060 MtrunA17_Chr4g0023351 28.148 270 142 12 120 385 58 279 4.48e-13 70.1
Msa1405060 MtrunA17_Chr3g0133071 29.493 217 130 9 306 511 234 438 9.11e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1405060 AT3G12700.1 35.050 505 254 14 13 511 25 461 1.41e-95 298
Msa1405060 AT3G25700.1 31.090 431 238 15 96 510 62 449 3.53e-47 170
Msa1405060 AT3G18490.1 26.598 485 269 15 36 510 93 500 3.58e-38 146
Msa1405060 AT1G25510.1 27.459 488 288 17 31 510 54 483 4.59e-36 140
Msa1405060 AT1G01300.1 30.266 413 225 16 106 510 127 484 3.38e-35 138
Msa1405060 AT5G10770.1 25.572 481 291 14 38 511 54 474 3.99e-33 132
Msa1405060 AT3G59080.1 27.765 425 234 12 109 510 158 532 7.45e-31 126
Msa1405060 AT2G03200.1 27.536 414 218 18 119 510 105 458 9.83e-31 124
Msa1405060 AT2G42980.1 28.401 419 241 11 109 510 148 524 9.97e-31 125
Msa1405060 AT3G61820.1 27.972 429 244 16 94 510 108 483 2.38e-30 124
Msa1405060 AT1G64830.1 27.494 411 215 16 119 511 84 429 2.41e-29 120
Msa1405060 AT5G33340.1 28.465 404 220 15 119 510 88 434 2.02e-28 117
Msa1405060 AT5G10760.1 26.305 479 266 18 43 510 62 464 5.66e-27 114
Msa1405060 AT2G35615.1 26.357 516 292 18 11 511 2 444 2.85e-25 108
Msa1405060 AT1G09750.1 25.604 414 239 16 110 511 93 449 2.65e-23 102
Msa1405060 AT1G31450.1 27.674 430 248 13 95 511 63 442 4.18e-23 102
Msa1405060 AT1G08210.1 25.553 407 244 11 118 511 81 441 1.21e-22 101
Msa1405060 AT1G08210.3 25.553 407 244 11 118 511 129 489 1.27e-22 101
Msa1405060 AT1G08210.4 25.553 407 244 11 118 511 115 475 1.29e-22 101
Msa1405060 AT5G22850.1 24.505 404 255 10 118 511 78 441 2.63e-22 100
Msa1405060 AT3G20015.1 24.689 482 296 15 35 510 50 470 1.45e-21 97.8
Msa1405060 AT3G54400.1 26.265 415 226 17 110 510 76 424 7.06e-20 92.4
Msa1405060 AT3G59080.2 28.990 307 185 10 224 510 203 496 2.54e-19 91.3
Msa1405060 AT3G02740.1 24.939 413 239 16 117 511 81 440 8.02e-19 89.7
Msa1405060 AT1G08210.2 25.984 381 223 11 118 485 81 415 2.22e-18 88.6
Msa1405060 AT2G28220.1 24.688 401 223 15 121 511 67 398 1.49e-17 85.1
Msa1405060 AT3G02740.2 24.694 409 237 16 121 511 10 365 1.50e-17 85.1
Msa1405060 AT1G66180.1 25.641 429 235 18 103 511 63 427 3.01e-17 84.3
Msa1405060 AT2G36670.2 23.598 428 276 12 93 511 73 458 3.16e-17 84.7
Msa1405060 AT5G07030.1 24.096 415 240 16 110 511 103 455 3.60e-17 84.3
Msa1405060 AT3G25700.2 36.508 126 75 3 384 506 220 343 9.81e-17 82.0
Msa1405060 AT5G43100.1 23.472 409 233 14 119 511 74 418 1.36e-16 83.2
Msa1405060 AT4G30040.1 25.495 404 221 17 121 505 85 427 1.92e-16 82.0
Msa1405060 AT1G77480.1 25.721 416 240 16 112 511 58 420 1.99e-16 82.0
Msa1405060 AT1G77480.2 25.721 416 240 16 112 511 58 420 2.02e-16 82.0
Msa1405060 AT5G43100.2 23.472 409 233 14 119 511 74 418 2.32e-16 82.0
Msa1405060 AT2G36670.1 23.951 405 248 11 121 511 105 463 3.37e-16 81.6
Msa1405060 AT2G36670.4 23.951 405 248 11 121 511 34 392 8.45e-16 80.1
Msa1405060 AT2G36670.3 23.951 405 248 11 121 511 34 392 8.45e-16 80.1
Msa1405060 AT5G36260.1 22.816 412 256 12 114 511 71 434 1.05e-15 80.1
Msa1405060 AT2G23945.1 26.870 361 182 15 108 450 83 379 2.62e-15 78.6
Msa1405060 AT2G28010.1 24.566 403 217 17 121 511 65 392 3.37e-15 77.8
Msa1405060 AT1G05840.1 24.374 439 262 19 92 511 52 439 6.71e-15 77.4
Msa1405060 AT2G28030.1 24.304 395 228 12 121 511 61 388 3.00e-14 75.1
Msa1405060 AT5G02190.1 23.278 421 225 16 130 511 82 443 1.88e-13 72.8
Msa1405060 AT2G28040.2 24.060 399 225 16 120 511 55 382 3.15e-13 71.6
Msa1405060 AT1G79720.1 25.000 420 241 15 107 510 121 482 5.61e-13 71.6
Msa1405060 AT2G28040.1 24.060 399 225 16 120 511 64 391 6.72e-13 70.9
Msa1405060 AT5G45120.1 22.072 444 265 16 110 510 73 478 8.56e-12 67.8

Find 95 sgRNAs with CRISPR-Local

Find 231 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTCCAAACCACCATTATT+TGG 0.151656 tig0023101:-6303 None:intergenic
GAATGATTTGAATCAATAAA+AGG 0.191126 tig0023101:-3170 None:intergenic
GGAACACGTAATTCTATTAT+TGG 0.204040 tig0023101:+6474 Msa1405060:CDS
GAATTACGTGTTCCATTTAC+TGG 0.216571 tig0023101:-6465 None:intergenic
GACAATGCTGGTCTAAAATT+TGG 0.217971 tig0023101:+5949 Msa1405060:CDS
CCTAGGTTAGTGTTTCATTT+TGG 0.230464 tig0023101:+6363 Msa1405060:CDS
GATCAAGTTGAAGCTATAAA+AGG 0.233864 tig0023101:+3300 Msa1405060:CDS
TTATGCAGCAAAATCATCTT+TGG 0.272951 tig0023101:+6502 Msa1405060:CDS
TCACTCAACAATTTGACTTT+TGG 0.277317 tig0023101:-6048 None:intergenic
TCATCTGCTGTGGGATTCTA+TGG 0.294165 tig0023101:+5769 Msa1405060:CDS
TCAGGAAGAGATGTTGAAAT+TGG 0.314062 tig0023101:+3453 Msa1405060:CDS
GTAACATTCACACCATAAAA+TGG 0.329917 tig0023101:-6102 None:intergenic
GTTTCAAGCTACCTAACATT+TGG 0.330880 tig0023101:+6018 Msa1405060:CDS
GAACACCAGGACAAAAGTTT+TGG 0.330929 tig0023101:+3502 Msa1405060:CDS
TCAAAAGGGATATATTTAGA+AGG 0.341495 tig0023101:+3328 Msa1405060:CDS
GAAAATCCCACCAAAGGTTT+GGG 0.350338 tig0023101:+6152 Msa1405060:CDS
ACGATTAATGATCCAAATAA+TGG 0.354193 tig0023101:+6291 Msa1405060:CDS
TGCCTCTACAACAGGATAAT+AGG 0.358648 tig0023101:-6241 None:intergenic
TCATGAAGAGCATGAGAATA+TGG 0.359184 tig0023101:+3221 Msa1405060:CDS
AGGCATGATTCAAGATTTCT+TGG 0.371809 tig0023101:+3270 Msa1405060:CDS
TGAAAATCCCACCAAAGGTT+TGG 0.372838 tig0023101:+6151 Msa1405060:CDS
TGACAATCAGTCAAACTATA+AGG 0.373919 tig0023101:-3774 None:intergenic
ATCCATGCCTTTATGAAGTC+AGG 0.375990 tig0023101:+3808 Msa1405060:CDS
CTCTGATGTTAATGATTCAA+TGG 0.376518 tig0023101:+6752 Msa1405060:three_prime_UTR
AAGCTTCAAAATCAAACAAT+TGG 0.385729 tig0023101:+5835 Msa1405060:CDS
TGATCCAAATAATGGTGGTT+TGG 0.393986 tig0023101:+6299 Msa1405060:CDS
CAAATGGTCAACAAGACAAT+AGG 0.406150 tig0023101:-5983 None:intergenic
TTCAAGAACAAGTGCAGTTA+AGG 0.408146 tig0023101:-6217 None:intergenic
TTGGAGTTGTTCCAAATGTT+AGG 0.416424 tig0023101:-6029 None:intergenic
TATGCAGCAAAATCATCTTT+GGG 0.427055 tig0023101:+6503 Msa1405060:CDS
TTGGTTTAAATGTATGAGAA+AGG 0.428615 tig0023101:+3554 Msa1405060:CDS
GTAATGAAATTGTGAATAAG+AGG 0.431201 tig0023101:-2997 None:intergenic
GGCATGATTCAAGATTTCTT+GGG 0.435229 tig0023101:+3271 Msa1405060:CDS
CATAAACATAATAAACATAA+AGG 0.437149 tig0023101:+3600 Msa1405060:CDS
GCTTCAAAATCCCAAACCTT+TGG 0.441065 tig0023101:-6162 None:intergenic
CTATAAAAGGGTTCGTCAAA+AGG 0.442221 tig0023101:+3313 Msa1405060:CDS
AAACAAACCTGACTTCATAA+AGG 0.442694 tig0023101:-3815 None:intergenic
CATTCATTTGTTGACAATGC+TGG 0.443741 tig0023101:+5937 Msa1405060:CDS
ATATTTGTACTTGTGATTCA+AGG 0.448474 tig0023101:-3023 None:intergenic
GTTGGTGGAATATTAGCCTT+AGG 0.448786 tig0023101:+5904 Msa1405060:CDS
TATTATGTTTATGTTTATGT+TGG 0.454187 tig0023101:-3590 None:intergenic
ATACAGGAAGTGAGTTAACT+TGG 0.474918 tig0023101:+3535 Msa1405060:CDS
GAAATCTTGAATCATGCCTA+TGG 0.478263 tig0023101:-3266 None:intergenic
TCAAAATCCCAAACCTTTGG+TGG 0.478987 tig0023101:-6159 None:intergenic
GAAATGATGGATCAAAGAAT+AGG 0.483791 tig0023101:+3351 Msa1405060:CDS
AATGATTTGAATCAATAAAA+GGG 0.488996 tig0023101:-3169 None:intergenic
ATGTTAATGATTCAATGGTA+TGG 0.492588 tig0023101:+6757 Msa1405060:three_prime_UTR
CTCATACAGCAAGAAGAAGA+AGG 0.494652 tig0023101:+3652 Msa1405060:CDS
TATATTTAGAAGGGAAATGA+TGG 0.495318 tig0023101:+3338 Msa1405060:CDS
ATCAAGTTGAAGCTATAAAA+GGG 0.495500 tig0023101:+3301 Msa1405060:CDS
TATAAAAGGGTTCGTCAAAA+GGG 0.504396 tig0023101:+3314 Msa1405060:CDS
AATAGTGAGAGAGAAGAAAG+AGG 0.509311 tig0023101:-2967 None:intergenic
ATGAATTATCAAGGTGGTCA+TGG 0.510467 tig0023101:+3375 Msa1405060:CDS
TTGATCGTCGACGGAGATGC+CGG 0.510880 tig0023101:-6124 None:intergenic
ATCTTTGACAGCTATGGTAG+TGG 0.513051 tig0023101:+5742 Msa1405060:intron
CAAAATCCCAAACCTTTGGT+GGG 0.519085 tig0023101:-6158 None:intergenic
TGAAGAGGAAATTGATGCAA+TGG 0.528126 tig0023101:+3127 Msa1405060:CDS
AGAATAGGAATGAATTATCA+AGG 0.529627 tig0023101:+3366 Msa1405060:CDS
TTCCCATATGAAAATGTTGG+TGG 0.533682 tig0023101:+5889 Msa1405060:CDS
CAGCATTGTCAACAAATGAA+TGG 0.541187 tig0023101:-5936 None:intergenic
ACTCTCTAGTTGCATGGAGA+AGG 0.546138 tig0023101:-6561 None:intergenic
TGAATGGTGTCTAAAGCCTA+AGG 0.550436 tig0023101:-5920 None:intergenic
TCATAAAGGCATGGATCAGA+AGG 0.555785 tig0023101:-3801 None:intergenic
TCAATGATGTAACTCTTCAC+TGG 0.557173 tig0023101:-6408 None:intergenic
GAAGTTTGCTTTGATGCAGA+AGG 0.557366 tig0023101:+6321 Msa1405060:CDS
CAAAAGGGATATATTTAGAA+GGG 0.558091 tig0023101:+3329 Msa1405060:CDS
TATTTGTACTTGTGATTCAA+GGG 0.559719 tig0023101:-3022 None:intergenic
GGTTTCCCATATGAAAATGT+TGG 0.562696 tig0023101:+5886 Msa1405060:CDS
AGAACAACTCTCTAGTTGCA+TGG 0.577195 tig0023101:-6567 None:intergenic
GCATGATTCAAGATTTCTTG+GGG 0.578453 tig0023101:+3272 Msa1405060:CDS
TATCTAATATGCAAATGAAG+AGG 0.579339 tig0023101:+3112 Msa1405060:exon
AAACATAATAAACATAAAGG+AGG 0.582793 tig0023101:+3603 Msa1405060:CDS
GGTGTTACAGTTGGAACACC+AGG 0.586302 tig0023101:+3489 Msa1405060:CDS
TCATACAGCAAGAAGAAGAA+GGG 0.591156 tig0023101:+3653 Msa1405060:CDS
AGCCTATTATCCTGTTGTAG+AGG 0.592083 tig0023101:+6239 Msa1405060:CDS
TAATGAAATTGTGAATAAGA+GGG 0.593140 tig0023101:-2996 None:intergenic
TTTCAGCATTTGATCGTCGA+CGG 0.594223 tig0023101:-6133 None:intergenic
GAAGGGATGATCATTGACTC+AGG 0.595985 tig0023101:+6189 Msa1405060:CDS
AACCTGACTTCATAAAGGCA+TGG 0.599467 tig0023101:-3810 None:intergenic
CCAAAATGAAACACTAACCT+AGG 0.600070 tig0023101:-6363 None:intergenic
ATTAATGATCCAAATAATGG+TGG 0.600681 tig0023101:+6294 Msa1405060:CDS
TGTTAATGATTCAATGGTAT+GGG 0.605609 tig0023101:+6758 Msa1405060:three_prime_UTR
AACATAATAAACATAAAGGA+GGG 0.609603 tig0023101:+3604 Msa1405060:CDS
AATGCTGAAAATCCCACCAA+AGG 0.615934 tig0023101:+6146 Msa1405060:CDS
CAATCAGTGATAAATAGTCC+AGG 0.618605 tig0023101:+5865 Msa1405060:CDS
TGAGTCTAGAACTTATCCAT+AGG 0.624401 tig0023101:+3250 Msa1405060:CDS
TTACTATTTGAGGTGTGTCG+AGG 0.632858 tig0023101:-2917 None:intergenic
TTGATGAGAGTATTGCACCT+AGG 0.634165 tig0023101:+6346 Msa1405060:CDS
TAGTGGAATATCATCTGCTG+TGG 0.650542 tig0023101:+5759 Msa1405060:CDS
AGTGGAATATCATCTGCTGT+GGG 0.677617 tig0023101:+5760 Msa1405060:CDS
ATGATGTAACTCTTCACTGG+TGG 0.683679 tig0023101:-6405 None:intergenic
GGACAAAACATATCATCACA+AGG 0.713390 tig0023101:-3690 None:intergenic
TGAAATGTATGAGAACGATG+TGG 0.744665 tig0023101:-3711 None:intergenic
ATAGGAATGAATTATCAAGG+TGG 0.746997 tig0023101:+3369 Msa1405060:CDS
TGTTCATAGCATCAACAACG+AGG 0.756855 tig0023101:+3194 Msa1405060:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTTTTATTTATTTTT+TGG - tig0023101:4901-4920 None:intergenic 0.0%
!!! TTTTTTTTTGAAACAATTAA+AGG + tig0023101:4361-4380 Msa1405060:intron 10.0%
!! AAAAAGTAATAAATAGTTAA+AGG + tig0023101:4477-4496 Msa1405060:intron 10.0%
!!! AAATTTCTCATATTTATTTT+AGG + tig0023101:5658-5677 Msa1405060:intron 10.0%
!! AATGATTTGAATCAATAAAA+GGG - tig0023101:3172-3191 None:intergenic 15.0%
!! TATTATGTTTATGTTTATGT+TGG - tig0023101:3593-3612 None:intergenic 15.0%
!! CATAAACATAATAAACATAA+AGG + tig0023101:3600-3619 Msa1405060:CDS 15.0%
!! AAAATAAAACATGAAAAAGA+GGG - tig0023101:3849-3868 None:intergenic 15.0%
!! AAAAATAAAACATGAAAAAG+AGG - tig0023101:3850-3869 None:intergenic 15.0%
!!! AATTATTTGTTTTGTTTTGA+TGG + tig0023101:3902-3921 Msa1405060:intron 15.0%
!!! ATCAAAATGGTAATTTATTT+TGG - tig0023101:4091-4110 None:intergenic 15.0%
!! TTAAATATATTGAATTGAGA+TGG - tig0023101:4180-4199 None:intergenic 15.0%
!! ATCTCAATTCAATATATTTA+AGG + tig0023101:4179-4198 Msa1405060:intron 15.0%
!! TCTCAATTCAATATATTTAA+GGG + tig0023101:4180-4199 Msa1405060:intron 15.0%
!! AGAGATATATTAATATGTAT+TGG - tig0023101:4213-4232 None:intergenic 15.0%
!!! GTCAAATGTTTTTTATAAAT+AGG - tig0023101:4602-4621 None:intergenic 15.0%
!!! TTAATCTCTAAAAAACTAAA+TGG + tig0023101:5182-5201 Msa1405060:intron 15.0%
!! TTATAAATGAGAATTAATGT+TGG + tig0023101:5385-5404 Msa1405060:intron 15.0%
!!! CTTTTCAATTTAAATTTGAA+AGG - tig0023101:5546-5565 None:intergenic 15.0%
!! AAATTTAAAGACATGTATTA+AGG - tig0023101:5644-5663 None:intergenic 15.0%
!! GATATTTATAAAAACACTAT+TGG + tig0023101:6531-6550 Msa1405060:CDS 15.0%
!! TAATGAAATTGTGAATAAGA+GGG - tig0023101:2999-3018 None:intergenic 20.0%
!! GAATGATTTGAATCAATAAA+AGG - tig0023101:3173-3192 None:intergenic 20.0%
!! AAACATAATAAACATAAAGG+AGG + tig0023101:3603-3622 Msa1405060:CDS 20.0%
!! AACATAATAAACATAAAGGA+GGG + tig0023101:3604-3623 Msa1405060:CDS 20.0%
!!! ACAAAAATTAGAAGGTTTTT+AGG + tig0023101:3973-3992 Msa1405060:intron 20.0%
!! TATTGTCTTGAAAATCAAAA+TGG - tig0023101:4104-4123 None:intergenic 20.0%
!! TATATTTAACTATGCTTCTA+TGG + tig0023101:4232-4251 Msa1405060:intron 20.0%
!!! TTTTACTTTTTGCTTTTTCA+TGG + tig0023101:4265-4284 Msa1405060:intron 20.0%
!!! ATGTTTTTTATAAATAGGAC+TGG - tig0023101:4597-4616 None:intergenic 20.0%
!!! TCTTAAGTGAACATTAATTT+TGG - tig0023101:5011-5030 None:intergenic 20.0%
!! AATCAATGTGTTTGATTATA+TGG + tig0023101:5116-5135 Msa1405060:intron 20.0%
!! AATATAAGTCAATATATGTG+AGG - tig0023101:5219-5238 None:intergenic 20.0%
!! TAATTCTCATTTATAACCAA+TGG - tig0023101:5381-5400 None:intergenic 20.0%
!! ATTTAAATTTGAAAGGAGTA+AGG - tig0023101:5539-5558 None:intergenic 20.0%
!! CAAAAGTTTGATAAATGAAT+TGG + tig0023101:5584-5603 Msa1405060:intron 20.0%
!!! AATGTTTTTTCTTATTCTCA+TGG + tig0023101:6597-6616 Msa1405060:three_prime_UTR 20.0%
!!! TTTTGTGTATTTGATTGAAT+TGG + tig0023101:6632-6651 Msa1405060:three_prime_UTR 20.0%
!!! AATAACCATTTTTCATTGTA+TGG - tig0023101:6797-6816 None:intergenic 20.0%
!! TACAATGAAAAATGGTTATT+TGG + tig0023101:6797-6816 Msa1405060:three_prime_UTR 20.0%
!! ACAATGAAAAATGGTTATTT+GGG + tig0023101:6798-6817 Msa1405060:three_prime_UTR 20.0%
!! AGATTGTGTTTTACTATTTG+AGG - tig0023101:2930-2949 None:intergenic 25.0%
! GTAATGAAATTGTGAATAAG+AGG - tig0023101:3000-3019 None:intergenic 25.0%
! TATTTGTACTTGTGATTCAA+GGG - tig0023101:3025-3044 None:intergenic 25.0%
! ATATTTGTACTTGTGATTCA+AGG - tig0023101:3026-3045 None:intergenic 25.0%
! TATCTAATATGCAAATGAAG+AGG + tig0023101:3112-3131 Msa1405060:exon 25.0%
!!! ATCAAGTTGAAGCTATAAAA+GGG + tig0023101:3301-3320 Msa1405060:CDS 25.0%
! TCAAAAGGGATATATTTAGA+AGG + tig0023101:3328-3347 Msa1405060:CDS 25.0%
! CAAAAGGGATATATTTAGAA+GGG + tig0023101:3329-3348 Msa1405060:CDS 25.0%
! TATATTTAGAAGGGAAATGA+TGG + tig0023101:3338-3357 Msa1405060:CDS 25.0%
! AGAATAGGAATGAATTATCA+AGG + tig0023101:3366-3385 Msa1405060:CDS 25.0%
!! TTTGAATTTTCAATGCATTC+AGG + tig0023101:3435-3454 Msa1405060:CDS 25.0%
!! GAAATTGGTGAATATTTTGT+TGG + tig0023101:3468-3487 Msa1405060:CDS 25.0%
! TTGGTTTAAATGTATGAGAA+AGG + tig0023101:3554-3573 Msa1405060:CDS 25.0%
!!! TTTGCTAGAAAATTGTTTTG+TGG + tig0023101:3868-3887 Msa1405060:intron 25.0%
!!! TTGCTAGAAAATTGTTTTGT+GGG + tig0023101:3869-3888 Msa1405060:intron 25.0%
!! TTTTGTTGCAAGTAGATTAT+AGG + tig0023101:3937-3956 Msa1405060:intron 25.0%
!! AGTAGATTATAGGATTGTTT+TGG + tig0023101:3947-3966 Msa1405060:intron 25.0%
! TTTGGAGAACAAAAATTAGA+AGG + tig0023101:3965-3984 Msa1405060:intron 25.0%
! GAGAAAAGATGAGAAATTAA+AGG + tig0023101:4325-4344 Msa1405060:intron 25.0%
!! ACAATTAAAGGCTATCTTTT+TGG + tig0023101:4373-4392 Msa1405060:intron 25.0%
! AAAAAGAGAAGGTAAATTTG+AGG - tig0023101:4400-4419 None:intergenic 25.0%
!! AAATTTACCTTCTCTTTTTG+TGG + tig0023101:4401-4420 Msa1405060:intron 25.0%
!! AATTTACCTTCTCTTTTTGT+GGG + tig0023101:4402-4421 Msa1405060:intron 25.0%
!! TTTTTATAAATAGGACTGGA+GGG - tig0023101:4593-4612 None:intergenic 25.0%
!!! TTTTTTATAAATAGGACTGG+AGG - tig0023101:4594-4613 None:intergenic 25.0%
! CAATGCATAAATGATGAATT+TGG + tig0023101:4632-4651 Msa1405060:intron 25.0%
! ATTGTAACACATAGTCAAAA+CGG - tig0023101:4862-4881 None:intergenic 25.0%
! CCAATTGAAATTGAAATCTT+TGG - tig0023101:4960-4979 None:intergenic 25.0%
! CCAAAGATTTCAATTTCAAT+TGG + tig0023101:4957-4976 Msa1405060:intron 25.0%
! AGATTTCAATTTCAATTGGT+TGG + tig0023101:4961-4980 Msa1405060:intron 25.0%
!!! AATTGGTTGGTTTGTTTATA+AGG + tig0023101:4974-4993 Msa1405060:intron 25.0%
!! CAAACACATTGATTATTGAT+GGG - tig0023101:5110-5129 None:intergenic 25.0%
!! TCAAACACATTGATTATTGA+TGG - tig0023101:5111-5130 None:intergenic 25.0%
! CAAAATTCGCTATATTTACA+AGG - tig0023101:5159-5178 None:intergenic 25.0%
!! TCTCTAAAAAACTAAATGGA+AGG + tig0023101:5186-5205 Msa1405060:intron 25.0%
!!! TATGAGGAGTACTTTTTTAA+AGG - tig0023101:5305-5324 None:intergenic 25.0%
! AAATGAGAATTAATGTTGGT+AGG + tig0023101:5389-5408 Msa1405060:intron 25.0%
! AACCTAAGCAATAAAAAGAT+AGG + tig0023101:5811-5830 Msa1405060:CDS 25.0%
!! TTCCTATCTTTTTATTGCTT+AGG - tig0023101:5816-5835 None:intergenic 25.0%
! AAGCTTCAAAATCAAACAAT+TGG + tig0023101:5835-5854 Msa1405060:CDS 25.0%
! ACGATTAATGATCCAAATAA+TGG + tig0023101:6291-6310 Msa1405060:CDS 25.0%
! ATTAATGATCCAAATAATGG+TGG + tig0023101:6294-6313 Msa1405060:CDS 25.0%
! ATGTTAATGATTCAATGGTA+TGG + tig0023101:6757-6776 Msa1405060:three_prime_UTR 25.0%
! TGTTAATGATTCAATGGTAT+GGG + tig0023101:6758-6777 Msa1405060:three_prime_UTR 25.0%
!! GATCAAGTTGAAGCTATAAA+AGG + tig0023101:3300-3319 Msa1405060:CDS 30.0%
TATAAAAGGGTTCGTCAAAA+GGG + tig0023101:3314-3333 Msa1405060:CDS 30.0%
!! GAAATGATGGATCAAAGAAT+AGG + tig0023101:3351-3370 Msa1405060:CDS 30.0%
ATAGGAATGAATTATCAAGG+TGG + tig0023101:3369-3388 Msa1405060:CDS 30.0%
!!! TATTTTGTTGGTGTTACAGT+TGG + tig0023101:3480-3499 Msa1405060:CDS 30.0%
TGACAATCAGTCAAACTATA+AGG - tig0023101:3777-3796 None:intergenic 30.0%
AAACAAACCTGACTTCATAA+AGG - tig0023101:3818-3837 None:intergenic 30.0%
! ACAAGTGTTGCTAAATGAAT+AGG + tig0023101:4290-4309 Msa1405060:intron 30.0%
! CAAGTGTTGCTAAATGAATA+GGG + tig0023101:4291-4310 Msa1405060:intron 30.0%
AGATCACAAATTAAGACAGT+TGG + tig0023101:4431-4450 Msa1405060:intron 30.0%
GATCACAAATTAAGACAGTT+GGG + tig0023101:4432-4451 Msa1405060:intron 30.0%
ATCACAAATTAAGACAGTTG+GGG + tig0023101:4433-4452 Msa1405060:intron 30.0%
! GTCTCACATTTTACTCATTT+CGG - tig0023101:4728-4747 None:intergenic 30.0%
TAAAAACCAGCCAAAATACT+CGG + tig0023101:4780-4799 Msa1405060:intron 30.0%
AAATCTTTGGATATGTCTTG+TGG - tig0023101:4947-4966 None:intergenic 30.0%
TATCAGAACTCTAAATACGT+TGG - tig0023101:5057-5076 None:intergenic 30.0%
! AACGTATTTAGAGTTCTGAT+AGG + tig0023101:5056-5075 Msa1405060:intron 30.0%
TCTCATTTATAACCAATGGT+TGG - tig0023101:5377-5396 None:intergenic 30.0%
GAACATTAATCATAGAGTAC+TGG - tig0023101:5693-5712 None:intergenic 30.0%
AATCTTATCTTTGACAGCTA+TGG + tig0023101:5736-5755 Msa1405060:intron 30.0%
! TTCCACCAACATTTTCATAT+GGG - tig0023101:5894-5913 None:intergenic 30.0%
! ATTCCACCAACATTTTCATA+TGG - tig0023101:5895-5914 None:intergenic 30.0%
! AAACATTTTTGTGGCTCAAA+TGG - tig0023101:6002-6021 None:intergenic 30.0%
!! TCACTCAACAATTTGACTTT+TGG - tig0023101:6051-6070 None:intergenic 30.0%
! CTTCTCTATCAACCATTTTA+TGG + tig0023101:6090-6109 Msa1405060:CDS 30.0%
GTAACATTCACACCATAAAA+TGG - tig0023101:6105-6124 None:intergenic 30.0%
! TTTTATGGTGTGAATGTTAC+CGG + tig0023101:6105-6124 Msa1405060:CDS 30.0%
!!! AATCCAAGACACTTTGTTTT+TGG - tig0023101:6441-6460 None:intergenic 30.0%
GGAACACGTAATTCTATTAT+TGG + tig0023101:6474-6493 Msa1405060:CDS 30.0%
TTATGCAGCAAAATCATCTT+TGG + tig0023101:6502-6521 Msa1405060:CDS 30.0%
TATGCAGCAAAATCATCTTT+GGG + tig0023101:6503-6522 Msa1405060:CDS 30.0%
CTCTGATGTTAATGATTCAA+TGG + tig0023101:6752-6771 Msa1405060:three_prime_UTR 30.0%
TGCATCCATACAATGAAAAA+TGG + tig0023101:6789-6808 Msa1405060:three_prime_UTR 30.0%
AATAGTGAGAGAGAAGAAAG+AGG - tig0023101:2970-2989 None:intergenic 35.0%
TGAAGAGGAAATTGATGCAA+TGG + tig0023101:3127-3146 Msa1405060:CDS 35.0%
! TCATGAAGAGCATGAGAATA+TGG + tig0023101:3221-3240 Msa1405060:CDS 35.0%
! TGAGTCTAGAACTTATCCAT+AGG + tig0023101:3250-3269 Msa1405060:CDS 35.0%
GAAATCTTGAATCATGCCTA+TGG - tig0023101:3269-3288 None:intergenic 35.0%
AGGCATGATTCAAGATTTCT+TGG + tig0023101:3270-3289 Msa1405060:CDS 35.0%
GGCATGATTCAAGATTTCTT+GGG + tig0023101:3271-3290 Msa1405060:CDS 35.0%
GCATGATTCAAGATTTCTTG+GGG + tig0023101:3272-3291 Msa1405060:CDS 35.0%
CTATAAAAGGGTTCGTCAAA+AGG + tig0023101:3313-3332 Msa1405060:CDS 35.0%
ATGAATTATCAAGGTGGTCA+TGG + tig0023101:3375-3394 Msa1405060:CDS 35.0%
TCAGGAAGAGATGTTGAAAT+TGG + tig0023101:3453-3472 Msa1405060:CDS 35.0%
! ATAAGCCAAAACTTTTGTCC+TGG - tig0023101:3510-3529 None:intergenic 35.0%
!!! TTTTGGCTTATTGCTGATAC+AGG + tig0023101:3519-3538 Msa1405060:CDS 35.0%
ATACAGGAAGTGAGTTAACT+TGG + tig0023101:3535-3554 Msa1405060:CDS 35.0%
TCATACAGCAAGAAGAAGAA+GGG + tig0023101:3653-3672 Msa1405060:CDS 35.0%
GGACAAAACATATCATCACA+AGG - tig0023101:3693-3712 None:intergenic 35.0%
TGAAATGTATGAGAACGATG+TGG - tig0023101:3714-3733 None:intergenic 35.0%
!! GAAAATTGTTTTGTGGGTGT+TGG + tig0023101:3875-3894 Msa1405060:intron 35.0%
! TGTTTTACAAATGTGTCACG+TGG - tig0023101:4062-4081 None:intergenic 35.0%
ATGAGTAAAATGTGAGACAG+AGG + tig0023101:4730-4749 Msa1405060:intron 35.0%
ACAGAGGAAGTTATTAGTAG+TGG + tig0023101:4746-4765 Msa1405060:intron 35.0%
! TAGAGTTCTGATAGGAGTAA+TGG + tig0023101:5064-5083 Msa1405060:intron 35.0%
! TGTGGTAATGTATGTGTATG+AGG - tig0023101:5321-5340 None:intergenic 35.0%
TGCCTTGAATGAAGAAATGT+GGG - tig0023101:5428-5447 None:intergenic 35.0%
ATGCCTTGAATGAAGAAATG+TGG - tig0023101:5429-5448 None:intergenic 35.0%
CACAGATTTAACAAAGAGAC+TGG - tig0023101:5461-5480 None:intergenic 35.0%
TATAGTTGTCAACGTGAACA+GGG - tig0023101:5507-5526 None:intergenic 35.0%
ATATAGTTGTCAACGTGAAC+AGG - tig0023101:5508-5527 None:intergenic 35.0%
CAATCAGTGATAAATAGTCC+AGG + tig0023101:5865-5884 Msa1405060:CDS 35.0%
! ACATTTTCATATGGGAAACC+TGG - tig0023101:5886-5905 None:intergenic 35.0%
GGTTTCCCATATGAAAATGT+TGG + tig0023101:5886-5905 Msa1405060:CDS 35.0%
TTCCCATATGAAAATGTTGG+TGG + tig0023101:5889-5908 Msa1405060:CDS 35.0%
CAGCATTGTCAACAAATGAA+TGG - tig0023101:5939-5958 None:intergenic 35.0%
! CATTCATTTGTTGACAATGC+TGG + tig0023101:5937-5956 Msa1405060:CDS 35.0%
! GACAATGCTGGTCTAAAATT+TGG + tig0023101:5949-5968 Msa1405060:CDS 35.0%
CAAATGGTCAACAAGACAAT+AGG - tig0023101:5986-6005 None:intergenic 35.0%
! GGTAGCTTGAAACATTTTTG+TGG - tig0023101:6011-6030 None:intergenic 35.0%
GTTTCAAGCTACCTAACATT+TGG + tig0023101:6018-6037 Msa1405060:CDS 35.0%
TTGGAGTTGTTCCAAATGTT+AGG - tig0023101:6032-6051 None:intergenic 35.0%
TTCAAGAACAAGTGCAGTTA+AGG - tig0023101:6220-6239 None:intergenic 35.0%
!! TTTTTCAATGCCTCTACAAC+AGG - tig0023101:6252-6271 None:intergenic 35.0%
TGATCCAAATAATGGTGGTT+TGG + tig0023101:6299-6318 Msa1405060:CDS 35.0%
ACTTCCAAACCACCATTATT+TGG - tig0023101:6306-6325 None:intergenic 35.0%
CCAAAATGAAACACTAACCT+AGG - tig0023101:6366-6385 None:intergenic 35.0%
! CCTAGGTTAGTGTTTCATTT+TGG + tig0023101:6363-6382 Msa1405060:CDS 35.0%
! AGGTTAGTGTTTCATTTTGG+TGG + tig0023101:6366-6385 Msa1405060:CDS 35.0%
!! TTAGTGTTTCATTTTGGTGG+AGG + tig0023101:6369-6388 Msa1405060:CDS 35.0%
!! TTCATTTTGGTGGAGGAATA+AGG + tig0023101:6376-6395 Msa1405060:CDS 35.0%
TCAATGATGTAACTCTTCAC+TGG - tig0023101:6411-6430 None:intergenic 35.0%
! CTTGGATTTTTGCCAGTAAA+TGG + tig0023101:6453-6472 Msa1405060:CDS 35.0%
GAATTACGTGTTCCATTTAC+TGG - tig0023101:6468-6487 None:intergenic 35.0%
! TTACTATTTGAGGTGTGTCG+AGG - tig0023101:2920-2939 None:intergenic 40.0%
TGTTCATAGCATCAACAACG+AGG + tig0023101:3194-3213 Msa1405060:CDS 40.0%
! GAACACCAGGACAAAAGTTT+TGG + tig0023101:3502-3521 Msa1405060:CDS 40.0%
CTCATACAGCAAGAAGAAGA+AGG + tig0023101:3652-3671 Msa1405060:CDS 40.0%
! TCATAAAGGCATGGATCAGA+AGG - tig0023101:3804-3823 None:intergenic 40.0%
ATCCATGCCTTTATGAAGTC+AGG + tig0023101:3808-3827 Msa1405060:CDS 40.0%
AACCTGACTTCATAAAGGCA+TGG - tig0023101:3813-3832 None:intergenic 40.0%
TTACAAATGTGTCACGTGGA+TGG - tig0023101:4058-4077 None:intergenic 40.0%
! ACCTTCTCTTTTTGTGGGAA+AGG + tig0023101:4407-4426 Msa1405060:intron 40.0%
! CCTTCTCTTTTTGTGGGAAA+GGG + tig0023101:4408-4427 Msa1405060:intron 40.0%
ACAAATTAAGACAGTTGGGG+AGG + tig0023101:4436-4455 Msa1405060:intron 40.0%
! GAGACATGTTCCGAGTATTT+TGG - tig0023101:4793-4812 None:intergenic 40.0%
CAAATGTCTCATGAGCATCA+AGG - tig0023101:5273-5292 None:intergenic 40.0%
CTTGATGCTCATGAGACATT+TGG + tig0023101:5271-5290 Msa1405060:intron 40.0%
CTCATGAGACATTTGGTAAG+AGG + tig0023101:5278-5297 Msa1405060:intron 40.0%
TATAACCAATGGTTGGATGC+TGG - tig0023101:5370-5389 None:intergenic 40.0%
GTCCCACATTTCTTCATTCA+AGG + tig0023101:5423-5442 Msa1405060:intron 40.0%
TTTCTTCATTCAAGGCATGC+AGG + tig0023101:5431-5450 Msa1405060:intron 40.0%
TAAAAGGTTGGGCTAATTGC+AGG - tig0023101:5484-5503 None:intergenic 40.0%
ATCTTTGACAGCTATGGTAG+TGG + tig0023101:5742-5761 Msa1405060:intron 40.0%
TAGTGGAATATCATCTGCTG+TGG + tig0023101:5759-5778 Msa1405060:CDS 40.0%
AGTGGAATATCATCTGCTGT+GGG + tig0023101:5760-5779 Msa1405060:CDS 40.0%
!! GTTGGTGGAATATTAGCCTT+AGG + tig0023101:5904-5923 Msa1405060:CDS 40.0%
! TGAATGGTGTCTAAAGCCTA+AGG - tig0023101:5923-5942 None:intergenic 40.0%
TTTCAGCATTTGATCGTCGA+CGG - tig0023101:6136-6155 None:intergenic 40.0%
AATGCTGAAAATCCCACCAA+AGG + tig0023101:6146-6165 Msa1405060:CDS 40.0%
TGAAAATCCCACCAAAGGTT+TGG + tig0023101:6151-6170 Msa1405060:CDS 40.0%
GAAAATCCCACCAAAGGTTT+GGG + tig0023101:6152-6171 Msa1405060:CDS 40.0%
CAAAATCCCAAACCTTTGGT+GGG - tig0023101:6161-6180 None:intergenic 40.0%
TCAAAATCCCAAACCTTTGG+TGG - tig0023101:6162-6181 None:intergenic 40.0%
GCTTCAAAATCCCAAACCTT+TGG - tig0023101:6165-6184 None:intergenic 40.0%
!!! AAGGTTTGGGATTTTGAAGC+TGG + tig0023101:6165-6184 Msa1405060:CDS 40.0%
AGCCTATTATCCTGTTGTAG+AGG + tig0023101:6239-6258 Msa1405060:CDS 40.0%
TGCCTCTACAACAGGATAAT+AGG - tig0023101:6244-6263 None:intergenic 40.0%
! GAAGTTTGCTTTGATGCAGA+AGG + tig0023101:6321-6340 Msa1405060:CDS 40.0%
!! TTGATGAGAGTATTGCACCT+AGG + tig0023101:6346-6365 Msa1405060:CDS 40.0%
ATGATGTAACTCTTCACTGG+TGG - tig0023101:6408-6427 None:intergenic 40.0%
! GCACCAAAAACAAAGTGTCT+TGG + tig0023101:6435-6454 Msa1405060:CDS 40.0%
AGAACAACTCTCTAGTTGCA+TGG - tig0023101:6570-6589 None:intergenic 40.0%
AATGTGTCACGTGGATGGAA+AGG - tig0023101:4053-4072 None:intergenic 45.0%
CCCTTTCCCACAAAAAGAGA+AGG - tig0023101:4411-4430 None:intergenic 45.0%
!!! CATGTTCCGAGTATTTTGGC+TGG - tig0023101:4789-4808 None:intergenic 45.0%
GAGCAGACCATTGTCTAGTA+CGG + tig0023101:5031-5050 Msa1405060:intron 45.0%
! GTTGCTGGGTCATCTTTTTG+TGG - tig0023101:5339-5358 None:intergenic 45.0%
TGCTGGAAAGAATGGTTGCT+GGG - tig0023101:5353-5372 None:intergenic 45.0%
ATGCTGGAAAGAATGGTTGC+TGG - tig0023101:5354-5373 None:intergenic 45.0%
TGGTTGGATGCTGGAAAGAA+TGG - tig0023101:5361-5380 None:intergenic 45.0%
TCTTTCCAGCATCCAACCAT+TGG + tig0023101:5362-5381 Msa1405060:intron 45.0%
CGTGAACAGGGTAAAAGGTT+GGG - tig0023101:5495-5514 None:intergenic 45.0%
ACGTGAACAGGGTAAAAGGT+TGG - tig0023101:5496-5515 None:intergenic 45.0%
GTCAACGTGAACAGGGTAAA+AGG - tig0023101:5500-5519 None:intergenic 45.0%
TCATCTGCTGTGGGATTCTA+TGG + tig0023101:5769-5788 Msa1405060:CDS 45.0%
!!! TGGGATTTTGAAGCTGGTGA+AGG + tig0023101:6171-6190 Msa1405060:CDS 45.0%
!!! GGGATTTTGAAGCTGGTGAA+GGG + tig0023101:6172-6191 Msa1405060:CDS 45.0%
!! GAAGGGATGATCATTGACTC+AGG + tig0023101:6189-6208 Msa1405060:CDS 45.0%
ACTCTCTAGTTGCATGGAGA+AGG - tig0023101:6564-6583 None:intergenic 45.0%
! GGTGTTACAGTTGGAACACC+AGG + tig0023101:3489-3508 Msa1405060:CDS 50.0%
TGTCACGTGGATGGAAAGGA+TGG - tig0023101:4049-4068 None:intergenic 50.0%
! CTGGAGGGAGTAAGTGGTTT+TGG - tig0023101:4578-4597 None:intergenic 50.0%
ATAGGACTGGAGGGAGTAAG+TGG - tig0023101:4584-4603 None:intergenic 50.0%
ACGTTGGCCGTACTAGACAA+TGG - tig0023101:5041-5060 None:intergenic 50.0%
TTGATCGTCGACGGAGATGC+CGG - tig0023101:6127-6146 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
tig0023101 gene 2917 6821 2917 ID=Msa1405060;Name=Msa1405060
tig0023101 mRNA 2917 6821 2917 ID=Msa1405060-mRNA-1;Parent=Msa1405060;Name=Msa1405060-mRNA-1;_AED=0.00;_eAED=0.00;_QI=203|1|1|1|1|1|2|243|511
tig0023101 exon 2917 3829 2917 ID=Msa1405060-mRNA-1:exon:23918;Parent=Msa1405060-mRNA-1
tig0023101 exon 5753 6821 5753 ID=Msa1405060-mRNA-1:exon:23919;Parent=Msa1405060-mRNA-1
tig0023101 five_prime_UTR 2917 3119 2917 ID=Msa1405060-mRNA-1:five_prime_utr;Parent=Msa1405060-mRNA-1
tig0023101 CDS 3120 3829 3120 ID=Msa1405060-mRNA-1:cds;Parent=Msa1405060-mRNA-1
tig0023101 CDS 5753 6578 5753 ID=Msa1405060-mRNA-1:cds;Parent=Msa1405060-mRNA-1
tig0023101 three_prime_UTR 6579 6821 6579 ID=Msa1405060-mRNA-1:three_prime_utr;Parent=Msa1405060-mRNA-1
Gene Sequence

>Msa1405060

ATGCAAATGAAGAGGAAATTGATGCAATGGAGTACACAAATTCTCATGACCCTTTTATTGATTCAAATCATTCATGTTCATAGCATCAACAACGAGGAAGATCATGAAGAGCATGAGAATATGGAGAAGATGAGTCTAGAACTTATCCATAGGCATGATTCAAGATTTCTTGGGGAGATAGATCAAGTTGAAGCTATAAAAGGGTTCGTCAAAAGGGATATATTTAGAAGGGAAATGATGGATCAAAGAATAGGAATGAATTATCAAGGTGGTCATGGTAATAATAGAAGAAAAGACATTGAAATGAAACAAGATTTTGAATTTTCAATGCATTCAGGAAGAGATGTTGAAATTGGTGAATATTTTGTTGGTGTTACAGTTGGAACACCAGGACAAAAGTTTTGGCTTATTGCTGATACAGGAAGTGAGTTAACTTGGTTTAAATGTATGAGAAAGGTTCATCATAATCACCAACATAAACATAAACATAATAAACATAAAGGAGGGTCAAAGACAAAATCAAGAACAAAATCTCATACAGCAAGAAGAAGAAGGGCTCATTCTCATAATCCTTGTGATGATATGTTTTGTCCACATCGTTCTCATACATTTCATCAAATTTCTTGTTCATCTAAAATGTGCATTGCTGAACTTCCTTATAGTTTGACTGATTGTCAAAGTCCTTCTGATCCATGCCTTTATGAAGTCAGCTATGGTAGTGGAATATCATCTGCTGTGGGATTCTATGGCACTGACACAATATCAATAAACCTAAGCAATAAAAAGATAGGAAAGCTTCAAAATCAAACAATTGGATGCACACAATCAGTGATAAATAGTCCAGGTTTCCCATATGAAAATGTTGGTGGAATATTAGCCTTAGGCTTTAGACACCATTCATTTGTTGACAATGCTGGTCTAAAATTTGGTTCAAAATTTTCCTATTGTCTTGTTGACCATTTGAGCCACAAAAATGTTTCAAGCTACCTAACATTTGGAACAACTCCAAAAGTCAAATTGTTGAGTGAAATCAAAAGAACAGACATGCTTCTCTATCAACCATTTTATGGTGTGAATGTTACCGGCATCTCCGTCGACGATCAAATGCTGAAAATCCCACCAAAGGTTTGGGATTTTGAAGCTGGTGAAGGGATGATCATTGACTCAGGTTTTACCTTAACTGCACTTGTTCTTGAAGCCTATTATCCTGTTGTAGAGGCATTGAAAAAATCTTTGCACAATGTGAAAACGATTAATGATCCAAATAATGGTGGTTTGGAAGTTTGCTTTGATGCAGAAGGTTTTGATGAGAGTATTGCACCTAGGTTAGTGTTTCATTTTGGTGGAGGAATAAGGTTTGAACCACCAGTGAAGAGTTACATCATTGATGCTGCACCAAAAACAAAGTGTCTTGGATTTTTGCCAGTAAATGGAACACGTAATTCTATTATTGGTAATATTATGCAGCAAAATCATCTTTGGGAATTTGATATTTATAAAAACACTATTGGTTTTGCTCCTTCTCCATGCAACTAG
Protein sequence

>Msa1405060

MQMKRKLMQWSTQILMTLLLIQIIHVHSINNEEDHEEHENMEKMSLELIHRHDSRFLGEIDQVEAIKGFVKRDIFRREMMDQRIGMNYQGGHGNNRRKDIEMKQDFEFSMHSGRDVEIGEYFVGVTVGTPGQKFWLIADTGSELTWFKCMRKVHHNHQHKHKHNKHKGGSKTKSRTKSHTARRRRAHSHNPCDDMFCPHRSHTFHQISCSSKMCIAELPYSLTDCQSPSDPCLYEVSYGSGISSAVGFYGTDTISINLSNKKIGKLQNQTIGCTQSVINSPGFPYENVGGILALGFRHHSFVDNAGLKFGSKFSYCLVDHLSHKNVSSYLTFGTTPKVKLLSEIKRTDMLLYQPFYGVNVTGISVDDQMLKIPPKVWDFEAGEGMIIDSGFTLTALVLEAYYPVVEALKKSLHNVKTINDPNNGGLEVCFDAEGFDESIAPRLVFHFGGGIRFEPPVKSYIIDAAPKTKCLGFLPVNGTRNSIIGNIMQQNHLWEFDIYKNTIGFAPSPCN*