Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1425120 | XP_003590416.1 | 90.860 | 558 | 19 | 4 | 52 | 577 | 101 | 658 | 0.0 | 1020 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1425120 | sp|F4I2J8|CATIN_ARATH | 61.228 | 619 | 153 | 9 | 42 | 577 | 102 | 716 | 0.0 | 714 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1425120 | G7IA50 | 90.860 | 558 | 19 | 4 | 52 | 577 | 101 | 658 | 0.0 | 1020 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0072720 | Msa1425120 | 0.846910 | 1.613455e-59 | -8.615850e-47 |
Msa0120280 | Msa1425120 | 0.835910 | 1.274070e-56 | -8.615850e-47 |
Msa1414820 | Msa1425120 | 0.828361 | 9.381967e-55 | -8.615850e-47 |
Msa1420120 | Msa1425120 | 0.865664 | 5.012534e-65 | -8.615850e-47 |
Msa0758540 | Msa1425120 | 0.804787 | 1.826972e-49 | -8.615850e-47 |
Msa0163510 | Msa1425120 | 0.804292 | 2.317196e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1425120 | MtrunA17_Chr1g0179691 | 90.860 | 558 | 19 | 4 | 52 | 577 | 101 | 658 | 0.0 | 1020 |
Msa1425120 | MtrunA17_Chr7g0265361 | 77.661 | 573 | 88 | 6 | 42 | 577 | 79 | 648 | 0.0 | 884 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1425120 | AT1G03910.1 | 70.053 | 571 | 136 | 4 | 42 | 577 | 102 | 672 | 0.0 | 801 |
Msa1425120 | AT1G03910.2 | 61.228 | 619 | 153 | 9 | 42 | 577 | 102 | 716 | 0.0 | 714 |
Msa1425120 | AT2G36815.2 | 52.041 | 98 | 33 | 2 | 202 | 298 | 17 | 101 | 4.45e-21 | 88.6 |
Msa1425120 | AT2G36815.1 | 53.125 | 96 | 31 | 2 | 203 | 297 | 24 | 106 | 6.03e-21 | 88.6 |
Find 142 sgRNAs with CRISPR-Local
Find 539 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAATGCTTGCGTAACATTT+TGG | 0.170202 | tig0025825:+17599 | None:intergenic |
TTCTTGACCCTCTGCTTTAA+TGG | 0.192895 | tig0025825:+17349 | Msa1425110:three_prime_UTR |
TGCAATACAGGCTTGTTTAA+AGG | 0.200086 | tig0025825:-17631 | Msa1425120:intron |
TGTTGTTATATCAAATAAAA+TGG | 0.231224 | tig0025825:-21198 | Msa1425120:intron |
CCCTCTGCTTTAATGGGTTC+GGG | 0.271684 | tig0025825:+17356 | Msa1425110:three_prime_UTR |
ACCCTCTGCTTTAATGGGTT+CGG | 0.272032 | tig0025825:+17355 | Msa1425110:three_prime_UTR |
ATCAGAGGGTGAAGATAAAT+TGG | 0.274595 | tig0025825:-17559 | Msa1425120:CDS |
CGCCAACCCATGTAGAATAT+TGG | 0.284425 | tig0025825:-19983 | Msa1425120:CDS |
GTTGAAATACTTTGGTTTCC+TGG | 0.284593 | tig0025825:+16094 | Msa1425110:three_prime_UTR |
AATAGCTCCCATAGCCTTCA+TGG | 0.287973 | tig0025825:+17034 | Msa1425110:three_prime_UTR |
TGCAGAATTGGAAGCTTTGC+AGG | 0.295132 | tig0025825:-17837 | Msa1425120:CDS |
TCTTGACCCTCTGCTTTAAT+GGG | 0.310995 | tig0025825:+17350 | Msa1425110:three_prime_UTR |
CACTCCTTCTGGTGAGTGAT+TGG | 0.313594 | tig0025825:-18006 | Msa1425120:CDS |
ATGCTATTTGTAGGTTTGTT+TGG | 0.327045 | tig0025825:-21923 | Msa1425120:intron |
TGTGTCTTGTCTACAAGGTC+TGG | 0.329849 | tig0025825:+15966 | Msa1425110:three_prime_UTR |
ACGTGCTCGAGCTGAGTTCC+AGG | 0.339829 | tig0025825:-21270 | Msa1425120:CDS |
CTTCATGCAGGCACTCCTTC+TGG | 0.341193 | tig0025825:-18017 | Msa1425120:intron |
TTAACTGAAAATTCATCAAT+AGG | 0.343796 | tig0025825:+21864 | None:intergenic |
GACTTACTTCTCATTAAGAT+TGG | 0.354150 | tig0025825:+22559 | None:intergenic |
TCATCACCATGAAACAGTTC+TGG | 0.358787 | tig0025825:+17293 | Msa1425110:three_prime_UTR |
TTATACCCTTGTACAACCTT+TGG | 0.359525 | tig0025825:+16005 | Msa1425110:three_prime_UTR |
AGAGCAGCAGAGACGAATTC+AGG | 0.361317 | tig0025825:-17108 | Msa1425120:CDS |
CACCCTCTGATGGTTTCTTA+AGG | 0.361872 | tig0025825:+17571 | None:intergenic |
TATTTCAACCGTGTTCATAC+TGG | 0.366794 | tig0025825:-16080 | Msa1425120:CDS |
CTGATGATAGTAGTAGTGAT+AGG | 0.370578 | tig0025825:-22991 | Msa1425120:CDS |
AAAGTGATCTCTTTGCATAT+TGG | 0.373779 | tig0025825:+17381 | None:intergenic |
TGCAAAAGCTTCTTCACATC+TGG | 0.376117 | tig0025825:+17872 | None:intergenic |
CTCTGGTGCAGAAGTAAATC+TGG | 0.379600 | tig0025825:-16988 | Msa1425120:CDS |
CAGCAAAGCTTGTTGAGTAC+TGG | 0.391117 | tig0025825:-17784 | Msa1425120:CDS |
GAAGAAGGAGATGTAATGTT+TGG | 0.391656 | tig0025825:-17011 | Msa1425120:CDS |
TGATGATATCAAAATGCATT+TGG | 0.392676 | tig0025825:-20021 | Msa1425120:CDS |
GGGGAAGACACATGCAGAAT+TGG | 0.400110 | tig0025825:-17849 | Msa1425120:CDS |
TCCGCATTGTAAACAAAGAA+TGG | 0.405433 | tig0025825:-15776 | Msa1425120:CDS |
TTGAAGGCTCATACTGTGTC+TGG | 0.405951 | tig0025825:-22614 | Msa1425120:CDS |
GAGCTTGTGTCTTGTCTACA+AGG | 0.410873 | tig0025825:+15961 | Msa1425110:three_prime_UTR |
GCCAACCCATGTAGAATATT+GGG | 0.412226 | tig0025825:-19982 | Msa1425120:CDS |
AAATGCATTTGGACTTTGAC+AGG | 0.412773 | tig0025825:-20010 | Msa1425120:CDS |
ACTCCTTCTGGTGAGTGATT+GGG | 0.418323 | tig0025825:-18005 | Msa1425120:CDS |
TACCCTTGTACAACCTTTGG+AGG | 0.431571 | tig0025825:+16008 | Msa1425110:three_prime_UTR |
TCAAATGACTCGAATCCATT+TGG | 0.433737 | tig0025825:-22587 | Msa1425120:CDS |
TGGAGGTATGGCTGCTTGAA+TGG | 0.436425 | tig0025825:-21229 | Msa1425120:CDS |
ATGAAACAGTTCTGGTGAAA+AGG | 0.440946 | tig0025825:+17301 | Msa1425110:three_prime_UTR |
AAATGTTGGCGCAGGTCTAT+TGG | 0.444124 | tig0025825:-16136 | Msa1425120:intron |
AGTAGAGCTCTGTCCTCTTC+AGG | 0.445180 | tig0025825:+17251 | Msa1425110:intron |
GAAAGTTGCTAAGAAATTGA+AGG | 0.448557 | tig0025825:-22630 | Msa1425120:CDS |
TGAAGAGGACAGAGCTCTAC+TGG | 0.451227 | tig0025825:-17249 | Msa1425120:intron |
TTGAAATACTTTGGTTTCCT+GGG | 0.453521 | tig0025825:+16095 | Msa1425110:three_prime_UTR |
TGAACACGGTTGAAATACTT+TGG | 0.455750 | tig0025825:+16086 | Msa1425110:three_prime_UTR |
AGCACGACATGAGGAAGAAA+TGG | 0.455954 | tig0025825:-21485 | Msa1425120:intron |
GAAATCTGAGGAGGATATTG+AGG | 0.461280 | tig0025825:-17520 | Msa1425120:CDS |
TGTTCAGCAAGCACCTCGGC+TGG | 0.461619 | tig0025825:+17920 | None:intergenic |
TTATTTGATATAACAACAAA+TGG | 0.461759 | tig0025825:+21203 | None:intergenic |
GTGTCTTGTCTACAAGGTCT+GGG | 0.462415 | tig0025825:+15967 | Msa1425110:three_prime_UTR |
CCGCATTGTAAACAAAGAAT+GGG | 0.467266 | tig0025825:-15775 | Msa1425120:CDS |
AAAGAGACAGAGAGAAAGGA+TGG | 0.468118 | tig0025825:-21832 | Msa1425120:intron |
TGGGAATATTCTCACAAGAA+AGG | 0.469421 | tig0025825:-15756 | Msa1425120:CDS |
GAGACGGAGCCGACATGAAT+CGG | 0.472964 | tig0025825:-23032 | Msa1425120:CDS |
AATTTATCTTCACCCTCTGA+TGG | 0.482921 | tig0025825:+17561 | None:intergenic |
CACTATGGTGACCACTCCTC+CGG | 0.484550 | tig0025825:+23071 | None:intergenic |
ATTGGTGGCATGACAAATAC+AGG | 0.484625 | tig0025825:-16118 | Msa1425120:CDS |
AAATTATCTTCAGATGGAGC+AGG | 0.490796 | tig0025825:+17068 | Msa1425110:three_prime_UTR |
ATTGAGCGTGATGTTGTTCA+AGG | 0.501715 | tig0025825:-21891 | Msa1425120:CDS |
ATCTCAAAATTATCTTCAGA+TGG | 0.502531 | tig0025825:+17062 | Msa1425110:three_prime_UTR |
CCTTGTACAACCTTTGGAGG+TGG | 0.503514 | tig0025825:+16011 | Msa1425110:three_prime_UTR |
CCACCTCCAAAGGTTGTACA+AGG | 0.506231 | tig0025825:-16011 | Msa1425120:CDS |
TTAAGATTGGAATCACCAAA+TGG | 0.507057 | tig0025825:+22572 | None:intergenic |
TCCTTCTCAATAGTGTAAGT+TGG | 0.508185 | tig0025825:+15939 | Msa1425110:three_prime_UTR |
GATGAAAGCCATGAAGGCTA+TGG | 0.508933 | tig0025825:-17042 | Msa1425120:CDS |
AGCAAAGCTTGTTGAGTACT+GGG | 0.510191 | tig0025825:-17783 | Msa1425120:CDS |
GGTGAAGTAGAAGATGAGGC+TGG | 0.513288 | tig0025825:-17326 | Msa1425120:CDS |
GGGTTTGACAGTGAACGAAA+TGG | 0.515774 | tig0025825:-20054 | Msa1425120:CDS |
AAGATGCAATTGATCGAGCT+AGG | 0.518701 | tig0025825:-17961 | Msa1425120:CDS |
TCGAGCTGAGTTCCAGGACT+GGG | 0.522136 | tig0025825:-21264 | Msa1425120:CDS |
CCAGAAATTATCTGCGGTAG+CGG | 0.525395 | tig0025825:+15676 | Msa1425110:three_prime_UTR |
GGCATGACAAATACAGGCCC+AGG | 0.525776 | tig0025825:-16112 | Msa1425120:CDS |
CTCGAGCTGAGTTCCAGGAC+TGG | 0.526610 | tig0025825:-21265 | Msa1425120:CDS |
AATGCAGGCGGAAATTGAAA+AGG | 0.529839 | tig0025825:-21542 | Msa1425120:intron |
CCGATGATTCCGATAGAATC+CGG | 0.534725 | tig0025825:-23090 | Msa1425120:CDS |
ACCACTCCTCCGGATTCTAT+CGG | 0.536244 | tig0025825:+23081 | None:intergenic |
AGAAGTAAATCTGGATTCAC+AGG | 0.541558 | tig0025825:-16979 | Msa1425120:intron |
TCTGTGACCGCCGATCACTA+TGG | 0.542891 | tig0025825:+23056 | None:intergenic |
CTTCGTATGGTGGCCCTGCA+TGG | 0.548737 | tig0025825:+15883 | Msa1425110:three_prime_UTR |
TGATGATAGTAGTAGTGATA+GGG | 0.552104 | tig0025825:-22990 | Msa1425120:CDS |
ATACCTCCCAATATTCTACA+TGG | 0.559393 | tig0025825:+19976 | None:intergenic |
TCCCAATATTCTACATGGGT+TGG | 0.568443 | tig0025825:+19981 | None:intergenic |
CCGGATTCTATCGGAATCAT+CGG | 0.570818 | tig0025825:+23090 | None:intergenic |
GCTATGGGAGCTATTGAAGA+AGG | 0.572049 | tig0025825:-17026 | Msa1425120:CDS |
ATGAAAGCCATGAAGGCTAT+GGG | 0.576335 | tig0025825:-17041 | Msa1425120:CDS |
ATTAAAGCAGAGGGTCAAGA+AGG | 0.580470 | tig0025825:-17347 | Msa1425120:CDS |
AGACTTACAATGTCTTCGTA+TGG | 0.580822 | tig0025825:+15870 | Msa1425110:intron |
ATTGAGAAGGATGGCAGCAA+TGG | 0.582219 | tig0025825:-15927 | Msa1425120:CDS |
TCAGCAAGCACCTCGGCTGG+AGG | 0.583261 | tig0025825:+17923 | None:intergenic |
GAAATTATCTGCGGTAGCGG+TGG | 0.585724 | tig0025825:+15679 | Msa1425110:three_prime_UTR |
AGAAGGTGAAGTAGAAGATG+AGG | 0.586312 | tig0025825:-17330 | Msa1425120:CDS |
CCCGAACCCATTAAAGCAGA+GGG | 0.588808 | tig0025825:-17356 | Msa1425120:CDS |
ATTGAGTCAGAAATGCGTAC+TGG | 0.589102 | tig0025825:-17809 | Msa1425120:CDS |
CCCATTCTTTGTTTACAATG+CGG | 0.589870 | tig0025825:+15775 | Msa1425110:three_prime_UTR |
TCCGATAGAATCCGGAGGAG+TGG | 0.590097 | tig0025825:-23082 | Msa1425120:CDS |
GGAGATGTAATGTTTGGCTC+TGG | 0.590473 | tig0025825:-17005 | Msa1425120:CDS |
TTACCTTGGCTTTATATATG+CGG | 0.592230 | tig0025825:+17741 | None:intergenic |
ATCGGCGGTCACAGAGGAGA+CGG | 0.593716 | tig0025825:-23048 | Msa1425120:CDS |
TCCCGAACCCATTAAAGCAG+AGG | 0.593821 | tig0025825:-17357 | Msa1425120:CDS |
TGCATCATAAGATTCCATGC+AGG | 0.594356 | tig0025825:-15897 | Msa1425120:CDS |
ATTGATCGAGCTAGGGTGCG+TGG | 0.595446 | tig0025825:-17953 | Msa1425120:CDS |
ATATTCTACATGGGTTGGCG+TGG | 0.603561 | tig0025825:+19986 | None:intergenic |
GCATCATAAGATTCCATGCA+GGG | 0.604220 | tig0025825:-15896 | Msa1425120:CDS |
GATAGTAGTAGTGATAGGGA+TGG | 0.605108 | tig0025825:-22986 | Msa1425120:intron |
TGTTGGCGCAGGTCTATTGG+TGG | 0.605871 | tig0025825:-16133 | Msa1425120:intron |
CTTACAATGTCTTCGTATGG+TGG | 0.608002 | tig0025825:+15873 | Msa1425110:intron |
AGATGCAATTGATCGAGCTA+GGG | 0.609364 | tig0025825:-17960 | Msa1425120:CDS |
ACTTACACTATTGAGAAGGA+TGG | 0.610559 | tig0025825:-15936 | Msa1425120:CDS |
GTTTCATGGTGATGAAAATG+AGG | 0.610771 | tig0025825:-17285 | Msa1425120:CDS |
TGGAGAAGAACCTCCAGCCG+AGG | 0.612324 | tig0025825:-17933 | Msa1425120:CDS |
TCATGACAATCCACCTCCAA+AGG | 0.613499 | tig0025825:-16021 | Msa1425120:CDS |
GAGACGAATTCAGGAAGCAA+TGG | 0.614187 | tig0025825:-17099 | Msa1425120:CDS |
CCTTGGCTTTATATATGCGG+AGG | 0.616946 | tig0025825:+17744 | None:intergenic |
GTGAAGTAGAAGATGAGGCT+GGG | 0.617278 | tig0025825:-17325 | Msa1425120:CDS |
TCCAACTTACACTATTGAGA+AGG | 0.618655 | tig0025825:-15940 | Msa1425120:CDS |
ACTCCCAATCACTCACCAGA+AGG | 0.619083 | tig0025825:+18002 | None:intergenic |
CGCCTTAAGAAACCATCAGA+GGG | 0.619195 | tig0025825:-17573 | Msa1425120:CDS |
CCTCCGCATATATAAAGCCA+AGG | 0.624228 | tig0025825:-17744 | Msa1425120:intron |
AATGCATTTGGACTTTGACA+GGG | 0.628278 | tig0025825:-20009 | Msa1425120:CDS |
GGAGTGGTCACCATAGTGAT+CGG | 0.640226 | tig0025825:-23066 | Msa1425120:CDS |
ACTTGAGAAAGCACGACATG+AGG | 0.644679 | tig0025825:-21494 | Msa1425120:CDS |
GGAAGCTATTGATCCTGAAG+AGG | 0.658125 | tig0025825:-17264 | Msa1425120:CDS |
TGCTCATGTTATGAAATCTG+AGG | 0.658528 | tig0025825:-17532 | Msa1425120:CDS |
TTTAAGTGCACATTTGAACG+TGG | 0.660103 | tig0025825:-15732 | Msa1425120:CDS |
TACCTCCCAATATTCTACAT+GGG | 0.662886 | tig0025825:+19977 | None:intergenic |
GAGCCGACATGAATCGGACT+CGG | 0.665866 | tig0025825:-23026 | Msa1425120:CDS |
TCATGTTATGAAATCTGAGG+AGG | 0.666704 | tig0025825:-17529 | Msa1425120:CDS |
GTGTTCATACTGGATATGAG+TGG | 0.672306 | tig0025825:-16070 | Msa1425120:CDS |
TATCCGAGTCCGATTCATGT+CGG | 0.677662 | tig0025825:+23023 | None:intergenic |
ATAGTGATCGGCGGTCACAG+AGG | 0.679327 | tig0025825:-23054 | Msa1425120:CDS |
AACCCATGTAGAATATTGGG+AGG | 0.679555 | tig0025825:-19979 | Msa1425120:intron |
ACGCCTTAAGAAACCATCAG+AGG | 0.683028 | tig0025825:-17574 | Msa1425120:CDS |
CACCTCCAAAGGTTGTACAA+GGG | 0.704703 | tig0025825:-16010 | Msa1425120:CDS |
GTGGTCACCATAGTGATCGG+CGG | 0.706810 | tig0025825:-23063 | Msa1425120:CDS |
ACTCATATCCAGTATGAACA+CGG | 0.712518 | tig0025825:+16072 | Msa1425110:three_prime_UTR |
ATGATTCCGATAGAATCCGG+AGG | 0.713791 | tig0025825:-23087 | Msa1425120:CDS |
GAGGTGCTTGCTGAACAGAG+AGG | 0.735663 | tig0025825:-17914 | Msa1425120:CDS |
TCTCTGTTCAGCAAGCACCT+CGG | 0.736566 | tig0025825:+17916 | None:intergenic |
AGAGTGCCAGAAATTATCTG+CGG | 0.744813 | tig0025825:+15670 | Msa1425110:three_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTTTTTTTAATGATC+TGG | - | tig0025825:16018-16037 | Msa1425120:CDS | 10.0% |
!! | TATATGTGTAAATATAAATA+TGG | - | tig0025825:16438-16457 | Msa1425120:intron | 10.0% |
!!! | ATAATTAATTTTTTATGACA+TGG | + | tig0025825:17881-17900 | None:intergenic | 10.0% |
!!! | ATTAAATAAATCATAGTTTT+CGG | + | tig0025825:18458-18477 | None:intergenic | 10.0% |
!! | ATTAAAACTAAATGATTAAA+AGG | + | tig0025825:19486-19505 | None:intergenic | 10.0% |
!!! | AAATAGTTTTTTCAATTTAA+TGG | + | tig0025825:19554-19573 | None:intergenic | 10.0% |
!! | TAATGTTAATTATTATTAGA+TGG | - | tig0025825:21894-21913 | Msa1425120:CDS | 10.0% |
!! | TTAAGAAAAAAAAATTAGTT+AGG | - | tig0025825:22398-22417 | Msa1425120:intron | 10.0% |
!! | ATCTGAAAATTATATTTCTT+CGG | + | tig0025825:16303-16322 | Msa1425110:intron | 15.0% |
!!! | TATAATTTTCAGATATGTAT+TGG | - | tig0025825:16309-16328 | Msa1425120:intron | 15.0% |
!! | AAGAAAAACAAGTTAATTAT+TGG | - | tig0025825:16469-16488 | Msa1425120:intron | 15.0% |
!!! | ATTATGATTTTACAACATTT+TGG | - | tig0025825:17025-17044 | Msa1425120:CDS | 15.0% |
!! | TTATTTGATATAACAACAAA+TGG | + | tig0025825:17570-17589 | None:intergenic | 15.0% |
!! | TGTTGTTATATCAAATAAAA+TGG | - | tig0025825:17572-17591 | Msa1425120:CDS | 15.0% |
!! | TATATCAAATAAAATGGTAT+TGG | - | tig0025825:17578-17597 | Msa1425120:CDS | 15.0% |
!!! | GTTAAAAAGTATTAGATAAA+AGG | + | tig0025825:18013-18032 | None:intergenic | 15.0% |
!!! | ATAATTTGTTCATACAATAT+TGG | - | tig0025825:18089-18108 | Msa1425120:intron | 15.0% |
!!! | TAATTTGTTCATACAATATT+GGG | - | tig0025825:18090-18109 | Msa1425120:intron | 15.0% |
!! | GATTTATTTAATAAATGACA+TGG | - | tig0025825:18466-18485 | Msa1425120:intron | 15.0% |
!! | TTATAATTTACAACAGTTAA+AGG | + | tig0025825:18574-18593 | None:intergenic | 15.0% |
!! | ACATAATGATTTGATATTTA+TGG | - | tig0025825:18689-18708 | Msa1425120:intron | 15.0% |
!! | ATACTTCAATAGTAAAATTA+TGG | - | tig0025825:18849-18868 | Msa1425120:intron | 15.0% |
!!! | AATTTTAAATACTTTGTATG+AGG | + | tig0025825:19589-19608 | None:intergenic | 15.0% |
!!! | TCATACAAAGTATTTAAAAT+TGG | - | tig0025825:19588-19607 | Msa1425120:intron | 15.0% |
!! | AAGTCAAGAAAATAAATAAA+TGG | - | tig0025825:19982-20001 | Msa1425120:CDS | 15.0% |
!!! | ATTTGTAAAATATTGACTTT+TGG | - | tig0025825:21312-21331 | Msa1425120:intron | 15.0% |
!!! | TCATGTATATTGTTATTTTA+GGG | - | tig0025825:22557-22576 | Msa1425120:intron | 15.0% |
!! | AATACATGAAATAAGTAATT+TGG | + | tig0025825:22964-22983 | None:intergenic | 15.0% |
!!! | TTTTTTTTTTAATGATCTGG+AGG | - | tig0025825:16021-16040 | Msa1425120:CDS | 20.0% |
!!! | ATGAATTGAATTGGTTTAAA+GGG | - | tig0025825:16073-16092 | Msa1425120:CDS | 20.0% |
!! | TCTGAAAATTATATTTCTTC+GGG | + | tig0025825:16302-16321 | Msa1425110:intron | 20.0% |
!!! | TCAAAGAAACTTTATTTTTG+TGG | - | tig0025825:16369-16388 | Msa1425120:intron | 20.0% |
!!! | AGGTTATTCAATTTTTTTCT+TGG | + | tig0025825:16551-16570 | Msa1425110:intron | 20.0% |
!! | AGAAAAAAATTGAATAACCT+TGG | - | tig0025825:16551-16570 | Msa1425120:intron | 20.0% |
!! | TAAAACAGCAAAAAATGAAA+AGG | + | tig0025825:16691-16710 | Msa1425110:intron | 20.0% |
!! | TTAACTGAAAATTCATCAAT+AGG | + | tig0025825:16909-16928 | Msa1425110:intron | 20.0% |
!!! | TTTTCTCCAAAAAATGTTTT+TGG | - | tig0025825:16968-16987 | Msa1425120:intron | 20.0% |
!!! | TAACATCCAAAAACATTTTT+TGG | + | tig0025825:16977-16996 | Msa1425110:intron | 20.0% |
!!! | AAAAAATGTTTTTGGATGTT+AGG | - | tig0025825:16976-16995 | Msa1425120:intron | 20.0% |
!!! | AAAAATGTTTTTGGATGTTA+GGG | - | tig0025825:16977-16996 | Msa1425120:intron | 20.0% |
!! | TTAACAAGAAATTAGTCAAA+TGG | + | tig0025825:17202-17221 | Msa1425110:intron | 20.0% |
!! | TCTTGTTAAAATTATAATGC+AGG | - | tig0025825:17213-17232 | Msa1425120:intron | 20.0% |
!! | CCAATAATAAGTTATAAGAA+TGG | + | tig0025825:17320-17339 | Msa1425110:three_prime_UTR | 20.0% |
!! | CCATTCTTATAACTTATTAT+TGG | - | tig0025825:17317-17336 | Msa1425120:CDS | 20.0% |
!! | GTTCTTTATTCTCATAATAT+TGG | + | tig0025825:17799-17818 | None:intergenic | 20.0% |
!! | GCAAAATTATGAAATTAGAT+TGG | - | tig0025825:18488-18507 | Msa1425120:intron | 20.0% |
!! | TATATATTGTTGTATACTCT+TGG | - | tig0025825:18914-18933 | Msa1425120:intron | 20.0% |
!!! | TTTTTCTTTGTTGAATAAAC+CGG | + | tig0025825:19231-19250 | None:intergenic | 20.0% |
!!! | AGTTTTGAATTTAAACACTT+TGG | - | tig0025825:19441-19460 | Msa1425120:intron | 20.0% |
!!! | GTTTTGAATTTAAACACTTT+GGG | - | tig0025825:19442-19461 | Msa1425120:intron | 20.0% |
!!! | ATTCCTTTTTTTATTTGATG+CGG | - | tig0025825:19629-19648 | Msa1425120:intron | 20.0% |
!!! | GATTTTCATTGATTTTGAAA+AGG | - | tig0025825:19704-19723 | Msa1425120:intron | 20.0% |
!! | AACTGATAAATCTTTAGTTA+CGG | + | tig0025825:19853-19872 | None:intergenic | 20.0% |
!! | AAAGATTTATCAGTTTATCT+TGG | - | tig0025825:19858-19877 | Msa1425120:intron | 20.0% |
!! | GGTTCATCATAAAAAATAAT+GGG | - | tig0025825:20161-20180 | Msa1425120:intron | 20.0% |
!! | GTTCATCATAAAAAATAATG+GGG | - | tig0025825:20162-20181 | Msa1425120:intron | 20.0% |
!! | TTTGTTTCAGTTAACTTATA+TGG | - | tig0025825:20535-20554 | Msa1425120:intron | 20.0% |
!! | TAACATTAAAACTAGAATCA+TGG | + | tig0025825:21882-21901 | None:intergenic | 20.0% |
!!! | ATTTTGGAGTACTATTATAA+AGG | - | tig0025825:22437-22456 | Msa1425120:intron | 20.0% |
!!! | AAAACTTTCAGATTTTAAGT+CGG | + | tig0025825:22476-22495 | None:intergenic | 20.0% |
!!! | CTCATGTATATTGTTATTTT+AGG | - | tig0025825:22556-22575 | Msa1425120:intron | 20.0% |
!!! | TAATTTTGATATACTGTCGA+TGG | - | tig0025825:15912-15931 | Msa1425120:CDS | 25.0% |
!! | TGGAAAAGTTTTTACATTGT+CGG | - | tig0025825:15932-15951 | Msa1425120:CDS | 25.0% |
!! | TGTGTTTTCATGAATTGAAT+TGG | - | tig0025825:16064-16083 | Msa1425120:CDS | 25.0% |
!! | CATGAATTGAATTGGTTTAA+AGG | - | tig0025825:16072-16091 | Msa1425120:CDS | 25.0% |
! | TTTGATGTTGAATTGTTCTT+TGG | - | tig0025825:16100-16119 | Msa1425120:CDS | 25.0% |
! | CACAAGACAGAAAAAAATTA+GGG | + | tig0025825:16247-16266 | Msa1425110:intron | 25.0% |
! | ACACAAGACAGAAAAAAATT+AGG | + | tig0025825:16248-16267 | Msa1425110:intron | 25.0% |
!!! | AAACTTTATTTTTGTGGAGA+GGG | - | tig0025825:16375-16394 | Msa1425120:intron | 25.0% |
! | GTTGCTGAATAAGTTTATTT+CGG | - | tig0025825:16514-16533 | Msa1425120:intron | 25.0% |
!!! | AAGCTTTTAGTTTTTTCGTT+TGG | - | tig0025825:16616-16635 | Msa1425120:intron | 25.0% |
!!! | TTTTAGTTTTTTCGTTTGGA+GGG | - | tig0025825:16620-16639 | Msa1425120:intron | 25.0% |
!!! | ACATTGTTATTTTCTAGAAG+CGG | - | tig0025825:16741-16760 | Msa1425120:intron | 25.0% |
! | AAATTAGTCAAATGGTAGAT+GGG | + | tig0025825:17194-17213 | Msa1425110:intron | 25.0% |
! | TGTTAAAATTATAATGCAGG+CGG | - | tig0025825:17216-17235 | Msa1425120:intron | 25.0% |
! | AAAAAATAGTTTATGCACCA+AGG | + | tig0025825:17430-17449 | None:intergenic | 25.0% |
!!! | ATTTTGATCAAAGCAAGTTT+AGG | - | tig0025825:17637-17656 | Msa1425120:intron | 25.0% |
! | AGAAATAAATGAACCATACA+TGG | - | tig0025825:17743-17762 | Msa1425120:intron | 25.0% |
! | TTAGATAAAAGGATATTGCA+TGG | + | tig0025825:18002-18021 | None:intergenic | 25.0% |
! | AAATTAGAAACTCATGCAAA+AGG | + | tig0025825:18066-18085 | None:intergenic | 25.0% |
! | GAAAAGAAACATGAGTTTAA+AGG | + | tig0025825:18552-18571 | None:intergenic | 25.0% |
! | ATTTAGTCATGCTAATGAAA+GGG | + | tig0025825:18632-18651 | None:intergenic | 25.0% |
! | TATTTAGTCATGCTAATGAA+AGG | + | tig0025825:18633-18652 | None:intergenic | 25.0% |
!!! | CTAGTTTTAAACGTCAATAT+TGG | - | tig0025825:18656-18675 | Msa1425120:intron | 25.0% |
!!! | AATGCATTTTGATATCATCA+CGG | + | tig0025825:18749-18768 | None:intergenic | 25.0% |
! | TGATGATATCAAAATGCATT+TGG | - | tig0025825:18749-18768 | Msa1425120:intron | 25.0% |
! | GAAATTGTCTAAAGATTAAG+AGG | - | tig0025825:18871-18890 | Msa1425120:intron | 25.0% |
! | ACTATAGATTAGAGCAAATA+AGG | + | tig0025825:19003-19022 | None:intergenic | 25.0% |
!! | ATACAGTGGTTTTCTTTAAA+AGG | - | tig0025825:19728-19747 | Msa1425120:intron | 25.0% |
! | ACTGATAAATCTTTAGTTAC+GGG | + | tig0025825:19852-19871 | None:intergenic | 25.0% |
!!! | TATCAGTTTATCTTGGTTTT+AGG | - | tig0025825:19865-19884 | Msa1425120:intron | 25.0% |
! | TTACCTCAAATATCATGATT+TGG | - | tig0025825:20130-20149 | Msa1425120:intron | 25.0% |
! | TACCTCAAATATCATGATTT+GGG | - | tig0025825:20131-20150 | Msa1425120:intron | 25.0% |
!!! | TATTTTTTATGATGAACCCA+AGG | + | tig0025825:20159-20178 | None:intergenic | 25.0% |
! | GGGTTCATCATAAAAAATAA+TGG | - | tig0025825:20160-20179 | Msa1425120:intron | 25.0% |
!! | ATAAAAAATAATGGGGAGAT+AGG | - | tig0025825:20169-20188 | Msa1425120:intron | 25.0% |
!! | TAAAAAATAATGGGGAGATA+GGG | - | tig0025825:20170-20189 | Msa1425120:intron | 25.0% |
! | TAAACAGCAAATAAGAAGTA+TGG | - | tig0025825:20346-20365 | Msa1425120:intron | 25.0% |
! | AAGAAGACAACTAATTCATT+GGG | + | tig0025825:20502-20521 | None:intergenic | 25.0% |
! | TAAGAAGACAACTAATTCAT+TGG | + | tig0025825:20503-20522 | None:intergenic | 25.0% |
! | TAAGTTAACTGAAACAAAAG+AGG | + | tig0025825:20533-20552 | None:intergenic | 25.0% |
! | GTCATTTCATAATTCATGTT+CGG | - | tig0025825:20706-20725 | Msa1425120:intron | 25.0% |
!!! | CAAAATGAAGTTTTGGATAT+AGG | + | tig0025825:21344-21363 | None:intergenic | 25.0% |
!! | GGAAAATCAAAATGAAGTTT+TGG | + | tig0025825:21351-21370 | None:intergenic | 25.0% |
! | TGAGTTTGTGTTAAGTATAT+GGG | - | tig0025825:21584-21603 | Msa1425120:intron | 25.0% |
! | ATCTCAAAATTATCTTCAGA+TGG | + | tig0025825:21711-21730 | None:intergenic | 25.0% |
!! | ATTTGTATGATTTTCACACT+TGG | - | tig0025825:21828-21847 | Msa1425120:intron | 25.0% |
!! | ATTTTCACACTTGGTAAAAT+GGG | - | tig0025825:21837-21856 | Msa1425120:CDS | 25.0% |
! | GTTCTATCAAAAACCATATT+TGG | - | tig0025825:22009-22028 | Msa1425120:intron | 25.0% |
! | AACCATTAGAAAAGATTTAG+AGG | + | tig0025825:22049-22068 | None:intergenic | 25.0% |
! | CTTATGTAAGTGATAAATGT+TGG | - | tig0025825:22620-22639 | Msa1425120:CDS | 25.0% |
! | ACTTATTTCATGTATTTGAC+AGG | - | tig0025825:22968-22987 | Msa1425120:intron | 25.0% |
TGATGATAGTAGTAGTGATA+GGG | - | tig0025825:15780-15799 | Msa1425120:CDS | 30.0% | |
GAAAGTTGCTAAGAAATTGA+AGG | - | tig0025825:16140-16159 | Msa1425120:intron | 30.0% | |
TTAAGATTGGAATCACCAAA+TGG | + | tig0025825:16201-16220 | Msa1425110:intron | 30.0% | |
GACTTACTTCTCATTAAGAT+TGG | + | tig0025825:16214-16233 | Msa1425110:intron | 30.0% | |
AAAAAATTAGGGAGAAGAGA+GGG | + | tig0025825:16236-16255 | Msa1425110:intron | 30.0% | |
AAAAAAATTAGGGAGAAGAG+AGG | + | tig0025825:16237-16256 | Msa1425110:intron | 30.0% | |
!!! | GAAACTTTATTTTTGTGGAG+AGG | - | tig0025825:16374-16393 | Msa1425120:intron | 30.0% |
AATGATTAATACTCGTTCCA+AGG | + | tig0025825:16571-16590 | Msa1425110:intron | 30.0% | |
ATCATTGAAGTTCATGATGT+TGG | - | tig0025825:16585-16604 | Msa1425120:intron | 30.0% | |
!!! | CTTTTAGTTTTTTCGTTTGG+AGG | - | tig0025825:16619-16638 | Msa1425120:intron | 30.0% |
CAATAAATTTGCAAGCTTAG+CGG | + | tig0025825:16721-16740 | Msa1425110:intron | 30.0% | |
GTTCGTAAATAAGATGATGA+AGG | + | tig0025825:16827-16846 | Msa1425110:intron | 30.0% | |
! | TTTACGAACATGCTATTTGT+AGG | - | tig0025825:16838-16857 | Msa1425120:intron | 30.0% |
! | ATGCTATTTGTAGGTTTGTT+TGG | - | tig0025825:16847-16866 | Msa1425120:intron | 30.0% |
ATCATCATAATCAATAACCC+GGG | + | tig0025825:17146-17165 | Msa1425110:intron | 30.0% | |
CATCATCATAATCAATAACC+CGG | + | tig0025825:17147-17166 | Msa1425110:intron | 30.0% | |
GAAATTAGTCAAATGGTAGA+TGG | + | tig0025825:17195-17214 | Msa1425110:intron | 30.0% | |
GATCATAAAAGAATATAGCC+AGG | + | tig0025825:17390-17409 | None:intergenic | 30.0% | |
TTATACAAATTGTCTCTCAC+AGG | - | tig0025825:17461-17480 | Msa1425120:intron | 30.0% | |
TGTTTGGTAAGGATATCAAT+TGG | + | tig0025825:17696-17715 | None:intergenic | 30.0% | |
TGGTCTTCAAGGTTAATATT+TGG | - | tig0025825:17763-17782 | Msa1425120:CDS | 30.0% | |
GCTAAAAGATGCAATTTGAT+TGG | + | tig0025825:17859-17878 | None:intergenic | 30.0% | |
TCTGAGTAGAAAAGTTGAAA+TGG | + | tig0025825:17923-17942 | None:intergenic | 30.0% | |
CTTTCTATCTTTAACTCACT+CGG | + | tig0025825:18385-18404 | None:intergenic | 30.0% | |
!! | GTTTTAAACGTCAATATTGG+TGG | - | tig0025825:18659-18678 | Msa1425120:intron | 30.0% |
TGATTTGATATTTATGGTGC+AGG | - | tig0025825:18695-18714 | Msa1425120:intron | 30.0% | |
GATTTGATATTTATGGTGCA+GGG | - | tig0025825:18696-18715 | Msa1425120:intron | 30.0% | |
TGTTGTATACTCTTGGAATT+TGG | - | tig0025825:18921-18940 | Msa1425120:intron | 30.0% | |
GTTGTATACTCTTGGAATTT+GGG | - | tig0025825:18922-18941 | Msa1425120:intron | 30.0% | |
! | TAATCTATAGTTGATGTCTC+AGG | - | tig0025825:19012-19031 | Msa1425120:intron | 30.0% |
ACATGGTATAACTAAGATTG+AGG | - | tig0025825:19123-19142 | Msa1425120:intron | 30.0% | |
!! | TAGATCACAGGTTTGTTATT+GGG | + | tig0025825:19149-19168 | None:intergenic | 30.0% |
! | CTAAAGCTCTAATTCTAAGA+TGG | + | tig0025825:19187-19206 | None:intergenic | 30.0% |
CATCTTAGAATTAGAGCTTT+AGG | - | tig0025825:19185-19204 | Msa1425120:intron | 30.0% | |
AAAGAAAAACCTCACAAAAC+TGG | - | tig0025825:19242-19261 | Msa1425120:intron | 30.0% | |
ATGCATAGATGATATTGTAC+TGG | + | tig0025825:19522-19541 | None:intergenic | 30.0% | |
ACACCGCATCAAATAAAAAA+AGG | + | tig0025825:19635-19654 | None:intergenic | 30.0% | |
GAAGACTAATGTAGTGATAT+TGG | - | tig0025825:19658-19677 | Msa1425120:intron | 30.0% | |
GTGATATTGGAGAAATCAAA+AGG | - | tig0025825:19671-19690 | Msa1425120:intron | 30.0% | |
TTAATGCTACGAAACCATAT+GGG | - | tig0025825:19811-19830 | Msa1425120:intron | 30.0% | |
! | TAAGCAAAAAGCATGAACAA+TGG | + | tig0025825:19942-19961 | None:intergenic | 30.0% |
!! | CATGCTTTTTGCTTATGATT+TGG | - | tig0025825:19947-19966 | Msa1425120:intron | 30.0% |
!! | TTTGCTTATGATTTGGTCAT+TGG | - | tig0025825:19954-19973 | Msa1425120:intron | 30.0% |
ATACAAACCATGGAAATGTA+TGG | - | tig0025825:20021-20040 | Msa1425120:CDS | 30.0% | |
CTTAAAACCATACATTTCCA+TGG | + | tig0025825:20031-20050 | None:intergenic | 30.0% | |
TACCCAAATCATGATATTTG+AGG | + | tig0025825:20136-20155 | None:intergenic | 30.0% | |
TTAACTTATATGGCCATTGT+GGG | - | tig0025825:20545-20564 | Msa1425120:intron | 30.0% | |
! | TATCCGGTCTCAAATATTTT+AGG | - | tig0025825:20584-20603 | Msa1425120:intron | 30.0% |
! | GAACCTAAAATATTTGAGAC+CGG | + | tig0025825:20590-20609 | None:intergenic | 30.0% |
!! | TTACCTTGGCTTTATATATG+CGG | + | tig0025825:21032-21051 | None:intergenic | 30.0% |
TAATGTTAGAGAGATTACCT+TGG | + | tig0025825:21046-21065 | None:intergenic | 30.0% | |
TGTTACATGCCATAACTTAA+TGG | - | tig0025825:21095-21114 | Msa1425120:intron | 30.0% | |
AAAGTGATCTCTTTGCATAT+TGG | + | tig0025825:21392-21411 | None:intergenic | 30.0% | |
GTGAGTTTGTGTTAAGTATA+TGG | - | tig0025825:21583-21602 | Msa1425120:intron | 30.0% | |
! | GATTTTCACACTTGGTAAAA+TGG | - | tig0025825:21836-21855 | Msa1425120:CDS | 30.0% |
! | TGGTTTTTGATAGAACACTA+TGG | + | tig0025825:22005-22024 | None:intergenic | 30.0% |
! | GACCTCTAAATCTTTTCTAA+TGG | - | tig0025825:22044-22063 | Msa1425120:intron | 30.0% |
! | TTTTCTAATGGTTTCTCGAA+TGG | - | tig0025825:22056-22075 | Msa1425120:intron | 30.0% |
TGTAAGAAGAGTAGATCAAA+TGG | + | tig0025825:22124-22143 | None:intergenic | 30.0% | |
TTGATCTACTCTTCTTACAA+CGG | - | tig0025825:22125-22144 | Msa1425120:intron | 30.0% | |
GAAAATAAGCTTAGATGGTT+TGG | + | tig0025825:22177-22196 | None:intergenic | 30.0% | |
TGGTAGAAAATAAGCTTAGA+TGG | + | tig0025825:22182-22201 | None:intergenic | 30.0% | |
! | TCTACCAACTTTTCTACTAT+AGG | - | tig0025825:22195-22214 | Msa1425120:intron | 30.0% |
! | TATTTTCCATGTAGTATGAC+TGG | + | tig0025825:22373-22392 | None:intergenic | 30.0% |
! | AGTACAAAGTTCAGAGATTT+TGG | - | tig0025825:22421-22440 | Msa1425120:intron | 30.0% |
! | TTGGAGTACTATTATAAAGG+AGG | - | tig0025825:22440-22459 | Msa1425120:intron | 30.0% |
AGTACTATTATAAAGGAGGT+GGG | - | tig0025825:22444-22463 | Msa1425120:intron | 30.0% | |
! | TTGAAATACTTTGGTTTCCT+GGG | + | tig0025825:22678-22697 | None:intergenic | 30.0% |
TGTAAGTCTATTGTTCATGA+TGG | - | tig0025825:22914-22933 | Msa1425120:intron | 30.0% | |
CTGATGATAGTAGTAGTGAT+AGG | - | tig0025825:15779-15798 | Msa1425120:CDS | 35.0% | |
! | CTCTTCAGTAATTTTCCTTG+AGG | + | tig0025825:15824-15843 | Msa1425110:intron | 35.0% |
CTCAAGGAAAATTACTGAAG+AGG | - | tig0025825:15822-15841 | Msa1425120:intron | 35.0% | |
AGAGGAAATAGCTCAGTATT+TGG | - | tig0025825:15840-15859 | Msa1425120:intron | 35.0% | |
!!! | TGTTCTTTGGTTTTGTGTTC+AGG | - | tig0025825:16113-16132 | Msa1425120:CDS | 35.0% |
TCAAATGACTCGAATCCATT+TGG | - | tig0025825:16183-16202 | Msa1425120:intron | 35.0% | |
TTATTCAGCAACCAGCAATA+GGG | + | tig0025825:16506-16525 | Msa1425110:intron | 35.0% | |
GCTGAATAAGTTTATTTCGG+TGG | - | tig0025825:16517-16536 | Msa1425120:intron | 35.0% | |
AGAAAAAGAGACAGAGAGAA+AGG | - | tig0025825:16934-16953 | Msa1425120:intron | 35.0% | |
!! | ACAAAACAACTAGTTGGTAG+TGG | + | tig0025825:17065-17084 | Msa1425110:three_prime_UTR | 35.0% |
!! | CTACCAACTAGTTGTTTTGT+TGG | - | tig0025825:17065-17084 | Msa1425120:CDS | 35.0% |
ATGCCAACAAAACAACTAGT+TGG | + | tig0025825:17071-17090 | Msa1425110:three_prime_UTR | 35.0% | |
TCATCATAATCAATAACCCG+GGG | + | tig0025825:17145-17164 | Msa1425110:intron | 35.0% | |
TGAAAAAACGAAGAGAAGAG+AGG | - | tig0025825:17251-17270 | Msa1425120:CDS | 35.0% | |
GAAAAAACGAAGAGAAGAGA+GGG | - | tig0025825:17252-17271 | Msa1425120:CDS | 35.0% | |
TAGAAGCGAAATTACGTTCT+GGG | - | tig0025825:17355-17374 | Msa1425120:CDS | 35.0% | |
TAGTTTATGCACCAAGGTTT+GGG | + | tig0025825:17424-17443 | None:intergenic | 35.0% | |
ATAGTTTATGCACCAAGGTT+TGG | + | tig0025825:17425-17444 | None:intergenic | 35.0% | |
AAAAAAGAGAAGTGGAGGTA+TGG | - | tig0025825:17529-17548 | Msa1425120:CDS | 35.0% | |
! | TCTGAAATTAGATTGCGTGA+AGG | - | tig0025825:17660-17679 | Msa1425120:intron | 35.0% |
ATCCTTACCAAACATCTTGA+TGG | - | tig0025825:17702-17721 | Msa1425120:intron | 35.0% | |
TTAACCTTGAAGACCATGTA+TGG | + | tig0025825:17759-17778 | None:intergenic | 35.0% | |
!! | TTGGATGACACTCTAAAGTT+AGG | + | tig0025825:17840-17859 | None:intergenic | 35.0% |
! | CAACTTTTCTACTCAGATCA+TGG | - | tig0025825:17926-17945 | Msa1425120:CDS | 35.0% |
!!! | GTGAATGCATCTACTTTTTC+TGG | - | tig0025825:18112-18131 | Msa1425120:intron | 35.0% |
TTCATGGTTGTTGATGTTAG+AGG | + | tig0025825:18152-18171 | None:intergenic | 35.0% | |
TCTAACATCAACAACCATGA+AGG | - | tig0025825:18151-18170 | Msa1425120:intron | 35.0% | |
TTGGAAAGCAGTGAAGAAAA+CGG | + | tig0025825:18349-18368 | None:intergenic | 35.0% | |
! | TCAATCTGGTTTGTATAGAG+AGG | - | tig0025825:18421-18440 | Msa1425120:intron | 35.0% |
! | CAATCTGGTTTGTATAGAGA+GGG | - | tig0025825:18422-18441 | Msa1425120:intron | 35.0% |
! | AATCTGGTTTGTATAGAGAG+GGG | - | tig0025825:18423-18442 | Msa1425120:intron | 35.0% |
AAATGCATTTGGACTTTGAC+AGG | - | tig0025825:18760-18779 | Msa1425120:intron | 35.0% | |
AATGCATTTGGACTTTGACA+GGG | - | tig0025825:18761-18780 | Msa1425120:intron | 35.0% | |
TACCTCCCAATATTCTACAT+GGG | + | tig0025825:18796-18815 | None:intergenic | 35.0% | |
ATACCTCCCAATATTCTACA+TGG | + | tig0025825:18797-18816 | None:intergenic | 35.0% | |
ACTAAACAAGCCATGGAAAA+AGG | + | tig0025825:18823-18842 | None:intergenic | 35.0% | |
TGATGTAACTAAACAAGCCA+TGG | + | tig0025825:18830-18849 | None:intergenic | 35.0% | |
!!! | TGGTTTTGTAGGGTTGAATT+AGG | + | tig0025825:18955-18974 | None:intergenic | 35.0% |
!!! | CCTTAGAAGTTGGTTTTGTA+GGG | + | tig0025825:18965-18984 | None:intergenic | 35.0% |
!!! | ACCTTAGAAGTTGGTTTTGT+AGG | + | tig0025825:18966-18985 | None:intergenic | 35.0% |
ATCTAATACGTGGAGTAATG+TGG | - | tig0025825:19042-19061 | Msa1425120:intron | 35.0% | |
TCTAATACGTGGAGTAATGT+GGG | - | tig0025825:19043-19062 | Msa1425120:intron | 35.0% | |
!! | CTAGATCACAGGTTTGTTAT+TGG | + | tig0025825:19150-19169 | None:intergenic | 35.0% |
CAATAACAAACCTGTGATCT+AGG | - | tig0025825:19148-19167 | Msa1425120:intron | 35.0% | |
! | AAACACTTTGGGAATAGCAT+TGG | - | tig0025825:19453-19472 | Msa1425120:intron | 35.0% |
!! | GATTTTGAAAAGGCATACAG+TGG | - | tig0025825:19714-19733 | Msa1425120:intron | 35.0% |
!! | AGTACTCTGAGATATATGTG+AGG | - | tig0025825:19779-19798 | Msa1425120:intron | 35.0% |
!! | GTACTCTGAGATATATGTGA+GGG | - | tig0025825:19780-19799 | Msa1425120:intron | 35.0% |
!! | TACTCTGAGATATATGTGAG+GGG | - | tig0025825:19781-19800 | Msa1425120:intron | 35.0% |
GTTAATGCTACGAAACCATA+TGG | - | tig0025825:19810-19829 | Msa1425120:intron | 35.0% | |
TAATGCTACGAAACCATATG+GGG | - | tig0025825:19812-19831 | Msa1425120:intron | 35.0% | |
! | AAATCTTTTGTAGCCCCATA+TGG | + | tig0025825:19828-19847 | None:intergenic | 35.0% |
AACCAGGATAAAACGATAAG+CGG | + | tig0025825:19898-19917 | None:intergenic | 35.0% | |
AGAGACATGAATACAAACCA+TGG | - | tig0025825:20011-20030 | Msa1425120:CDS | 35.0% | |
CAAAGATCAGAGACAGAAAT+TGG | - | tig0025825:20097-20116 | Msa1425120:intron | 35.0% | |
! | ATATCATGATTTGGGTACCT+TGG | - | tig0025825:20139-20158 | Msa1425120:intron | 35.0% |
! | TATCATGATTTGGGTACCTT+GGG | - | tig0025825:20140-20159 | Msa1425120:intron | 35.0% |
GTAAACTGTAGGATACAACT+AGG | - | tig0025825:20197-20216 | Msa1425120:intron | 35.0% | |
ACATTCAACCCTATATAGCA+TGG | + | tig0025825:20319-20338 | None:intergenic | 35.0% | |
TGCTATATAGGGTTGAATGT+TGG | - | tig0025825:20319-20338 | Msa1425120:intron | 35.0% | |
GCTATATAGGGTTGAATGTT+GGG | - | tig0025825:20320-20339 | Msa1425120:intron | 35.0% | |
! | AAGAAGTATGGTCAATGTTG+TGG | - | tig0025825:20358-20377 | Msa1425120:intron | 35.0% |
GTTAACTTATATGGCCATTG+TGG | - | tig0025825:20544-20563 | Msa1425120:intron | 35.0% | |
TTGCTTCCTTAACATGTATC+CGG | - | tig0025825:20568-20587 | Msa1425120:intron | 35.0% | |
GCGAACAATCCATTAAGTTA+TGG | + | tig0025825:21107-21126 | None:intergenic | 35.0% | |
! | TCCATTATTTGCTGCAATAC+AGG | - | tig0025825:21127-21146 | Msa1425120:intron | 35.0% |
! | TGCAATACAGGCTTGTTTAA+AGG | - | tig0025825:21139-21158 | Msa1425120:intron | 35.0% |
! | CAAATGCTTGCGTAACATTT+TGG | + | tig0025825:21174-21193 | None:intergenic | 35.0% |
AATTTATCTTCACCCTCTGA+TGG | + | tig0025825:21212-21231 | None:intergenic | 35.0% | |
ATCAGAGGGTGAAGATAAAT+TGG | - | tig0025825:21211-21230 | Msa1425120:CDS | 35.0% | |
TGCTCATGTTATGAAATCTG+AGG | - | tig0025825:21238-21257 | Msa1425120:CDS | 35.0% | |
TCATGTTATGAAATCTGAGG+AGG | - | tig0025825:21241-21260 | Msa1425120:CDS | 35.0% | |
TGGACTGCACAAAAAATATC+AGG | + | tig0025825:21372-21391 | None:intergenic | 35.0% | |
! | ATGAAACAGTTCTGGTGAAA+AGG | + | tig0025825:21472-21491 | None:intergenic | 35.0% |
! | TTTTCACCAGAACTGTTTCA+TGG | - | tig0025825:21471-21490 | Msa1425120:intron | 35.0% |
! | GTTTCATGGTGATGAAAATG+AGG | - | tig0025825:21485-21504 | Msa1425120:intron | 35.0% |
AAATTATCTTCAGATGGAGC+AGG | + | tig0025825:21705-21724 | None:intergenic | 35.0% | |
!!! | TTTTGAGATGAAAGCCATGA+AGG | - | tig0025825:21722-21741 | Msa1425120:intron | 35.0% |
GAAGAAGGAGATGTAATGTT+TGG | - | tig0025825:21759-21778 | Msa1425120:intron | 35.0% | |
AGAAGTAAATCTGGATTCAC+AGG | - | tig0025825:21791-21810 | Msa1425120:intron | 35.0% | |
! | CAATGAGTTGGATCCAAATA+TGG | + | tig0025825:22025-22044 | None:intergenic | 35.0% |
AGATTTAGAGGTCAATGAGT+TGG | + | tig0025825:22037-22056 | None:intergenic | 35.0% | |
! | GTTTCTCGAATGGTTTTCTT+AGG | - | tig0025825:22066-22085 | Msa1425120:intron | 35.0% |
AAGAAGAGTAGATCAAATGG+AGG | + | tig0025825:22121-22140 | None:intergenic | 35.0% | |
AGCACCTATAGTAGAAAAGT+TGG | + | tig0025825:22202-22221 | None:intergenic | 35.0% | |
AGACTAGACAAGATAGGATT+AGG | + | tig0025825:22254-22273 | None:intergenic | 35.0% | |
ACTGGCAATGTTGTATGATA+CGG | + | tig0025825:22355-22374 | None:intergenic | 35.0% | |
GAGTACTATTATAAAGGAGG+TGG | - | tig0025825:22443-22462 | Msa1425120:intron | 35.0% | |
GTACTATTATAAAGGAGGTG+GGG | - | tig0025825:22445-22464 | Msa1425120:intron | 35.0% | |
TACTATTATAAAGGAGGTGG+GGG | - | tig0025825:22446-22465 | Msa1425120:intron | 35.0% | |
! | GTTGAAATACTTTGGTTTCC+TGG | + | tig0025825:22679-22698 | None:intergenic | 35.0% |
TGAACACGGTTGAAATACTT+TGG | + | tig0025825:22687-22706 | None:intergenic | 35.0% | |
TATTTCAACCGTGTTCATAC+TGG | - | tig0025825:22690-22709 | Msa1425120:intron | 35.0% | |
ACTCATATCCAGTATGAACA+CGG | + | tig0025825:22701-22720 | None:intergenic | 35.0% | |
TTATACCCTTGTACAACCTT+TGG | + | tig0025825:22768-22787 | None:intergenic | 35.0% | |
TCCAACTTACACTATTGAGA+AGG | - | tig0025825:22830-22849 | Msa1425120:intron | 35.0% | |
TCCTTCTCAATAGTGTAAGT+TGG | + | tig0025825:22834-22853 | None:intergenic | 35.0% | |
ACTTACACTATTGAGAAGGA+TGG | - | tig0025825:22834-22853 | Msa1425120:intron | 35.0% | |
AGACTTACAATGTCTTCGTA+TGG | + | tig0025825:22903-22922 | None:intergenic | 35.0% | |
TCCGCATTGTAAACAAAGAA+TGG | - | tig0025825:22994-23013 | Msa1425120:CDS | 35.0% | |
! | CCCATTCTTTGTTTACAATG+CGG | + | tig0025825:22998-23017 | None:intergenic | 35.0% |
CCGCATTGTAAACAAAGAAT+GGG | - | tig0025825:22995-23014 | Msa1425120:CDS | 35.0% | |
TGGGAATATTCTCACAAGAA+AGG | - | tig0025825:23014-23033 | Msa1425120:CDS | 35.0% | |
TTTAAGTGCACATTTGAACG+TGG | - | tig0025825:23038-23057 | Msa1425120:CDS | 35.0% | |
GATAGTAGTAGTGATAGGGA+TGG | - | tig0025825:15784-15803 | Msa1425120:intron | 40.0% | |
AGCTCAGTATTTGGCGAAAA+AGG | - | tig0025825:15849-15868 | Msa1425120:intron | 40.0% | |
ATGCATGCATACTGCATATG+AGG | + | tig0025825:16337-16356 | Msa1425110:intron | 40.0% | |
!! | TATTTTTGTGGAGAGGGTAG+TGG | - | tig0025825:16381-16400 | Msa1425120:intron | 40.0% |
CTTATTCAGCAACCAGCAAT+AGG | + | tig0025825:16507-16526 | Msa1425110:intron | 40.0% | |
!!! | TAGTTTTTTCGTTTGGAGGG+TGG | - | tig0025825:16623-16642 | Msa1425120:intron | 40.0% |
!!! | AGTTTTTTCGTTTGGAGGGT+GGG | - | tig0025825:16624-16643 | Msa1425120:intron | 40.0% |
ATTGAGCGTGATGTTGTTCA+AGG | - | tig0025825:16879-16898 | Msa1425120:intron | 40.0% | |
AAAGAGACAGAGAGAAAGGA+TGG | - | tig0025825:16938-16957 | Msa1425120:intron | 40.0% | |
!! | AGTTGTTTTGTTGGCATGAC+TGG | - | tig0025825:17074-17093 | Msa1425120:CDS | 40.0% |
CATCATAATCAATAACCCGG+GGG | + | tig0025825:17144-17163 | Msa1425110:intron | 40.0% | |
AATGCAGGCGGAAATTGAAA+AGG | - | tig0025825:17228-17247 | Msa1425120:intron | 40.0% | |
CTAGAAGCGAAATTACGTTC+TGG | - | tig0025825:17354-17373 | Msa1425120:CDS | 40.0% | |
AAAGAATATAGCCAGGCAGA+TGG | + | tig0025825:17383-17402 | None:intergenic | 40.0% | |
GGTAAGGATATCAATTGGCT+TGG | + | tig0025825:17691-17710 | None:intergenic | 40.0% | |
AGCCATCAAGATGTTTGGTA+AGG | + | tig0025825:17707-17726 | None:intergenic | 40.0% | |
ATCAGAGCCATCAAGATGTT+TGG | + | tig0025825:17712-17731 | None:intergenic | 40.0% | |
!! | TCTTGATGGCTCTGATGATT+TGG | - | tig0025825:17716-17735 | Msa1425120:intron | 40.0% |
TGAACCATACATGGTCTTCA+AGG | - | tig0025825:17752-17771 | Msa1425120:CDS | 40.0% | |
AGGATATTGCATGGAGAAGA+TGG | + | tig0025825:17993-18012 | None:intergenic | 40.0% | |
AGTGACAGAAATTGTGGTCA+TGG | + | tig0025825:18247-18266 | None:intergenic | 40.0% | |
TGGAAAGCAGTGAAGAAAAC+GGG | + | tig0025825:18348-18367 | None:intergenic | 40.0% | |
AGATAGAAAGTTGCAGCAGA+TGG | - | tig0025825:18395-18414 | Msa1425120:intron | 40.0% | |
! | ATCTGGTTTGTATAGAGAGG+GGG | - | tig0025825:18424-18443 | Msa1425120:intron | 40.0% |
GCCAACCCATGTAGAATATT+GGG | - | tig0025825:18788-18807 | Msa1425120:intron | 40.0% | |
TCCCAATATTCTACATGGGT+TGG | + | tig0025825:18792-18811 | None:intergenic | 40.0% | |
AACCCATGTAGAATATTGGG+AGG | - | tig0025825:18791-18810 | Msa1425120:intron | 40.0% | |
!! | GAGGTATCTTCCTTTTTCCA+TGG | - | tig0025825:18810-18829 | Msa1425120:intron | 40.0% |
CCCTACAAAACCAACTTCTA+AGG | - | tig0025825:18962-18981 | Msa1425120:intron | 40.0% | |
!! | CAAAACCAACTTCTAAGGTG+AGG | - | tig0025825:18967-18986 | Msa1425120:intron | 40.0% |
! | TCTATAGTTGATGTCTCAGG+TGG | - | tig0025825:19015-19034 | Msa1425120:intron | 40.0% |
! | CTATAGTTGATGTCTCAGGT+GGG | - | tig0025825:19016-19035 | Msa1425120:intron | 40.0% |
AGTAATGTGGGTGGAATACA+TGG | - | tig0025825:19055-19074 | Msa1425120:intron | 40.0% | |
ATAGCGTGAACATTTGCACA+TGG | - | tig0025825:19106-19125 | Msa1425120:intron | 40.0% | |
AACAAACCTGTGATCTAGGA+TGG | - | tig0025825:19152-19171 | Msa1425120:intron | 40.0% | |
!! | TTGAATAAACCGGTTTTGCG+AGG | + | tig0025825:19221-19240 | None:intergenic | 40.0% |
!! | AAAACTGGCTTGTAAGGTGA+GGG | - | tig0025825:19257-19276 | Msa1425120:intron | 40.0% |
ACTAGAGACTAGTGCTTACA+AGG | + | tig0025825:19298-19317 | None:intergenic | 40.0% | |
CTAAGGCAGGTGGAATAATA+GGG | - | tig0025825:19382-19401 | Msa1425120:intron | 40.0% | |
!! | ACTCTGAGATATATGTGAGG+GGG | - | tig0025825:19782-19801 | Msa1425120:intron | 40.0% |
! | TACCGCTTATCGTTTTATCC+TGG | - | tig0025825:19893-19912 | Msa1425120:intron | 40.0% |
!! | TCTCTAGGATATGCAAAACC+AGG | + | tig0025825:19914-19933 | None:intergenic | 40.0% |
GTGTACCAACACTTAGTAGA+AGG | - | tig0025825:20070-20089 | Msa1425120:intron | 40.0% | |
GATAGGGAGATGTAAACTGT+AGG | - | tig0025825:20186-20205 | Msa1425120:intron | 40.0% | |
AACTGTAGGATACAACTAGG+AGG | - | tig0025825:20200-20219 | Msa1425120:intron | 40.0% | |
ACTGTAGGATACAACTAGGA+GGG | - | tig0025825:20201-20220 | Msa1425120:intron | 40.0% | |
AACTAGGAGGGTGAGTTAAT+CGG | - | tig0025825:20213-20232 | Msa1425120:intron | 40.0% | |
! | AGTTAATCGGAGAGTTGGTT+TGG | - | tig0025825:20226-20245 | Msa1425120:intron | 40.0% |
! | GTTAATCGGAGAGTTGGTTT+GGG | - | tig0025825:20227-20246 | Msa1425120:intron | 40.0% |
!! | GGCTGGTCTTATGCTTTAAA+GGG | + | tig0025825:20298-20317 | None:intergenic | 40.0% |
!! | TGGCTGGTCTTATGCTTTAA+AGG | + | tig0025825:20299-20318 | None:intergenic | 40.0% |
TAAGACCAGCCATGCTATAT+AGG | - | tig0025825:20307-20326 | Msa1425120:intron | 40.0% | |
AAGACCAGCCATGCTATATA+GGG | - | tig0025825:20308-20327 | Msa1425120:intron | 40.0% | |
AAGTATGGTCAATGTTGTGG+AGG | - | tig0025825:20361-20380 | Msa1425120:intron | 40.0% | |
TTGAGACCGGATACATGTTA+AGG | + | tig0025825:20577-20596 | None:intergenic | 40.0% | |
GTTCGGAGTTGAAAATCTCT+TGG | - | tig0025825:20723-20742 | Msa1425120:intron | 40.0% | |
CTTGGTCAATATCTTCATGC+AGG | - | tig0025825:20741-20760 | Msa1425120:intron | 40.0% | |
AAGATGCAATTGATCGAGCT+AGG | - | tig0025825:20809-20828 | Msa1425120:intron | 40.0% | |
AGATGCAATTGATCGAGCTA+GGG | - | tig0025825:20810-20829 | Msa1425120:intron | 40.0% | |
TGCAAAAGCTTCTTCACATC+TGG | + | tig0025825:20901-20920 | None:intergenic | 40.0% | |
! | AGATGTGAAGAAGCTTTTGC+AGG | - | tig0025825:20900-20919 | Msa1425120:intron | 40.0% |
! | GATGTGAAGAAGCTTTTGCA+GGG | - | tig0025825:20901-20920 | Msa1425120:intron | 40.0% |
! | ATGTGAAGAAGCTTTTGCAG+GGG | - | tig0025825:20902-20921 | Msa1425120:intron | 40.0% |
ATTGAGTCAGAAATGCGTAC+TGG | - | tig0025825:20961-20980 | Msa1425120:intron | 40.0% | |
!! | AGCAAAGCTTGTTGAGTACT+GGG | - | tig0025825:20987-21006 | Msa1425120:intron | 40.0% |
GCCTGTATTGCAGCAAATAA+TGG | + | tig0025825:21131-21150 | None:intergenic | 40.0% | |
GAAATCTGAGGAGGATATTG+AGG | - | tig0025825:21250-21269 | Msa1425120:CDS | 40.0% | |
TCTTGACCCTCTGCTTTAAT+GGG | + | tig0025825:21423-21442 | None:intergenic | 40.0% | |
TTCTTGACCCTCTGCTTTAA+TGG | + | tig0025825:21424-21443 | None:intergenic | 40.0% | |
ATTAAAGCAGAGGGTCAAGA+AGG | - | tig0025825:21423-21442 | Msa1425120:intron | 40.0% | |
AGAAGGTGAAGTAGAAGATG+AGG | - | tig0025825:21440-21459 | Msa1425120:intron | 40.0% | |
TCATCACCATGAAACAGTTC+TGG | + | tig0025825:21480-21499 | None:intergenic | 40.0% | |
TTCCTGTGAATGTACCATTG+TGG | + | tig0025825:21619-21638 | None:intergenic | 40.0% | |
ATGAAAGCCATGAAGGCTAT+GGG | - | tig0025825:21729-21748 | Msa1425120:intron | 40.0% | |
AGTCAGGTTAAAAGAGGTAG+AGG | + | tig0025825:22096-22115 | None:intergenic | 40.0% | |
TCTTCTTACAACGGCATCTA+CGG | - | tig0025825:22134-22153 | Msa1425120:intron | 40.0% | |
GTGGTAAGACTAGACAAGAT+AGG | + | tig0025825:22260-22279 | None:intergenic | 40.0% | |
CGAGAGTAAAGTAAGTGTAG+CGG | + | tig0025825:22307-22326 | None:intergenic | 40.0% | |
CACTTACTTTACTCTCGTGT+TGG | - | tig0025825:22310-22329 | Msa1425120:intron | 40.0% | |
! | GTTGTATGATACGGAGTGTT+GGG | + | tig0025825:22346-22365 | None:intergenic | 40.0% |
TGTTGTATGATACGGAGTGT+TGG | + | tig0025825:22347-22366 | None:intergenic | 40.0% | |
ACATTGCCAGTCATACTACA+TGG | - | tig0025825:22364-22383 | Msa1425120:intron | 40.0% | |
TAAGTGATAAATGTTGGCGC+AGG | - | tig0025825:22626-22645 | Msa1425120:CDS | 40.0% | |
! | ATTGGTGGCATGACAAATAC+AGG | - | tig0025825:22652-22671 | Msa1425120:intron | 40.0% |
GTGTTCATACTGGATATGAG+TGG | - | tig0025825:22700-22719 | Msa1425120:intron | 40.0% | |
TGCATCATAAGATTCCATGC+AGG | - | tig0025825:22873-22892 | Msa1425120:intron | 40.0% | |
GCATCATAAGATTCCATGCA+GGG | - | tig0025825:22874-22893 | Msa1425120:intron | 40.0% | |
CTTACAATGTCTTCGTATGG+TGG | + | tig0025825:22900-22919 | None:intergenic | 40.0% | |
ATGATTCCGATAGAATCCGG+AGG | - | tig0025825:15683-15702 | Msa1425120:CDS | 45.0% | |
TATCCGAGTCCGATTCATGT+CGG | + | tig0025825:15750-15769 | Msa1425110:three_prime_UTR | 45.0% | |
GTAGTAGTGATAGGGATGGT+AGG | - | tig0025825:15788-15807 | Msa1425120:intron | 45.0% | |
GTAGGAAGAGAAAGTCCTCA+AGG | - | tig0025825:15806-15825 | Msa1425120:intron | 45.0% | |
TTGAAGGCTCATACTGTGTC+TGG | - | tig0025825:16156-16175 | Msa1425120:intron | 45.0% | |
TGGTAGGCACTAGGTAGTTA+TGG | - | tig0025825:16401-16420 | Msa1425120:intron | 45.0% | |
TTGAGATTCCTCCCTATTGC+TGG | - | tig0025825:16492-16511 | Msa1425120:intron | 45.0% | |
!! | ACTAGTTGGTAGTGGCAAGT+TGG | + | tig0025825:17057-17076 | Msa1425110:three_prime_UTR | 45.0% |
! | ACTTGAGAAAGCACGACATG+AGG | - | tig0025825:17276-17295 | Msa1425120:CDS | 45.0% |
AGCACGACATGAGGAAGAAA+TGG | - | tig0025825:17285-17304 | Msa1425120:CDS | 45.0% | |
TGCCAGTTATTCCCAAACCT+TGG | - | tig0025825:17410-17429 | Msa1425120:intron | 45.0% | |
CACCAAGGTTTGGGAATAAC+TGG | + | tig0025825:17415-17434 | None:intergenic | 45.0% | |
!!! | CTTCTCTTTTTTCCCAGTCC+TGG | + | tig0025825:17521-17540 | None:intergenic | 45.0% |
GGACTGGGAAAAAAGAGAAG+TGG | - | tig0025825:17521-17540 | Msa1425120:CDS | 45.0% | |
CTGGGAAAAAAGAGAAGTGG+AGG | - | tig0025825:17524-17543 | Msa1425120:CDS | 45.0% | |
!! | AGATGGATTGATGCAGTCGT+GGG | + | tig0025825:17976-17995 | None:intergenic | 45.0% |
!! | AAGATGGATTGATGCAGTCG+TGG | + | tig0025825:17977-17996 | None:intergenic | 45.0% |
ACAACCATGAAGGCAGTGTA+TGG | - | tig0025825:18161-18180 | Msa1425120:intron | 45.0% | |
!! | TGTGGATTTTGGTGCGATGA+AGG | + | tig0025825:18220-18239 | None:intergenic | 45.0% |
! | GTCATGGCAGTTGTGGATTT+TGG | + | tig0025825:18231-18250 | None:intergenic | 45.0% |
AATTGTGGTCATGGCAGTTG+TGG | + | tig0025825:18238-18257 | None:intergenic | 45.0% | |
TCGCTGAGTGACAGAAATTG+TGG | + | tig0025825:18253-18272 | None:intergenic | 45.0% | |
GTTTGTATAGAGAGGGGGAA+TGG | - | tig0025825:18429-18448 | Msa1425120:intron | 45.0% | |
GGGTTTGACAGTGAACGAAA+TGG | - | tig0025825:18716-18735 | Msa1425120:intron | 45.0% | |
!! | ATATTCTACATGGGTTGGCG+TGG | + | tig0025825:18787-18806 | None:intergenic | 45.0% |
CGCCAACCCATGTAGAATAT+TGG | - | tig0025825:18787-18806 | Msa1425120:intron | 45.0% | |
!! | TTCTAAGGTGAGGACTGCTT+AGG | - | tig0025825:18977-18996 | Msa1425120:intron | 45.0% |
AGGTGGGAACATCTAATACG+TGG | - | tig0025825:19032-19051 | Msa1425120:intron | 45.0% | |
AATACGTGGAGTAATGTGGG+TGG | - | tig0025825:19046-19065 | Msa1425120:intron | 45.0% | |
CGCTATAGATGTCCAGACAT+GGG | + | tig0025825:19092-19111 | None:intergenic | 45.0% | |
ACGCTATAGATGTCCAGACA+TGG | + | tig0025825:19093-19112 | None:intergenic | 45.0% | |
TAGAGTCCATCCTAGATCAC+AGG | + | tig0025825:19161-19180 | None:intergenic | 45.0% | |
!! | CCTTACAAGCCAGTTTTGTG+AGG | + | tig0025825:19254-19273 | None:intergenic | 45.0% |
!! | CCTCACAAAACTGGCTTGTA+AGG | - | tig0025825:19251-19270 | Msa1425120:intron | 45.0% |
!! | CAAAACTGGCTTGTAAGGTG+AGG | - | tig0025825:19256-19275 | Msa1425120:intron | 45.0% |
AGACTAGTGCTTACAAGGCT+TGG | + | tig0025825:19293-19312 | None:intergenic | 45.0% | |
GCTAAGGCAGGTGGAATAAT+AGG | - | tig0025825:19381-19400 | Msa1425120:intron | 45.0% | |
AGATATATGTGAGGGGGTCA+CGG | - | tig0025825:19788-19807 | Msa1425120:intron | 45.0% | |
TGAACAATGGCACTGTCTCT+AGG | + | tig0025825:19929-19948 | None:intergenic | 45.0% | |
GTGAGCCTTCTACTAAGTGT+TGG | + | tig0025825:20078-20097 | None:intergenic | 45.0% | |
TCAACCCTATATAGCATGGC+TGG | + | tig0025825:20315-20334 | None:intergenic | 45.0% | |
GTTAAGGAAGCAACCCACAA+TGG | + | tig0025825:20561-20580 | None:intergenic | 45.0% | |
ACTCCTTCTGGTGAGTGATT+GGG | - | tig0025825:20765-20784 | Msa1425120:intron | 45.0% | |
TGCAGAATTGGAAGCTTTGC+AGG | - | tig0025825:20933-20952 | Msa1425120:intron | 45.0% | |
!! | CAGCAAAGCTTGTTGAGTAC+TGG | - | tig0025825:20986-21005 | Msa1425120:intron | 45.0% |
!! | CCTTGGCTTTATATATGCGG+AGG | + | tig0025825:21029-21048 | None:intergenic | 45.0% |
CCTCCGCATATATAAAGCCA+AGG | - | tig0025825:21026-21045 | Msa1425120:intron | 45.0% | |
ACGCCTTAAGAAACCATCAG+AGG | - | tig0025825:21196-21215 | Msa1425120:intron | 45.0% | |
CGCCTTAAGAAACCATCAGA+GGG | - | tig0025825:21197-21216 | Msa1425120:intron | 45.0% | |
CACCCTCTGATGGTTTCTTA+AGG | + | tig0025825:21202-21221 | None:intergenic | 45.0% | |
!! | ACCCTCTGCTTTAATGGGTT+CGG | + | tig0025825:21418-21437 | None:intergenic | 45.0% |
GTGAAGTAGAAGATGAGGCT+GGG | - | tig0025825:21445-21464 | Msa1425120:intron | 45.0% | |
GGAAGCTATTGATCCTGAAG+AGG | - | tig0025825:21506-21525 | Msa1425120:CDS | 45.0% | |
! | ATGGGCTAACTTGTCCACAA+TGG | - | tig0025825:21602-21621 | Msa1425120:intron | 45.0% |
GTCCACAATGGTACATTCAC+AGG | - | tig0025825:21614-21633 | Msa1425120:intron | 45.0% | |
GAGACGAATTCAGGAAGCAA+TGG | - | tig0025825:21671-21690 | Msa1425120:intron | 45.0% | |
GATGAAAGCCATGAAGGCTA+TGG | - | tig0025825:21728-21747 | Msa1425120:intron | 45.0% | |
AATAGCTCCCATAGCCTTCA+TGG | + | tig0025825:21739-21758 | None:intergenic | 45.0% | |
GCTATGGGAGCTATTGAAGA+AGG | - | tig0025825:21744-21763 | Msa1425120:intron | 45.0% | |
! | GGAGATGTAATGTTTGGCTC+TGG | - | tig0025825:21765-21784 | Msa1425120:intron | 45.0% |
CTCTGGTGCAGAAGTAAATC+TGG | - | tig0025825:21782-21801 | Msa1425120:intron | 45.0% | |
! | CAAGCCTTATCCCACTAAGT+GGG | - | tig0025825:21955-21974 | Msa1425120:intron | 45.0% |
! | AAGCCTTATCCCACTAAGTG+GGG | - | tig0025825:21956-21975 | Msa1425120:intron | 45.0% |
GAGGAGAGTCAGGTTAAAAG+AGG | + | tig0025825:22102-22121 | None:intergenic | 45.0% | |
AGATCAAATGGAGGAGAGTC+AGG | + | tig0025825:22112-22131 | None:intergenic | 45.0% | |
CTTCTTACAACGGCATCTAC+GGG | - | tig0025825:22135-22154 | Msa1425120:intron | 45.0% | |
! | AAGTAAGTGTAGCGGAGATG+AGG | + | tig0025825:22299-22318 | None:intergenic | 45.0% |
AAATGTTGGCGCAGGTCTAT+TGG | - | tig0025825:22634-22653 | Msa1425120:CDS | 45.0% | |
TCATGACAATCCACCTCCAA+AGG | - | tig0025825:22749-22768 | Msa1425120:intron | 45.0% | |
CACCTCCAAAGGTTGTACAA+GGG | - | tig0025825:22760-22779 | Msa1425120:intron | 45.0% | |
TACCCTTGTACAACCTTTGG+AGG | + | tig0025825:22765-22784 | None:intergenic | 45.0% | |
GTGTCTTGTCTACAAGGTCT+GGG | + | tig0025825:22806-22825 | None:intergenic | 45.0% | |
TGTGTCTTGTCTACAAGGTC+TGG | + | tig0025825:22807-22826 | None:intergenic | 45.0% | |
GAGCTTGTGTCTTGTCTACA+AGG | + | tig0025825:22812-22831 | None:intergenic | 45.0% | |
ATTGAGAAGGATGGCAGCAA+TGG | - | tig0025825:22843-22862 | Msa1425120:intron | 45.0% | |
ACCACTCCTCCGGATTCTAT+CGG | + | tig0025825:15692-15711 | Msa1425110:three_prime_UTR | 50.0% | |
GGAGTGGTCACCATAGTGAT+CGG | - | tig0025825:15704-15723 | Msa1425120:CDS | 50.0% | |
! | TTTGTGGAGAGGGTAGTGGT+AGG | - | tig0025825:16385-16404 | Msa1425120:intron | 50.0% |
TTCAGCAACCAGCAATAGGG+AGG | + | tig0025825:16503-16522 | Msa1425110:intron | 50.0% | |
TAATCAATAACCCGGGGGCT+GGG | + | tig0025825:17139-17158 | Msa1425110:three_prime_UTR | 50.0% | |
ATAATCAATAACCCGGGGGC+TGG | + | tig0025825:17140-17159 | Msa1425110:intron | 50.0% | |
! | TGGAGGTATGGCTGCTTGAA+TGG | - | tig0025825:17541-17560 | Msa1425120:CDS | 50.0% |
GTTGCCATACACTGCCTTCA+TGG | + | tig0025825:18168-18187 | None:intergenic | 50.0% | |
AGTGAAGAAAACGGGTGAGG+TGG | + | tig0025825:18340-18359 | None:intergenic | 50.0% | |
AGCAGTGAAGAAAACGGGTG+AGG | + | tig0025825:18343-18362 | None:intergenic | 50.0% | |
CTGCTTTCCAACTGCAGTGA+TGG | - | tig0025825:18358-18377 | Msa1425120:intron | 50.0% | |
GCAGCAGATGGTGTTCAATC+TGG | - | tig0025825:18407-18426 | Msa1425120:intron | 50.0% | |
GCAGTCCTCACCTTAGAAGT+TGG | + | tig0025825:18975-18994 | None:intergenic | 50.0% | |
! | CGGTTTTGCGAGGTTGAGTT+GGG | + | tig0025825:19211-19230 | None:intergenic | 50.0% |
CCAACTCAACCTCGCAAAAC+CGG | - | tig0025825:19209-19228 | Msa1425120:intron | 50.0% | |
TGTAAGGTGAGGGTTGTCCA+AGG | - | tig0025825:19267-19286 | Msa1425120:intron | 50.0% | |
TCAAATCCTAAGCCTGAGGC+GGG | + | tig0025825:19347-19366 | None:intergenic | 50.0% | |
GTCAAATCCTAAGCCTGAGG+CGG | + | tig0025825:19348-19367 | None:intergenic | 50.0% | |
GGTGTCAAATCCTAAGCCTG+AGG | + | tig0025825:19351-19370 | None:intergenic | 50.0% | |
AGGATTTGACACCTGAAGCG+TGG | - | tig0025825:19358-19377 | Msa1425120:intron | 50.0% | |
GGATTTGACACCTGAAGCGT+GGG | - | tig0025825:19359-19378 | Msa1425120:intron | 50.0% | |
GGGTGAGTTAATCGGAGAGT+TGG | - | tig0025825:20221-20240 | Msa1425120:intron | 50.0% | |
CACTCCTTCTGGTGAGTGAT+TGG | - | tig0025825:20764-20783 | Msa1425120:intron | 50.0% | |
ACTCCCAATCACTCACCAGA+AGG | + | tig0025825:20771-20790 | None:intergenic | 50.0% | |
TCTCTGTTCAGCAAGCACCT+CGG | + | tig0025825:20857-20876 | None:intergenic | 50.0% | |
GGGGAAGACACATGCAGAAT+TGG | - | tig0025825:20921-20940 | Msa1425120:intron | 50.0% | |
TCCCGAACCCATTAAAGCAG+AGG | - | tig0025825:21413-21432 | Msa1425120:intron | 50.0% | |
!! | CCCTCTGCTTTAATGGGTTC+GGG | + | tig0025825:21417-21436 | None:intergenic | 50.0% |
CCCGAACCCATTAAAGCAGA+GGG | - | tig0025825:21414-21433 | Msa1425120:intron | 50.0% | |
GGTGAAGTAGAAGATGAGGC+TGG | - | tig0025825:21444-21463 | Msa1425120:intron | 50.0% | |
AGTAGAGCTCTGTCCTCTTC+AGG | + | tig0025825:21522-21541 | None:intergenic | 50.0% | |
TGAAGAGGACAGAGCTCTAC+TGG | - | tig0025825:21521-21540 | Msa1425120:CDS | 50.0% | |
AGAGCAGCAGAGACGAATTC+AGG | - | tig0025825:21662-21681 | Msa1425120:intron | 50.0% | |
CCACTTAGTGGGATAAGGCT+TGG | + | tig0025825:21957-21976 | None:intergenic | 50.0% | |
! | CCAAGCCTTATCCCACTAAG+TGG | - | tig0025825:21954-21973 | Msa1425120:intron | 50.0% |
CTTATCCCACTAAGTGGGGT+CGG | - | tig0025825:21960-21979 | Msa1425120:intron | 50.0% | |
ACACCATTCGAGAGAGAGTG+GGG | + | tig0025825:22227-22246 | None:intergenic | 50.0% | |
GACACCATTCGAGAGAGAGT+GGG | + | tig0025825:22228-22247 | None:intergenic | 50.0% | |
TGACACCATTCGAGAGAGAG+TGG | + | tig0025825:22229-22248 | None:intergenic | 50.0% | |
AGGATGTTGCGTTGGATGAG+TGG | + | tig0025825:22279-22298 | None:intergenic | 50.0% | |
!! | GTATGATACGGAGTGTTGGG+CGG | + | tig0025825:22343-22362 | None:intergenic | 50.0% |
! | CCTTGTACAACCTTTGGAGG+TGG | + | tig0025825:22762-22781 | None:intergenic | 50.0% |
CCACCTCCAAAGGTTGTACA+AGG | - | tig0025825:22759-22778 | Msa1425120:intron | 50.0% | |
TCCGATAGAATCCGGAGGAG+TGG | - | tig0025825:15688-15707 | Msa1425120:CDS | 55.0% | |
CACTATGGTGACCACTCCTC+CGG | + | tig0025825:15702-15721 | Msa1425110:three_prime_UTR | 55.0% | |
GTGGTCACCATAGTGATCGG+CGG | - | tig0025825:15707-15726 | Msa1425120:CDS | 55.0% | |
TCTGTGACCGCCGATCACTA+TGG | + | tig0025825:15717-15736 | Msa1425110:three_prime_UTR | 55.0% | |
ATAGTGATCGGCGGTCACAG+AGG | - | tig0025825:15716-15735 | Msa1425120:CDS | 55.0% | |
GAGACGGAGCCGACATGAAT+CGG | - | tig0025825:15738-15757 | Msa1425120:CDS | 55.0% | |
GAGCCGACATGAATCGGACT+CGG | - | tig0025825:15744-15763 | Msa1425120:CDS | 55.0% | |
! | GGCGAAAAAGGCGCAGAGAA+AGG | - | tig0025825:15861-15880 | Msa1425120:intron | 55.0% |
! | AGAGGGTAGTGGTAGGCACT+AGG | - | tig0025825:16392-16411 | Msa1425120:intron | 55.0% |
AATCAATAACCCGGGGGCTG+GGG | + | tig0025825:17138-17157 | Msa1425110:three_prime_UTR | 55.0% | |
TCGAGCTGAGTTCCAGGACT+GGG | - | tig0025825:17506-17525 | Msa1425120:intron | 55.0% | |
CAGTCGTGGGTCGAAGACAT+GGG | + | tig0025825:17963-17982 | None:intergenic | 55.0% | |
CAGCAGCACTGTGACGACAA+CGG | + | tig0025825:18312-18331 | None:intergenic | 55.0% | |
ACTCGGTCCATCACTGCAGT+TGG | + | tig0025825:18368-18387 | None:intergenic | 55.0% | |
GATCTCAACACGCCCATGTC+TGG | - | tig0025825:19077-19096 | Msa1425120:intron | 55.0% | |
! | CCGGTTTTGCGAGGTTGAGT+TGG | + | tig0025825:19212-19231 | None:intergenic | 55.0% |
GTGCTTACAAGGCTTGGCCT+TGG | + | tig0025825:19287-19306 | None:intergenic | 55.0% | |
CTTCATGCAGGCACTCCTTC+TGG | - | tig0025825:20753-20772 | Msa1425120:intron | 55.0% | |
ATTGATCGAGCTAGGGTGCG+TGG | - | tig0025825:20817-20836 | Msa1425120:intron | 55.0% | |
! | GAGGTGCTTGCTGAACAGAG+AGG | - | tig0025825:20856-20875 | Msa1425120:intron | 55.0% |
CGACCCCACTTAGTGGGATA+AGG | + | tig0025825:21962-21981 | None:intergenic | 55.0% | |
TGTAGCCGACCCCACTTAGT+GGG | + | tig0025825:21968-21987 | None:intergenic | 55.0% | |
ATGTAGCCGACCCCACTTAG+TGG | + | tig0025825:21969-21988 | None:intergenic | 55.0% | |
ACTAAGTGGGGTCGGCTACA+TGG | - | tig0025825:21968-21987 | Msa1425120:intron | 55.0% | |
TACCCCCACTCTCTCTCGAA+TGG | - | tig0025825:22221-22240 | Msa1425120:intron | 55.0% | |
CACCATTCGAGAGAGAGTGG+GGG | + | tig0025825:22226-22245 | None:intergenic | 55.0% | |
CGGAGATGAGGATGTTGCGT+TGG | + | tig0025825:22287-22306 | None:intergenic | 55.0% | |
TGTTGGCGCAGGTCTATTGG+TGG | - | tig0025825:22637-22656 | Msa1425120:CDS | 55.0% | |
GGCATGACAAATACAGGCCC+AGG | - | tig0025825:22658-22677 | Msa1425120:intron | 55.0% | |
ATCGGCGGTCACAGAGGAGA+CGG | - | tig0025825:15722-15741 | Msa1425120:CDS | 60.0% | |
! | CGTTCTGGGTACCATCTGCC+TGG | - | tig0025825:17369-17388 | Msa1425120:CDS | 60.0% |
ACGTGCTCGAGCTGAGTTCC+AGG | - | tig0025825:17500-17519 | Msa1425120:intron | 60.0% | |
CTCGAGCTGAGTTCCAGGAC+TGG | - | tig0025825:17505-17524 | Msa1425120:intron | 60.0% | |
TCGTGGGTCGAAGACATGGG+AGG | + | tig0025825:17960-17979 | None:intergenic | 60.0% | |
GCAGTCGTGGGTCGAAGACA+TGG | + | tig0025825:17964-17983 | None:intergenic | 60.0% | |
CAAATCTCGACACCCGCCTC+AGG | - | tig0025825:19332-19351 | Msa1425120:intron | 60.0% | |
! | GACACCTGAAGCGTGGGCTA+AGG | - | tig0025825:19365-19384 | Msa1425120:intron | 60.0% |
TGGAGAAGAACCTCCAGCCG+AGG | - | tig0025825:20837-20856 | Msa1425120:intron | 60.0% | |
TGTTCAGCAAGCACCTCGGC+TGG | + | tig0025825:20853-20872 | None:intergenic | 60.0% | |
CTTCGTATGGTGGCCCTGCA+TGG | + | tig0025825:22890-22909 | None:intergenic | 60.0% | |
CCTTCATACACCCCAGCCCC+CGG | - | tig0025825:17125-17144 | Msa1425120:CDS | 65.0% | |
CTTCATACACCCCAGCCCCC+GGG | - | tig0025825:17126-17145 | Msa1425120:CDS | 65.0% | |
TCGACACCCGCCTCAGGCTT+AGG | - | tig0025825:19338-19357 | Msa1425120:intron | 65.0% | |
CCTGCCTTAGCCCACGCTTC+AGG | + | tig0025825:19372-19391 | None:intergenic | 65.0% | |
! | CCTGAAGCGTGGGCTAAGGC+AGG | - | tig0025825:19369-19388 | Msa1425120:intron | 65.0% |
! | GAAGCGTGGGCTAAGGCAGG+TGG | - | tig0025825:19372-19391 | Msa1425120:intron | 65.0% |
TCAGCAAGCACCTCGGCTGG+AGG | + | tig0025825:20850-20869 | None:intergenic | 65.0% | |
CCGGGGGCTGGGGTGTATGA+AGG | + | tig0025825:17128-17147 | Msa1425110:three_prime_UTR | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0025825 | gene | 15683 | 23109 | 15683 | ID=Msa1425120;Name=Msa1425120 |
tig0025825 | mRNA | 15683 | 23109 | 15683 | ID=Msa1425120-mRNA-1;Parent=Msa1425120;Name=Msa1425120-mRNA-1;_AED=0.15;_eAED=0.21;_QI=0|0.36|0.33|1|0.90|0.83|12|0|577 |
tig0025825 | exon | 22987 | 23109 | 22987 | ID=Msa1425120-mRNA-1:exon:4186;Parent=Msa1425120-mRNA-1 |
tig0025825 | exon | 22566 | 22657 | 22566 | ID=Msa1425120-mRNA-1:exon:4185;Parent=Msa1425120-mRNA-1 |
tig0025825 | exon | 21833 | 21932 | 21833 | ID=Msa1425120-mRNA-1:exon:4184;Parent=Msa1425120-mRNA-1 |
tig0025825 | exon | 21486 | 21557 | 21486 | ID=Msa1425120-mRNA-1:exon:4183;Parent=Msa1425120-mRNA-1 |
tig0025825 | exon | 21199 | 21309 | 21199 | ID=Msa1425120-mRNA-1:exon:4182;Parent=Msa1425120-mRNA-1 |
tig0025825 | exon | 19980 | 20075 | 19980 | ID=Msa1425120-mRNA-1:exon:4181;Parent=Msa1425120-mRNA-1 |
tig0025825 | exon | 17745 | 18029 | 17745 | ID=Msa1425120-mRNA-1:exon:4180;Parent=Msa1425120-mRNA-1 |
tig0025825 | exon | 17508 | 17643 | 17508 | ID=Msa1425120-mRNA-1:exon:4179;Parent=Msa1425120-mRNA-1 |
tig0025825 | exon | 17250 | 17404 | 17250 | ID=Msa1425120-mRNA-1:exon:4178;Parent=Msa1425120-mRNA-1 |
tig0025825 | exon | 16980 | 17156 | 16980 | ID=Msa1425120-mRNA-1:exon:4177;Parent=Msa1425120-mRNA-1 |
tig0025825 | exon | 15878 | 16144 | 15878 | ID=Msa1425120-mRNA-1:exon:4176;Parent=Msa1425120-mRNA-1 |
tig0025825 | exon | 15683 | 15802 | 15683 | ID=Msa1425120-mRNA-1:exon:4175;Parent=Msa1425120-mRNA-1 |
tig0025825 | CDS | 22987 | 23109 | 22987 | ID=Msa1425120-mRNA-1:cds;Parent=Msa1425120-mRNA-1 |
tig0025825 | CDS | 22566 | 22657 | 22566 | ID=Msa1425120-mRNA-1:cds;Parent=Msa1425120-mRNA-1 |
tig0025825 | CDS | 21833 | 21932 | 21833 | ID=Msa1425120-mRNA-1:cds;Parent=Msa1425120-mRNA-1 |
tig0025825 | CDS | 21486 | 21557 | 21486 | ID=Msa1425120-mRNA-1:cds;Parent=Msa1425120-mRNA-1 |
tig0025825 | CDS | 21199 | 21309 | 21199 | ID=Msa1425120-mRNA-1:cds;Parent=Msa1425120-mRNA-1 |
tig0025825 | CDS | 19980 | 20075 | 19980 | ID=Msa1425120-mRNA-1:cds;Parent=Msa1425120-mRNA-1 |
tig0025825 | CDS | 17745 | 18029 | 17745 | ID=Msa1425120-mRNA-1:cds;Parent=Msa1425120-mRNA-1 |
tig0025825 | CDS | 17508 | 17643 | 17508 | ID=Msa1425120-mRNA-1:cds;Parent=Msa1425120-mRNA-1 |
tig0025825 | CDS | 17250 | 17404 | 17250 | ID=Msa1425120-mRNA-1:cds;Parent=Msa1425120-mRNA-1 |
tig0025825 | CDS | 16980 | 17156 | 16980 | ID=Msa1425120-mRNA-1:cds;Parent=Msa1425120-mRNA-1 |
tig0025825 | CDS | 15878 | 16144 | 15878 | ID=Msa1425120-mRNA-1:cds;Parent=Msa1425120-mRNA-1 |
tig0025825 | CDS | 15683 | 15802 | 15683 | ID=Msa1425120-mRNA-1:cds;Parent=Msa1425120-mRNA-1 |
Gene Sequence |
Protein sequence |