Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1414820 | sp|Q9FVS1|FBK23_ARATH | 44.706 | 340 | 179 | 5 | 36 | 371 | 13 | 347 | 1.28e-97 | 297 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1414820 | I3SWK4 | 99.468 | 376 | 2 | 0 | 1 | 376 | 1 | 376 | 0.0 | 779 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000880 | Msa1414820 | 0.800648 | 1.305862e-48 | -8.615850e-47 |
| Msa0000910 | Msa1414820 | 0.856918 | 2.324117e-62 | -8.615850e-47 |
| Msa0024400 | Msa1414820 | 0.972214 | 2.111375e-134 | -8.615850e-47 |
| Msa0027890 | Msa1414820 | 0.815284 | 1.000359e-51 | -8.615850e-47 |
| Msa0065680 | Msa1414820 | -0.809571 | 1.771429e-50 | -8.615850e-47 |
| Msa0072720 | Msa1414820 | 0.867286 | 1.530664e-65 | -8.615850e-47 |
| Msa0076290 | Msa1414820 | 0.821655 | 3.598143e-53 | -8.615850e-47 |
| Msa0089980 | Msa1414820 | 0.822770 | 1.982476e-53 | -8.615850e-47 |
| Msa0090010 | Msa1414820 | 0.819851 | 9.347148e-53 | -8.615850e-47 |
| Msa0091730 | Msa1414820 | 0.829602 | 4.696706e-55 | -8.615850e-47 |
| Msa0106620 | Msa1414820 | 0.806876 | 6.647684e-50 | -8.615850e-47 |
| Msa0106710 | Msa1414820 | 0.812201 | 4.775694e-51 | -8.615850e-47 |
| Msa0120280 | Msa1414820 | 0.962755 | 2.946498e-121 | -8.615850e-47 |
| Msa1345100 | Msa1414820 | 0.808104 | 3.648567e-50 | -8.615850e-47 |
| Msa1371520 | Msa1414820 | 0.830781 | 2.420939e-55 | -8.615850e-47 |
| Msa1371550 | Msa1414820 | 0.801803 | 7.578221e-49 | -8.615850e-47 |
| Msa1373820 | Msa1414820 | 0.811400 | 7.134859e-51 | -8.615850e-47 |
| Msa1373850 | Msa1414820 | 0.862331 | 5.465351e-64 | -8.615850e-47 |
| Msa1378410 | Msa1414820 | 0.823467 | 1.363672e-53 | -8.615850e-47 |
| Msa1380900 | Msa1414820 | 0.821458 | 3.994580e-53 | -8.615850e-47 |
| Msa1392980 | Msa1414820 | 0.843962 | 1.014579e-58 | -8.615850e-47 |
| Msa1393820 | Msa1414820 | 0.818631 | 1.772584e-52 | -8.615850e-47 |
| Msa1407370 | Msa1414820 | 0.804462 | 2.135675e-49 | -8.615850e-47 |
| Msa1411950 | Msa1414820 | 0.817409 | 3.347600e-52 | -8.615850e-47 |
| Msa1414820 | Msa1418240 | 0.802559 | 5.297710e-49 | -8.615850e-47 |
| Msa1414820 | Msa1419690 | 0.843929 | 1.035289e-58 | -8.615850e-47 |
| Msa1414820 | Msa1420120 | 0.857263 | 1.838416e-62 | -8.615850e-47 |
| Msa1414820 | Msa1422580 | 0.808275 | 3.354515e-50 | -8.615850e-47 |
| Msa1414820 | Msa1422590 | 0.807160 | 5.790421e-50 | -8.615850e-47 |
| Msa1414820 | Msa1425120 | 0.828361 | 9.381967e-55 | -8.615850e-47 |
| Msa1414820 | Msa1432130 | 0.808760 | 2.643162e-50 | -8.615850e-47 |
| Msa1414820 | Msa1433700 | 0.854230 | 1.413145e-61 | -8.615850e-47 |
| Msa1414820 | Msa1434740 | 0.836971 | 6.844998e-57 | -8.615850e-47 |
| Msa1414820 | Msa1442920 | 0.816092 | 6.609768e-52 | -8.615850e-47 |
| Msa1414820 | Msa1443180 | 0.803333 | 3.664551e-49 | -8.615850e-47 |
| Msa1414820 | Msa1446080 | 0.815656 | 8.267906e-52 | -8.615850e-47 |
| Msa1414820 | Msa1452710 | 0.814794 | 1.284726e-51 | -8.615850e-47 |
| Msa1414820 | Msa1458290 | 0.807783 | 4.270187e-50 | -8.615850e-47 |
| Msa0604290 | Msa1414820 | 0.813090 | 3.051521e-51 | -8.615850e-47 |
| Msa0607320 | Msa1414820 | 0.849670 | 2.785990e-60 | -8.615850e-47 |
| Msa0607520 | Msa1414820 | 0.804181 | 2.443643e-49 | -8.615850e-47 |
| Msa0620230 | Msa1414820 | 0.811928 | 5.477940e-51 | -8.615850e-47 |
| Msa0622790 | Msa1414820 | 0.808501 | 3.002914e-50 | -8.615850e-47 |
| Msa0623990 | Msa1414820 | 0.817036 | 4.060535e-52 | -8.615850e-47 |
| Msa0624060 | Msa1414820 | 0.816643 | 4.974603e-52 | -8.615850e-47 |
| Msa0628420 | Msa1414820 | 0.824386 | 8.300482e-54 | -8.615850e-47 |
| Msa0629240 | Msa1414820 | 0.816429 | 5.554433e-52 | -8.615850e-47 |
| Msa0647430 | Msa1414820 | 0.837486 | 5.052786e-57 | -8.615850e-47 |
| Msa0651560 | Msa1414820 | 0.855646 | 5.486101e-62 | -8.615850e-47 |
| Msa0665280 | Msa1414820 | 0.820699 | 5.975973e-53 | -8.615850e-47 |
| Msa0676130 | Msa1414820 | 0.818641 | 1.763278e-52 | -8.615850e-47 |
| Msa0676180 | Msa1414820 | 0.814449 | 1.531822e-51 | -8.615850e-47 |
| Msa0677530 | Msa1414820 | 0.808376 | 3.192214e-50 | -8.615850e-47 |
| Msa0690310 | Msa1414820 | 0.882836 | 7.453753e-71 | -8.615850e-47 |
| Msa0690540 | Msa1414820 | 0.800536 | 1.376423e-48 | -8.615850e-47 |
| Msa0692980 | Msa1414820 | 0.810699 | 1.012499e-50 | -8.615850e-47 |
| Msa0693330 | Msa1414820 | 0.831224 | 1.883884e-55 | -8.615850e-47 |
| Msa0702720 | Msa1414820 | 0.812267 | 4.621092e-51 | -8.615850e-47 |
| Msa0743530 | Msa1414820 | 0.811066 | 8.429174e-51 | -8.615850e-47 |
| Msa0746170 | Msa1414820 | 0.808675 | 2.756937e-50 | -8.615850e-47 |
| Msa0746210 | Msa1414820 | 0.809590 | 1.754953e-50 | -8.615850e-47 |
| Msa0755150 | Msa1414820 | 0.800160 | 1.641714e-48 | -8.615850e-47 |
| Msa0755330 | Msa1414820 | 0.830030 | 3.694819e-55 | -8.615850e-47 |
| Msa0756380 | Msa1414820 | 0.818619 | 1.783111e-52 | -8.615850e-47 |
| Msa0780930 | Msa1414820 | 0.812445 | 4.223652e-51 | -8.615850e-47 |
| Msa0784480 | Msa1414820 | 0.826484 | 2.645050e-54 | -8.615850e-47 |
| Msa0786750 | Msa1414820 | 0.834322 | 3.204640e-56 | -8.615850e-47 |
| Msa0789560 | Msa1414820 | 0.808172 | 3.529815e-50 | -8.615850e-47 |
| Msa0794970 | Msa1414820 | 0.811516 | 6.733125e-51 | -8.615850e-47 |
| Msa0819490 | Msa1414820 | 0.809510 | 1.826320e-50 | -8.615850e-47 |
| Msa0822500 | Msa1414820 | 0.829373 | 5.339491e-55 | -8.615850e-47 |
| Msa0828250 | Msa1414820 | 0.836460 | 9.240396e-57 | -8.615850e-47 |
| Msa0829220 | Msa1414820 | 0.818359 | 2.043029e-52 | -8.615850e-47 |
| Msa0830660 | Msa1414820 | 0.803700 | 3.076328e-49 | -8.615850e-47 |
| Msa0831100 | Msa1414820 | 0.803638 | 3.168394e-49 | -8.615850e-47 |
| Msa0833530 | Msa1414820 | 0.824874 | 6.372232e-54 | -8.615850e-47 |
| Msa0120990 | Msa1414820 | 0.843806 | 1.116990e-58 | -8.615850e-47 |
| Msa0122530 | Msa1414820 | 0.848126 | 7.476019e-60 | -8.615850e-47 |
| Msa0138360 | Msa1414820 | 0.837732 | 4.370536e-57 | -8.615850e-47 |
| Msa0147980 | Msa1414820 | 0.845345 | 4.303589e-59 | -8.615850e-47 |
| Msa0154840 | Msa1414820 | -0.827345 | 1.647020e-54 | -8.615850e-47 |
| Msa0163510 | Msa1414820 | 0.988062 | 1.445196e-172 | -8.615850e-47 |
| Msa0166460 | Msa1414820 | 0.831966 | 1.237052e-55 | -8.615850e-47 |
| Msa0167980 | Msa1414820 | 0.830762 | 2.446886e-55 | -8.615850e-47 |
| Msa0171870 | Msa1414820 | 0.806549 | 7.795323e-50 | -8.615850e-47 |
| Msa0173800 | Msa1414820 | 0.815947 | 7.120727e-52 | -8.615850e-47 |
| Msa0189530 | Msa1414820 | 0.839262 | 1.760302e-57 | -8.615850e-47 |
| Msa0194920 | Msa1414820 | 0.822861 | 1.888388e-53 | -8.615850e-47 |
| Msa0195630 | Msa1414820 | 0.811317 | 7.438951e-51 | -8.615850e-47 |
| Msa0195640 | Msa1414820 | 0.802258 | 6.110846e-49 | -8.615850e-47 |
| Msa0204960 | Msa1414820 | 0.829947 | 3.870532e-55 | -8.615850e-47 |
| Msa0207350 | Msa1414820 | 0.800872 | 1.175432e-48 | -8.615850e-47 |
| Msa0214550 | Msa1414820 | 0.820060 | 8.371377e-53 | -8.615850e-47 |
| Msa0215990 | Msa1414820 | 0.805627 | 1.218565e-49 | -8.615850e-47 |
| Msa0217670 | Msa1414820 | 0.893377 | 6.653412e-75 | -8.615850e-47 |
| Msa0223330 | Msa1414820 | 0.803926 | 2.760255e-49 | -8.615850e-47 |
| Msa0223340 | Msa1414820 | 0.812513 | 4.081546e-51 | -8.615850e-47 |
| Msa0225620 | Msa1414820 | 0.800891 | 1.164894e-48 | -8.615850e-47 |
| Msa0231800 | Msa1414820 | 0.845655 | 3.545838e-59 | -8.615850e-47 |
| Msa0237300 | Msa1414820 | 0.852587 | 4.186581e-61 | -8.615850e-47 |
| Msa0237410 | Msa1414820 | 0.805841 | 1.098711e-49 | -8.615850e-47 |
| Msa1228040 | Msa1414820 | 0.886267 | 3.967416e-72 | -8.615850e-47 |
| Msa1233850 | Msa1414820 | 0.806400 | 8.378770e-50 | -8.615850e-47 |
| Msa1252970 | Msa1414820 | 0.833890 | 4.112436e-56 | -8.615850e-47 |
| Msa1259640 | Msa1414820 | 0.805600 | 1.234239e-49 | -8.615850e-47 |
| Msa1260220 | Msa1414820 | 0.821521 | 3.863032e-53 | -8.615850e-47 |
| Msa1271130 | Msa1414820 | 0.862375 | 5.297512e-64 | -8.615850e-47 |
| Msa1276150 | Msa1414820 | 0.825053 | 5.781960e-54 | -8.615850e-47 |
| Msa1292020 | Msa1414820 | 0.845905 | 3.032772e-59 | -8.615850e-47 |
| Msa1297530 | Msa1414820 | 0.822400 | 2.417184e-53 | -8.615850e-47 |
| Msa1308220 | Msa1414820 | 0.857314 | 1.776471e-62 | -8.615850e-47 |
| Msa1327640 | Msa1414820 | 0.869389 | 3.211374e-66 | -8.615850e-47 |
| Msa1329790 | Msa1414820 | 0.802147 | 6.440324e-49 | -8.615850e-47 |
| Msa1331760 | Msa1414820 | 0.804031 | 2.625216e-49 | -8.615850e-47 |
| Msa1340200 | Msa1414820 | 0.804763 | 1.847892e-49 | -8.615850e-47 |
| Msa1340550 | Msa1414820 | 0.808390 | 3.170964e-50 | -8.615850e-47 |
| Msa1341300 | Msa1414820 | 0.808103 | 3.650820e-50 | -8.615850e-47 |
| Msa0376630 | Msa1414820 | 0.827456 | 1.549283e-54 | -8.615850e-47 |
| Msa0377820 | Msa1414820 | 0.819506 | 1.120677e-52 | -8.615850e-47 |
| Msa0379650 | Msa1414820 | 0.800326 | 1.519136e-48 | -8.615850e-47 |
| Msa0382370 | Msa1414820 | 0.844693 | 6.456485e-59 | -8.615850e-47 |
| Msa0385500 | Msa1414820 | 0.860135 | 2.551013e-63 | -8.615850e-47 |
| Msa0389510 | Msa1414820 | 0.805137 | 1.543581e-49 | -8.615850e-47 |
| Msa0395980 | Msa1414820 | 0.829792 | 4.221942e-55 | -8.615850e-47 |
| Msa0426580 | Msa1414820 | 0.807850 | 4.132917e-50 | -8.615850e-47 |
| Msa0432160 | Msa1414820 | 0.861786 | 8.031848e-64 | -8.615850e-47 |
| Msa0432500 | Msa1414820 | 0.806000 | 1.017467e-49 | -8.615850e-47 |
| Msa0439960 | Msa1414820 | 0.844709 | 6.391237e-59 | -8.615850e-47 |
| Msa0440510 | Msa1414820 | 0.832519 | 9.027567e-56 | -8.615850e-47 |
| Msa0450400 | Msa1414820 | -0.817390 | 3.380550e-52 | -8.615850e-47 |
| Msa0463850 | Msa1414820 | 0.801191 | 1.011635e-48 | -8.615850e-47 |
| Msa0468250 | Msa1414820 | 0.831050 | 2.079070e-55 | -8.615850e-47 |
| Msa0472930 | Msa1414820 | 0.809853 | 1.540550e-50 | -8.615850e-47 |
| Msa0476680 | Msa1414820 | 0.856083 | 4.088058e-62 | -8.615850e-47 |
| Msa0985180 | Msa1414820 | 0.808865 | 2.510561e-50 | -8.615850e-47 |
| Msa0992510 | Msa1414820 | 0.848849 | 4.715833e-60 | -8.615850e-47 |
| Msa0999680 | Msa1414820 | 0.801856 | 7.392360e-49 | -8.615850e-47 |
| Msa1002960 | Msa1414820 | 0.812983 | 3.221002e-51 | -8.615850e-47 |
| Msa1034500 | Msa1414820 | 0.824689 | 7.046024e-54 | -8.615850e-47 |
| Msa1036300 | Msa1414820 | 0.839296 | 1.725100e-57 | -8.615850e-47 |
| Msa1037510 | Msa1414820 | 0.805156 | 1.529591e-49 | -8.615850e-47 |
| Msa1037520 | Msa1414820 | 0.859001 | 5.591860e-63 | -8.615850e-47 |
| Msa1047760 | Msa1414820 | 0.855995 | 4.338317e-62 | -8.615850e-47 |
| Msa1050910 | Msa1414820 | 0.802355 | 5.836250e-49 | -8.615850e-47 |
| Msa1070460 | Msa1414820 | 0.816733 | 4.750197e-52 | -8.615850e-47 |
| Msa1071050 | Msa1414820 | 0.823183 | 1.589079e-53 | -8.615850e-47 |
| Msa1075970 | Msa1414820 | 0.839991 | 1.137604e-57 | -8.615850e-47 |
| Msa1076560 | Msa1414820 | 0.803871 | 2.834420e-49 | -8.615850e-47 |
| Msa1089450 | Msa1414820 | 0.835509 | 1.610403e-56 | -8.615850e-47 |
| Msa0240900 | Msa1414820 | 0.815132 | 1.081262e-51 | -8.615850e-47 |
| Msa0249860 | Msa1414820 | 0.810016 | 1.421357e-50 | -8.615850e-47 |
| Msa0254940 | Msa1414820 | 0.804492 | 2.105200e-49 | -8.615850e-47 |
| Msa0256140 | Msa1414820 | 0.806328 | 8.675855e-50 | -8.615850e-47 |
| Msa0257490 | Msa1414820 | 0.879644 | 1.053273e-69 | -8.615850e-47 |
| Msa0264840 | Msa1414820 | 0.824019 | 1.012737e-53 | -8.615850e-47 |
| Msa0267920 | Msa1414820 | 0.814853 | 1.246897e-51 | -8.615850e-47 |
| Msa0271350 | Msa1414820 | 0.810207 | 1.292913e-50 | -8.615850e-47 |
| Msa0274720 | Msa1414820 | 0.849422 | 3.267290e-60 | -8.615850e-47 |
| Msa0274980 | Msa1414820 | 0.807187 | 5.712708e-50 | -8.615850e-47 |
| Msa0279850 | Msa1414820 | 0.802463 | 5.543952e-49 | -8.615850e-47 |
| Msa0281530 | Msa1414820 | 0.828938 | 6.805652e-55 | -8.615850e-47 |
| Msa0288010 | Msa1414820 | -0.804171 | 2.455470e-49 | -8.615850e-47 |
| Msa0296250 | Msa1414820 | 0.802420 | 5.657741e-49 | -8.615850e-47 |
| Msa0296790 | Msa1414820 | 0.883217 | 5.409074e-71 | -8.615850e-47 |
| Msa0302570 | Msa1414820 | 0.806236 | 9.071574e-50 | -8.615850e-47 |
| Msa0315520 | Msa1414820 | 0.847433 | 1.159951e-59 | -8.615850e-47 |
| Msa0315690 | Msa1414820 | 0.812119 | 4.976150e-51 | -8.615850e-47 |
| Msa0317970 | Msa1414820 | 0.826219 | 3.059090e-54 | -8.615850e-47 |
| Msa0320590 | Msa1414820 | 0.830695 | 2.540785e-55 | -8.615850e-47 |
| Msa0322900 | Msa1414820 | 0.803966 | 2.709157e-49 | -8.615850e-47 |
| Msa0326590 | Msa1414820 | 0.800219 | 1.597254e-48 | -8.615850e-47 |
| Msa0336450 | Msa1414820 | 0.800978 | 1.118235e-48 | -8.615850e-47 |
| Msa0340330 | Msa1414820 | 0.826012 | 3.425383e-54 | -8.615850e-47 |
| Msa0358400 | Msa1414820 | 0.835827 | 1.337414e-56 | -8.615850e-47 |
| Msa0362890 | Msa1414820 | 0.814580 | 1.432944e-51 | -8.615850e-47 |
| Msa0363060 | Msa1414820 | 0.810336 | 1.212673e-50 | -8.615850e-47 |
| Msa1118450 | Msa1414820 | 0.820205 | 7.756917e-53 | -8.615850e-47 |
| Msa1118860 | Msa1414820 | 0.804032 | 2.623952e-49 | -8.615850e-47 |
| Msa1127590 | Msa1414820 | 0.800523 | 1.384582e-48 | -8.615850e-47 |
| Msa1130400 | Msa1414820 | 0.810529 | 1.101899e-50 | -8.615850e-47 |
| Msa1133590 | Msa1414820 | 0.853547 | 2.224063e-61 | -8.615850e-47 |
| Msa1166660 | Msa1414820 | 0.805342 | 1.398104e-49 | -8.615850e-47 |
| Msa1178580 | Msa1414820 | 0.824250 | 8.934709e-54 | -8.615850e-47 |
| Msa1184230 | Msa1414820 | 0.823825 | 1.124551e-53 | -8.615850e-47 |
| Msa1205590 | Msa1414820 | 0.800715 | 1.265553e-48 | -8.615850e-47 |
| Msa1206650 | Msa1414820 | 0.808758 | 2.646441e-50 | -8.615850e-47 |
| Msa1209440 | Msa1414820 | 0.811804 | 5.829304e-51 | -8.615850e-47 |
| Msa1211230 | Msa1414820 | -0.805191 | 1.503812e-49 | -8.615850e-47 |
| Msa1211340 | Msa1414820 | 0.804267 | 2.345354e-49 | -8.615850e-47 |
| Msa1211420 | Msa1414820 | -0.813794 | 2.136778e-51 | -8.615850e-47 |
| Msa1213890 | Msa1414820 | 0.823621 | 1.255173e-53 | -8.615850e-47 |
| Msa1213980 | Msa1414820 | 0.839585 | 1.450695e-57 | -8.615850e-47 |
| Msa0491000 | Msa1414820 | 0.849843 | 2.493310e-60 | -8.615850e-47 |
| Msa0515340 | Msa1414820 | 0.801541 | 8.576497e-49 | -8.615850e-47 |
| Msa0517590 | Msa1414820 | 0.809466 | 1.866554e-50 | -8.615850e-47 |
| Msa0521010 | Msa1414820 | 0.851344 | 9.436286e-61 | -8.615850e-47 |
| Msa0527190 | Msa1414820 | 0.841801 | 3.812197e-58 | -8.615850e-47 |
| Msa0527540 | Msa1414820 | 0.847048 | 1.479675e-59 | -8.615850e-47 |
| Msa0531250 | Msa1414820 | 0.812374 | 4.378958e-51 | -8.615850e-47 |
| Msa0542290 | Msa1414820 | 0.807516 | 4.866613e-50 | -8.615850e-47 |
| Msa0542560 | Msa1414820 | 0.807511 | 4.877769e-50 | -8.615850e-47 |
| Msa0547160 | Msa1414820 | 0.802566 | 5.278736e-49 | -8.615850e-47 |
| Msa0549450 | Msa1414820 | 0.814469 | 1.516183e-51 | -8.615850e-47 |
| Msa0855870 | Msa1414820 | 0.815537 | 8.785379e-52 | -8.615850e-47 |
| Msa0878220 | Msa1414820 | 0.824311 | 8.643821e-54 | -8.615850e-47 |
| Msa0880450 | Msa1414820 | 0.831652 | 1.478322e-55 | -8.615850e-47 |
| Msa0882520 | Msa1414820 | 0.803554 | 3.298699e-49 | -8.615850e-47 |
| Msa0910960 | Msa1414820 | 0.845335 | 4.330696e-59 | -8.615850e-47 |
| Msa0928180 | Msa1414820 | 0.800760 | 1.238970e-48 | -8.615850e-47 |
| Msa0943970 | Msa1414820 | 0.809515 | 1.821723e-50 | -8.615850e-47 |
| Msa0944020 | Msa1414820 | 0.817121 | 3.887054e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1414820 | MtrunA17_Chr1g0178491 | 99.468 | 376 | 2 | 0 | 1 | 376 | 1 | 376 | 0.0 | 779 |
| Msa1414820 | MtrunA17_Chr7g0266441 | 64.187 | 363 | 119 | 6 | 19 | 374 | 17 | 375 | 5.23e-165 | 466 |
| Msa1414820 | MtrunA17_Chr7g0266431 | 64.737 | 190 | 65 | 2 | 185 | 373 | 2 | 190 | 3.40e-83 | 251 |
| Msa1414820 | MtrunA17_Chr7g0266421 | 67.857 | 84 | 27 | 0 | 19 | 102 | 13 | 96 | 5.07e-35 | 125 |
| Msa1414820 | MtrunA17_Chr2g0286361 | 32.195 | 205 | 114 | 7 | 114 | 306 | 4 | 195 | 3.25e-22 | 94.7 |
| Msa1414820 | MtrunA17_Chr2g0283611 | 28.070 | 171 | 114 | 4 | 34 | 198 | 13 | 180 | 1.01e-13 | 71.2 |
| Msa1414820 | MtrunA17_Chr3g0143621 | 21.574 | 343 | 207 | 11 | 36 | 327 | 24 | 355 | 6.93e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1414820 | AT1G57790.1 | 44.706 | 340 | 179 | 5 | 36 | 371 | 13 | 347 | 1.30e-98 | 297 |
| Msa1414820 | AT3G56470.1 | 43.860 | 342 | 178 | 4 | 34 | 372 | 27 | 357 | 1.14e-95 | 290 |
| Msa1414820 | AT4G00893.1 | 42.700 | 363 | 194 | 7 | 17 | 371 | 26 | 382 | 2.94e-95 | 290 |
| Msa1414820 | AT4G12370.1 | 44.702 | 302 | 155 | 6 | 83 | 375 | 1 | 299 | 1.98e-81 | 251 |
| Msa1414820 | AT4G10660.1 | 42.997 | 307 | 160 | 5 | 70 | 364 | 9 | 312 | 4.31e-78 | 243 |
| Msa1414820 | AT1G49360.3 | 36.712 | 365 | 187 | 15 | 39 | 373 | 8 | 358 | 3.24e-63 | 207 |
| Msa1414820 | AT1G49360.2 | 36.712 | 365 | 187 | 15 | 39 | 373 | 8 | 358 | 3.24e-63 | 207 |
| Msa1414820 | AT1G49360.4 | 36.712 | 365 | 187 | 15 | 39 | 373 | 8 | 358 | 3.24e-63 | 207 |
| Msa1414820 | AT1G49360.1 | 36.712 | 365 | 187 | 15 | 39 | 373 | 111 | 461 | 1.06e-62 | 208 |
| Msa1414820 | AT1G49360.5 | 36.712 | 365 | 187 | 15 | 39 | 373 | 88 | 438 | 1.07e-62 | 207 |
| Msa1414820 | AT3G18720.1 | 36.390 | 349 | 182 | 11 | 39 | 371 | 52 | 376 | 1.27e-56 | 190 |
| Msa1414820 | AT4G10695.2 | 40.265 | 226 | 131 | 2 | 48 | 269 | 1 | 226 | 8.69e-55 | 180 |
| Msa1414820 | AT4G10695.1 | 40.265 | 226 | 131 | 2 | 48 | 269 | 1 | 226 | 8.69e-55 | 180 |
| Msa1414820 | AT4G12382.1 | 47.619 | 126 | 66 | 0 | 35 | 160 | 9 | 134 | 2.60e-39 | 137 |
| Msa1414820 | AT4G12382.2 | 47.619 | 126 | 66 | 0 | 35 | 160 | 9 | 134 | 2.60e-39 | 137 |
| Msa1414820 | AT4G10700.1 | 47.934 | 121 | 56 | 2 | 255 | 369 | 119 | 238 | 1.42e-28 | 112 |
| Msa1414820 | AT4G10700.1 | 43.373 | 83 | 47 | 0 | 69 | 151 | 8 | 90 | 3.60e-20 | 89.4 |
| Msa1414820 | AT2G44735.1 | 43.396 | 159 | 79 | 7 | 136 | 287 | 110 | 264 | 4.38e-28 | 113 |
| Msa1414820 | AT4G22035.1 | 32.800 | 125 | 79 | 3 | 35 | 155 | 12 | 135 | 1.82e-11 | 63.9 |
| Msa1414820 | AT4G22660.1 | 31.783 | 129 | 72 | 3 | 34 | 150 | 8 | 132 | 6.45e-11 | 63.9 |
Find 112 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTACACATTACTGATTT+TGG | 0.040084 | tig0024143:-48211 | None:intergenic |
| TCATACCACTGACCAAATTT+TGG | 0.144092 | tig0024143:-47308 | None:intergenic |
| AGCTTTGTTGACATTTAATT+TGG | 0.199386 | tig0024143:+50388 | Msa1414820:three_prime_UTR |
| TGGTCTAACTTGAAAATAAT+AGG | 0.240703 | tig0024143:-47890 | None:intergenic |
| AGAGGTGGAAAATGATAATT+TGG | 0.262706 | tig0024143:+47124 | Msa1414820:CDS |
| TTGATAGTCTCCCGAGTAAA+AGG | 0.263964 | tig0024143:-47464 | None:intergenic |
| CATATCTCGTTTAGCCTTAG+AGG | 0.269854 | tig0024143:+47193 | Msa1414820:CDS |
| ATGTTTGATTTGGTTATATA+GGG | 0.278653 | tig0024143:-50607 | None:intergenic |
| AGTTCCTAGTTATCTCTCTT+TGG | 0.284498 | tig0024143:+50124 | Msa1414820:three_prime_UTR |
| TGCCGAAGGCAGCATCTTTA+CGG | 0.292948 | tig0024143:+50184 | Msa1414820:three_prime_UTR |
| AATGTTTGATTTGGTTATAT+AGG | 0.303054 | tig0024143:-50608 | None:intergenic |
| TGACAAAAGGCAGACGGTTT+TGG | 0.312961 | tig0024143:-47643 | None:intergenic |
| AAGAATACTAATGTTTGATT+TGG | 0.320130 | tig0024143:-50617 | None:intergenic |
| GTTCATTAGTTAAGCTCATT+TGG | 0.324864 | tig0024143:+50156 | Msa1414820:three_prime_UTR |
| GTTTCTTGTCTTCTCATTCA+AGG | 0.344326 | tig0024143:+47969 | Msa1414820:CDS |
| GGTCTAACTTGAAAATAATA+GGG | 0.354290 | tig0024143:-47889 | None:intergenic |
| GGCTGCATAAATTTGATGTT+TGG | 0.356014 | tig0024143:+50517 | Msa1414820:three_prime_UTR |
| GCCGAAGGCAGCATCTTTAC+GGG | 0.359572 | tig0024143:+50185 | Msa1414820:three_prime_UTR |
| CTCGTAAGCAGTGGCATGAC+TGG | 0.366506 | tig0024143:+48095 | Msa1414820:CDS |
| AATCTATAGATTTATATAGA+TGG | 0.384207 | tig0024143:+50417 | Msa1414820:three_prime_UTR |
| TCAATCCATATGCTTTCAAA+AGG | 0.390242 | tig0024143:-48130 | None:intergenic |
| ATCATTTCTAATAGTTCAGC+AGG | 0.392094 | tig0024143:-47170 | None:intergenic |
| AGCACGGACATTGTCCTCTA+AGG | 0.396495 | tig0024143:-47207 | None:intergenic |
| ATTGAGTTTCCTGAGTTGAA+TGG | 0.407380 | tig0024143:+47365 | Msa1414820:CDS |
| GCCATCAGCACATGTCACCC+TGG | 0.425844 | tig0024143:+47593 | Msa1414820:CDS |
| GCCCGTAAAGATGCTGCCTT+CGG | 0.427482 | tig0024143:-50186 | None:intergenic |
| CACAAGAGAACGCAACTATC+TGG | 0.427646 | tig0024143:-47511 | None:intergenic |
| CTGAGTCTAACGGGTTGGCT+AGG | 0.428305 | tig0024143:+47713 | Msa1414820:CDS |
| AGAGTTTGTTACACAAAAGA+TGG | 0.432818 | tig0024143:+47392 | Msa1414820:CDS |
| GCTTATATATGCAGAACAAT+TGG | 0.435526 | tig0024143:+50335 | Msa1414820:three_prime_UTR |
| CAAGTTAGACCAGGCCTCAA+TGG | 0.439625 | tig0024143:+47901 | Msa1414820:CDS |
| GAATAGGTCCTCCGCTGCAC+AGG | 0.439702 | tig0024143:-47341 | None:intergenic |
| CTTCTGCGGTTTGCAAGAGT+TGG | 0.446022 | tig0024143:+47228 | Msa1414820:CDS |
| CTTCCCATTCCATTGAGGCC+TGG | 0.447033 | tig0024143:-47910 | None:intergenic |
| TGAGTCTAACGGGTTGGCTA+GGG | 0.453281 | tig0024143:+47714 | Msa1414820:CDS |
| CTCAGGAAACTCAATGGAAT+AGG | 0.455431 | tig0024143:-47357 | None:intergenic |
| TTCTCTGGGCATTTGGGTGG+AGG | 0.456945 | tig0024143:-47779 | None:intergenic |
| CATTCAAGGACTGACCTCCT+TGG | 0.460684 | tig0024143:+47983 | Msa1414820:CDS |
| AATACATCAACCATGGTGAT+TGG | 0.465857 | tig0024143:-47283 | None:intergenic |
| CATCAATTTCGCATAATGTC+AGG | 0.471424 | tig0024143:+46277 | Msa1414820:exon |
| TTGATCCATCTGAACGCACT+TGG | 0.477811 | tig0024143:+47741 | Msa1414820:CDS |
| TGGTATGTCATCTCAAATCT+TGG | 0.481609 | tig0024143:-47491 | None:intergenic |
| AATAAGCTTGTGTTCTGTAA+TGG | 0.484684 | tig0024143:+47677 | Msa1414820:CDS |
| GTGCTGATGGCCACAATAGT+AGG | 0.487396 | tig0024143:-47581 | None:intergenic |
| TTCCATATGCTACTGACAAA+AGG | 0.491994 | tig0024143:-47656 | None:intergenic |
| CCATCAGCACATGTCACCCT+GGG | 0.492069 | tig0024143:+47594 | Msa1414820:CDS |
| CACACCAAAGAGAGATAACT+AGG | 0.497508 | tig0024143:-50128 | None:intergenic |
| AGACCAGGCCTCAATGGAAT+GGG | 0.506121 | tig0024143:+47907 | Msa1414820:CDS |
| CAGCAGAGACATGATAATCA+AGG | 0.506814 | tig0024143:-50271 | None:intergenic |
| ATGGTTGGTTACTGCTATAC+CGG | 0.507693 | tig0024143:+47411 | Msa1414820:CDS |
| TAGCTCTTCCCATTCCATTG+AGG | 0.512554 | tig0024143:-47915 | None:intergenic |
| CCCAGGGTGACATGTGCTGA+TGG | 0.513422 | tig0024143:-47594 | None:intergenic |
| GTTCACCATGCGTACAGCAT+TGG | 0.515987 | tig0024143:-47261 | None:intergenic |
| TCGTAAGCAGTGGCATGACT+GGG | 0.517661 | tig0024143:+48096 | Msa1414820:CDS |
| ATTCAACTCAGGAAACTCAA+TGG | 0.520817 | tig0024143:-47363 | None:intergenic |
| TAGACCAGGCCTCAATGGAA+TGG | 0.520927 | tig0024143:+47906 | Msa1414820:CDS |
| ACAGTGAACAATACACAGTC+AGG | 0.522970 | tig0024143:-47545 | None:intergenic |
| ATAATTTGGAGCTGCAAACA+TGG | 0.524692 | tig0024143:+47138 | Msa1414820:CDS |
| ACGCTCCAAGTGCGTTCAGA+TGG | 0.530295 | tig0024143:-47746 | None:intergenic |
| CTGACCTCCTTGGAAATATG+AGG | 0.530915 | tig0024143:+47993 | Msa1414820:CDS |
| CAATCCATATGCTTTCAAAA+GGG | 0.538554 | tig0024143:-48129 | None:intergenic |
| AAGCACCACTTCACTATGCA+TGG | 0.542673 | tig0024143:-50316 | None:intergenic |
| TTTGTTACACAAAAGATGGT+TGG | 0.543077 | tig0024143:+47396 | Msa1414820:CDS |
| TATAACATCTCCCTCTTGCT+CGG | 0.543615 | tig0024143:-47840 | None:intergenic |
| GTGACCCACTCAGTTGCCCC+AGG | 0.548400 | tig0024143:-47611 | None:intergenic |
| AATACACAGTCAGGTGATGT+TGG | 0.549189 | tig0024143:-47536 | None:intergenic |
| CAGAAGAGAAGCAACAGAGG+TGG | 0.554810 | tig0024143:+47109 | Msa1414820:CDS |
| ATTGCCTGAGTCTAACGGGT+TGG | 0.555672 | tig0024143:+47708 | Msa1414820:CDS |
| GCATGTTAGTCCTACTATTG+TGG | 0.555933 | tig0024143:+47571 | Msa1414820:CDS |
| TACTGTTCCTCATATTTCCA+AGG | 0.557830 | tig0024143:-48000 | None:intergenic |
| AAGGCAGCATCTTTACGGGC+GGG | 0.561507 | tig0024143:+50189 | Msa1414820:three_prime_UTR |
| AAATTCTCTGGGCATTTGGG+TGG | 0.572307 | tig0024143:-47782 | None:intergenic |
| AAACCCAGACATAAAATGAA+AGG | 0.578262 | tig0024143:-50447 | None:intergenic |
| ACACTCGATCAGTTCTTGGC+CGG | 0.582893 | tig0024143:-47430 | None:intergenic |
| GAAATTTATGACCGAGCAAG+AGG | 0.585940 | tig0024143:+47829 | Msa1414820:CDS |
| TCACCCTGGGGCAACTGAGT+GGG | 0.589444 | tig0024143:+47607 | Msa1414820:CDS |
| CCCAGACATAAAATGAAAGG+TGG | 0.594347 | tig0024143:-50444 | None:intergenic |
| CAGTCATGCCACTGCTTACG+AGG | 0.597324 | tig0024143:-48094 | None:intergenic |
| CTCATTTGGAAGCATGCCGA+AGG | 0.599268 | tig0024143:+50170 | Msa1414820:three_prime_UTR |
| GTCACCCTGGGGCAACTGAG+TGG | 0.599763 | tig0024143:+47606 | Msa1414820:CDS |
| GTGGAAAGTGTTTCAAAGAG+AGG | 0.601346 | tig0024143:-46217 | None:intergenic |
| CTAGCCAACCCGTTAGACTC+AGG | 0.605339 | tig0024143:-47712 | None:intergenic |
| ACTCTAGATCCATTCAACTC+AGG | 0.606054 | tig0024143:-47374 | None:intergenic |
| TTAAGAAAGAGAGAACGAAG+TGG | 0.607026 | tig0024143:-46236 | None:intergenic |
| TTTGGAAAATACATCAACCA+TGG | 0.609449 | tig0024143:-47290 | None:intergenic |
| AATAGGTCCTCCGCTGCACA+GGG | 0.610369 | tig0024143:-47340 | None:intergenic |
| CCAAAATCAGTAATGTGTAG+AGG | 0.611064 | tig0024143:+48211 | Msa1414820:three_prime_UTR |
| TGAATCTGATGCTAAAGACT+AGG | 0.611228 | tig0024143:+50246 | Msa1414820:three_prime_UTR |
| CATATGGATTGAACCACCAA+AGG | 0.612060 | tig0024143:+48141 | Msa1414820:CDS |
| TCTTGCAAACCGCAGAAGCA+CGG | 0.620256 | tig0024143:-47223 | None:intergenic |
| GAGTCTAACGGGTTGGCTAG+GGG | 0.622563 | tig0024143:+47715 | Msa1414820:CDS |
| TCTATGACCCTGTGCAGCGG+AGG | 0.622795 | tig0024143:+47333 | Msa1414820:CDS |
| GAAGGCAGCATCTTTACGGG+CGG | 0.624480 | tig0024143:+50188 | Msa1414820:three_prime_UTR |
| GAGCAGAAGAGAAGCAACAG+AGG | 0.625517 | tig0024143:+47106 | Msa1414820:CDS |
| AGCAGAGACATGATAATCAA+GGG | 0.627265 | tig0024143:-50270 | None:intergenic |
| AGGAGGCTACTTATATGTGA+AGG | 0.630780 | tig0024143:+50220 | Msa1414820:three_prime_UTR |
| GGACAATGTCCGTGCTTCTG+CGG | 0.633574 | tig0024143:+47214 | Msa1414820:CDS |
| TGCTACTGACAAAAGGCAGA+CGG | 0.641521 | tig0024143:-47649 | None:intergenic |
| TGACCCACTCAGTTGCCCCA+GGG | 0.643613 | tig0024143:-47610 | None:intergenic |
| AATTCTATGACCCTGTGCAG+CGG | 0.644847 | tig0024143:+47330 | Msa1414820:CDS |
| TGTTGCCAATGCTGTACGCA+TGG | 0.644907 | tig0024143:+47256 | Msa1414820:CDS |
| AAATTTATGACCGAGCAAGA+GGG | 0.650243 | tig0024143:+47830 | Msa1414820:CDS |
| AGGAGAGAAATGAAAGCACG+TGG | 0.657679 | tig0024143:-46197 | None:intergenic |
| GCTACTATCCTCGTAAGCAG+TGG | 0.662398 | tig0024143:+48086 | Msa1414820:CDS |
| ACGGGCGGGATGTACGTAGG+AGG | 0.673229 | tig0024143:+50203 | Msa1414820:three_prime_UTR |
| CGTAAGCAGTGGCATGACTG+GGG | 0.674467 | tig0024143:+48097 | Msa1414820:CDS |
| TTTACGGGCGGGATGTACGT+AGG | 0.677649 | tig0024143:+50200 | Msa1414820:three_prime_UTR |
| TGTTCCTCATATTTCCAAGG+AGG | 0.678301 | tig0024143:-47997 | None:intergenic |
| TAATTTGGAGCTGCAAACAT+GGG | 0.684242 | tig0024143:+47139 | Msa1414820:CDS |
| TCATTTCTAATAGTTCAGCA+GGG | 0.696179 | tig0024143:-47169 | None:intergenic |
| CATCAGCACATGTCACCCTG+GGG | 0.702309 | tig0024143:+47595 | Msa1414820:CDS |
| GCATGGTGAACCAATCACCA+TGG | 0.715864 | tig0024143:+47273 | Msa1414820:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTATTCACAAT+TGG | + | tig0024143:46922-46941 | Msa1414820:intron | 10.0% |
| !!! | TTTTTTTTTTATTCACAATT+GGG | + | tig0024143:46923-46942 | Msa1414820:intron | 10.0% |
| !!! | TTTTATTCTATTTCATTTTT+TGG | + | tig0024143:50484-50503 | Msa1414820:three_prime_UTR | 10.0% |
| !!! | GAATTAAACTAAATTAGTTT+AGG | + | tig0024143:46679-46698 | Msa1414820:intron | 15.0% |
| !! | AGATGTTACAAAAAAATATA+CGG | - | tig0024143:48676-48695 | None:intergenic | 15.0% |
| !! | AATCTATAGATTTATATAGA+TGG | + | tig0024143:50417-50436 | Msa1414820:three_prime_UTR | 15.0% |
| !! | TAAACTAAATGTGTGAAAAT+TGG | + | tig0024143:46405-46424 | Msa1414820:intron | 20.0% |
| !!! | TGAAAATTGGTTTTTAATGT+TGG | + | tig0024143:46418-46437 | Msa1414820:intron | 20.0% |
| !!! | TTGATGTATTTTCCAAAATT+TGG | + | tig0024143:47296-47315 | Msa1414820:CDS | 20.0% |
| !!! | TTTTCTTTAATCCTTTTACT+CGG | + | tig0024143:47453-47472 | Msa1414820:CDS | 20.0% |
| !!! | AGAATTTTTTCGCAAAAAAT+TGG | + | tig0024143:47798-47817 | Msa1414820:CDS | 20.0% |
| !!! | AAGAATTTTAGTGAAACAAA+TGG | + | tig0024143:48183-48202 | Msa1414820:exon | 20.0% |
| !! | TAACAAGAAGTTATAAAACA+AGG | - | tig0024143:48261-48280 | None:intergenic | 20.0% |
| !! | TTATTCTTATGCTAAGTTAT+AGG | + | tig0024143:48434-48453 | Msa1414820:intron | 20.0% |
| !!! | CATATTTCTGAGTTTAATTT+TGG | - | tig0024143:48621-48640 | None:intergenic | 20.0% |
| !!! | TTCATTTACAACTCTAAAAA+AGG | + | tig0024143:48642-48661 | Msa1414820:intron | 20.0% |
| !! | AATGCACAAACAATAATATT+TGG | - | tig0024143:48887-48906 | None:intergenic | 20.0% |
| !!! | TTGATTTTACATGAATAATC+AGG | + | tig0024143:48969-48988 | Msa1414820:intron | 20.0% |
| !! | ATTGTTTAATGTGAAATGAA+TGG | - | tig0024143:49058-49077 | None:intergenic | 20.0% |
| !! | AAAGAAGGAAAAATAACTAT+TGG | + | tig0024143:49126-49145 | Msa1414820:intron | 20.0% |
| !! | AAGAAGGAAAAATAACTATT+GGG | + | tig0024143:49127-49146 | Msa1414820:intron | 20.0% |
| !! | AAACTATAGGAGAAATTATT+AGG | + | tig0024143:49314-49333 | Msa1414820:intron | 20.0% |
| !!! | CTTAATGCATTTTGTAATTT+TGG | + | tig0024143:49556-49575 | Msa1414820:intron | 20.0% |
| !!! | ATTTAGCAGATTTTTAAAGT+TGG | + | tig0024143:49871-49890 | Msa1414820:intron | 20.0% |
| !!! | ACTTATACCATTTTTTAACT+AGG | + | tig0024143:49977-49996 | Msa1414820:intron | 20.0% |
| !!! | CTTATACCATTTTTTAACTA+GGG | + | tig0024143:49978-49997 | Msa1414820:intron | 20.0% |
| !!! | ATGTTTGATTTGGTTATATA+GGG | - | tig0024143:50610-50629 | None:intergenic | 20.0% |
| !!! | AATGTTTGATTTGGTTATAT+AGG | - | tig0024143:50611-50630 | None:intergenic | 20.0% |
| !! | AAGAATACTAATGTTTGATT+TGG | - | tig0024143:50620-50639 | None:intergenic | 20.0% |
| !! | TTTATCACATTGATTGCATT+AGG | + | tig0024143:46540-46559 | Msa1414820:intron | 25.0% |
| !! | TTATCACATTGATTGCATTA+GGG | + | tig0024143:46541-46560 | Msa1414820:intron | 25.0% |
| !! | ACATATGACTTTTACATGAT+TGG | + | tig0024143:46735-46754 | Msa1414820:intron | 25.0% |
| ! | GATAACATAACATAACAACT+AGG | - | tig0024143:46894-46913 | None:intergenic | 25.0% |
| ! | ACATGCATTTCTGATTATTT+AGG | + | tig0024143:47063-47082 | Msa1414820:intron | 25.0% |
| !! | TTTCTTTAATCCTTTTACTC+GGG | + | tig0024143:47454-47473 | Msa1414820:CDS | 25.0% |
| !! | TTTTTGCGAAAAAATTCTCT+GGG | - | tig0024143:47796-47815 | None:intergenic | 25.0% |
| !!! | TTTTTTGCGAAAAAATTCTC+TGG | - | tig0024143:47797-47816 | None:intergenic | 25.0% |
| !!! | ATTTTTTCGCAAAAAATTGG+TGG | + | tig0024143:47801-47820 | Msa1414820:CDS | 25.0% |
| ! | GGTCTAACTTGAAAATAATA+GGG | - | tig0024143:47892-47911 | None:intergenic | 25.0% |
| ! | TGGTCTAACTTGAAAATAAT+AGG | - | tig0024143:47893-47912 | None:intergenic | 25.0% |
| !!! | TATTATTTTCAAGTTAGACC+AGG | + | tig0024143:47892-47911 | Msa1414820:CDS | 25.0% |
| !!! | TTCTCTAAAGTTCGTTTTTA+TGG | + | tig0024143:48028-48047 | Msa1414820:CDS | 25.0% |
| ! | ATGCATAATAAGCTAGTATA+TGG | + | tig0024143:48295-48314 | Msa1414820:intron | 25.0% |
| !! | TAACAGTTCATCAACATTTT+TGG | + | tig0024143:48344-48363 | Msa1414820:intron | 25.0% |
| ! | TGTCATCTCATTATAATAGT+TGG | + | tig0024143:48508-48527 | Msa1414820:intron | 25.0% |
| !! | TACAAGAGCTTTTATGTAAA+AGG | - | tig0024143:48750-48769 | None:intergenic | 25.0% |
| ! | ATTTATTTAAGAGAGATGAC+TGG | + | tig0024143:48918-48937 | Msa1414820:intron | 25.0% |
| ! | AGAAGGAAAAATAACTATTG+GGG | + | tig0024143:49128-49147 | Msa1414820:intron | 25.0% |
| !!! | TTTTCTTGTTGTACAAAAGA+TGG | + | tig0024143:49187-49206 | Msa1414820:intron | 25.0% |
| ! | AATCTATACAGATCAAACAA+TGG | - | tig0024143:49396-49415 | None:intergenic | 25.0% |
| ! | AACTTACAATGTTAAGAAGA+AGG | + | tig0024143:49493-49512 | Msa1414820:intron | 25.0% |
| !! | ATAACAAAAACACAAGTTGA+CGG | + | tig0024143:49516-49535 | Msa1414820:intron | 25.0% |
| ! | GAAGAAATTAACAATGACAA+GGG | + | tig0024143:49578-49597 | Msa1414820:intron | 25.0% |
| !! | ACTAGATTTACAAATTTGCT+AGG | - | tig0024143:49647-49666 | None:intergenic | 25.0% |
| ! | GTTAAACTCAAAGTATAAGT+TGG | - | tig0024143:49700-49719 | None:intergenic | 25.0% |
| !! | ACTTATACTTTGAGTTTAAC+TGG | + | tig0024143:49700-49719 | Msa1414820:intron | 25.0% |
| ! | AGAGGAAAATCTAAACAAAA+TGG | - | tig0024143:49749-49768 | None:intergenic | 25.0% |
| !! | TTTTATTCTTTGTACATCAG+AGG | - | tig0024143:49791-49810 | None:intergenic | 25.0% |
| !!! | AGCTTTGTTGACATTTAATT+TGG | + | tig0024143:50388-50407 | Msa1414820:three_prime_UTR | 25.0% |
| !!! | TTCATTTTTTGGTACAAAAG+AGG | + | tig0024143:50495-50514 | Msa1414820:three_prime_UTR | 25.0% |
| !!! | TCATTTTTTGGTACAAAAGA+GGG | + | tig0024143:50496-50515 | Msa1414820:three_prime_UTR | 25.0% |
| ATTGATTGCATTAGGGTTTA+TGG | + | tig0024143:46548-46567 | Msa1414820:intron | 30.0% | |
| !! | TTTTACATGATTGGTTGTGA+TGG | + | tig0024143:46744-46763 | Msa1414820:intron | 30.0% |
| AAACCAAGCTCATTAATTGA+TGG | + | tig0024143:46805-46824 | Msa1414820:intron | 30.0% | |
| AACCAAGCTCATTAATTGAT+GGG | + | tig0024143:46806-46825 | Msa1414820:intron | 30.0% | |
| ! | TTTTATTCACAATTGGGAAG+TGG | + | tig0024143:46929-46948 | Msa1414820:intron | 30.0% |
| AATGCTCTTAAAATGCAACA+AGG | - | tig0024143:47016-47035 | None:intergenic | 30.0% | |
| AGAGGTGGAAAATGATAATT+TGG | + | tig0024143:47124-47143 | Msa1414820:CDS | 30.0% | |
| TCATTTCTAATAGTTCAGCA+GGG | - | tig0024143:47172-47191 | None:intergenic | 30.0% | |
| ATCATTTCTAATAGTTCAGC+AGG | - | tig0024143:47173-47192 | None:intergenic | 30.0% | |
| TTTGGAAAATACATCAACCA+TGG | - | tig0024143:47293-47312 | None:intergenic | 30.0% | |
| ! | ATTTTCCAAAATTTGGTCAG+TGG | + | tig0024143:47303-47322 | Msa1414820:CDS | 30.0% |
| !! | AGAGTTTGTTACACAAAAGA+TGG | + | tig0024143:47392-47411 | Msa1414820:CDS | 30.0% |
| TTTGTTACACAAAAGATGGT+TGG | + | tig0024143:47396-47415 | Msa1414820:CDS | 30.0% | |
| AATAAGCTTGTGTTCTGTAA+TGG | + | tig0024143:47677-47696 | Msa1414820:CDS | 30.0% | |
| AAAAAATTCTCTGGGCATTT+GGG | - | tig0024143:47788-47807 | None:intergenic | 30.0% | |
| CAATCCATATGCTTTCAAAA+GGG | - | tig0024143:48132-48151 | None:intergenic | 30.0% | |
| TCAATCCATATGCTTTCAAA+AGG | - | tig0024143:48133-48152 | None:intergenic | 30.0% | |
| !! | TAGAGGTATTTGTTATCACT+TGG | + | tig0024143:48228-48247 | Msa1414820:intron | 30.0% |
| ATAGTGTACAATAGTATGAG+TGG | - | tig0024143:48473-48492 | None:intergenic | 30.0% | |
| GTTATGACCAAAACTGAAAT+GGG | - | tig0024143:48699-48718 | None:intergenic | 30.0% | |
| AGTTATGACCAAAACTGAAA+TGG | - | tig0024143:48700-48719 | None:intergenic | 30.0% | |
| !! | GCTAGTCAGTATTTTTGAAA+TGG | + | tig0024143:48773-48792 | Msa1414820:intron | 30.0% |
| !!! | TCAGTATTTTTGAAATGGCT+TGG | + | tig0024143:48778-48797 | Msa1414820:intron | 30.0% |
| TAATATTTGGCAGTTTAACC+TGG | - | tig0024143:48874-48893 | None:intergenic | 30.0% | |
| AACCAAGAATAAGACATTCT+TGG | - | tig0024143:49169-49188 | None:intergenic | 30.0% | |
| AGATGGTTTAATCTCAACTT+AGG | + | tig0024143:49204-49223 | Msa1414820:intron | 30.0% | |
| GACATGTAGATTCTATAGTA+TGG | + | tig0024143:49249-49268 | Msa1414820:intron | 30.0% | |
| GGAAAGGAAAGAAAAACTAT+AGG | + | tig0024143:49301-49320 | Msa1414820:intron | 30.0% | |
| AATTATTAGGAAAGACCTGA+AGG | + | tig0024143:49327-49346 | Msa1414820:intron | 30.0% | |
| TGTATAGATTATTCCACCTA+AGG | + | tig0024143:49406-49425 | Msa1414820:intron | 30.0% | |
| ! | TAACAAAAACACAAGTTGAC+GGG | + | tig0024143:49517-49536 | Msa1414820:intron | 30.0% |
| TACAAAATGCATTAAGAGCT+CGG | - | tig0024143:49552-49571 | None:intergenic | 30.0% | |
| GGAAGAAATTAACAATGACA+AGG | + | tig0024143:49577-49596 | Msa1414820:intron | 30.0% | |
| ACATTTAATATACGCCTTCT+AGG | - | tig0024143:49613-49632 | None:intergenic | 30.0% | |
| !! | AGATTTACAAATTTGCTAGG+TGG | - | tig0024143:49644-49663 | None:intergenic | 30.0% |
| CAAAATGGTGCAATTAATAG+TGG | - | tig0024143:49734-49753 | None:intergenic | 30.0% | |
| TCAAGTCCCTAGTTAAAAAA+TGG | - | tig0024143:49987-50006 | None:intergenic | 30.0% | |
| TAGTCAATCTATGAAACTCT+CGG | + | tig0024143:50007-50026 | Msa1414820:intron | 30.0% | |
| GTTCATTAGTTAAGCTCATT+TGG | + | tig0024143:50156-50175 | Msa1414820:three_prime_UTR | 30.0% | |
| GCTTATATATGCAGAACAAT+TGG | + | tig0024143:50335-50354 | Msa1414820:three_prime_UTR | 30.0% | |
| AAACCCAGACATAAAATGAA+AGG | - | tig0024143:50450-50469 | None:intergenic | 30.0% | |
| TTAAGAAAGAGAGAACGAAG+TGG | - | tig0024143:46239-46258 | None:intergenic | 35.0% | |
| CATCAATTTCGCATAATGTC+AGG | + | tig0024143:46277-46296 | Msa1414820:exon | 35.0% | |
| AATTGGGAAGTGGAAGAATA+TGG | + | tig0024143:46939-46958 | Msa1414820:intron | 35.0% | |
| !!! | GCATTTTAAGAGCATTCAAG+TGG | + | tig0024143:47020-47039 | Msa1414820:intron | 35.0% |
| ! | AGCATTCAAGTGGATTTGTT+CGG | + | tig0024143:47030-47049 | Msa1414820:intron | 35.0% |
| ! | ATAATTTGGAGCTGCAAACA+TGG | + | tig0024143:47138-47157 | Msa1414820:CDS | 35.0% |
| ! | TAATTTGGAGCTGCAAACAT+GGG | + | tig0024143:47139-47158 | Msa1414820:CDS | 35.0% |
| AATACATCAACCATGGTGAT+TGG | - | tig0024143:47286-47305 | None:intergenic | 35.0% | |
| ! | TCATACCACTGACCAAATTT+TGG | - | tig0024143:47311-47330 | None:intergenic | 35.0% |
| ATTCAACTCAGGAAACTCAA+TGG | - | tig0024143:47366-47385 | None:intergenic | 35.0% | |
| ! | ATTGAGTTTCCTGAGTTGAA+TGG | + | tig0024143:47365-47384 | Msa1414820:CDS | 35.0% |
| AAAAACACTCGATCAGTTCT+TGG | - | tig0024143:47437-47456 | None:intergenic | 35.0% | |
| TGGTATGTCATCTCAAATCT+TGG | - | tig0024143:47494-47513 | None:intergenic | 35.0% | |
| TTCCATATGCTACTGACAAA+AGG | - | tig0024143:47659-47678 | None:intergenic | 35.0% | |
| ! | CTTTTATTGCCTGAGTCTAA+CGG | + | tig0024143:47703-47722 | Msa1414820:CDS | 35.0% |
| ! | TTTTATTGCCTGAGTCTAAC+GGG | + | tig0024143:47704-47723 | Msa1414820:CDS | 35.0% |
| GAAAAAATTCTCTGGGCATT+TGG | - | tig0024143:47789-47808 | None:intergenic | 35.0% | |
| TTTCGCAAAAAATTGGTGGA+AGG | + | tig0024143:47805-47824 | Msa1414820:CDS | 35.0% | |
| TTCGCAAAAAATTGGTGGAA+GGG | + | tig0024143:47806-47825 | Msa1414820:CDS | 35.0% | |
| AAATTTATGACCGAGCAAGA+GGG | + | tig0024143:47830-47849 | Msa1414820:CDS | 35.0% | |
| GAAGAGCTAAAAACACTAGA+TGG | + | tig0024143:47929-47948 | Msa1414820:CDS | 35.0% | |
| GTTTCTTGTCTTCTCATTCA+AGG | + | tig0024143:47969-47988 | Msa1414820:CDS | 35.0% | |
| TACTGTTCCTCATATTTCCA+AGG | - | tig0024143:48003-48022 | None:intergenic | 35.0% | |
| !! | AAGACCCTTTTGAAAGCATA+TGG | + | tig0024143:48125-48144 | Msa1414820:CDS | 35.0% |
| AATCCAGAAAAATCCTTTGG+TGG | - | tig0024143:48157-48176 | None:intergenic | 35.0% | |
| GAGAATCCAGAAAAATCCTT+TGG | - | tig0024143:48160-48179 | None:intergenic | 35.0% | |
| !!! | CCTCTACACATTACTGATTT+TGG | - | tig0024143:48214-48233 | None:intergenic | 35.0% |
| CCAAAATCAGTAATGTGTAG+AGG | + | tig0024143:48211-48230 | Msa1414820:three_prime_UTR | 35.0% | |
| ! | AACATCTCCCATTTCAGTTT+TGG | + | tig0024143:48689-48708 | Msa1414820:intron | 35.0% |
| !! | AAGAGAGATGACTGGTTTAT+TGG | + | tig0024143:48926-48945 | Msa1414820:intron | 35.0% |
| !! | AGAGAGATGACTGGTTTATT+GGG | + | tig0024143:48927-48946 | Msa1414820:intron | 35.0% |
| TCTGCCTAACTTTCTTAGTA+GGG | + | tig0024143:49094-49113 | Msa1414820:intron | 35.0% | |
| ! | AGCCAAGAATGTCTTATTCT+TGG | + | tig0024143:49164-49183 | Msa1414820:intron | 35.0% |
| TGGTTTAATCTCAACTTAGG+TGG | + | tig0024143:49207-49226 | Msa1414820:intron | 35.0% | |
| TAATCTCAACTTAGGTGGTT+TGG | + | tig0024143:49212-49231 | Msa1414820:intron | 35.0% | |
| AATCTCAACTTAGGTGGTTT+GGG | + | tig0024143:49213-49232 | Msa1414820:intron | 35.0% | |
| GATTCTATAGTATGGAGACT+TGG | + | tig0024143:49257-49276 | Msa1414820:intron | 35.0% | |
| GAAATTAACAATGACAAGGG+AGG | + | tig0024143:49581-49600 | Msa1414820:intron | 35.0% | |
| ! | CTCAAAGTATAAGTTGGCTT+TGG | - | tig0024143:49694-49713 | None:intergenic | 35.0% |
| GTACTCAGTTAAATACTGAG+AGG | - | tig0024143:49767-49786 | None:intergenic | 35.0% | |
| TAATGTGCCAACTTTGTGAT+TGG | + | tig0024143:49903-49922 | Msa1414820:intron | 35.0% | |
| ATGGAATCCAATCACAAAGT+TGG | - | tig0024143:49913-49932 | None:intergenic | 35.0% | |
| AGTTCCTAGTTATCTCTCTT+TGG | + | tig0024143:50124-50143 | Msa1414820:three_prime_UTR | 35.0% | |
| TGAATCTGATGCTAAAGACT+AGG | + | tig0024143:50246-50265 | Msa1414820:three_prime_UTR | 35.0% | |
| AGCAGAGACATGATAATCAA+GGG | - | tig0024143:50273-50292 | None:intergenic | 35.0% | |
| ! | TTTTTCCATGCATAGTGAAG+TGG | + | tig0024143:50311-50330 | Msa1414820:three_prime_UTR | 35.0% |
| ! | TCCACCTTTCATTTTATGTC+TGG | + | tig0024143:50443-50462 | Msa1414820:three_prime_UTR | 35.0% |
| ! | CCACCTTTCATTTTATGTCT+GGG | + | tig0024143:50444-50463 | Msa1414820:three_prime_UTR | 35.0% |
| GGCTGCATAAATTTGATGTT+TGG | + | tig0024143:50517-50536 | Msa1414820:three_prime_UTR | 35.0% | |
| !! | GTGGAAAGTGTTTCAAAGAG+AGG | - | tig0024143:46220-46239 | None:intergenic | 40.0% |
| TGTTGGATCTCTGTGTAGAA+TGG | + | tig0024143:46435-46454 | Msa1414820:intron | 40.0% | |
| CACCCATCAATTAATGAGCT+TGG | - | tig0024143:46811-46830 | None:intergenic | 40.0% | |
| !! | CATATCTCGTTTAGCCTTAG+AGG | + | tig0024143:47193-47212 | Msa1414820:CDS | 40.0% |
| CTCAGGAAACTCAATGGAAT+AGG | - | tig0024143:47360-47379 | None:intergenic | 40.0% | |
| ACTCTAGATCCATTCAACTC+AGG | - | tig0024143:47377-47396 | None:intergenic | 40.0% | |
| ! | ATGGTTGGTTACTGCTATAC+CGG | + | tig0024143:47411-47430 | Msa1414820:CDS | 40.0% |
| ! | TTGATAGTCTCCCGAGTAAA+AGG | - | tig0024143:47467-47486 | None:intergenic | 40.0% |
| AATACACAGTCAGGTGATGT+TGG | - | tig0024143:47539-47558 | None:intergenic | 40.0% | |
| ACAGTGAACAATACACAGTC+AGG | - | tig0024143:47548-47567 | None:intergenic | 40.0% | |
| GCATGTTAGTCCTACTATTG+TGG | + | tig0024143:47571-47590 | Msa1414820:CDS | 40.0% | |
| ! | TGCCTTTTGTCAGTAGCATA+TGG | + | tig0024143:47654-47673 | Msa1414820:CDS | 40.0% |
| TCGCAAAAAATTGGTGGAAG+GGG | + | tig0024143:47807-47826 | Msa1414820:CDS | 40.0% | |
| GAAATTTATGACCGAGCAAG+AGG | + | tig0024143:47829-47848 | Msa1414820:CDS | 40.0% | |
| TATAACATCTCCCTCTTGCT+CGG | - | tig0024143:47843-47862 | None:intergenic | 40.0% | |
| TGTTCCTCATATTTCCAAGG+AGG | - | tig0024143:48000-48019 | None:intergenic | 40.0% | |
| ! | CATATGGATTGAACCACCAA+AGG | + | tig0024143:48141-48160 | Msa1414820:CDS | 40.0% |
| ! | GAACCACCAAAGGATTTTTC+TGG | + | tig0024143:48151-48170 | Msa1414820:CDS | 40.0% |
| TGAATCCTAGATTACACTGC+AGG | - | tig0024143:48406-48425 | None:intergenic | 40.0% | |
| TTTCCAAAGCCGATGATGAT+GGG | - | tig0024143:48837-48856 | None:intergenic | 40.0% | |
| ! | TTTTCCAAAGCCGATGATGA+TGG | - | tig0024143:48838-48857 | None:intergenic | 40.0% |
| !! | TCGGCTTTGGAAAAGAGAAA+AGG | + | tig0024143:48844-48863 | Msa1414820:intron | 40.0% |
| !! | CGGCTTTGGAAAAGAGAAAA+GGG | + | tig0024143:48845-48864 | Msa1414820:intron | 40.0% |
| GAAAAGAGAAAAGGGATTCC+AGG | + | tig0024143:48853-48872 | Msa1414820:intron | 40.0% | |
| GTCTGCCTAACTTTCTTAGT+AGG | + | tig0024143:49093-49112 | Msa1414820:intron | 40.0% | |
| CCTAACTTTCTTAGTAGGGA+GGG | + | tig0024143:49098-49117 | Msa1414820:intron | 40.0% | |
| CTAACTTTCTTAGTAGGGAG+GGG | + | tig0024143:49099-49118 | Msa1414820:intron | 40.0% | |
| !! | GACTTGGAGAGAGTATTAGA+TGG | + | tig0024143:49273-49292 | Msa1414820:intron | 40.0% |
| !! | TTGGAGAGAGTATTAGATGG+AGG | + | tig0024143:49276-49295 | Msa1414820:intron | 40.0% |
| !! | TGGAGAGAGTATTAGATGGA+GGG | + | tig0024143:49277-49296 | Msa1414820:intron | 40.0% |
| CATCAAAACCATTGACCTTC+AGG | - | tig0024143:49345-49364 | None:intergenic | 40.0% | |
| AGATTATTCCACCTAAGGCT+TGG | + | tig0024143:49411-49430 | Msa1414820:intron | 40.0% | |
| !! | TGCTGCCTGCTTTTCTTTTT+TGG | + | tig0024143:49444-49463 | Msa1414820:intron | 40.0% |
| !! | GCTGCCTGCTTTTCTTTTTT+GGG | + | tig0024143:49445-49464 | Msa1414820:intron | 40.0% |
| CTCTCCCAAAAAAGAAAAGC+AGG | - | tig0024143:49452-49471 | None:intergenic | 40.0% | |
| !!! | TTCTTTTTTGGGAGAGAGAG+AGG | + | tig0024143:49456-49475 | Msa1414820:intron | 40.0% |
| TTTGGTTACACGACAAAGTC+AGG | - | tig0024143:49676-49695 | None:intergenic | 40.0% | |
| TTCTGAGTAGTCAGAATTGC+TGG | - | tig0024143:49820-49839 | None:intergenic | 40.0% | |
| GACTACTCAGAAAACCTTGT+TGG | + | tig0024143:49828-49847 | Msa1414820:intron | 40.0% | |
| ! | AGCACTGTTTAGTTCCAACA+AGG | - | tig0024143:49845-49864 | None:intergenic | 40.0% |
| CAATCTATGAAACTCTCGGT+TGG | + | tig0024143:50011-50030 | Msa1414820:intron | 40.0% | |
| CACACCAAAGAGAGATAACT+AGG | - | tig0024143:50131-50150 | None:intergenic | 40.0% | |
| AGGAGGCTACTTATATGTGA+AGG | + | tig0024143:50220-50239 | Msa1414820:three_prime_UTR | 40.0% | |
| CAGCAGAGACATGATAATCA+AGG | - | tig0024143:50274-50293 | None:intergenic | 40.0% | |
| CCCAGACATAAAATGAAAGG+TGG | - | tig0024143:50447-50466 | None:intergenic | 40.0% | |
| ! | AGGAGAGAAATGAAAGCACG+TGG | - | tig0024143:46200-46219 | None:intergenic | 45.0% |
| TGGATCTCTGTGTAGAATGG+TGG | + | tig0024143:46438-46457 | Msa1414820:intron | 45.0% | |
| AATTCTATGACCCTGTGCAG+CGG | + | tig0024143:47330-47349 | Msa1414820:CDS | 45.0% | |
| CACAAGAGAACGCAACTATC+TGG | - | tig0024143:47514-47533 | None:intergenic | 45.0% | |
| ! | TGACAAAAGGCAGACGGTTT+TGG | - | tig0024143:47646-47665 | None:intergenic | 45.0% |
| TGCTACTGACAAAAGGCAGA+CGG | - | tig0024143:47652-47671 | None:intergenic | 45.0% | |
| TTGATCCATCTGAACGCACT+TGG | + | tig0024143:47741-47760 | Msa1414820:CDS | 45.0% | |
| !! | ACGCACTTGGAGCGTTTTAT+CGG | + | tig0024143:47754-47773 | Msa1414820:CDS | 45.0% |
| AAATTCTCTGGGCATTTGGG+TGG | - | tig0024143:47785-47804 | None:intergenic | 45.0% | |
| TAGCTCTTCCCATTCCATTG+AGG | - | tig0024143:47918-47937 | None:intergenic | 45.0% | |
| CTGACCTCCTTGGAAATATG+AGG | + | tig0024143:47993-48012 | Msa1414820:CDS | 45.0% | |
| TGCTACCTGCAGTGTAATCT+AGG | + | tig0024143:48398-48417 | Msa1414820:intron | 45.0% | |
| CTAACCATGCCCATCATCAT+CGG | + | tig0024143:48825-48844 | Msa1414820:intron | 45.0% | |
| GCCTAACTTTCTTAGTAGGG+AGG | + | tig0024143:49097-49116 | Msa1414820:intron | 45.0% | |
| CCCTCCCTACTAAGAAAGTT+AGG | - | tig0024143:49101-49120 | None:intergenic | 45.0% | |
| !! | AGAGAGTATTAGATGGAGGG+TGG | + | tig0024143:49280-49299 | Msa1414820:intron | 45.0% |
| GTATTAGATGGAGGGTGGAA+AGG | + | tig0024143:49285-49304 | Msa1414820:intron | 45.0% | |
| AGGAAAGACCTGAAGGTCAA+TGG | + | tig0024143:49334-49353 | Msa1414820:intron | 45.0% | |
| AAGGGAGGATAAAGCCTAGA+AGG | + | tig0024143:49596-49615 | Msa1414820:intron | 45.0% | |
| CCAGTTCAGCTGTAAAAGCA+TGG | - | tig0024143:49932-49951 | None:intergenic | 45.0% | |
| ! | CCATGCTTTTACAGCTGAAC+TGG | + | tig0024143:49929-49948 | Msa1414820:intron | 45.0% |
| !! | GGAACTCTGAAATTGCAGCA+TGG | - | tig0024143:50110-50129 | None:intergenic | 45.0% |
| AAGCACCACTTCACTATGCA+TGG | - | tig0024143:50319-50338 | None:intergenic | 45.0% | |
| GAGCAGAAGAGAAGCAACAG+AGG | + | tig0024143:47106-47125 | Msa1414820:CDS | 50.0% | |
| CAGAAGAGAAGCAACAGAGG+TGG | + | tig0024143:47109-47128 | Msa1414820:CDS | 50.0% | |
| AGCACGGACATTGTCCTCTA+AGG | - | tig0024143:47210-47229 | None:intergenic | 50.0% | |
| TCTTGCAAACCGCAGAAGCA+CGG | - | tig0024143:47226-47245 | None:intergenic | 50.0% | |
| CTTCTGCGGTTTGCAAGAGT+TGG | + | tig0024143:47228-47247 | Msa1414820:CDS | 50.0% | |
| TGTTGCCAATGCTGTACGCA+TGG | + | tig0024143:47256-47275 | Msa1414820:CDS | 50.0% | |
| GTTCACCATGCGTACAGCAT+TGG | - | tig0024143:47264-47283 | None:intergenic | 50.0% | |
| GCATGGTGAACCAATCACCA+TGG | + | tig0024143:47273-47292 | Msa1414820:CDS | 50.0% | |
| ACACTCGATCAGTTCTTGGC+CGG | - | tig0024143:47433-47452 | None:intergenic | 50.0% | |
| ! | GTGCTGATGGCCACAATAGT+AGG | - | tig0024143:47584-47603 | None:intergenic | 50.0% |
| ! | ATTGCCTGAGTCTAACGGGT+TGG | + | tig0024143:47708-47727 | Msa1414820:CDS | 50.0% |
| !! | TGAGTCTAACGGGTTGGCTA+GGG | + | tig0024143:47714-47733 | Msa1414820:CDS | 50.0% |
| CAAGTTAGACCAGGCCTCAA+TGG | + | tig0024143:47901-47920 | Msa1414820:CDS | 50.0% | |
| TAGACCAGGCCTCAATGGAA+TGG | + | tig0024143:47906-47925 | Msa1414820:CDS | 50.0% | |
| AGACCAGGCCTCAATGGAAT+GGG | + | tig0024143:47907-47926 | Msa1414820:CDS | 50.0% | |
| CATTCAAGGACTGACCTCCT+TGG | + | tig0024143:47983-48002 | Msa1414820:CDS | 50.0% | |
| GCTACTATCCTCGTAAGCAG+TGG | + | tig0024143:48086-48105 | Msa1414820:CDS | 50.0% | |
| TCGTAAGCAGTGGCATGACT+GGG | + | tig0024143:48096-48115 | Msa1414820:CDS | 50.0% | |
| !! | AAAGCCGATGATGATGGGCA+TGG | - | tig0024143:48832-48851 | None:intergenic | 50.0% |
| !! | ATGCCCATCATCATCGGCTT+TGG | + | tig0024143:48831-48850 | Msa1414820:intron | 50.0% |
| GTAGGGAGGGGAAGAAAAGA+AGG | + | tig0024143:49111-49130 | Msa1414820:intron | 50.0% | |
| ! | TTAGGTGGTTTGGGCATCTG+TGG | + | tig0024143:49222-49241 | Msa1414820:intron | 50.0% |
| GACAACAACCAAGCCTTAGG+TGG | - | tig0024143:49422-49441 | None:intergenic | 50.0% | |
| AGCGACAACAACCAAGCCTT+AGG | - | tig0024143:49425-49444 | None:intergenic | 50.0% | |
| !! | TTTTGGGAGAGAGAGAGGAG+AGG | + | tig0024143:49461-49480 | Msa1414820:intron | 50.0% |
| ! | AAAACACAAGTTGACGGGCC+AGG | + | tig0024143:49522-49541 | Msa1414820:intron | 50.0% |
| ! | AAACACAAGTTGACGGGCCA+GGG | + | tig0024143:49523-49542 | Msa1414820:intron | 50.0% |
| ! | CTCATTTGGAAGCATGCCGA+AGG | + | tig0024143:50170-50189 | Msa1414820:three_prime_UTR | 50.0% |
| TGCCGAAGGCAGCATCTTTA+CGG | + | tig0024143:50184-50203 | Msa1414820:three_prime_UTR | 50.0% | |
| GGACAATGTCCGTGCTTCTG+CGG | + | tig0024143:47214-47233 | Msa1414820:CDS | 55.0% | |
| AATAGGTCCTCCGCTGCACA+GGG | - | tig0024143:47343-47362 | None:intergenic | 55.0% | |
| CCATCAGCACATGTCACCCT+GGG | + | tig0024143:47594-47613 | Msa1414820:CDS | 55.0% | |
| CATCAGCACATGTCACCCTG+GGG | + | tig0024143:47595-47614 | Msa1414820:CDS | 55.0% | |
| CTAGCCAACCCGTTAGACTC+AGG | - | tig0024143:47715-47734 | None:intergenic | 55.0% | |
| !! | CTGAGTCTAACGGGTTGGCT+AGG | + | tig0024143:47713-47732 | Msa1414820:CDS | 55.0% |
| !! | GAGTCTAACGGGTTGGCTAG+GGG | + | tig0024143:47715-47734 | Msa1414820:CDS | 55.0% |
| ACGCTCCAAGTGCGTTCAGA+TGG | - | tig0024143:47749-47768 | None:intergenic | 55.0% | |
| TTCTCTGGGCATTTGGGTGG+AGG | - | tig0024143:47782-47801 | None:intergenic | 55.0% | |
| CTTCCCATTCCATTGAGGCC+TGG | - | tig0024143:47913-47932 | None:intergenic | 55.0% | |
| CAGTCATGCCACTGCTTACG+AGG | - | tig0024143:48097-48116 | None:intergenic | 55.0% | |
| CTCGTAAGCAGTGGCATGAC+TGG | + | tig0024143:48095-48114 | Msa1414820:CDS | 55.0% | |
| CGTAAGCAGTGGCATGACTG+GGG | + | tig0024143:48097-48116 | Msa1414820:CDS | 55.0% | |
| CATTAAGAGCTCGGAAGCCC+TGG | - | tig0024143:49543-49562 | None:intergenic | 55.0% | |
| GCCGAAGGCAGCATCTTTAC+GGG | + | tig0024143:50185-50204 | Msa1414820:three_prime_UTR | 55.0% | |
| GCCCGTAAAGATGCTGCCTT+CGG | - | tig0024143:50189-50208 | None:intergenic | 55.0% | |
| GAAGGCAGCATCTTTACGGG+CGG | + | tig0024143:50188-50207 | Msa1414820:three_prime_UTR | 55.0% | |
| AAGGCAGCATCTTTACGGGC+GGG | + | tig0024143:50189-50208 | Msa1414820:three_prime_UTR | 55.0% | |
| TTTACGGGCGGGATGTACGT+AGG | + | tig0024143:50200-50219 | Msa1414820:three_prime_UTR | 55.0% | |
| TCTATGACCCTGTGCAGCGG+AGG | + | tig0024143:47333-47352 | Msa1414820:CDS | 60.0% | |
| GAATAGGTCCTCCGCTGCAC+AGG | - | tig0024143:47344-47363 | None:intergenic | 60.0% | |
| GCCATCAGCACATGTCACCC+TGG | + | tig0024143:47593-47612 | Msa1414820:CDS | 60.0% | |
| CCCAGGGTGACATGTGCTGA+TGG | - | tig0024143:47597-47616 | None:intergenic | 60.0% | |
| TCACCCTGGGGCAACTGAGT+GGG | + | tig0024143:47607-47626 | Msa1414820:CDS | 60.0% | |
| TGACCCACTCAGTTGCCCCA+GGG | - | tig0024143:47613-47632 | None:intergenic | 60.0% | |
| TGGGAGAGAGAGAGGAGAGG+AGG | + | tig0024143:49464-49483 | Msa1414820:intron | 60.0% | |
| GGGAGAGAGAGAGGAGAGGA+GGG | + | tig0024143:49465-49484 | Msa1414820:intron | 60.0% | |
| GGAGAGAGAGAGGAGAGGAG+GGG | + | tig0024143:49466-49485 | Msa1414820:intron | 60.0% | |
| GAGAGAGAGAGGAGAGGAGG+GGG | + | tig0024143:49467-49486 | Msa1414820:intron | 60.0% | |
| GTCACCCTGGGGCAACTGAG+TGG | + | tig0024143:47606-47625 | Msa1414820:CDS | 65.0% | |
| GTGACCCACTCAGTTGCCCC+AGG | - | tig0024143:47614-47633 | None:intergenic | 65.0% | |
| ACGGGCGGGATGTACGTAGG+AGG | + | tig0024143:50203-50222 | Msa1414820:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024143 | gene | 46197 | 50669 | 46197 | ID=Msa1414820;Name=Msa1414820 |
| tig0024143 | mRNA | 46197 | 50669 | 46197 | ID=Msa1414820-mRNA-1;Parent=Msa1414820;Name=Msa1414820-mRNA-1;_AED=0.25;_eAED=0.25;_QI=95|1|1|1|0.5|0.33|3|595|376 |
| tig0024143 | exon | 46197 | 46323 | 46197 | ID=Msa1414820-mRNA-1:exon:22007;Parent=Msa1414820-mRNA-1 |
| tig0024143 | exon | 47085 | 48232 | 47085 | ID=Msa1414820-mRNA-1:exon:22008;Parent=Msa1414820-mRNA-1 |
| tig0024143 | exon | 50124 | 50669 | 50124 | ID=Msa1414820-mRNA-1:exon:22009;Parent=Msa1414820-mRNA-1 |
| tig0024143 | five_prime_UTR | 46197 | 46291 | 46197 | ID=Msa1414820-mRNA-1:five_prime_utr;Parent=Msa1414820-mRNA-1 |
| tig0024143 | CDS | 46292 | 46323 | 46292 | ID=Msa1414820-mRNA-1:cds;Parent=Msa1414820-mRNA-1 |
| tig0024143 | CDS | 47085 | 48183 | 47085 | ID=Msa1414820-mRNA-1:cds;Parent=Msa1414820-mRNA-1 |
| tig0024143 | three_prime_UTR | 48184 | 48232 | 48184 | ID=Msa1414820-mRNA-1:three_prime_utr;Parent=Msa1414820-mRNA-1 |
| tig0024143 | three_prime_UTR | 50124 | 50669 | 50124 | ID=Msa1414820-mRNA-1:three_prime_utr;Parent=Msa1414820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
