AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1425120


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1425120 MtrunA17_Chr1g0179691 90.860 558 19 4 52 577 101 658 0.0 1020
Msa1425120 MtrunA17_Chr7g0265361 77.661 573 88 6 42 577 79 648 0.0 884
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1425120 AT1G03910.1 70.053 571 136 4 42 577 102 672 0.0 801
Msa1425120 AT1G03910.2 61.228 619 153 9 42 577 102 716 0.0 714
Msa1425120 AT2G36815.2 52.041 98 33 2 202 298 17 101 4.45e-21 88.6
Msa1425120 AT2G36815.1 53.125 96 31 2 203 297 24 106 6.03e-21 88.6

Find 142 sgRNAs with CRISPR-Local

Find 539 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATGCTTGCGTAACATTT+TGG 0.170202 tig0025825:+17599 None:intergenic
TTCTTGACCCTCTGCTTTAA+TGG 0.192895 tig0025825:+17349 Msa1425110:three_prime_UTR
TGCAATACAGGCTTGTTTAA+AGG 0.200086 tig0025825:-17631 Msa1425120:intron
TGTTGTTATATCAAATAAAA+TGG 0.231224 tig0025825:-21198 Msa1425120:intron
CCCTCTGCTTTAATGGGTTC+GGG 0.271684 tig0025825:+17356 Msa1425110:three_prime_UTR
ACCCTCTGCTTTAATGGGTT+CGG 0.272032 tig0025825:+17355 Msa1425110:three_prime_UTR
ATCAGAGGGTGAAGATAAAT+TGG 0.274595 tig0025825:-17559 Msa1425120:CDS
CGCCAACCCATGTAGAATAT+TGG 0.284425 tig0025825:-19983 Msa1425120:CDS
GTTGAAATACTTTGGTTTCC+TGG 0.284593 tig0025825:+16094 Msa1425110:three_prime_UTR
AATAGCTCCCATAGCCTTCA+TGG 0.287973 tig0025825:+17034 Msa1425110:three_prime_UTR
TGCAGAATTGGAAGCTTTGC+AGG 0.295132 tig0025825:-17837 Msa1425120:CDS
TCTTGACCCTCTGCTTTAAT+GGG 0.310995 tig0025825:+17350 Msa1425110:three_prime_UTR
CACTCCTTCTGGTGAGTGAT+TGG 0.313594 tig0025825:-18006 Msa1425120:CDS
ATGCTATTTGTAGGTTTGTT+TGG 0.327045 tig0025825:-21923 Msa1425120:intron
TGTGTCTTGTCTACAAGGTC+TGG 0.329849 tig0025825:+15966 Msa1425110:three_prime_UTR
ACGTGCTCGAGCTGAGTTCC+AGG 0.339829 tig0025825:-21270 Msa1425120:CDS
CTTCATGCAGGCACTCCTTC+TGG 0.341193 tig0025825:-18017 Msa1425120:intron
TTAACTGAAAATTCATCAAT+AGG 0.343796 tig0025825:+21864 None:intergenic
GACTTACTTCTCATTAAGAT+TGG 0.354150 tig0025825:+22559 None:intergenic
TCATCACCATGAAACAGTTC+TGG 0.358787 tig0025825:+17293 Msa1425110:three_prime_UTR
TTATACCCTTGTACAACCTT+TGG 0.359525 tig0025825:+16005 Msa1425110:three_prime_UTR
AGAGCAGCAGAGACGAATTC+AGG 0.361317 tig0025825:-17108 Msa1425120:CDS
CACCCTCTGATGGTTTCTTA+AGG 0.361872 tig0025825:+17571 None:intergenic
TATTTCAACCGTGTTCATAC+TGG 0.366794 tig0025825:-16080 Msa1425120:CDS
CTGATGATAGTAGTAGTGAT+AGG 0.370578 tig0025825:-22991 Msa1425120:CDS
AAAGTGATCTCTTTGCATAT+TGG 0.373779 tig0025825:+17381 None:intergenic
TGCAAAAGCTTCTTCACATC+TGG 0.376117 tig0025825:+17872 None:intergenic
CTCTGGTGCAGAAGTAAATC+TGG 0.379600 tig0025825:-16988 Msa1425120:CDS
CAGCAAAGCTTGTTGAGTAC+TGG 0.391117 tig0025825:-17784 Msa1425120:CDS
GAAGAAGGAGATGTAATGTT+TGG 0.391656 tig0025825:-17011 Msa1425120:CDS
TGATGATATCAAAATGCATT+TGG 0.392676 tig0025825:-20021 Msa1425120:CDS
GGGGAAGACACATGCAGAAT+TGG 0.400110 tig0025825:-17849 Msa1425120:CDS
TCCGCATTGTAAACAAAGAA+TGG 0.405433 tig0025825:-15776 Msa1425120:CDS
TTGAAGGCTCATACTGTGTC+TGG 0.405951 tig0025825:-22614 Msa1425120:CDS
GAGCTTGTGTCTTGTCTACA+AGG 0.410873 tig0025825:+15961 Msa1425110:three_prime_UTR
GCCAACCCATGTAGAATATT+GGG 0.412226 tig0025825:-19982 Msa1425120:CDS
AAATGCATTTGGACTTTGAC+AGG 0.412773 tig0025825:-20010 Msa1425120:CDS
ACTCCTTCTGGTGAGTGATT+GGG 0.418323 tig0025825:-18005 Msa1425120:CDS
TACCCTTGTACAACCTTTGG+AGG 0.431571 tig0025825:+16008 Msa1425110:three_prime_UTR
TCAAATGACTCGAATCCATT+TGG 0.433737 tig0025825:-22587 Msa1425120:CDS
TGGAGGTATGGCTGCTTGAA+TGG 0.436425 tig0025825:-21229 Msa1425120:CDS
ATGAAACAGTTCTGGTGAAA+AGG 0.440946 tig0025825:+17301 Msa1425110:three_prime_UTR
AAATGTTGGCGCAGGTCTAT+TGG 0.444124 tig0025825:-16136 Msa1425120:intron
AGTAGAGCTCTGTCCTCTTC+AGG 0.445180 tig0025825:+17251 Msa1425110:intron
GAAAGTTGCTAAGAAATTGA+AGG 0.448557 tig0025825:-22630 Msa1425120:CDS
TGAAGAGGACAGAGCTCTAC+TGG 0.451227 tig0025825:-17249 Msa1425120:intron
TTGAAATACTTTGGTTTCCT+GGG 0.453521 tig0025825:+16095 Msa1425110:three_prime_UTR
TGAACACGGTTGAAATACTT+TGG 0.455750 tig0025825:+16086 Msa1425110:three_prime_UTR
AGCACGACATGAGGAAGAAA+TGG 0.455954 tig0025825:-21485 Msa1425120:intron
GAAATCTGAGGAGGATATTG+AGG 0.461280 tig0025825:-17520 Msa1425120:CDS
TGTTCAGCAAGCACCTCGGC+TGG 0.461619 tig0025825:+17920 None:intergenic
TTATTTGATATAACAACAAA+TGG 0.461759 tig0025825:+21203 None:intergenic
GTGTCTTGTCTACAAGGTCT+GGG 0.462415 tig0025825:+15967 Msa1425110:three_prime_UTR
CCGCATTGTAAACAAAGAAT+GGG 0.467266 tig0025825:-15775 Msa1425120:CDS
AAAGAGACAGAGAGAAAGGA+TGG 0.468118 tig0025825:-21832 Msa1425120:intron
TGGGAATATTCTCACAAGAA+AGG 0.469421 tig0025825:-15756 Msa1425120:CDS
GAGACGGAGCCGACATGAAT+CGG 0.472964 tig0025825:-23032 Msa1425120:CDS
AATTTATCTTCACCCTCTGA+TGG 0.482921 tig0025825:+17561 None:intergenic
CACTATGGTGACCACTCCTC+CGG 0.484550 tig0025825:+23071 None:intergenic
ATTGGTGGCATGACAAATAC+AGG 0.484625 tig0025825:-16118 Msa1425120:CDS
AAATTATCTTCAGATGGAGC+AGG 0.490796 tig0025825:+17068 Msa1425110:three_prime_UTR
ATTGAGCGTGATGTTGTTCA+AGG 0.501715 tig0025825:-21891 Msa1425120:CDS
ATCTCAAAATTATCTTCAGA+TGG 0.502531 tig0025825:+17062 Msa1425110:three_prime_UTR
CCTTGTACAACCTTTGGAGG+TGG 0.503514 tig0025825:+16011 Msa1425110:three_prime_UTR
CCACCTCCAAAGGTTGTACA+AGG 0.506231 tig0025825:-16011 Msa1425120:CDS
TTAAGATTGGAATCACCAAA+TGG 0.507057 tig0025825:+22572 None:intergenic
TCCTTCTCAATAGTGTAAGT+TGG 0.508185 tig0025825:+15939 Msa1425110:three_prime_UTR
GATGAAAGCCATGAAGGCTA+TGG 0.508933 tig0025825:-17042 Msa1425120:CDS
AGCAAAGCTTGTTGAGTACT+GGG 0.510191 tig0025825:-17783 Msa1425120:CDS
GGTGAAGTAGAAGATGAGGC+TGG 0.513288 tig0025825:-17326 Msa1425120:CDS
GGGTTTGACAGTGAACGAAA+TGG 0.515774 tig0025825:-20054 Msa1425120:CDS
AAGATGCAATTGATCGAGCT+AGG 0.518701 tig0025825:-17961 Msa1425120:CDS
TCGAGCTGAGTTCCAGGACT+GGG 0.522136 tig0025825:-21264 Msa1425120:CDS
CCAGAAATTATCTGCGGTAG+CGG 0.525395 tig0025825:+15676 Msa1425110:three_prime_UTR
GGCATGACAAATACAGGCCC+AGG 0.525776 tig0025825:-16112 Msa1425120:CDS
CTCGAGCTGAGTTCCAGGAC+TGG 0.526610 tig0025825:-21265 Msa1425120:CDS
AATGCAGGCGGAAATTGAAA+AGG 0.529839 tig0025825:-21542 Msa1425120:intron
CCGATGATTCCGATAGAATC+CGG 0.534725 tig0025825:-23090 Msa1425120:CDS
ACCACTCCTCCGGATTCTAT+CGG 0.536244 tig0025825:+23081 None:intergenic
AGAAGTAAATCTGGATTCAC+AGG 0.541558 tig0025825:-16979 Msa1425120:intron
TCTGTGACCGCCGATCACTA+TGG 0.542891 tig0025825:+23056 None:intergenic
CTTCGTATGGTGGCCCTGCA+TGG 0.548737 tig0025825:+15883 Msa1425110:three_prime_UTR
TGATGATAGTAGTAGTGATA+GGG 0.552104 tig0025825:-22990 Msa1425120:CDS
ATACCTCCCAATATTCTACA+TGG 0.559393 tig0025825:+19976 None:intergenic
TCCCAATATTCTACATGGGT+TGG 0.568443 tig0025825:+19981 None:intergenic
CCGGATTCTATCGGAATCAT+CGG 0.570818 tig0025825:+23090 None:intergenic
GCTATGGGAGCTATTGAAGA+AGG 0.572049 tig0025825:-17026 Msa1425120:CDS
ATGAAAGCCATGAAGGCTAT+GGG 0.576335 tig0025825:-17041 Msa1425120:CDS
ATTAAAGCAGAGGGTCAAGA+AGG 0.580470 tig0025825:-17347 Msa1425120:CDS
AGACTTACAATGTCTTCGTA+TGG 0.580822 tig0025825:+15870 Msa1425110:intron
ATTGAGAAGGATGGCAGCAA+TGG 0.582219 tig0025825:-15927 Msa1425120:CDS
TCAGCAAGCACCTCGGCTGG+AGG 0.583261 tig0025825:+17923 None:intergenic
GAAATTATCTGCGGTAGCGG+TGG 0.585724 tig0025825:+15679 Msa1425110:three_prime_UTR
AGAAGGTGAAGTAGAAGATG+AGG 0.586312 tig0025825:-17330 Msa1425120:CDS
CCCGAACCCATTAAAGCAGA+GGG 0.588808 tig0025825:-17356 Msa1425120:CDS
ATTGAGTCAGAAATGCGTAC+TGG 0.589102 tig0025825:-17809 Msa1425120:CDS
CCCATTCTTTGTTTACAATG+CGG 0.589870 tig0025825:+15775 Msa1425110:three_prime_UTR
TCCGATAGAATCCGGAGGAG+TGG 0.590097 tig0025825:-23082 Msa1425120:CDS
GGAGATGTAATGTTTGGCTC+TGG 0.590473 tig0025825:-17005 Msa1425120:CDS
TTACCTTGGCTTTATATATG+CGG 0.592230 tig0025825:+17741 None:intergenic
ATCGGCGGTCACAGAGGAGA+CGG 0.593716 tig0025825:-23048 Msa1425120:CDS
TCCCGAACCCATTAAAGCAG+AGG 0.593821 tig0025825:-17357 Msa1425120:CDS
TGCATCATAAGATTCCATGC+AGG 0.594356 tig0025825:-15897 Msa1425120:CDS
ATTGATCGAGCTAGGGTGCG+TGG 0.595446 tig0025825:-17953 Msa1425120:CDS
ATATTCTACATGGGTTGGCG+TGG 0.603561 tig0025825:+19986 None:intergenic
GCATCATAAGATTCCATGCA+GGG 0.604220 tig0025825:-15896 Msa1425120:CDS
GATAGTAGTAGTGATAGGGA+TGG 0.605108 tig0025825:-22986 Msa1425120:intron
TGTTGGCGCAGGTCTATTGG+TGG 0.605871 tig0025825:-16133 Msa1425120:intron
CTTACAATGTCTTCGTATGG+TGG 0.608002 tig0025825:+15873 Msa1425110:intron
AGATGCAATTGATCGAGCTA+GGG 0.609364 tig0025825:-17960 Msa1425120:CDS
ACTTACACTATTGAGAAGGA+TGG 0.610559 tig0025825:-15936 Msa1425120:CDS
GTTTCATGGTGATGAAAATG+AGG 0.610771 tig0025825:-17285 Msa1425120:CDS
TGGAGAAGAACCTCCAGCCG+AGG 0.612324 tig0025825:-17933 Msa1425120:CDS
TCATGACAATCCACCTCCAA+AGG 0.613499 tig0025825:-16021 Msa1425120:CDS
GAGACGAATTCAGGAAGCAA+TGG 0.614187 tig0025825:-17099 Msa1425120:CDS
CCTTGGCTTTATATATGCGG+AGG 0.616946 tig0025825:+17744 None:intergenic
GTGAAGTAGAAGATGAGGCT+GGG 0.617278 tig0025825:-17325 Msa1425120:CDS
TCCAACTTACACTATTGAGA+AGG 0.618655 tig0025825:-15940 Msa1425120:CDS
ACTCCCAATCACTCACCAGA+AGG 0.619083 tig0025825:+18002 None:intergenic
CGCCTTAAGAAACCATCAGA+GGG 0.619195 tig0025825:-17573 Msa1425120:CDS
CCTCCGCATATATAAAGCCA+AGG 0.624228 tig0025825:-17744 Msa1425120:intron
AATGCATTTGGACTTTGACA+GGG 0.628278 tig0025825:-20009 Msa1425120:CDS
GGAGTGGTCACCATAGTGAT+CGG 0.640226 tig0025825:-23066 Msa1425120:CDS
ACTTGAGAAAGCACGACATG+AGG 0.644679 tig0025825:-21494 Msa1425120:CDS
GGAAGCTATTGATCCTGAAG+AGG 0.658125 tig0025825:-17264 Msa1425120:CDS
TGCTCATGTTATGAAATCTG+AGG 0.658528 tig0025825:-17532 Msa1425120:CDS
TTTAAGTGCACATTTGAACG+TGG 0.660103 tig0025825:-15732 Msa1425120:CDS
TACCTCCCAATATTCTACAT+GGG 0.662886 tig0025825:+19977 None:intergenic
GAGCCGACATGAATCGGACT+CGG 0.665866 tig0025825:-23026 Msa1425120:CDS
TCATGTTATGAAATCTGAGG+AGG 0.666704 tig0025825:-17529 Msa1425120:CDS
GTGTTCATACTGGATATGAG+TGG 0.672306 tig0025825:-16070 Msa1425120:CDS
TATCCGAGTCCGATTCATGT+CGG 0.677662 tig0025825:+23023 None:intergenic
ATAGTGATCGGCGGTCACAG+AGG 0.679327 tig0025825:-23054 Msa1425120:CDS
AACCCATGTAGAATATTGGG+AGG 0.679555 tig0025825:-19979 Msa1425120:intron
ACGCCTTAAGAAACCATCAG+AGG 0.683028 tig0025825:-17574 Msa1425120:CDS
CACCTCCAAAGGTTGTACAA+GGG 0.704703 tig0025825:-16010 Msa1425120:CDS
GTGGTCACCATAGTGATCGG+CGG 0.706810 tig0025825:-23063 Msa1425120:CDS
ACTCATATCCAGTATGAACA+CGG 0.712518 tig0025825:+16072 Msa1425110:three_prime_UTR
ATGATTCCGATAGAATCCGG+AGG 0.713791 tig0025825:-23087 Msa1425120:CDS
GAGGTGCTTGCTGAACAGAG+AGG 0.735663 tig0025825:-17914 Msa1425120:CDS
TCTCTGTTCAGCAAGCACCT+CGG 0.736566 tig0025825:+17916 None:intergenic
AGAGTGCCAGAAATTATCTG+CGG 0.744813 tig0025825:+15670 Msa1425110:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTAATGATC+TGG - tig0025825:16018-16037 Msa1425120:CDS 10.0%
!! TATATGTGTAAATATAAATA+TGG - tig0025825:16438-16457 Msa1425120:intron 10.0%
!!! ATAATTAATTTTTTATGACA+TGG + tig0025825:17881-17900 None:intergenic 10.0%
!!! ATTAAATAAATCATAGTTTT+CGG + tig0025825:18458-18477 None:intergenic 10.0%
!! ATTAAAACTAAATGATTAAA+AGG + tig0025825:19486-19505 None:intergenic 10.0%
!!! AAATAGTTTTTTCAATTTAA+TGG + tig0025825:19554-19573 None:intergenic 10.0%
!! TAATGTTAATTATTATTAGA+TGG - tig0025825:21894-21913 Msa1425120:CDS 10.0%
!! TTAAGAAAAAAAAATTAGTT+AGG - tig0025825:22398-22417 Msa1425120:intron 10.0%
!! ATCTGAAAATTATATTTCTT+CGG + tig0025825:16303-16322 Msa1425110:intron 15.0%
!!! TATAATTTTCAGATATGTAT+TGG - tig0025825:16309-16328 Msa1425120:intron 15.0%
!! AAGAAAAACAAGTTAATTAT+TGG - tig0025825:16469-16488 Msa1425120:intron 15.0%
!!! ATTATGATTTTACAACATTT+TGG - tig0025825:17025-17044 Msa1425120:CDS 15.0%
!! TTATTTGATATAACAACAAA+TGG + tig0025825:17570-17589 None:intergenic 15.0%
!! TGTTGTTATATCAAATAAAA+TGG - tig0025825:17572-17591 Msa1425120:CDS 15.0%
!! TATATCAAATAAAATGGTAT+TGG - tig0025825:17578-17597 Msa1425120:CDS 15.0%
!!! GTTAAAAAGTATTAGATAAA+AGG + tig0025825:18013-18032 None:intergenic 15.0%
!!! ATAATTTGTTCATACAATAT+TGG - tig0025825:18089-18108 Msa1425120:intron 15.0%
!!! TAATTTGTTCATACAATATT+GGG - tig0025825:18090-18109 Msa1425120:intron 15.0%
!! GATTTATTTAATAAATGACA+TGG - tig0025825:18466-18485 Msa1425120:intron 15.0%
!! TTATAATTTACAACAGTTAA+AGG + tig0025825:18574-18593 None:intergenic 15.0%
!! ACATAATGATTTGATATTTA+TGG - tig0025825:18689-18708 Msa1425120:intron 15.0%
!! ATACTTCAATAGTAAAATTA+TGG - tig0025825:18849-18868 Msa1425120:intron 15.0%
!!! AATTTTAAATACTTTGTATG+AGG + tig0025825:19589-19608 None:intergenic 15.0%
!!! TCATACAAAGTATTTAAAAT+TGG - tig0025825:19588-19607 Msa1425120:intron 15.0%
!! AAGTCAAGAAAATAAATAAA+TGG - tig0025825:19982-20001 Msa1425120:CDS 15.0%
!!! ATTTGTAAAATATTGACTTT+TGG - tig0025825:21312-21331 Msa1425120:intron 15.0%
!!! TCATGTATATTGTTATTTTA+GGG - tig0025825:22557-22576 Msa1425120:intron 15.0%
!! AATACATGAAATAAGTAATT+TGG + tig0025825:22964-22983 None:intergenic 15.0%
!!! TTTTTTTTTTAATGATCTGG+AGG - tig0025825:16021-16040 Msa1425120:CDS 20.0%
!!! ATGAATTGAATTGGTTTAAA+GGG - tig0025825:16073-16092 Msa1425120:CDS 20.0%
!! TCTGAAAATTATATTTCTTC+GGG + tig0025825:16302-16321 Msa1425110:intron 20.0%
!!! TCAAAGAAACTTTATTTTTG+TGG - tig0025825:16369-16388 Msa1425120:intron 20.0%
!!! AGGTTATTCAATTTTTTTCT+TGG + tig0025825:16551-16570 Msa1425110:intron 20.0%
!! AGAAAAAAATTGAATAACCT+TGG - tig0025825:16551-16570 Msa1425120:intron 20.0%
!! TAAAACAGCAAAAAATGAAA+AGG + tig0025825:16691-16710 Msa1425110:intron 20.0%
!! TTAACTGAAAATTCATCAAT+AGG + tig0025825:16909-16928 Msa1425110:intron 20.0%
!!! TTTTCTCCAAAAAATGTTTT+TGG - tig0025825:16968-16987 Msa1425120:intron 20.0%
!!! TAACATCCAAAAACATTTTT+TGG + tig0025825:16977-16996 Msa1425110:intron 20.0%
!!! AAAAAATGTTTTTGGATGTT+AGG - tig0025825:16976-16995 Msa1425120:intron 20.0%
!!! AAAAATGTTTTTGGATGTTA+GGG - tig0025825:16977-16996 Msa1425120:intron 20.0%
!! TTAACAAGAAATTAGTCAAA+TGG + tig0025825:17202-17221 Msa1425110:intron 20.0%
!! TCTTGTTAAAATTATAATGC+AGG - tig0025825:17213-17232 Msa1425120:intron 20.0%
!! CCAATAATAAGTTATAAGAA+TGG + tig0025825:17320-17339 Msa1425110:three_prime_UTR 20.0%
!! CCATTCTTATAACTTATTAT+TGG - tig0025825:17317-17336 Msa1425120:CDS 20.0%
!! GTTCTTTATTCTCATAATAT+TGG + tig0025825:17799-17818 None:intergenic 20.0%
!! GCAAAATTATGAAATTAGAT+TGG - tig0025825:18488-18507 Msa1425120:intron 20.0%
!! TATATATTGTTGTATACTCT+TGG - tig0025825:18914-18933 Msa1425120:intron 20.0%
!!! TTTTTCTTTGTTGAATAAAC+CGG + tig0025825:19231-19250 None:intergenic 20.0%
!!! AGTTTTGAATTTAAACACTT+TGG - tig0025825:19441-19460 Msa1425120:intron 20.0%
!!! GTTTTGAATTTAAACACTTT+GGG - tig0025825:19442-19461 Msa1425120:intron 20.0%
!!! ATTCCTTTTTTTATTTGATG+CGG - tig0025825:19629-19648 Msa1425120:intron 20.0%
!!! GATTTTCATTGATTTTGAAA+AGG - tig0025825:19704-19723 Msa1425120:intron 20.0%
!! AACTGATAAATCTTTAGTTA+CGG + tig0025825:19853-19872 None:intergenic 20.0%
!! AAAGATTTATCAGTTTATCT+TGG - tig0025825:19858-19877 Msa1425120:intron 20.0%
!! GGTTCATCATAAAAAATAAT+GGG - tig0025825:20161-20180 Msa1425120:intron 20.0%
!! GTTCATCATAAAAAATAATG+GGG - tig0025825:20162-20181 Msa1425120:intron 20.0%
!! TTTGTTTCAGTTAACTTATA+TGG - tig0025825:20535-20554 Msa1425120:intron 20.0%
!! TAACATTAAAACTAGAATCA+TGG + tig0025825:21882-21901 None:intergenic 20.0%
!!! ATTTTGGAGTACTATTATAA+AGG - tig0025825:22437-22456 Msa1425120:intron 20.0%
!!! AAAACTTTCAGATTTTAAGT+CGG + tig0025825:22476-22495 None:intergenic 20.0%
!!! CTCATGTATATTGTTATTTT+AGG - tig0025825:22556-22575 Msa1425120:intron 20.0%
!!! TAATTTTGATATACTGTCGA+TGG - tig0025825:15912-15931 Msa1425120:CDS 25.0%
!! TGGAAAAGTTTTTACATTGT+CGG - tig0025825:15932-15951 Msa1425120:CDS 25.0%
!! TGTGTTTTCATGAATTGAAT+TGG - tig0025825:16064-16083 Msa1425120:CDS 25.0%
!! CATGAATTGAATTGGTTTAA+AGG - tig0025825:16072-16091 Msa1425120:CDS 25.0%
! TTTGATGTTGAATTGTTCTT+TGG - tig0025825:16100-16119 Msa1425120:CDS 25.0%
! CACAAGACAGAAAAAAATTA+GGG + tig0025825:16247-16266 Msa1425110:intron 25.0%
! ACACAAGACAGAAAAAAATT+AGG + tig0025825:16248-16267 Msa1425110:intron 25.0%
!!! AAACTTTATTTTTGTGGAGA+GGG - tig0025825:16375-16394 Msa1425120:intron 25.0%
! GTTGCTGAATAAGTTTATTT+CGG - tig0025825:16514-16533 Msa1425120:intron 25.0%
!!! AAGCTTTTAGTTTTTTCGTT+TGG - tig0025825:16616-16635 Msa1425120:intron 25.0%
!!! TTTTAGTTTTTTCGTTTGGA+GGG - tig0025825:16620-16639 Msa1425120:intron 25.0%
!!! ACATTGTTATTTTCTAGAAG+CGG - tig0025825:16741-16760 Msa1425120:intron 25.0%
! AAATTAGTCAAATGGTAGAT+GGG + tig0025825:17194-17213 Msa1425110:intron 25.0%
! TGTTAAAATTATAATGCAGG+CGG - tig0025825:17216-17235 Msa1425120:intron 25.0%
! AAAAAATAGTTTATGCACCA+AGG + tig0025825:17430-17449 None:intergenic 25.0%
!!! ATTTTGATCAAAGCAAGTTT+AGG - tig0025825:17637-17656 Msa1425120:intron 25.0%
! AGAAATAAATGAACCATACA+TGG - tig0025825:17743-17762 Msa1425120:intron 25.0%
! TTAGATAAAAGGATATTGCA+TGG + tig0025825:18002-18021 None:intergenic 25.0%
! AAATTAGAAACTCATGCAAA+AGG + tig0025825:18066-18085 None:intergenic 25.0%
! GAAAAGAAACATGAGTTTAA+AGG + tig0025825:18552-18571 None:intergenic 25.0%
! ATTTAGTCATGCTAATGAAA+GGG + tig0025825:18632-18651 None:intergenic 25.0%
! TATTTAGTCATGCTAATGAA+AGG + tig0025825:18633-18652 None:intergenic 25.0%
!!! CTAGTTTTAAACGTCAATAT+TGG - tig0025825:18656-18675 Msa1425120:intron 25.0%
!!! AATGCATTTTGATATCATCA+CGG + tig0025825:18749-18768 None:intergenic 25.0%
! TGATGATATCAAAATGCATT+TGG - tig0025825:18749-18768 Msa1425120:intron 25.0%
! GAAATTGTCTAAAGATTAAG+AGG - tig0025825:18871-18890 Msa1425120:intron 25.0%
! ACTATAGATTAGAGCAAATA+AGG + tig0025825:19003-19022 None:intergenic 25.0%
!! ATACAGTGGTTTTCTTTAAA+AGG - tig0025825:19728-19747 Msa1425120:intron 25.0%
! ACTGATAAATCTTTAGTTAC+GGG + tig0025825:19852-19871 None:intergenic 25.0%
!!! TATCAGTTTATCTTGGTTTT+AGG - tig0025825:19865-19884 Msa1425120:intron 25.0%
! TTACCTCAAATATCATGATT+TGG - tig0025825:20130-20149 Msa1425120:intron 25.0%
! TACCTCAAATATCATGATTT+GGG - tig0025825:20131-20150 Msa1425120:intron 25.0%
!!! TATTTTTTATGATGAACCCA+AGG + tig0025825:20159-20178 None:intergenic 25.0%
! GGGTTCATCATAAAAAATAA+TGG - tig0025825:20160-20179 Msa1425120:intron 25.0%
!! ATAAAAAATAATGGGGAGAT+AGG - tig0025825:20169-20188 Msa1425120:intron 25.0%
!! TAAAAAATAATGGGGAGATA+GGG - tig0025825:20170-20189 Msa1425120:intron 25.0%
! TAAACAGCAAATAAGAAGTA+TGG - tig0025825:20346-20365 Msa1425120:intron 25.0%
! AAGAAGACAACTAATTCATT+GGG + tig0025825:20502-20521 None:intergenic 25.0%
! TAAGAAGACAACTAATTCAT+TGG + tig0025825:20503-20522 None:intergenic 25.0%
! TAAGTTAACTGAAACAAAAG+AGG + tig0025825:20533-20552 None:intergenic 25.0%
! GTCATTTCATAATTCATGTT+CGG - tig0025825:20706-20725 Msa1425120:intron 25.0%
!!! CAAAATGAAGTTTTGGATAT+AGG + tig0025825:21344-21363 None:intergenic 25.0%
!! GGAAAATCAAAATGAAGTTT+TGG + tig0025825:21351-21370 None:intergenic 25.0%
! TGAGTTTGTGTTAAGTATAT+GGG - tig0025825:21584-21603 Msa1425120:intron 25.0%
! ATCTCAAAATTATCTTCAGA+TGG + tig0025825:21711-21730 None:intergenic 25.0%
!! ATTTGTATGATTTTCACACT+TGG - tig0025825:21828-21847 Msa1425120:intron 25.0%
!! ATTTTCACACTTGGTAAAAT+GGG - tig0025825:21837-21856 Msa1425120:CDS 25.0%
! GTTCTATCAAAAACCATATT+TGG - tig0025825:22009-22028 Msa1425120:intron 25.0%
! AACCATTAGAAAAGATTTAG+AGG + tig0025825:22049-22068 None:intergenic 25.0%
! CTTATGTAAGTGATAAATGT+TGG - tig0025825:22620-22639 Msa1425120:CDS 25.0%
! ACTTATTTCATGTATTTGAC+AGG - tig0025825:22968-22987 Msa1425120:intron 25.0%
TGATGATAGTAGTAGTGATA+GGG - tig0025825:15780-15799 Msa1425120:CDS 30.0%
GAAAGTTGCTAAGAAATTGA+AGG - tig0025825:16140-16159 Msa1425120:intron 30.0%
TTAAGATTGGAATCACCAAA+TGG + tig0025825:16201-16220 Msa1425110:intron 30.0%
GACTTACTTCTCATTAAGAT+TGG + tig0025825:16214-16233 Msa1425110:intron 30.0%
AAAAAATTAGGGAGAAGAGA+GGG + tig0025825:16236-16255 Msa1425110:intron 30.0%
AAAAAAATTAGGGAGAAGAG+AGG + tig0025825:16237-16256 Msa1425110:intron 30.0%
!!! GAAACTTTATTTTTGTGGAG+AGG - tig0025825:16374-16393 Msa1425120:intron 30.0%
AATGATTAATACTCGTTCCA+AGG + tig0025825:16571-16590 Msa1425110:intron 30.0%
ATCATTGAAGTTCATGATGT+TGG - tig0025825:16585-16604 Msa1425120:intron 30.0%
!!! CTTTTAGTTTTTTCGTTTGG+AGG - tig0025825:16619-16638 Msa1425120:intron 30.0%
CAATAAATTTGCAAGCTTAG+CGG + tig0025825:16721-16740 Msa1425110:intron 30.0%
GTTCGTAAATAAGATGATGA+AGG + tig0025825:16827-16846 Msa1425110:intron 30.0%
! TTTACGAACATGCTATTTGT+AGG - tig0025825:16838-16857 Msa1425120:intron 30.0%
! ATGCTATTTGTAGGTTTGTT+TGG - tig0025825:16847-16866 Msa1425120:intron 30.0%
ATCATCATAATCAATAACCC+GGG + tig0025825:17146-17165 Msa1425110:intron 30.0%
CATCATCATAATCAATAACC+CGG + tig0025825:17147-17166 Msa1425110:intron 30.0%
GAAATTAGTCAAATGGTAGA+TGG + tig0025825:17195-17214 Msa1425110:intron 30.0%
GATCATAAAAGAATATAGCC+AGG + tig0025825:17390-17409 None:intergenic 30.0%
TTATACAAATTGTCTCTCAC+AGG - tig0025825:17461-17480 Msa1425120:intron 30.0%
TGTTTGGTAAGGATATCAAT+TGG + tig0025825:17696-17715 None:intergenic 30.0%
TGGTCTTCAAGGTTAATATT+TGG - tig0025825:17763-17782 Msa1425120:CDS 30.0%
GCTAAAAGATGCAATTTGAT+TGG + tig0025825:17859-17878 None:intergenic 30.0%
TCTGAGTAGAAAAGTTGAAA+TGG + tig0025825:17923-17942 None:intergenic 30.0%
CTTTCTATCTTTAACTCACT+CGG + tig0025825:18385-18404 None:intergenic 30.0%
!! GTTTTAAACGTCAATATTGG+TGG - tig0025825:18659-18678 Msa1425120:intron 30.0%
TGATTTGATATTTATGGTGC+AGG - tig0025825:18695-18714 Msa1425120:intron 30.0%
GATTTGATATTTATGGTGCA+GGG - tig0025825:18696-18715 Msa1425120:intron 30.0%
TGTTGTATACTCTTGGAATT+TGG - tig0025825:18921-18940 Msa1425120:intron 30.0%
GTTGTATACTCTTGGAATTT+GGG - tig0025825:18922-18941 Msa1425120:intron 30.0%
! TAATCTATAGTTGATGTCTC+AGG - tig0025825:19012-19031 Msa1425120:intron 30.0%
ACATGGTATAACTAAGATTG+AGG - tig0025825:19123-19142 Msa1425120:intron 30.0%
!! TAGATCACAGGTTTGTTATT+GGG + tig0025825:19149-19168 None:intergenic 30.0%
! CTAAAGCTCTAATTCTAAGA+TGG + tig0025825:19187-19206 None:intergenic 30.0%
CATCTTAGAATTAGAGCTTT+AGG - tig0025825:19185-19204 Msa1425120:intron 30.0%
AAAGAAAAACCTCACAAAAC+TGG - tig0025825:19242-19261 Msa1425120:intron 30.0%
ATGCATAGATGATATTGTAC+TGG + tig0025825:19522-19541 None:intergenic 30.0%
ACACCGCATCAAATAAAAAA+AGG + tig0025825:19635-19654 None:intergenic 30.0%
GAAGACTAATGTAGTGATAT+TGG - tig0025825:19658-19677 Msa1425120:intron 30.0%
GTGATATTGGAGAAATCAAA+AGG - tig0025825:19671-19690 Msa1425120:intron 30.0%
TTAATGCTACGAAACCATAT+GGG - tig0025825:19811-19830 Msa1425120:intron 30.0%
! TAAGCAAAAAGCATGAACAA+TGG + tig0025825:19942-19961 None:intergenic 30.0%
!! CATGCTTTTTGCTTATGATT+TGG - tig0025825:19947-19966 Msa1425120:intron 30.0%
!! TTTGCTTATGATTTGGTCAT+TGG - tig0025825:19954-19973 Msa1425120:intron 30.0%
ATACAAACCATGGAAATGTA+TGG - tig0025825:20021-20040 Msa1425120:CDS 30.0%
CTTAAAACCATACATTTCCA+TGG + tig0025825:20031-20050 None:intergenic 30.0%
TACCCAAATCATGATATTTG+AGG + tig0025825:20136-20155 None:intergenic 30.0%
TTAACTTATATGGCCATTGT+GGG - tig0025825:20545-20564 Msa1425120:intron 30.0%
! TATCCGGTCTCAAATATTTT+AGG - tig0025825:20584-20603 Msa1425120:intron 30.0%
! GAACCTAAAATATTTGAGAC+CGG + tig0025825:20590-20609 None:intergenic 30.0%
!! TTACCTTGGCTTTATATATG+CGG + tig0025825:21032-21051 None:intergenic 30.0%
TAATGTTAGAGAGATTACCT+TGG + tig0025825:21046-21065 None:intergenic 30.0%
TGTTACATGCCATAACTTAA+TGG - tig0025825:21095-21114 Msa1425120:intron 30.0%
AAAGTGATCTCTTTGCATAT+TGG + tig0025825:21392-21411 None:intergenic 30.0%
GTGAGTTTGTGTTAAGTATA+TGG - tig0025825:21583-21602 Msa1425120:intron 30.0%
! GATTTTCACACTTGGTAAAA+TGG - tig0025825:21836-21855 Msa1425120:CDS 30.0%
! TGGTTTTTGATAGAACACTA+TGG + tig0025825:22005-22024 None:intergenic 30.0%
! GACCTCTAAATCTTTTCTAA+TGG - tig0025825:22044-22063 Msa1425120:intron 30.0%
! TTTTCTAATGGTTTCTCGAA+TGG - tig0025825:22056-22075 Msa1425120:intron 30.0%
TGTAAGAAGAGTAGATCAAA+TGG + tig0025825:22124-22143 None:intergenic 30.0%
TTGATCTACTCTTCTTACAA+CGG - tig0025825:22125-22144 Msa1425120:intron 30.0%
GAAAATAAGCTTAGATGGTT+TGG + tig0025825:22177-22196 None:intergenic 30.0%
TGGTAGAAAATAAGCTTAGA+TGG + tig0025825:22182-22201 None:intergenic 30.0%
! TCTACCAACTTTTCTACTAT+AGG - tig0025825:22195-22214 Msa1425120:intron 30.0%
! TATTTTCCATGTAGTATGAC+TGG + tig0025825:22373-22392 None:intergenic 30.0%
! AGTACAAAGTTCAGAGATTT+TGG - tig0025825:22421-22440 Msa1425120:intron 30.0%
! TTGGAGTACTATTATAAAGG+AGG - tig0025825:22440-22459 Msa1425120:intron 30.0%
AGTACTATTATAAAGGAGGT+GGG - tig0025825:22444-22463 Msa1425120:intron 30.0%
! TTGAAATACTTTGGTTTCCT+GGG + tig0025825:22678-22697 None:intergenic 30.0%
TGTAAGTCTATTGTTCATGA+TGG - tig0025825:22914-22933 Msa1425120:intron 30.0%
CTGATGATAGTAGTAGTGAT+AGG - tig0025825:15779-15798 Msa1425120:CDS 35.0%
! CTCTTCAGTAATTTTCCTTG+AGG + tig0025825:15824-15843 Msa1425110:intron 35.0%
CTCAAGGAAAATTACTGAAG+AGG - tig0025825:15822-15841 Msa1425120:intron 35.0%
AGAGGAAATAGCTCAGTATT+TGG - tig0025825:15840-15859 Msa1425120:intron 35.0%
!!! TGTTCTTTGGTTTTGTGTTC+AGG - tig0025825:16113-16132 Msa1425120:CDS 35.0%
TCAAATGACTCGAATCCATT+TGG - tig0025825:16183-16202 Msa1425120:intron 35.0%
TTATTCAGCAACCAGCAATA+GGG + tig0025825:16506-16525 Msa1425110:intron 35.0%
GCTGAATAAGTTTATTTCGG+TGG - tig0025825:16517-16536 Msa1425120:intron 35.0%
AGAAAAAGAGACAGAGAGAA+AGG - tig0025825:16934-16953 Msa1425120:intron 35.0%
!! ACAAAACAACTAGTTGGTAG+TGG + tig0025825:17065-17084 Msa1425110:three_prime_UTR 35.0%
!! CTACCAACTAGTTGTTTTGT+TGG - tig0025825:17065-17084 Msa1425120:CDS 35.0%
ATGCCAACAAAACAACTAGT+TGG + tig0025825:17071-17090 Msa1425110:three_prime_UTR 35.0%
TCATCATAATCAATAACCCG+GGG + tig0025825:17145-17164 Msa1425110:intron 35.0%
TGAAAAAACGAAGAGAAGAG+AGG - tig0025825:17251-17270 Msa1425120:CDS 35.0%
GAAAAAACGAAGAGAAGAGA+GGG - tig0025825:17252-17271 Msa1425120:CDS 35.0%
TAGAAGCGAAATTACGTTCT+GGG - tig0025825:17355-17374 Msa1425120:CDS 35.0%
TAGTTTATGCACCAAGGTTT+GGG + tig0025825:17424-17443 None:intergenic 35.0%
ATAGTTTATGCACCAAGGTT+TGG + tig0025825:17425-17444 None:intergenic 35.0%
AAAAAAGAGAAGTGGAGGTA+TGG - tig0025825:17529-17548 Msa1425120:CDS 35.0%
! TCTGAAATTAGATTGCGTGA+AGG - tig0025825:17660-17679 Msa1425120:intron 35.0%
ATCCTTACCAAACATCTTGA+TGG - tig0025825:17702-17721 Msa1425120:intron 35.0%
TTAACCTTGAAGACCATGTA+TGG + tig0025825:17759-17778 None:intergenic 35.0%
!! TTGGATGACACTCTAAAGTT+AGG + tig0025825:17840-17859 None:intergenic 35.0%
! CAACTTTTCTACTCAGATCA+TGG - tig0025825:17926-17945 Msa1425120:CDS 35.0%
!!! GTGAATGCATCTACTTTTTC+TGG - tig0025825:18112-18131 Msa1425120:intron 35.0%
TTCATGGTTGTTGATGTTAG+AGG + tig0025825:18152-18171 None:intergenic 35.0%
TCTAACATCAACAACCATGA+AGG - tig0025825:18151-18170 Msa1425120:intron 35.0%
TTGGAAAGCAGTGAAGAAAA+CGG + tig0025825:18349-18368 None:intergenic 35.0%
! TCAATCTGGTTTGTATAGAG+AGG - tig0025825:18421-18440 Msa1425120:intron 35.0%
! CAATCTGGTTTGTATAGAGA+GGG - tig0025825:18422-18441 Msa1425120:intron 35.0%
! AATCTGGTTTGTATAGAGAG+GGG - tig0025825:18423-18442 Msa1425120:intron 35.0%
AAATGCATTTGGACTTTGAC+AGG - tig0025825:18760-18779 Msa1425120:intron 35.0%
AATGCATTTGGACTTTGACA+GGG - tig0025825:18761-18780 Msa1425120:intron 35.0%
TACCTCCCAATATTCTACAT+GGG + tig0025825:18796-18815 None:intergenic 35.0%
ATACCTCCCAATATTCTACA+TGG + tig0025825:18797-18816 None:intergenic 35.0%
ACTAAACAAGCCATGGAAAA+AGG + tig0025825:18823-18842 None:intergenic 35.0%
TGATGTAACTAAACAAGCCA+TGG + tig0025825:18830-18849 None:intergenic 35.0%
!!! TGGTTTTGTAGGGTTGAATT+AGG + tig0025825:18955-18974 None:intergenic 35.0%
!!! CCTTAGAAGTTGGTTTTGTA+GGG + tig0025825:18965-18984 None:intergenic 35.0%
!!! ACCTTAGAAGTTGGTTTTGT+AGG + tig0025825:18966-18985 None:intergenic 35.0%
ATCTAATACGTGGAGTAATG+TGG - tig0025825:19042-19061 Msa1425120:intron 35.0%
TCTAATACGTGGAGTAATGT+GGG - tig0025825:19043-19062 Msa1425120:intron 35.0%
!! CTAGATCACAGGTTTGTTAT+TGG + tig0025825:19150-19169 None:intergenic 35.0%
CAATAACAAACCTGTGATCT+AGG - tig0025825:19148-19167 Msa1425120:intron 35.0%
! AAACACTTTGGGAATAGCAT+TGG - tig0025825:19453-19472 Msa1425120:intron 35.0%
!! GATTTTGAAAAGGCATACAG+TGG - tig0025825:19714-19733 Msa1425120:intron 35.0%
!! AGTACTCTGAGATATATGTG+AGG - tig0025825:19779-19798 Msa1425120:intron 35.0%
!! GTACTCTGAGATATATGTGA+GGG - tig0025825:19780-19799 Msa1425120:intron 35.0%
!! TACTCTGAGATATATGTGAG+GGG - tig0025825:19781-19800 Msa1425120:intron 35.0%
GTTAATGCTACGAAACCATA+TGG - tig0025825:19810-19829 Msa1425120:intron 35.0%
TAATGCTACGAAACCATATG+GGG - tig0025825:19812-19831 Msa1425120:intron 35.0%
! AAATCTTTTGTAGCCCCATA+TGG + tig0025825:19828-19847 None:intergenic 35.0%
AACCAGGATAAAACGATAAG+CGG + tig0025825:19898-19917 None:intergenic 35.0%
AGAGACATGAATACAAACCA+TGG - tig0025825:20011-20030 Msa1425120:CDS 35.0%
CAAAGATCAGAGACAGAAAT+TGG - tig0025825:20097-20116 Msa1425120:intron 35.0%
! ATATCATGATTTGGGTACCT+TGG - tig0025825:20139-20158 Msa1425120:intron 35.0%
! TATCATGATTTGGGTACCTT+GGG - tig0025825:20140-20159 Msa1425120:intron 35.0%
GTAAACTGTAGGATACAACT+AGG - tig0025825:20197-20216 Msa1425120:intron 35.0%
ACATTCAACCCTATATAGCA+TGG + tig0025825:20319-20338 None:intergenic 35.0%
TGCTATATAGGGTTGAATGT+TGG - tig0025825:20319-20338 Msa1425120:intron 35.0%
GCTATATAGGGTTGAATGTT+GGG - tig0025825:20320-20339 Msa1425120:intron 35.0%
! AAGAAGTATGGTCAATGTTG+TGG - tig0025825:20358-20377 Msa1425120:intron 35.0%
GTTAACTTATATGGCCATTG+TGG - tig0025825:20544-20563 Msa1425120:intron 35.0%
TTGCTTCCTTAACATGTATC+CGG - tig0025825:20568-20587 Msa1425120:intron 35.0%
GCGAACAATCCATTAAGTTA+TGG + tig0025825:21107-21126 None:intergenic 35.0%
! TCCATTATTTGCTGCAATAC+AGG - tig0025825:21127-21146 Msa1425120:intron 35.0%
! TGCAATACAGGCTTGTTTAA+AGG - tig0025825:21139-21158 Msa1425120:intron 35.0%
! CAAATGCTTGCGTAACATTT+TGG + tig0025825:21174-21193 None:intergenic 35.0%
AATTTATCTTCACCCTCTGA+TGG + tig0025825:21212-21231 None:intergenic 35.0%
ATCAGAGGGTGAAGATAAAT+TGG - tig0025825:21211-21230 Msa1425120:CDS 35.0%
TGCTCATGTTATGAAATCTG+AGG - tig0025825:21238-21257 Msa1425120:CDS 35.0%
TCATGTTATGAAATCTGAGG+AGG - tig0025825:21241-21260 Msa1425120:CDS 35.0%
TGGACTGCACAAAAAATATC+AGG + tig0025825:21372-21391 None:intergenic 35.0%
! ATGAAACAGTTCTGGTGAAA+AGG + tig0025825:21472-21491 None:intergenic 35.0%
! TTTTCACCAGAACTGTTTCA+TGG - tig0025825:21471-21490 Msa1425120:intron 35.0%
! GTTTCATGGTGATGAAAATG+AGG - tig0025825:21485-21504 Msa1425120:intron 35.0%
AAATTATCTTCAGATGGAGC+AGG + tig0025825:21705-21724 None:intergenic 35.0%
!!! TTTTGAGATGAAAGCCATGA+AGG - tig0025825:21722-21741 Msa1425120:intron 35.0%
GAAGAAGGAGATGTAATGTT+TGG - tig0025825:21759-21778 Msa1425120:intron 35.0%
AGAAGTAAATCTGGATTCAC+AGG - tig0025825:21791-21810 Msa1425120:intron 35.0%
! CAATGAGTTGGATCCAAATA+TGG + tig0025825:22025-22044 None:intergenic 35.0%
AGATTTAGAGGTCAATGAGT+TGG + tig0025825:22037-22056 None:intergenic 35.0%
! GTTTCTCGAATGGTTTTCTT+AGG - tig0025825:22066-22085 Msa1425120:intron 35.0%
AAGAAGAGTAGATCAAATGG+AGG + tig0025825:22121-22140 None:intergenic 35.0%
AGCACCTATAGTAGAAAAGT+TGG + tig0025825:22202-22221 None:intergenic 35.0%
AGACTAGACAAGATAGGATT+AGG + tig0025825:22254-22273 None:intergenic 35.0%
ACTGGCAATGTTGTATGATA+CGG + tig0025825:22355-22374 None:intergenic 35.0%
GAGTACTATTATAAAGGAGG+TGG - tig0025825:22443-22462 Msa1425120:intron 35.0%
GTACTATTATAAAGGAGGTG+GGG - tig0025825:22445-22464 Msa1425120:intron 35.0%
TACTATTATAAAGGAGGTGG+GGG - tig0025825:22446-22465 Msa1425120:intron 35.0%
! GTTGAAATACTTTGGTTTCC+TGG + tig0025825:22679-22698 None:intergenic 35.0%
TGAACACGGTTGAAATACTT+TGG + tig0025825:22687-22706 None:intergenic 35.0%
TATTTCAACCGTGTTCATAC+TGG - tig0025825:22690-22709 Msa1425120:intron 35.0%
ACTCATATCCAGTATGAACA+CGG + tig0025825:22701-22720 None:intergenic 35.0%
TTATACCCTTGTACAACCTT+TGG + tig0025825:22768-22787 None:intergenic 35.0%
TCCAACTTACACTATTGAGA+AGG - tig0025825:22830-22849 Msa1425120:intron 35.0%
TCCTTCTCAATAGTGTAAGT+TGG + tig0025825:22834-22853 None:intergenic 35.0%
ACTTACACTATTGAGAAGGA+TGG - tig0025825:22834-22853 Msa1425120:intron 35.0%
AGACTTACAATGTCTTCGTA+TGG + tig0025825:22903-22922 None:intergenic 35.0%
TCCGCATTGTAAACAAAGAA+TGG - tig0025825:22994-23013 Msa1425120:CDS 35.0%
! CCCATTCTTTGTTTACAATG+CGG + tig0025825:22998-23017 None:intergenic 35.0%
CCGCATTGTAAACAAAGAAT+GGG - tig0025825:22995-23014 Msa1425120:CDS 35.0%
TGGGAATATTCTCACAAGAA+AGG - tig0025825:23014-23033 Msa1425120:CDS 35.0%
TTTAAGTGCACATTTGAACG+TGG - tig0025825:23038-23057 Msa1425120:CDS 35.0%
GATAGTAGTAGTGATAGGGA+TGG - tig0025825:15784-15803 Msa1425120:intron 40.0%
AGCTCAGTATTTGGCGAAAA+AGG - tig0025825:15849-15868 Msa1425120:intron 40.0%
ATGCATGCATACTGCATATG+AGG + tig0025825:16337-16356 Msa1425110:intron 40.0%
!! TATTTTTGTGGAGAGGGTAG+TGG - tig0025825:16381-16400 Msa1425120:intron 40.0%
CTTATTCAGCAACCAGCAAT+AGG + tig0025825:16507-16526 Msa1425110:intron 40.0%
!!! TAGTTTTTTCGTTTGGAGGG+TGG - tig0025825:16623-16642 Msa1425120:intron 40.0%
!!! AGTTTTTTCGTTTGGAGGGT+GGG - tig0025825:16624-16643 Msa1425120:intron 40.0%
ATTGAGCGTGATGTTGTTCA+AGG - tig0025825:16879-16898 Msa1425120:intron 40.0%
AAAGAGACAGAGAGAAAGGA+TGG - tig0025825:16938-16957 Msa1425120:intron 40.0%
!! AGTTGTTTTGTTGGCATGAC+TGG - tig0025825:17074-17093 Msa1425120:CDS 40.0%
CATCATAATCAATAACCCGG+GGG + tig0025825:17144-17163 Msa1425110:intron 40.0%
AATGCAGGCGGAAATTGAAA+AGG - tig0025825:17228-17247 Msa1425120:intron 40.0%
CTAGAAGCGAAATTACGTTC+TGG - tig0025825:17354-17373 Msa1425120:CDS 40.0%
AAAGAATATAGCCAGGCAGA+TGG + tig0025825:17383-17402 None:intergenic 40.0%
GGTAAGGATATCAATTGGCT+TGG + tig0025825:17691-17710 None:intergenic 40.0%
AGCCATCAAGATGTTTGGTA+AGG + tig0025825:17707-17726 None:intergenic 40.0%
ATCAGAGCCATCAAGATGTT+TGG + tig0025825:17712-17731 None:intergenic 40.0%
!! TCTTGATGGCTCTGATGATT+TGG - tig0025825:17716-17735 Msa1425120:intron 40.0%
TGAACCATACATGGTCTTCA+AGG - tig0025825:17752-17771 Msa1425120:CDS 40.0%
AGGATATTGCATGGAGAAGA+TGG + tig0025825:17993-18012 None:intergenic 40.0%
AGTGACAGAAATTGTGGTCA+TGG + tig0025825:18247-18266 None:intergenic 40.0%
TGGAAAGCAGTGAAGAAAAC+GGG + tig0025825:18348-18367 None:intergenic 40.0%
AGATAGAAAGTTGCAGCAGA+TGG - tig0025825:18395-18414 Msa1425120:intron 40.0%
! ATCTGGTTTGTATAGAGAGG+GGG - tig0025825:18424-18443 Msa1425120:intron 40.0%
GCCAACCCATGTAGAATATT+GGG - tig0025825:18788-18807 Msa1425120:intron 40.0%
TCCCAATATTCTACATGGGT+TGG + tig0025825:18792-18811 None:intergenic 40.0%
AACCCATGTAGAATATTGGG+AGG - tig0025825:18791-18810 Msa1425120:intron 40.0%
!! GAGGTATCTTCCTTTTTCCA+TGG - tig0025825:18810-18829 Msa1425120:intron 40.0%
CCCTACAAAACCAACTTCTA+AGG - tig0025825:18962-18981 Msa1425120:intron 40.0%
!! CAAAACCAACTTCTAAGGTG+AGG - tig0025825:18967-18986 Msa1425120:intron 40.0%
! TCTATAGTTGATGTCTCAGG+TGG - tig0025825:19015-19034 Msa1425120:intron 40.0%
! CTATAGTTGATGTCTCAGGT+GGG - tig0025825:19016-19035 Msa1425120:intron 40.0%
AGTAATGTGGGTGGAATACA+TGG - tig0025825:19055-19074 Msa1425120:intron 40.0%
ATAGCGTGAACATTTGCACA+TGG - tig0025825:19106-19125 Msa1425120:intron 40.0%
AACAAACCTGTGATCTAGGA+TGG - tig0025825:19152-19171 Msa1425120:intron 40.0%
!! TTGAATAAACCGGTTTTGCG+AGG + tig0025825:19221-19240 None:intergenic 40.0%
!! AAAACTGGCTTGTAAGGTGA+GGG - tig0025825:19257-19276 Msa1425120:intron 40.0%
ACTAGAGACTAGTGCTTACA+AGG + tig0025825:19298-19317 None:intergenic 40.0%
CTAAGGCAGGTGGAATAATA+GGG - tig0025825:19382-19401 Msa1425120:intron 40.0%
!! ACTCTGAGATATATGTGAGG+GGG - tig0025825:19782-19801 Msa1425120:intron 40.0%
! TACCGCTTATCGTTTTATCC+TGG - tig0025825:19893-19912 Msa1425120:intron 40.0%
!! TCTCTAGGATATGCAAAACC+AGG + tig0025825:19914-19933 None:intergenic 40.0%
GTGTACCAACACTTAGTAGA+AGG - tig0025825:20070-20089 Msa1425120:intron 40.0%
GATAGGGAGATGTAAACTGT+AGG - tig0025825:20186-20205 Msa1425120:intron 40.0%
AACTGTAGGATACAACTAGG+AGG - tig0025825:20200-20219 Msa1425120:intron 40.0%
ACTGTAGGATACAACTAGGA+GGG - tig0025825:20201-20220 Msa1425120:intron 40.0%
AACTAGGAGGGTGAGTTAAT+CGG - tig0025825:20213-20232 Msa1425120:intron 40.0%
! AGTTAATCGGAGAGTTGGTT+TGG - tig0025825:20226-20245 Msa1425120:intron 40.0%
! GTTAATCGGAGAGTTGGTTT+GGG - tig0025825:20227-20246 Msa1425120:intron 40.0%
!! GGCTGGTCTTATGCTTTAAA+GGG + tig0025825:20298-20317 None:intergenic 40.0%
!! TGGCTGGTCTTATGCTTTAA+AGG + tig0025825:20299-20318 None:intergenic 40.0%
TAAGACCAGCCATGCTATAT+AGG - tig0025825:20307-20326 Msa1425120:intron 40.0%
AAGACCAGCCATGCTATATA+GGG - tig0025825:20308-20327 Msa1425120:intron 40.0%
AAGTATGGTCAATGTTGTGG+AGG - tig0025825:20361-20380 Msa1425120:intron 40.0%
TTGAGACCGGATACATGTTA+AGG + tig0025825:20577-20596 None:intergenic 40.0%
GTTCGGAGTTGAAAATCTCT+TGG - tig0025825:20723-20742 Msa1425120:intron 40.0%
CTTGGTCAATATCTTCATGC+AGG - tig0025825:20741-20760 Msa1425120:intron 40.0%
AAGATGCAATTGATCGAGCT+AGG - tig0025825:20809-20828 Msa1425120:intron 40.0%
AGATGCAATTGATCGAGCTA+GGG - tig0025825:20810-20829 Msa1425120:intron 40.0%
TGCAAAAGCTTCTTCACATC+TGG + tig0025825:20901-20920 None:intergenic 40.0%
! AGATGTGAAGAAGCTTTTGC+AGG - tig0025825:20900-20919 Msa1425120:intron 40.0%
! GATGTGAAGAAGCTTTTGCA+GGG - tig0025825:20901-20920 Msa1425120:intron 40.0%
! ATGTGAAGAAGCTTTTGCAG+GGG - tig0025825:20902-20921 Msa1425120:intron 40.0%
ATTGAGTCAGAAATGCGTAC+TGG - tig0025825:20961-20980 Msa1425120:intron 40.0%
!! AGCAAAGCTTGTTGAGTACT+GGG - tig0025825:20987-21006 Msa1425120:intron 40.0%
GCCTGTATTGCAGCAAATAA+TGG + tig0025825:21131-21150 None:intergenic 40.0%
GAAATCTGAGGAGGATATTG+AGG - tig0025825:21250-21269 Msa1425120:CDS 40.0%
TCTTGACCCTCTGCTTTAAT+GGG + tig0025825:21423-21442 None:intergenic 40.0%
TTCTTGACCCTCTGCTTTAA+TGG + tig0025825:21424-21443 None:intergenic 40.0%
ATTAAAGCAGAGGGTCAAGA+AGG - tig0025825:21423-21442 Msa1425120:intron 40.0%
AGAAGGTGAAGTAGAAGATG+AGG - tig0025825:21440-21459 Msa1425120:intron 40.0%
TCATCACCATGAAACAGTTC+TGG + tig0025825:21480-21499 None:intergenic 40.0%
TTCCTGTGAATGTACCATTG+TGG + tig0025825:21619-21638 None:intergenic 40.0%
ATGAAAGCCATGAAGGCTAT+GGG - tig0025825:21729-21748 Msa1425120:intron 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG + tig0025825:22096-22115 None:intergenic 40.0%
TCTTCTTACAACGGCATCTA+CGG - tig0025825:22134-22153 Msa1425120:intron 40.0%
GTGGTAAGACTAGACAAGAT+AGG + tig0025825:22260-22279 None:intergenic 40.0%
CGAGAGTAAAGTAAGTGTAG+CGG + tig0025825:22307-22326 None:intergenic 40.0%
CACTTACTTTACTCTCGTGT+TGG - tig0025825:22310-22329 Msa1425120:intron 40.0%
! GTTGTATGATACGGAGTGTT+GGG + tig0025825:22346-22365 None:intergenic 40.0%
TGTTGTATGATACGGAGTGT+TGG + tig0025825:22347-22366 None:intergenic 40.0%
ACATTGCCAGTCATACTACA+TGG - tig0025825:22364-22383 Msa1425120:intron 40.0%
TAAGTGATAAATGTTGGCGC+AGG - tig0025825:22626-22645 Msa1425120:CDS 40.0%
! ATTGGTGGCATGACAAATAC+AGG - tig0025825:22652-22671 Msa1425120:intron 40.0%
GTGTTCATACTGGATATGAG+TGG - tig0025825:22700-22719 Msa1425120:intron 40.0%
TGCATCATAAGATTCCATGC+AGG - tig0025825:22873-22892 Msa1425120:intron 40.0%
GCATCATAAGATTCCATGCA+GGG - tig0025825:22874-22893 Msa1425120:intron 40.0%
CTTACAATGTCTTCGTATGG+TGG + tig0025825:22900-22919 None:intergenic 40.0%
ATGATTCCGATAGAATCCGG+AGG - tig0025825:15683-15702 Msa1425120:CDS 45.0%
TATCCGAGTCCGATTCATGT+CGG + tig0025825:15750-15769 Msa1425110:three_prime_UTR 45.0%
GTAGTAGTGATAGGGATGGT+AGG - tig0025825:15788-15807 Msa1425120:intron 45.0%
GTAGGAAGAGAAAGTCCTCA+AGG - tig0025825:15806-15825 Msa1425120:intron 45.0%
TTGAAGGCTCATACTGTGTC+TGG - tig0025825:16156-16175 Msa1425120:intron 45.0%
TGGTAGGCACTAGGTAGTTA+TGG - tig0025825:16401-16420 Msa1425120:intron 45.0%
TTGAGATTCCTCCCTATTGC+TGG - tig0025825:16492-16511 Msa1425120:intron 45.0%
!! ACTAGTTGGTAGTGGCAAGT+TGG + tig0025825:17057-17076 Msa1425110:three_prime_UTR 45.0%
! ACTTGAGAAAGCACGACATG+AGG - tig0025825:17276-17295 Msa1425120:CDS 45.0%
AGCACGACATGAGGAAGAAA+TGG - tig0025825:17285-17304 Msa1425120:CDS 45.0%
TGCCAGTTATTCCCAAACCT+TGG - tig0025825:17410-17429 Msa1425120:intron 45.0%
CACCAAGGTTTGGGAATAAC+TGG + tig0025825:17415-17434 None:intergenic 45.0%
!!! CTTCTCTTTTTTCCCAGTCC+TGG + tig0025825:17521-17540 None:intergenic 45.0%
GGACTGGGAAAAAAGAGAAG+TGG - tig0025825:17521-17540 Msa1425120:CDS 45.0%
CTGGGAAAAAAGAGAAGTGG+AGG - tig0025825:17524-17543 Msa1425120:CDS 45.0%
!! AGATGGATTGATGCAGTCGT+GGG + tig0025825:17976-17995 None:intergenic 45.0%
!! AAGATGGATTGATGCAGTCG+TGG + tig0025825:17977-17996 None:intergenic 45.0%
ACAACCATGAAGGCAGTGTA+TGG - tig0025825:18161-18180 Msa1425120:intron 45.0%
!! TGTGGATTTTGGTGCGATGA+AGG + tig0025825:18220-18239 None:intergenic 45.0%
! GTCATGGCAGTTGTGGATTT+TGG + tig0025825:18231-18250 None:intergenic 45.0%
AATTGTGGTCATGGCAGTTG+TGG + tig0025825:18238-18257 None:intergenic 45.0%
TCGCTGAGTGACAGAAATTG+TGG + tig0025825:18253-18272 None:intergenic 45.0%
GTTTGTATAGAGAGGGGGAA+TGG - tig0025825:18429-18448 Msa1425120:intron 45.0%
GGGTTTGACAGTGAACGAAA+TGG - tig0025825:18716-18735 Msa1425120:intron 45.0%
!! ATATTCTACATGGGTTGGCG+TGG + tig0025825:18787-18806 None:intergenic 45.0%
CGCCAACCCATGTAGAATAT+TGG - tig0025825:18787-18806 Msa1425120:intron 45.0%
!! TTCTAAGGTGAGGACTGCTT+AGG - tig0025825:18977-18996 Msa1425120:intron 45.0%
AGGTGGGAACATCTAATACG+TGG - tig0025825:19032-19051 Msa1425120:intron 45.0%
AATACGTGGAGTAATGTGGG+TGG - tig0025825:19046-19065 Msa1425120:intron 45.0%
CGCTATAGATGTCCAGACAT+GGG + tig0025825:19092-19111 None:intergenic 45.0%
ACGCTATAGATGTCCAGACA+TGG + tig0025825:19093-19112 None:intergenic 45.0%
TAGAGTCCATCCTAGATCAC+AGG + tig0025825:19161-19180 None:intergenic 45.0%
!! CCTTACAAGCCAGTTTTGTG+AGG + tig0025825:19254-19273 None:intergenic 45.0%
!! CCTCACAAAACTGGCTTGTA+AGG - tig0025825:19251-19270 Msa1425120:intron 45.0%
!! CAAAACTGGCTTGTAAGGTG+AGG - tig0025825:19256-19275 Msa1425120:intron 45.0%
AGACTAGTGCTTACAAGGCT+TGG + tig0025825:19293-19312 None:intergenic 45.0%
GCTAAGGCAGGTGGAATAAT+AGG - tig0025825:19381-19400 Msa1425120:intron 45.0%
AGATATATGTGAGGGGGTCA+CGG - tig0025825:19788-19807 Msa1425120:intron 45.0%
TGAACAATGGCACTGTCTCT+AGG + tig0025825:19929-19948 None:intergenic 45.0%
GTGAGCCTTCTACTAAGTGT+TGG + tig0025825:20078-20097 None:intergenic 45.0%
TCAACCCTATATAGCATGGC+TGG + tig0025825:20315-20334 None:intergenic 45.0%
GTTAAGGAAGCAACCCACAA+TGG + tig0025825:20561-20580 None:intergenic 45.0%
ACTCCTTCTGGTGAGTGATT+GGG - tig0025825:20765-20784 Msa1425120:intron 45.0%
TGCAGAATTGGAAGCTTTGC+AGG - tig0025825:20933-20952 Msa1425120:intron 45.0%
!! CAGCAAAGCTTGTTGAGTAC+TGG - tig0025825:20986-21005 Msa1425120:intron 45.0%
!! CCTTGGCTTTATATATGCGG+AGG + tig0025825:21029-21048 None:intergenic 45.0%
CCTCCGCATATATAAAGCCA+AGG - tig0025825:21026-21045 Msa1425120:intron 45.0%
ACGCCTTAAGAAACCATCAG+AGG - tig0025825:21196-21215 Msa1425120:intron 45.0%
CGCCTTAAGAAACCATCAGA+GGG - tig0025825:21197-21216 Msa1425120:intron 45.0%
CACCCTCTGATGGTTTCTTA+AGG + tig0025825:21202-21221 None:intergenic 45.0%
!! ACCCTCTGCTTTAATGGGTT+CGG + tig0025825:21418-21437 None:intergenic 45.0%
GTGAAGTAGAAGATGAGGCT+GGG - tig0025825:21445-21464 Msa1425120:intron 45.0%
GGAAGCTATTGATCCTGAAG+AGG - tig0025825:21506-21525 Msa1425120:CDS 45.0%
! ATGGGCTAACTTGTCCACAA+TGG - tig0025825:21602-21621 Msa1425120:intron 45.0%
GTCCACAATGGTACATTCAC+AGG - tig0025825:21614-21633 Msa1425120:intron 45.0%
GAGACGAATTCAGGAAGCAA+TGG - tig0025825:21671-21690 Msa1425120:intron 45.0%
GATGAAAGCCATGAAGGCTA+TGG - tig0025825:21728-21747 Msa1425120:intron 45.0%
AATAGCTCCCATAGCCTTCA+TGG + tig0025825:21739-21758 None:intergenic 45.0%
GCTATGGGAGCTATTGAAGA+AGG - tig0025825:21744-21763 Msa1425120:intron 45.0%
! GGAGATGTAATGTTTGGCTC+TGG - tig0025825:21765-21784 Msa1425120:intron 45.0%
CTCTGGTGCAGAAGTAAATC+TGG - tig0025825:21782-21801 Msa1425120:intron 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - tig0025825:21955-21974 Msa1425120:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - tig0025825:21956-21975 Msa1425120:intron 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG + tig0025825:22102-22121 None:intergenic 45.0%
AGATCAAATGGAGGAGAGTC+AGG + tig0025825:22112-22131 None:intergenic 45.0%
CTTCTTACAACGGCATCTAC+GGG - tig0025825:22135-22154 Msa1425120:intron 45.0%
! AAGTAAGTGTAGCGGAGATG+AGG + tig0025825:22299-22318 None:intergenic 45.0%
AAATGTTGGCGCAGGTCTAT+TGG - tig0025825:22634-22653 Msa1425120:CDS 45.0%
TCATGACAATCCACCTCCAA+AGG - tig0025825:22749-22768 Msa1425120:intron 45.0%
CACCTCCAAAGGTTGTACAA+GGG - tig0025825:22760-22779 Msa1425120:intron 45.0%
TACCCTTGTACAACCTTTGG+AGG + tig0025825:22765-22784 None:intergenic 45.0%
GTGTCTTGTCTACAAGGTCT+GGG + tig0025825:22806-22825 None:intergenic 45.0%
TGTGTCTTGTCTACAAGGTC+TGG + tig0025825:22807-22826 None:intergenic 45.0%
GAGCTTGTGTCTTGTCTACA+AGG + tig0025825:22812-22831 None:intergenic 45.0%
ATTGAGAAGGATGGCAGCAA+TGG - tig0025825:22843-22862 Msa1425120:intron 45.0%
ACCACTCCTCCGGATTCTAT+CGG + tig0025825:15692-15711 Msa1425110:three_prime_UTR 50.0%
GGAGTGGTCACCATAGTGAT+CGG - tig0025825:15704-15723 Msa1425120:CDS 50.0%
! TTTGTGGAGAGGGTAGTGGT+AGG - tig0025825:16385-16404 Msa1425120:intron 50.0%
TTCAGCAACCAGCAATAGGG+AGG + tig0025825:16503-16522 Msa1425110:intron 50.0%
TAATCAATAACCCGGGGGCT+GGG + tig0025825:17139-17158 Msa1425110:three_prime_UTR 50.0%
ATAATCAATAACCCGGGGGC+TGG + tig0025825:17140-17159 Msa1425110:intron 50.0%
! TGGAGGTATGGCTGCTTGAA+TGG - tig0025825:17541-17560 Msa1425120:CDS 50.0%
GTTGCCATACACTGCCTTCA+TGG + tig0025825:18168-18187 None:intergenic 50.0%
AGTGAAGAAAACGGGTGAGG+TGG + tig0025825:18340-18359 None:intergenic 50.0%
AGCAGTGAAGAAAACGGGTG+AGG + tig0025825:18343-18362 None:intergenic 50.0%
CTGCTTTCCAACTGCAGTGA+TGG - tig0025825:18358-18377 Msa1425120:intron 50.0%
GCAGCAGATGGTGTTCAATC+TGG - tig0025825:18407-18426 Msa1425120:intron 50.0%
GCAGTCCTCACCTTAGAAGT+TGG + tig0025825:18975-18994 None:intergenic 50.0%
! CGGTTTTGCGAGGTTGAGTT+GGG + tig0025825:19211-19230 None:intergenic 50.0%
CCAACTCAACCTCGCAAAAC+CGG - tig0025825:19209-19228 Msa1425120:intron 50.0%
TGTAAGGTGAGGGTTGTCCA+AGG - tig0025825:19267-19286 Msa1425120:intron 50.0%
TCAAATCCTAAGCCTGAGGC+GGG + tig0025825:19347-19366 None:intergenic 50.0%
GTCAAATCCTAAGCCTGAGG+CGG + tig0025825:19348-19367 None:intergenic 50.0%
GGTGTCAAATCCTAAGCCTG+AGG + tig0025825:19351-19370 None:intergenic 50.0%
AGGATTTGACACCTGAAGCG+TGG - tig0025825:19358-19377 Msa1425120:intron 50.0%
GGATTTGACACCTGAAGCGT+GGG - tig0025825:19359-19378 Msa1425120:intron 50.0%
GGGTGAGTTAATCGGAGAGT+TGG - tig0025825:20221-20240 Msa1425120:intron 50.0%
CACTCCTTCTGGTGAGTGAT+TGG - tig0025825:20764-20783 Msa1425120:intron 50.0%
ACTCCCAATCACTCACCAGA+AGG + tig0025825:20771-20790 None:intergenic 50.0%
TCTCTGTTCAGCAAGCACCT+CGG + tig0025825:20857-20876 None:intergenic 50.0%
GGGGAAGACACATGCAGAAT+TGG - tig0025825:20921-20940 Msa1425120:intron 50.0%
TCCCGAACCCATTAAAGCAG+AGG - tig0025825:21413-21432 Msa1425120:intron 50.0%
!! CCCTCTGCTTTAATGGGTTC+GGG + tig0025825:21417-21436 None:intergenic 50.0%
CCCGAACCCATTAAAGCAGA+GGG - tig0025825:21414-21433 Msa1425120:intron 50.0%
GGTGAAGTAGAAGATGAGGC+TGG - tig0025825:21444-21463 Msa1425120:intron 50.0%
AGTAGAGCTCTGTCCTCTTC+AGG + tig0025825:21522-21541 None:intergenic 50.0%
TGAAGAGGACAGAGCTCTAC+TGG - tig0025825:21521-21540 Msa1425120:CDS 50.0%
AGAGCAGCAGAGACGAATTC+AGG - tig0025825:21662-21681 Msa1425120:intron 50.0%
CCACTTAGTGGGATAAGGCT+TGG + tig0025825:21957-21976 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - tig0025825:21954-21973 Msa1425120:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG - tig0025825:21960-21979 Msa1425120:intron 50.0%
ACACCATTCGAGAGAGAGTG+GGG + tig0025825:22227-22246 None:intergenic 50.0%
GACACCATTCGAGAGAGAGT+GGG + tig0025825:22228-22247 None:intergenic 50.0%
TGACACCATTCGAGAGAGAG+TGG + tig0025825:22229-22248 None:intergenic 50.0%
AGGATGTTGCGTTGGATGAG+TGG + tig0025825:22279-22298 None:intergenic 50.0%
!! GTATGATACGGAGTGTTGGG+CGG + tig0025825:22343-22362 None:intergenic 50.0%
! CCTTGTACAACCTTTGGAGG+TGG + tig0025825:22762-22781 None:intergenic 50.0%
CCACCTCCAAAGGTTGTACA+AGG - tig0025825:22759-22778 Msa1425120:intron 50.0%
TCCGATAGAATCCGGAGGAG+TGG - tig0025825:15688-15707 Msa1425120:CDS 55.0%
CACTATGGTGACCACTCCTC+CGG + tig0025825:15702-15721 Msa1425110:three_prime_UTR 55.0%
GTGGTCACCATAGTGATCGG+CGG - tig0025825:15707-15726 Msa1425120:CDS 55.0%
TCTGTGACCGCCGATCACTA+TGG + tig0025825:15717-15736 Msa1425110:three_prime_UTR 55.0%
ATAGTGATCGGCGGTCACAG+AGG - tig0025825:15716-15735 Msa1425120:CDS 55.0%
GAGACGGAGCCGACATGAAT+CGG - tig0025825:15738-15757 Msa1425120:CDS 55.0%
GAGCCGACATGAATCGGACT+CGG - tig0025825:15744-15763 Msa1425120:CDS 55.0%
! GGCGAAAAAGGCGCAGAGAA+AGG - tig0025825:15861-15880 Msa1425120:intron 55.0%
! AGAGGGTAGTGGTAGGCACT+AGG - tig0025825:16392-16411 Msa1425120:intron 55.0%
AATCAATAACCCGGGGGCTG+GGG + tig0025825:17138-17157 Msa1425110:three_prime_UTR 55.0%
TCGAGCTGAGTTCCAGGACT+GGG - tig0025825:17506-17525 Msa1425120:intron 55.0%
CAGTCGTGGGTCGAAGACAT+GGG + tig0025825:17963-17982 None:intergenic 55.0%
CAGCAGCACTGTGACGACAA+CGG + tig0025825:18312-18331 None:intergenic 55.0%
ACTCGGTCCATCACTGCAGT+TGG + tig0025825:18368-18387 None:intergenic 55.0%
GATCTCAACACGCCCATGTC+TGG - tig0025825:19077-19096 Msa1425120:intron 55.0%
! CCGGTTTTGCGAGGTTGAGT+TGG + tig0025825:19212-19231 None:intergenic 55.0%
GTGCTTACAAGGCTTGGCCT+TGG + tig0025825:19287-19306 None:intergenic 55.0%
CTTCATGCAGGCACTCCTTC+TGG - tig0025825:20753-20772 Msa1425120:intron 55.0%
ATTGATCGAGCTAGGGTGCG+TGG - tig0025825:20817-20836 Msa1425120:intron 55.0%
! GAGGTGCTTGCTGAACAGAG+AGG - tig0025825:20856-20875 Msa1425120:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + tig0025825:21962-21981 None:intergenic 55.0%
TGTAGCCGACCCCACTTAGT+GGG + tig0025825:21968-21987 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + tig0025825:21969-21988 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - tig0025825:21968-21987 Msa1425120:intron 55.0%
TACCCCCACTCTCTCTCGAA+TGG - tig0025825:22221-22240 Msa1425120:intron 55.0%
CACCATTCGAGAGAGAGTGG+GGG + tig0025825:22226-22245 None:intergenic 55.0%
CGGAGATGAGGATGTTGCGT+TGG + tig0025825:22287-22306 None:intergenic 55.0%
TGTTGGCGCAGGTCTATTGG+TGG - tig0025825:22637-22656 Msa1425120:CDS 55.0%
GGCATGACAAATACAGGCCC+AGG - tig0025825:22658-22677 Msa1425120:intron 55.0%
ATCGGCGGTCACAGAGGAGA+CGG - tig0025825:15722-15741 Msa1425120:CDS 60.0%
! CGTTCTGGGTACCATCTGCC+TGG - tig0025825:17369-17388 Msa1425120:CDS 60.0%
ACGTGCTCGAGCTGAGTTCC+AGG - tig0025825:17500-17519 Msa1425120:intron 60.0%
CTCGAGCTGAGTTCCAGGAC+TGG - tig0025825:17505-17524 Msa1425120:intron 60.0%
TCGTGGGTCGAAGACATGGG+AGG + tig0025825:17960-17979 None:intergenic 60.0%
GCAGTCGTGGGTCGAAGACA+TGG + tig0025825:17964-17983 None:intergenic 60.0%
CAAATCTCGACACCCGCCTC+AGG - tig0025825:19332-19351 Msa1425120:intron 60.0%
! GACACCTGAAGCGTGGGCTA+AGG - tig0025825:19365-19384 Msa1425120:intron 60.0%
TGGAGAAGAACCTCCAGCCG+AGG - tig0025825:20837-20856 Msa1425120:intron 60.0%
TGTTCAGCAAGCACCTCGGC+TGG + tig0025825:20853-20872 None:intergenic 60.0%
CTTCGTATGGTGGCCCTGCA+TGG + tig0025825:22890-22909 None:intergenic 60.0%
CCTTCATACACCCCAGCCCC+CGG - tig0025825:17125-17144 Msa1425120:CDS 65.0%
CTTCATACACCCCAGCCCCC+GGG - tig0025825:17126-17145 Msa1425120:CDS 65.0%
TCGACACCCGCCTCAGGCTT+AGG - tig0025825:19338-19357 Msa1425120:intron 65.0%
CCTGCCTTAGCCCACGCTTC+AGG + tig0025825:19372-19391 None:intergenic 65.0%
! CCTGAAGCGTGGGCTAAGGC+AGG - tig0025825:19369-19388 Msa1425120:intron 65.0%
! GAAGCGTGGGCTAAGGCAGG+TGG - tig0025825:19372-19391 Msa1425120:intron 65.0%
TCAGCAAGCACCTCGGCTGG+AGG + tig0025825:20850-20869 None:intergenic 65.0%
CCGGGGGCTGGGGTGTATGA+AGG + tig0025825:17128-17147 Msa1425110:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
tig0025825 gene 15683 23109 15683 ID=Msa1425120;Name=Msa1425120
tig0025825 mRNA 15683 23109 15683 ID=Msa1425120-mRNA-1;Parent=Msa1425120;Name=Msa1425120-mRNA-1;_AED=0.15;_eAED=0.21;_QI=0|0.36|0.33|1|0.90|0.83|12|0|577
tig0025825 exon 22987 23109 22987 ID=Msa1425120-mRNA-1:exon:4186;Parent=Msa1425120-mRNA-1
tig0025825 exon 22566 22657 22566 ID=Msa1425120-mRNA-1:exon:4185;Parent=Msa1425120-mRNA-1
tig0025825 exon 21833 21932 21833 ID=Msa1425120-mRNA-1:exon:4184;Parent=Msa1425120-mRNA-1
tig0025825 exon 21486 21557 21486 ID=Msa1425120-mRNA-1:exon:4183;Parent=Msa1425120-mRNA-1
tig0025825 exon 21199 21309 21199 ID=Msa1425120-mRNA-1:exon:4182;Parent=Msa1425120-mRNA-1
tig0025825 exon 19980 20075 19980 ID=Msa1425120-mRNA-1:exon:4181;Parent=Msa1425120-mRNA-1
tig0025825 exon 17745 18029 17745 ID=Msa1425120-mRNA-1:exon:4180;Parent=Msa1425120-mRNA-1
tig0025825 exon 17508 17643 17508 ID=Msa1425120-mRNA-1:exon:4179;Parent=Msa1425120-mRNA-1
tig0025825 exon 17250 17404 17250 ID=Msa1425120-mRNA-1:exon:4178;Parent=Msa1425120-mRNA-1
tig0025825 exon 16980 17156 16980 ID=Msa1425120-mRNA-1:exon:4177;Parent=Msa1425120-mRNA-1
tig0025825 exon 15878 16144 15878 ID=Msa1425120-mRNA-1:exon:4176;Parent=Msa1425120-mRNA-1
tig0025825 exon 15683 15802 15683 ID=Msa1425120-mRNA-1:exon:4175;Parent=Msa1425120-mRNA-1
tig0025825 CDS 22987 23109 22987 ID=Msa1425120-mRNA-1:cds;Parent=Msa1425120-mRNA-1
tig0025825 CDS 22566 22657 22566 ID=Msa1425120-mRNA-1:cds;Parent=Msa1425120-mRNA-1
tig0025825 CDS 21833 21932 21833 ID=Msa1425120-mRNA-1:cds;Parent=Msa1425120-mRNA-1
tig0025825 CDS 21486 21557 21486 ID=Msa1425120-mRNA-1:cds;Parent=Msa1425120-mRNA-1
tig0025825 CDS 21199 21309 21199 ID=Msa1425120-mRNA-1:cds;Parent=Msa1425120-mRNA-1
tig0025825 CDS 19980 20075 19980 ID=Msa1425120-mRNA-1:cds;Parent=Msa1425120-mRNA-1
tig0025825 CDS 17745 18029 17745 ID=Msa1425120-mRNA-1:cds;Parent=Msa1425120-mRNA-1
tig0025825 CDS 17508 17643 17508 ID=Msa1425120-mRNA-1:cds;Parent=Msa1425120-mRNA-1
tig0025825 CDS 17250 17404 17250 ID=Msa1425120-mRNA-1:cds;Parent=Msa1425120-mRNA-1
tig0025825 CDS 16980 17156 16980 ID=Msa1425120-mRNA-1:cds;Parent=Msa1425120-mRNA-1
tig0025825 CDS 15878 16144 15878 ID=Msa1425120-mRNA-1:cds;Parent=Msa1425120-mRNA-1
tig0025825 CDS 15683 15802 15683 ID=Msa1425120-mRNA-1:cds;Parent=Msa1425120-mRNA-1
Gene Sequence

>Msa1425120

ATGATTCCGATAGAATCCGGAGGAGTGGTCACCATAGTGATCGGCGGTCACAGAGGAGACGGAGCCGACATGAATCGGACTCGGATAATTCTACTTCTGATGATAGTAGTAGTGATAGGGATGGCGTTGAAAGTTGCTAAGAAATTGAAGGCTCATACTGTGTCTGGATATTCAAATGACTCGAATCCATTTGGTGATTCCAATCTTAATGAGAAGTTTGTTTGGCGTAAGAAGATTGAGCGTGATGTTGTTCAAGGTGTGCCTATTGATGAATTTTCAGTTAAAGCTGAGAAAAAGAGACAGAGAGAAAGGATGGCGGAAATTGAAAAGGTGAAAAAACGAAGAGAAGAGAGGGCACTTGAGAAAGCACGACATGAGGAAGAAATGGCATTGTTAGCTAGAGAACGTGCTCGAGCTGAGTTCCAGGACTGGGAAAAAAGAGAAGTGGAGGTATGGCTGCTTGAATGGCTTCCATTTGTTGTTATATCAAATAAAATGGGTTTGACAGTGAACGAAATGGAAGAGCTCCGTGATGATATCAAAATGCATTTGGACTTTGACAGGGCCACGCCAACCCATGTAGAATATTGGGAGGCACTCCTTCTGGTGAGTGATTGGGAGTTAGCTGAAGCTAGAAAAAAAGATGCAATTGATCGAGCTAGGGTGCGTGGAGAAGAACCTCCAGCCGAGGTGCTTGCTGAACAGAGAGGTCTGCATAACAGTGTTGAACCAGATGTGAAGAAGCTTTTGCAGGGGAAGACACATGCAGAATTGGAAGCTTTGCAGGCGCATATTGAGTCAGAAATGCGTACTGGTGCAGCAAAGCTTGTTGAGTACTGGGAGACTGTTTTAAAGTACCTCCGCATATATAAAGCCAAGGCTTGTTTAAAGGAAATTCATGCCAAAATGTTACGCAAGCATTTGCTACGCCTTAAGAAACCATCAGAGGGTGAAGATAAATTGGAAGATGCTCATGTTATGAAATCTGAGGAGGATATTGAGGATTATGTTAAATTCCAATATGCAAAGAGATCACTTTCTCCCGAACCCATTAAAGCAGAGGGTCAAGAAGGTGAAGTAGAAGATGAGGCTGGGTCCTTTTCACCAGAACTGTTTCATGGTGATGAAAATGAGGAAGCTATTGATCCTGAAGAGGACAGAGCTCTACTGGAACAAAAACGTTTGTCTGTAAAAGAAGAGCAGCAGAGACGAATTCAGGAAGCAATGGCATCAAAGCCTGCTCCATCTGAAGATAATTTTGAGATGAAAGCCATGAAGGCTATGGGAGCTATTGAAGAAGGAGATGTAATGTTTGGCTCTGGTGCAGAAGTAAATCTGGATTCACAGGTCTATTGGTGGCATGACAAATACAGGCCCAGGAAACCAAAGTATTTCAACCGTGTTCATACTGGATATGAGTGGAACAAATATAATCAGACTCACTATGATCATGACAATCCACCTCCAAAGGTTGTACAAGGGTATAAATTTAACATATTCTACCCAGACCTTGTAGACAAGACACAAGCTCCAACTTACACTATTGAGAAGGATGGCAGCAATGGCGAGACTTGCATCATAAGATTCCATGCAGGGCCACCATACGAAGACATTGCTTTCCGCATTGTAAACAAAGAATGGGAATATTCTCACAAGAAAGGTTTTAAGTGCACATTTGAACGTGGAATTCTACATGTATACTTCAATTTCAAACGCCACCGCTACCGCAGATAA

Protein sequence

>Msa1425120

MIPIESGGVVTIVIGGHRGDGADMNRTRIILLLMIVVVIGMALKVAKKLKAHTVSGYSNDSNPFGDSNLNEKFVWRKKIERDVVQGVPIDEFSVKAEKKRQRERMAEIEKVKKRREERALEKARHEEEMALLARERARAEFQDWEKREVEVWLLEWLPFVVISNKMGLTVNEMEELRDDIKMHLDFDRATPTHVEYWEALLLVSDWELAEARKKDAIDRARVRGEEPPAEVLAEQRGLHNSVEPDVKKLLQGKTHAELEALQAHIESEMRTGAAKLVEYWETVLKYLRIYKAKACLKEIHAKMLRKHLLRLKKPSEGEDKLEDAHVMKSEEDIEDYVKFQYAKRSLSPEPIKAEGQEGEVEDEAGSFSPELFHGDENEEAIDPEEDRALLEQKRLSVKEEQQRRIQEAMASKPAPSEDNFEMKAMKAMGAIEEGDVMFGSGAEVNLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKVVQGYKFNIFYPDLVDKTQAPTYTIEKDGSNGETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRHRYRR*