Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0124130 | XP_003588697.1 | 98.030 | 406 | 8 | 0 | 1 | 406 | 1 | 406 | 0.0 | 835 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0124130 | sp|Q9LFM5|YUC4_ARATH | 71.788 | 397 | 106 | 2 | 11 | 403 | 12 | 406 | 0.0 | 599 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0124130 | G7I6C3 | 98.030 | 406 | 8 | 0 | 1 | 406 | 1 | 406 | 0.0 | 835 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006980 | Msa0124130 | 0.920440 | 1.276880e-87 | -8.615850e-47 |
| Msa0015710 | Msa0124130 | 0.858793 | 6.452883e-63 | -8.615850e-47 |
| Msa0016120 | Msa0124130 | 0.824244 | 8.966066e-54 | -8.615850e-47 |
| Msa0019600 | Msa0124130 | 0.822285 | 2.571295e-53 | -8.615850e-47 |
| Msa0050040 | Msa0124130 | 0.800176 | 1.629702e-48 | -8.615850e-47 |
| Msa0055450 | Msa0124130 | 0.862209 | 5.959525e-64 | -8.615850e-47 |
| Msa0062440 | Msa0124130 | 0.803532 | 3.333246e-49 | -8.615850e-47 |
| Msa0080990 | Msa0124130 | 0.831595 | 1.526922e-55 | -8.615850e-47 |
| Msa0104500 | Msa0124130 | 0.824773 | 6.731643e-54 | -8.615850e-47 |
| Msa0109880 | Msa0124130 | 0.843625 | 1.249120e-58 | -8.615850e-47 |
| Msa0111750 | Msa0124130 | 0.806705 | 7.226440e-50 | -8.615850e-47 |
| Msa0124130 | Msa0141120 | 0.839611 | 1.428358e-57 | -8.615850e-47 |
| Msa0124130 | Msa0149140 | 0.934968 | 1.770812e-96 | -8.615850e-47 |
| Msa0124130 | Msa0150720 | 0.807735 | 4.371907e-50 | -8.615850e-47 |
| Msa0124130 | Msa0152480 | 0.836232 | 1.055851e-56 | -8.615850e-47 |
| Msa0124130 | Msa0152500 | 0.843813 | 1.112481e-58 | -8.615850e-47 |
| Msa0124130 | Msa0156250 | 0.842623 | 2.309502e-58 | -8.615850e-47 |
| Msa0124130 | Msa0185490 | 0.826896 | 2.108978e-54 | -8.615850e-47 |
| Msa0124130 | Msa0197100 | 0.812360 | 4.409767e-51 | -8.615850e-47 |
| Msa0124130 | Msa0212080 | 0.809759 | 1.614294e-50 | -8.615850e-47 |
| Msa0124130 | Msa0212150 | 0.847945 | 8.386029e-60 | -8.615850e-47 |
| Msa0124130 | Msa0215640 | 0.820249 | 7.578897e-53 | -8.615850e-47 |
| Msa0124130 | Msa0221290 | 0.840589 | 7.939183e-58 | -8.615850e-47 |
| Msa0124130 | Msa0239030 | 0.822344 | 2.490548e-53 | -8.615850e-47 |
| Msa0124130 | Msa0252630 | 0.848721 | 5.115750e-60 | -8.615850e-47 |
| Msa0124130 | Msa0252770 | 0.854255 | 1.389985e-61 | -8.615850e-47 |
| Msa0124130 | Msa0276740 | 0.803370 | 3.601057e-49 | -8.615850e-47 |
| Msa0124130 | Msa0289920 | 0.844601 | 6.834214e-59 | -8.615850e-47 |
| Msa0124130 | Msa0291330 | 0.826216 | 3.064607e-54 | -8.615850e-47 |
| Msa0124130 | Msa0301580 | 0.802663 | 5.042190e-49 | -8.615850e-47 |
| Msa0124130 | Msa0306120 | 0.878845 | 2.018897e-69 | -8.615850e-47 |
| Msa0124130 | Msa0316680 | 0.818509 | 1.888721e-52 | -8.615850e-47 |
| Msa0124130 | Msa0322840 | 0.807666 | 4.521364e-50 | -8.615850e-47 |
| Msa0124130 | Msa0322860 | 0.807343 | 5.294542e-50 | -8.615850e-47 |
| Msa0124130 | Msa0329620 | 0.864839 | 9.110316e-65 | -8.615850e-47 |
| Msa0124130 | Msa0333700 | 0.817917 | 2.571549e-52 | -8.615850e-47 |
| Msa0124130 | Msa0340480 | 0.802684 | 4.991811e-49 | -8.615850e-47 |
| Msa0124130 | Msa0343660 | 0.862697 | 4.216781e-64 | -8.615850e-47 |
| Msa0124130 | Msa0344570 | 0.824207 | 9.148695e-54 | -8.615850e-47 |
| Msa0124130 | Msa0351770 | 0.847081 | 1.449252e-59 | -8.615850e-47 |
| Msa0124130 | Msa0359250 | 0.895978 | 5.729680e-76 | -8.615850e-47 |
| Msa0124130 | Msa0373960 | 0.833297 | 5.781502e-56 | -8.615850e-47 |
| Msa0124130 | Msa0375700 | 0.812251 | 4.656468e-51 | -8.615850e-47 |
| Msa0124130 | Msa0384910 | 0.804683 | 1.920732e-49 | -8.615850e-47 |
| Msa0124130 | Msa0385390 | 0.801683 | 8.020856e-49 | -8.615850e-47 |
| Msa0124130 | Msa0392420 | 0.832079 | 1.159964e-55 | -8.615850e-47 |
| Msa0124130 | Msa0392460 | 0.827032 | 1.957182e-54 | -8.615850e-47 |
| Msa0124130 | Msa0392490 | 0.825674 | 4.120846e-54 | -8.615850e-47 |
| Msa0124130 | Msa0406000 | 0.894871 | 1.639327e-75 | -8.615850e-47 |
| Msa0124130 | Msa0415320 | 0.840595 | 7.909041e-58 | -8.615850e-47 |
| Msa0124130 | Msa0423100 | 0.829072 | 6.314091e-55 | -8.615850e-47 |
| Msa0124130 | Msa0424330 | 0.851182 | 1.048299e-60 | -8.615850e-47 |
| Msa0124130 | Msa0424340 | 0.877841 | 4.544521e-69 | -8.615850e-47 |
| Msa0124130 | Msa0424350 | 0.862150 | 6.214145e-64 | -8.615850e-47 |
| Msa0124130 | Msa0441590 | 0.814546 | 1.458229e-51 | -8.615850e-47 |
| Msa0124130 | Msa0451400 | 0.891296 | 4.520187e-74 | -8.615850e-47 |
| Msa0124130 | Msa0456090 | 0.819827 | 9.465666e-53 | -8.615850e-47 |
| Msa0124130 | Msa0469260 | 0.811204 | 7.868060e-51 | -8.615850e-47 |
| Msa0124130 | Msa0479540 | 0.812036 | 5.187240e-51 | -8.615850e-47 |
| Msa0124130 | Msa0487570 | 0.829381 | 5.315726e-55 | -8.615850e-47 |
| Msa0124130 | Msa0487630 | 0.834367 | 3.123507e-56 | -8.615850e-47 |
| Msa0124130 | Msa0492190 | 0.877752 | 4.882029e-69 | -8.615850e-47 |
| Msa0124130 | Msa0515950 | 0.847262 | 1.292170e-59 | -8.615850e-47 |
| Msa0124130 | Msa0523000 | 0.814057 | 1.869982e-51 | -8.615850e-47 |
| Msa0124130 | Msa0534930 | 0.835681 | 1.456316e-56 | -8.615850e-47 |
| Msa0124130 | Msa0535040 | 0.824439 | 8.069245e-54 | -8.615850e-47 |
| Msa0124130 | Msa0575740 | 0.839892 | 1.207229e-57 | -8.615850e-47 |
| Msa0124130 | Msa0591790 | 0.860307 | 2.262769e-63 | -8.615850e-47 |
| Msa0124130 | Msa0591800 | 0.833100 | 6.474885e-56 | -8.615850e-47 |
| Msa0124130 | Msa0594090 | 0.837747 | 4.329742e-57 | -8.615850e-47 |
| Msa0124130 | Msa0641360 | 0.825144 | 5.500062e-54 | -8.615850e-47 |
| Msa0124130 | Msa0669840 | 0.866648 | 2.445280e-65 | -8.615850e-47 |
| Msa0124130 | Msa0709450 | 0.828682 | 7.848495e-55 | -8.615850e-47 |
| Msa0124130 | Msa0711320 | 0.825958 | 3.527828e-54 | -8.615850e-47 |
| Msa0124130 | Msa0725860 | 0.885529 | 7.520172e-72 | -8.615850e-47 |
| Msa0124130 | Msa0727930 | 0.802317 | 5.942435e-49 | -8.615850e-47 |
| Msa0124130 | Msa0739470 | 0.806557 | 7.763548e-50 | -8.615850e-47 |
| Msa0124130 | Msa0739480 | 0.802370 | 5.793305e-49 | -8.615850e-47 |
| Msa0124130 | Msa0739580 | 0.901126 | 3.672620e-78 | -8.615850e-47 |
| Msa0124130 | Msa0742180 | 0.809378 | 1.949501e-50 | -8.615850e-47 |
| Msa0124130 | Msa0748000 | 0.830063 | 3.625935e-55 | -8.615850e-47 |
| Msa0124130 | Msa0748400 | 0.816366 | 5.739444e-52 | -8.615850e-47 |
| Msa0124130 | Msa0751890 | 0.836998 | 6.736940e-57 | -8.615850e-47 |
| Msa0124130 | Msa0752840 | 0.838579 | 2.645143e-57 | -8.615850e-47 |
| Msa0124130 | Msa0770290 | 0.809331 | 1.994914e-50 | -8.615850e-47 |
| Msa0124130 | Msa0782230 | 0.817896 | 2.599595e-52 | -8.615850e-47 |
| Msa0124130 | Msa0782360 | 0.872004 | 4.436408e-67 | -8.615850e-47 |
| Msa0124130 | Msa0786040 | 0.818992 | 1.467065e-52 | -8.615850e-47 |
| Msa0124130 | Msa0816150 | 0.800672 | 1.291463e-48 | -8.615850e-47 |
| Msa0124130 | Msa0819890 | 0.848899 | 4.568175e-60 | -8.615850e-47 |
| Msa0124130 | Msa0819900 | 0.815394 | 9.457322e-52 | -8.615850e-47 |
| Msa0124130 | Msa0823400 | 0.833657 | 4.702123e-56 | -8.615850e-47 |
| Msa0124130 | Msa0828830 | 0.857923 | 1.171951e-62 | -8.615850e-47 |
| Msa0124130 | Msa0831940 | 0.850541 | 1.588814e-60 | -8.615850e-47 |
| Msa0124130 | Msa0840500 | 0.803949 | 2.730328e-49 | -8.615850e-47 |
| Msa0124130 | Msa0845940 | 0.833779 | 4.383695e-56 | -8.615850e-47 |
| Msa0124130 | Msa0849280 | 0.810171 | 1.315966e-50 | -8.615850e-47 |
| Msa0124130 | Msa0851020 | 0.815739 | 7.924177e-52 | -8.615850e-47 |
| Msa0124130 | Msa0860160 | 0.839757 | 1.309153e-57 | -8.615850e-47 |
| Msa0124130 | Msa0860170 | 0.850923 | 1.240066e-60 | -8.615850e-47 |
| Msa0124130 | Msa0860280 | 0.873287 | 1.652572e-67 | -8.615850e-47 |
| Msa0124130 | Msa0867350 | 0.852392 | 4.756672e-61 | -8.615850e-47 |
| Msa0124130 | Msa0885060 | 0.800735 | 1.253787e-48 | -8.615850e-47 |
| Msa0124130 | Msa0896350 | 0.847903 | 8.610704e-60 | -8.615850e-47 |
| Msa0124130 | Msa0898730 | 0.867598 | 1.216508e-65 | -8.615850e-47 |
| Msa0124130 | Msa0899950 | 0.817230 | 3.673153e-52 | -8.615850e-47 |
| Msa0124130 | Msa0916640 | 0.820832 | 5.567870e-53 | -8.615850e-47 |
| Msa0124130 | Msa0922750 | 0.847889 | 8.692334e-60 | -8.615850e-47 |
| Msa0124130 | Msa0927120 | 0.825440 | 4.681560e-54 | -8.615850e-47 |
| Msa0124130 | Msa0929870 | 0.833434 | 5.346527e-56 | -8.615850e-47 |
| Msa0124130 | Msa0936410 | 0.823943 | 1.055208e-53 | -8.615850e-47 |
| Msa0124130 | Msa0941820 | 0.849188 | 3.794690e-60 | -8.615850e-47 |
| Msa0124130 | Msa0944760 | 0.827194 | 1.789884e-54 | -8.615850e-47 |
| Msa0124130 | Msa0944880 | 0.803786 | 2.952053e-49 | -8.615850e-47 |
| Msa0124130 | Msa0953540 | 0.809597 | 1.749132e-50 | -8.615850e-47 |
| Msa0124130 | Msa0961560 | 0.838815 | 2.298520e-57 | -8.615850e-47 |
| Msa0124130 | Msa0964840 | 0.827225 | 1.759610e-54 | -8.615850e-47 |
| Msa0124130 | Msa0965310 | 0.838790 | 2.332527e-57 | -8.615850e-47 |
| Msa0124130 | Msa0973250 | 0.819118 | 1.373580e-52 | -8.615850e-47 |
| Msa0124130 | Msa0996270 | 0.865364 | 6.230880e-65 | -8.615850e-47 |
| Msa0124130 | Msa0999300 | 0.880586 | 4.858526e-70 | -8.615850e-47 |
| Msa0124130 | Msa0999320 | 0.860496 | 1.984099e-63 | -8.615850e-47 |
| Msa0124130 | Msa0999340 | 0.818608 | 1.793484e-52 | -8.615850e-47 |
| Msa0124130 | Msa0999350 | 0.842232 | 2.932783e-58 | -8.615850e-47 |
| Msa0124130 | Msa0999360 | 0.810377 | 1.188111e-50 | -8.615850e-47 |
| Msa0124130 | Msa0999390 | 0.813232 | 2.839996e-51 | -8.615850e-47 |
| Msa0124130 | Msa0999400 | 0.830817 | 2.371839e-55 | -8.615850e-47 |
| Msa0124130 | Msa0999410 | 0.816376 | 5.710131e-52 | -8.615850e-47 |
| Msa0124130 | Msa0999700 | 0.832429 | 9.499833e-56 | -8.615850e-47 |
| Msa0124130 | Msa1001870 | 0.861720 | 8.411569e-64 | -8.615850e-47 |
| Msa0124130 | Msa1001890 | 0.866430 | 2.867485e-65 | -8.615850e-47 |
| Msa0124130 | Msa1037770 | 0.820952 | 5.226742e-53 | -8.615850e-47 |
| Msa0124130 | Msa1037890 | 0.816576 | 5.151358e-52 | -8.615850e-47 |
| Msa0124130 | Msa1037900 | 0.820969 | 5.179132e-53 | -8.615850e-47 |
| Msa0124130 | Msa1037910 | 0.813706 | 2.234550e-51 | -8.615850e-47 |
| Msa0124130 | Msa1042670 | 0.800443 | 1.437584e-48 | -8.615850e-47 |
| Msa0124130 | Msa1081570 | 0.807690 | 4.468768e-50 | -8.615850e-47 |
| Msa0124130 | Msa1084520 | 0.853901 | 1.758331e-61 | -8.615850e-47 |
| Msa0124130 | Msa1100140 | 0.841630 | 4.228367e-58 | -8.615850e-47 |
| Msa0124130 | Msa1106060 | 0.824395 | 8.261228e-54 | -8.615850e-47 |
| Msa0124130 | Msa1125810 | 0.872294 | 3.551049e-67 | -8.615850e-47 |
| Msa0124130 | Msa1127140 | 0.802102 | 6.577878e-49 | -8.615850e-47 |
| Msa0124130 | Msa1129960 | 0.802399 | 5.715418e-49 | -8.615850e-47 |
| Msa0124130 | Msa1129970 | 0.812255 | 4.646977e-51 | -8.615850e-47 |
| Msa0124130 | Msa1135380 | 0.811359 | 7.281394e-51 | -8.615850e-47 |
| Msa0124130 | Msa1145020 | 0.828032 | 1.126424e-54 | -8.615850e-47 |
| Msa0124130 | Msa1171310 | 0.863544 | 2.308088e-64 | -8.615850e-47 |
| Msa0124130 | Msa1176580 | 0.838083 | 3.549401e-57 | -8.615850e-47 |
| Msa0124130 | Msa1201110 | 0.833142 | 6.321705e-56 | -8.615850e-47 |
| Msa0124130 | Msa1201160 | 0.858418 | 8.351067e-63 | -8.615850e-47 |
| Msa0124130 | Msa1228190 | 0.871398 | 7.043739e-67 | -8.615850e-47 |
| Msa0124130 | Msa1271260 | 0.865097 | 7.560628e-65 | -8.615850e-47 |
| Msa0124130 | Msa1294290 | 0.852970 | 3.253682e-61 | -8.615850e-47 |
| Msa0124130 | Msa1305510 | 0.858533 | 7.716182e-63 | -8.615850e-47 |
| Msa0124130 | Msa1316540 | 0.850367 | 1.778045e-60 | -8.615850e-47 |
| Msa0124130 | Msa1326630 | 0.836319 | 1.003492e-56 | -8.615850e-47 |
| Msa0124130 | Msa1336620 | 0.807117 | 5.910412e-50 | -8.615850e-47 |
| Msa0124130 | Msa1339580 | 0.803533 | 3.331317e-49 | -8.615850e-47 |
| Msa0124130 | Msa1356990 | 0.816027 | 6.833021e-52 | -8.615850e-47 |
| Msa0124130 | Msa1369040 | 0.819477 | 1.138006e-52 | -8.615850e-47 |
| Msa0124130 | Msa1374550 | 0.826394 | 2.778408e-54 | -8.615850e-47 |
| Msa0124130 | Msa1378870 | 0.852090 | 5.799663e-61 | -8.615850e-47 |
| Msa0124130 | Msa1379970 | 0.825230 | 5.250393e-54 | -8.615850e-47 |
| Msa0124130 | Msa1388770 | 0.836216 | 1.065826e-56 | -8.615850e-47 |
| Msa0124130 | Msa1389050 | 0.813255 | 2.808211e-51 | -8.615850e-47 |
| Msa0124130 | Msa1394890 | 0.828643 | 8.021875e-55 | -8.615850e-47 |
| Msa0124130 | Msa1406780 | 0.889714 | 1.891014e-73 | -8.615850e-47 |
| Msa0124130 | Msa1420060 | 0.810053 | 1.395710e-50 | -8.615850e-47 |
| Msa0124130 | Msa1421550 | 0.862031 | 6.755167e-64 | -8.615850e-47 |
| Msa0124130 | Msa1423460 | 0.829472 | 5.049880e-55 | -8.615850e-47 |
| Msa0124130 | Msa1431280 | 0.803464 | 3.443326e-49 | -8.615850e-47 |
| Msa0124130 | Msa1431850 | 0.898349 | 5.789620e-77 | -8.615850e-47 |
| Msa0124130 | Msa1435480 | 0.831511 | 1.601849e-55 | -8.615850e-47 |
| Msa0124130 | Msa1455320 | 0.808722 | 2.693428e-50 | -8.615850e-47 |
| Msa0124130 | Msa1456730 | 0.847648 | 1.012293e-59 | -8.615850e-47 |
| Msa0124130 | Msa1458910 | 0.809987 | 1.442006e-50 | -8.615850e-47 |
| Msa0124130 | Msa1459530 | 0.811993 | 5.302992e-51 | -8.615850e-47 |
| Msa0124130 | Msa1461060 | 0.828507 | 8.649666e-55 | -8.615850e-47 |
| Msa0124130 | Msa1462530 | 0.801735 | 7.825344e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0124130 | MtrunA17_Chr1g0148801 | 98.030 | 406 | 8 | 0 | 1 | 406 | 1 | 406 | 0.0 | 835 |
| Msa0124130 | MtrunA17_Chr6g0485621 | 60.668 | 389 | 145 | 2 | 13 | 393 | 29 | 417 | 0.0 | 514 |
| Msa0124130 | MtrunA17_Chr7g0262591 | 58.005 | 381 | 157 | 2 | 9 | 388 | 17 | 395 | 1.37e-177 | 501 |
| Msa0124130 | MtrunA17_Chr1g0147221 | 62.078 | 385 | 142 | 2 | 9 | 389 | 35 | 419 | 2.01e-177 | 501 |
| Msa0124130 | MtrunA17_Chr1g0182991 | 57.360 | 394 | 164 | 3 | 9 | 398 | 18 | 411 | 2.33e-175 | 496 |
| Msa0124130 | MtrunA17_Chr1g0169111 | 57.216 | 388 | 160 | 1 | 7 | 388 | 93 | 480 | 3.79e-173 | 493 |
| Msa0124130 | MtrunA17_Chr3g0139441 | 59.788 | 378 | 147 | 3 | 11 | 383 | 34 | 411 | 5.14e-171 | 484 |
| Msa0124130 | MtrunA17_Chr7g0262471 | 54.575 | 306 | 136 | 2 | 84 | 388 | 213 | 516 | 6.12e-125 | 371 |
| Msa0124130 | MtrunA17_Chr7g0268621 | 44.652 | 374 | 196 | 5 | 17 | 384 | 7 | 375 | 8.88e-115 | 340 |
| Msa0124130 | MtrunA17_Chr8g0350371 | 45.213 | 376 | 195 | 4 | 17 | 386 | 7 | 377 | 9.38e-115 | 340 |
| Msa0124130 | MtrunA17_Chr7g0268611 | 42.632 | 380 | 207 | 4 | 17 | 390 | 9 | 383 | 5.28e-113 | 335 |
| Msa0124130 | MtrunA17_Chr5g0412881 | 44.032 | 377 | 200 | 5 | 17 | 387 | 7 | 378 | 2.66e-112 | 334 |
| Msa0124130 | MtrunA17_Chr3g0125701 | 42.932 | 382 | 207 | 4 | 17 | 392 | 8 | 384 | 1.20e-111 | 332 |
| Msa0124130 | MtrunA17_Chr3g0125691 | 42.932 | 382 | 207 | 4 | 17 | 392 | 8 | 384 | 1.83e-111 | 332 |
| Msa0124130 | MtrunA17_Chr3g0125711 | 41.519 | 395 | 219 | 5 | 17 | 404 | 8 | 397 | 2.75e-109 | 327 |
| Msa0124130 | MtrunA17_Chr4g0025641 | 41.509 | 212 | 119 | 2 | 5 | 211 | 4 | 215 | 2.26e-53 | 177 |
| Msa0124130 | MtrunA17_Chr4g0025651 | 42.857 | 161 | 89 | 3 | 226 | 384 | 11 | 170 | 1.20e-39 | 140 |
| Msa0124130 | MtrunA17_Chr3g0129991 | 39.496 | 119 | 68 | 2 | 74 | 188 | 1 | 119 | 2.63e-25 | 99.8 |
| Msa0124130 | MtrunA17_Chr8g0352461 | 24.545 | 220 | 135 | 7 | 18 | 208 | 6 | 223 | 5.05e-17 | 82.4 |
| Msa0124130 | MtrunA17_Chr2g0304651 | 25.098 | 255 | 142 | 12 | 18 | 230 | 7 | 254 | 1.94e-14 | 75.1 |
| Msa0124130 | MtrunA17_Chr8g0352481 | 23.301 | 206 | 132 | 4 | 18 | 197 | 6 | 211 | 6.18e-14 | 73.2 |
| Msa0124130 | MtrunA17_Chr2g0304721 | 26.772 | 254 | 137 | 11 | 18 | 229 | 7 | 253 | 7.69e-14 | 73.2 |
| Msa0124130 | MtrunA17_Chr4g0070101 | 23.864 | 352 | 195 | 15 | 40 | 325 | 38 | 382 | 2.94e-12 | 68.2 |
| Msa0124130 | MtrunA17_Chr4g0070121 | 29.193 | 161 | 83 | 7 | 40 | 169 | 38 | 198 | 4.13e-11 | 62.8 |
| Msa0124130 | MtrunA17_Chr2g0286701 | 25.792 | 221 | 122 | 9 | 18 | 200 | 16 | 232 | 6.20e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0124130 | AT5G11320.1 | 71.788 | 397 | 106 | 2 | 11 | 403 | 12 | 406 | 0.0 | 599 |
| Msa0124130 | AT4G32540.1 | 63.000 | 400 | 143 | 3 | 11 | 406 | 16 | 414 | 0.0 | 551 |
| Msa0124130 | AT4G32540.2 | 62.935 | 402 | 142 | 4 | 11 | 406 | 16 | 416 | 0.0 | 546 |
| Msa0124130 | AT5G11320.2 | 72.531 | 324 | 87 | 1 | 11 | 334 | 12 | 333 | 7.55e-178 | 499 |
| Msa0124130 | AT4G13260.1 | 60.256 | 390 | 150 | 2 | 2 | 386 | 14 | 403 | 4.33e-177 | 500 |
| Msa0124130 | AT1G04610.1 | 57.364 | 387 | 158 | 1 | 9 | 388 | 30 | 416 | 1.43e-174 | 494 |
| Msa0124130 | AT1G04180.1 | 57.990 | 388 | 159 | 3 | 4 | 388 | 14 | 400 | 2.36e-173 | 491 |
| Msa0124130 | AT5G43890.1 | 55.527 | 389 | 167 | 2 | 6 | 388 | 15 | 403 | 8.38e-171 | 484 |
| Msa0124130 | AT4G28720.1 | 56.072 | 387 | 163 | 2 | 9 | 388 | 18 | 404 | 1.47e-169 | 481 |
| Msa0124130 | AT5G25620.2 | 58.312 | 391 | 157 | 4 | 10 | 395 | 27 | 416 | 8.31e-169 | 480 |
| Msa0124130 | AT5G25620.1 | 59.115 | 384 | 151 | 4 | 10 | 388 | 27 | 409 | 2.12e-168 | 478 |
| Msa0124130 | AT2G33230.1 | 57.106 | 387 | 158 | 2 | 9 | 388 | 25 | 410 | 5.78e-167 | 475 |
| Msa0124130 | AT4G13260.2 | 60.269 | 297 | 114 | 1 | 2 | 294 | 14 | 310 | 1.25e-136 | 393 |
| Msa0124130 | AT4G13260.3 | 57.931 | 290 | 117 | 2 | 102 | 386 | 11 | 300 | 7.44e-117 | 343 |
| Msa0124130 | AT1G21430.1 | 44.892 | 372 | 195 | 4 | 17 | 383 | 10 | 376 | 3.47e-116 | 344 |
| Msa0124130 | AT1G48910.1 | 42.820 | 383 | 206 | 5 | 17 | 392 | 6 | 382 | 8.29e-115 | 340 |
| Msa0124130 | AT1G19250.1 | 24.181 | 397 | 209 | 16 | 18 | 334 | 15 | 399 | 1.04e-15 | 79.3 |
| Msa0124130 | AT1G65860.1 | 24.336 | 226 | 135 | 8 | 18 | 210 | 15 | 237 | 1.52e-12 | 69.3 |
| Msa0124130 | AT5G07800.1 | 21.739 | 230 | 142 | 6 | 18 | 209 | 18 | 247 | 2.45e-12 | 68.6 |
| Msa0124130 | AT1G62560.1 | 23.009 | 226 | 135 | 7 | 18 | 208 | 15 | 236 | 8.29e-12 | 67.0 |
| Msa0124130 | AT1G62560.2 | 23.009 | 226 | 135 | 7 | 18 | 208 | 15 | 236 | 1.10e-11 | 66.6 |
Find 64 sgRNAs with CRISPR-Local
Find 142 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATTCAAGTTCTCAAATT+TGG | 0.134264 | 1_3:+51683541 | Msa0124130:CDS |
| GTCATTGGTTGTGGGAATTC+TGG | 0.224967 | 1_3:+51683741 | Msa0124130:CDS |
| TTCTGGAATGGAAGTTAGTT+TGG | 0.279463 | 1_3:+51683758 | Msa0124130:CDS |
| GTTAGTTTCAAGCTTCTTCT+TGG | 0.280395 | 1_3:+51684810 | Msa0124130:CDS |
| TAGCTATGGGATTATATAAA+TGG | 0.285172 | 1_3:+51684755 | Msa0124130:CDS |
| AATTAAATCCGGTAACATTA+AGG | 0.303146 | 1_3:+51684936 | Msa0124130:CDS |
| GTTGCAAGTTTGAGTTCTAT+TGG | 0.313027 | 1_3:-51684874 | None:intergenic |
| ATGTTTGGTTTCTCAACATA+TGG | 0.323559 | 1_3:+51684730 | Msa0124130:CDS |
| CATACAAGTGATTATAAATC+TGG | 0.355020 | 1_3:+51683690 | Msa0124130:CDS |
| GATGCAATAATCTTAGCAAC+AGG | 0.380414 | 1_3:+51685131 | Msa0124130:CDS |
| TAATCACTTGTATGAGCAAC+AGG | 0.388008 | 1_3:-51683681 | None:intergenic |
| GCAAAGTGTGTATGGATTCA+TGG | 0.396734 | 1_3:+51683219 | Msa0124130:CDS |
| GTAACATACCTTAATGTTAC+CGG | 0.400738 | 1_3:-51684944 | None:intergenic |
| ATAGTAGGTGCTGGTCCTTC+AGG | 0.401110 | 1_3:+51683249 | Msa0124130:CDS |
| ACACAATGCTATGCCTCATT+TGG | 0.405714 | 1_3:+51683791 | Msa0124130:CDS |
| CCTTGGCTTATTGTTGCTAC+TGG | 0.412409 | 1_3:+51683603 | Msa0124130:CDS |
| TTAGTTTCAAGCTTCTTCTT+GGG | 0.427173 | 1_3:+51684811 | Msa0124130:CDS |
| TGTTCCATACCATGAATTGT+TGG | 0.436540 | 1_3:-51683648 | None:intergenic |
| ATTCTTCCAAGAGATATGTT+TGG | 0.437726 | 1_3:+51684715 | Msa0124130:CDS |
| GGTATCAAGAGGCCTAAAAC+TGG | 0.451158 | 1_3:+51684850 | Msa0124130:CDS |
| ACAAGAGCAATGTGCCTACT+TGG | 0.453063 | 1_3:+51685156 | Msa0124130:CDS |
| GGACCAGCACCTACTATGAT+AGG | 0.457137 | 1_3:-51683243 | None:intergenic |
| GTTTGAGGAAAACTCATCAT+AGG | 0.461046 | 1_3:-51683411 | None:intergenic |
| GAGAAACCAAACATATCTCT+TGG | 0.462714 | 1_3:-51684721 | None:intergenic |
| TTGGGAAACACCAATCACTA+TGG | 0.465852 | 1_3:+51684829 | Msa0124130:CDS |
| ATAGAACTCAAACTTGCAAC+AGG | 0.466421 | 1_3:+51684877 | Msa0124130:CDS |
| CAAATAGCACAAATTAAATC+CGG | 0.476052 | 1_3:+51684925 | Msa0124130:CDS |
| CTGAAGATATTACTAATCAA+TGG | 0.476187 | 1_3:+51685832 | Msa0124130:CDS |
| GTGAAAGAGATAACAAGAAA+TGG | 0.481980 | 1_3:+51685074 | Msa0124130:CDS |
| GTGATTGCATAGCTTCACTA+TGG | 0.487978 | 1_3:+51683331 | Msa0124130:CDS |
| ATCACTTTGATATTCATCCT+AGG | 0.490915 | 1_3:+51683490 | Msa0124130:CDS |
| CCTCTTGATACCATAGTGAT+TGG | 0.496998 | 1_3:-51684839 | None:intergenic |
| CCCTTTCCTCATGGTTGGAA+AGG | 0.498580 | 1_3:+51685735 | Msa0124130:CDS |
| CTCAACATATGGAATAGCTA+TGG | 0.500774 | 1_3:+51684741 | Msa0124130:CDS |
| AAACACCCTTTCCTCATGGT+TGG | 0.503476 | 1_3:+51685730 | Msa0124130:CDS |
| CCTTTCCAACCATGAGGAAA+GGG | 0.506085 | 1_3:-51685735 | None:intergenic |
| ACATCAGTTCATTTCCTACA+TGG | 0.512049 | 1_3:+51683455 | Msa0124130:CDS |
| ATTCATGGACCTATCATAGT+AGG | 0.515217 | 1_3:+51683234 | Msa0124130:CDS |
| TCAACATATGGAATAGCTAT+GGG | 0.521973 | 1_3:+51684742 | Msa0124130:CDS |
| GAGTTTCGTGCAACCAAATG+AGG | 0.533241 | 1_3:-51683804 | None:intergenic |
| TTCAAGTTCTCAAATTTGGA+TGG | 0.536810 | 1_3:+51683545 | Msa0124130:CDS |
| GGACCTATCATAGTAGGTGC+TGG | 0.547397 | 1_3:+51683240 | Msa0124130:CDS |
| AAAACTCCTGTACTTGATGT+TGG | 0.551364 | 1_3:+51684901 | Msa0124130:CDS |
| GGATACTTAGGAAATGTTTG+AGG | 0.552505 | 1_3:-51683426 | None:intergenic |
| ACCTTTCCAACCATGAGGAA+AGG | 0.554382 | 1_3:-51685736 | None:intergenic |
| GAGCAAGGATTGTATACAGT+GGG | 0.564264 | 1_3:+51685759 | Msa0124130:CDS |
| CTTCTCTCAAGAATGAGACT+TGG | 0.577619 | 1_3:-51683309 | None:intergenic |
| TTCACAAGAAGAGGTCTACA+TGG | 0.580526 | 1_3:+51685783 | Msa0124130:CDS |
| AATATCAAAGTGATCAGCAT+AGG | 0.584130 | 1_3:-51683481 | None:intergenic |
| ATTTGACCAACATCAAGTAC+AGG | 0.585749 | 1_3:-51684907 | None:intergenic |
| CAATGTGCCTACTTGGCTCA+AGG | 0.592907 | 1_3:+51685163 | Msa0124130:CDS |
| AGAACAGTTTGATTAAACCT+AGG | 0.595686 | 1_3:-51683507 | None:intergenic |
| ACAGTGGGTTTCACAAGAAG+AGG | 0.597945 | 1_3:+51685774 | Msa0124130:CDS |
| CATGGTTGGAAAGGTGAGCA+AGG | 0.614511 | 1_3:+51685744 | Msa0124130:CDS |
| TGGTTGTGGGAATTCTGGAA+TGG | 0.619937 | 1_3:+51683746 | Msa0124130:CDS |
| GCTGCTTGTTTATCAGAACA+AGG | 0.634289 | 1_3:+51683282 | Msa0124130:CDS |
| TGCTCACCTTTCCAACCATG+AGG | 0.637968 | 1_3:-51685741 | None:intergenic |
| TTAATATTGTAGGTGATGGA+AGG | 0.640132 | 1_3:+51685050 | Msa0124130:intron |
| CCAATCACTATGGTATCAAG+AGG | 0.641108 | 1_3:+51684839 | Msa0124130:CDS |
| CCAGTAGCAACAATAAGCCA+AGG | 0.647996 | 1_3:-51683603 | None:intergenic |
| GCAGCTACTGCTATACCTGA+AGG | 0.661207 | 1_3:-51683264 | None:intergenic |
| ATGCAATAATCTTAGCAACA+GGG | 0.685349 | 1_3:+51685132 | Msa0124130:CDS |
| ATCAGCATAGGATTCCATGT+AGG | 0.688016 | 1_3:-51683469 | None:intergenic |
| TGAGCAAGGATTGTATACAG+TGG | 0.697920 | 1_3:+51685758 | Msa0124130:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATATTAATAAATTTATT+AGG | + | chr1_3:51684972-51684991 | Msa0124130:intron | 0.0% |
| !!! | TTTGATTTGTAAATTTTTTT+AGG | + | chr1_3:51685007-51685026 | Msa0124130:intron | 10.0% |
| !!! | TATTTTTTTTTTATTGATTC+AGG | + | chr1_3:51685674-51685693 | Msa0124130:intron | 10.0% |
| !!! | ATTTTTTTTTTATTGATTCA+GGG | + | chr1_3:51685675-51685694 | Msa0124130:intron | 10.0% |
| !! | AAAGAAATATTAAATGATGA+AGG | - | chr1_3:51684312-51684331 | None:intergenic | 15.0% |
| !! | ATTATTAAAATTACCCAAAT+GGG | - | chr1_3:51684630-51684649 | None:intergenic | 15.0% |
| !!! | GCAATATTTTATATGATTTA+AGG | + | chr1_3:51684687-51684706 | Msa0124130:intron | 15.0% |
| !!! | AAGAATAGTACTTTTTAAAA+GGG | - | chr1_3:51685550-51685569 | None:intergenic | 15.0% |
| !!! | AAAGAATAGTACTTTTTAAA+AGG | - | chr1_3:51685551-51685570 | None:intergenic | 15.0% |
| !!! | TAGGTAAATGAAGTTTTAAA+CGG | - | chr1_3:51683374-51683393 | None:intergenic | 20.0% |
| !! | TTCTGAGTACAAAAATAAAA+AGG | + | chr1_3:51683713-51683732 | Msa0124130:CDS | 20.0% |
| !!! | GTACAAAAATAAAAAGGTTT+TGG | + | chr1_3:51683719-51683738 | Msa0124130:CDS | 20.0% |
| !! | TTGAAATTCGAAAGAAAAAA+GGG | - | chr1_3:51683838-51683857 | None:intergenic | 20.0% |
| !! | ATTGAAATTCGAAAGAAAAA+AGG | - | chr1_3:51683839-51683858 | None:intergenic | 20.0% |
| !! | TAAATAATCAAGGGTAATAA+AGG | + | chr1_3:51684352-51684371 | Msa0124130:intron | 20.0% |
| !! | AAATGACAATTAAAAAGGAA+CGG | + | chr1_3:51684443-51684462 | Msa0124130:intron | 20.0% |
| !! | ATTGTTTAGTACTTAAAATG+AGG | + | chr1_3:51684584-51684603 | Msa0124130:intron | 20.0% |
| !!! | ATATGTTATTTTTTCCCATT+TGG | + | chr1_3:51684613-51684632 | Msa0124130:intron | 20.0% |
| !!! | TATGTTATTTTTTCCCATTT+GGG | + | chr1_3:51684614-51684633 | Msa0124130:intron | 20.0% |
| !! | GATTATTAAAATTACCCAAA+TGG | - | chr1_3:51684631-51684650 | None:intergenic | 20.0% |
| !!! | TTTGTAAATTTTTTTAGGCT+AGG | + | chr1_3:51685012-51685031 | Msa0124130:intron | 20.0% |
| !! | AAAGAATAAAATCAGTTTCT+TGG | + | chr1_3:51685324-51685343 | Msa0124130:intron | 20.0% |
| !!! | ATAAAACAGTACTAAACTTT+TGG | + | chr1_3:51685576-51685595 | Msa0124130:intron | 20.0% |
| !!! | AATGATTTTTTCACTAAAGA+TGG | + | chr1_3:51685699-51685718 | Msa0124130:CDS | 20.0% |
| !! | TTGATTCAAGTTCTCAAATT+TGG | + | chr1_3:51683541-51683560 | Msa0124130:CDS | 25.0% |
| !! | ATTTTCAGTATTTTTCACCT+TGG | + | chr1_3:51683586-51683605 | Msa0124130:CDS | 25.0% |
| ! | CATACAAGTGATTATAAATC+TGG | + | chr1_3:51683690-51683709 | Msa0124130:CDS | 25.0% |
| !!! | AATAAAAAGGTTTTGGTCAT+TGG | + | chr1_3:51683726-51683745 | Msa0124130:CDS | 25.0% |
| ! | NNNNNNNNNGCGGTTTAATG+TGG | + | chr1_3:51683983-51684002 | Msa0124130:intron | 25.0% |
| ! | TTAATACATGTTTCGATTCA+TGG | + | chr1_3:51684068-51684087 | Msa0124130:intron | 25.0% |
| ! | AAATCACGACAAAAAAATGA+TGG | - | chr1_3:51684138-51684157 | None:intergenic | 25.0% |
| ! | TCTCTGCAATAAATAATCAA+GGG | + | chr1_3:51684343-51684362 | Msa0124130:intron | 25.0% |
| ! | CTGCAAAATGACAATTAAAA+AGG | + | chr1_3:51684438-51684457 | Msa0124130:intron | 25.0% |
| ! | TTTAATAAGGTCACTCATAA+AGG | + | chr1_3:51684520-51684539 | Msa0124130:intron | 25.0% |
| ! | TAGCTATGGGATTATATAAA+TGG | + | chr1_3:51684755-51684774 | Msa0124130:CDS | 25.0% |
| !!! | AACTTGTCTACTAGTTTTAA+TGG | - | chr1_3:51684784-51684803 | None:intergenic | 25.0% |
| ! | CAAATAGCACAAATTAAATC+CGG | + | chr1_3:51684925-51684944 | Msa0124130:CDS | 25.0% |
| ! | AATTAAATCCGGTAACATTA+AGG | + | chr1_3:51684936-51684955 | Msa0124130:CDS | 25.0% |
| !!! | TTTTTTAGGCTAGGATTAAT+TGG | + | chr1_3:51685021-51685040 | Msa0124130:intron | 25.0% |
| !!! | TTTTTAGGCTAGGATTAATT+GGG | + | chr1_3:51685022-51685041 | Msa0124130:intron | 25.0% |
| ! | TTGGGATTGATTAATATTGT+AGG | + | chr1_3:51685040-51685059 | Msa0124130:intron | 25.0% |
| ! | TTGATTAATATTGTAGGTGA+TGG | + | chr1_3:51685046-51685065 | Msa0124130:intron | 25.0% |
| !! | AAGAAATGGTGCAAAATTTT+TGG | + | chr1_3:51685088-51685107 | Msa0124130:CDS | 25.0% |
| !! | TGTTTTTCTCTTCTTTTACA+TGG | + | chr1_3:51685640-51685659 | Msa0124130:intron | 25.0% |
| !!! | AATATCTTCAGCTATTTTGA+TGG | - | chr1_3:51685823-51685842 | None:intergenic | 25.0% |
| ! | CTGAAGATATTACTAATCAA+TGG | + | chr1_3:51685832-51685851 | Msa0124130:CDS | 25.0% |
| !!! | CACTTTGCTTTTTCTTTGAA+AGG | - | chr1_3:51683207-51683226 | None:intergenic | 30.0% |
| AAGAAAAAGCAAAGTGTGTA+TGG | + | chr1_3:51683211-51683230 | Msa0124130:CDS | 30.0% | |
| !!! | ATGAAGTTTTAAACGGTCAT+AGG | - | chr1_3:51683367-51683386 | None:intergenic | 30.0% |
| GGTAGTTCACAAAAATGTTT+AGG | - | chr1_3:51683393-51683412 | None:intergenic | 30.0% | |
| ! | TGATGTTTTGTAGGATACTT+AGG | - | chr1_3:51683441-51683460 | None:intergenic | 30.0% |
| ! | GAAATGAACTGATGTTTTGT+AGG | - | chr1_3:51683450-51683469 | None:intergenic | 30.0% |
| AATATCAAAGTGATCAGCAT+AGG | - | chr1_3:51683484-51683503 | None:intergenic | 30.0% | |
| ATCACTTTGATATTCATCCT+AGG | + | chr1_3:51683490-51683509 | Msa0124130:CDS | 30.0% | |
| AGAACAGTTTGATTAAACCT+AGG | - | chr1_3:51683510-51683529 | None:intergenic | 30.0% | |
| ! | TTCAAGTTCTCAAATTTGGA+TGG | + | chr1_3:51683545-51683564 | Msa0124130:CDS | 30.0% |
| ! | TTTTCCAACAATTCATGGTA+TGG | + | chr1_3:51683644-51683663 | Msa0124130:CDS | 30.0% |
| ! | GATGGTTTTTGACAAAATTG+CGG | - | chr1_3:51684120-51684139 | None:intergenic | 30.0% |
| !! | TAGCTAGAACTTTGAAATGA+CGG | - | chr1_3:51684172-51684191 | None:intergenic | 30.0% |
| AAGTGACCATTAAAAAGGAA+CGG | - | chr1_3:51684209-51684228 | None:intergenic | 30.0% | |
| !! | TCCTTTTTAATGGTCACTTT+TGG | + | chr1_3:51684210-51684229 | Msa0124130:intron | 30.0% |
| !!! | CCTTTTTAATGGTCACTTTT+GGG | + | chr1_3:51684211-51684230 | Msa0124130:intron | 30.0% |
| CTCTCTGCAATAAATAATCA+AGG | + | chr1_3:51684342-51684361 | Msa0124130:intron | 30.0% | |
| !! | ACTTGTGAGTTTGTTCTTTT+TGG | + | chr1_3:51684653-51684672 | Msa0124130:intron | 30.0% |
| !!! | TTGTTCTTTTTGGCTAACTT+TGG | + | chr1_3:51684663-51684682 | Msa0124130:intron | 30.0% |
| ATTCTTCCAAGAGATATGTT+TGG | + | chr1_3:51684715-51684734 | Msa0124130:CDS | 30.0% | |
| ! | ATGTTTGGTTTCTCAACATA+TGG | + | chr1_3:51684730-51684749 | Msa0124130:CDS | 30.0% |
| TCAACATATGGAATAGCTAT+GGG | + | chr1_3:51684742-51684761 | Msa0124130:CDS | 30.0% | |
| TTAGTTTCAAGCTTCTTCTT+GGG | + | chr1_3:51684811-51684830 | Msa0124130:CDS | 30.0% | |
| GTAACATACCTTAATGTTAC+CGG | - | chr1_3:51684947-51684966 | None:intergenic | 30.0% | |
| !! | TTAATATTGTAGGTGATGGA+AGG | + | chr1_3:51685050-51685069 | Msa0124130:intron | 30.0% |
| GTGAAAGAGATAACAAGAAA+TGG | + | chr1_3:51685074-51685093 | Msa0124130:CDS | 30.0% | |
| !! | AATGGTGCAAAATTTTTGGA+TGG | + | chr1_3:51685092-51685111 | Msa0124130:CDS | 30.0% |
| !! | ATTTTTGGATGGACAAGAAA+AGG | + | chr1_3:51685103-51685122 | Msa0124130:CDS | 30.0% |
| ATGCAATAATCTTAGCAACA+GGG | + | chr1_3:51685132-51685151 | Msa0124130:CDS | 30.0% | |
| ATTCATGGACCTATCATAGT+AGG | + | chr1_3:51683234-51683253 | Msa0124130:CDS | 35.0% | |
| GTTTGAGGAAAACTCATCAT+AGG | - | chr1_3:51683414-51683433 | None:intergenic | 35.0% | |
| GGATACTTAGGAAATGTTTG+AGG | - | chr1_3:51683429-51683448 | None:intergenic | 35.0% | |
| ACATCAGTTCATTTCCTACA+TGG | + | chr1_3:51683455-51683474 | Msa0124130:CDS | 35.0% | |
| CCATGAATTGTTGGAAAAAC+AGG | - | chr1_3:51683642-51683661 | None:intergenic | 35.0% | |
| !! | CCTGTTTTTCCAACAATTCA+TGG | + | chr1_3:51683639-51683658 | Msa0124130:CDS | 35.0% |
| TGTTCCATACCATGAATTGT+TGG | - | chr1_3:51683651-51683670 | None:intergenic | 35.0% | |
| ! | CATGGTATGGAACATTTTCA+TGG | + | chr1_3:51683657-51683676 | Msa0124130:CDS | 35.0% |
| TAATCACTTGTATGAGCAAC+AGG | - | chr1_3:51683684-51683703 | None:intergenic | 35.0% | |
| !! | TTCTGGAATGGAAGTTAGTT+TGG | + | chr1_3:51683758-51683777 | Msa0124130:CDS | 35.0% |
| ! | CATCGATTAAAGATGCATCT+CGG | - | chr1_3:51684009-51684028 | None:intergenic | 35.0% |
| TTTGACAAAATTGCGGTCAT+AGG | - | chr1_3:51684113-51684132 | None:intergenic | 35.0% | |
| CCCAAAAGTGACCATTAAAA+AGG | - | chr1_3:51684214-51684233 | None:intergenic | 35.0% | |
| GACAATTAAAAAGGAACGGA+TGG | + | chr1_3:51684447-51684466 | Msa0124130:intron | 35.0% | |
| GAGAAACCAAACATATCTCT+TGG | - | chr1_3:51684724-51684743 | None:intergenic | 35.0% | |
| CTCAACATATGGAATAGCTA+TGG | + | chr1_3:51684741-51684760 | Msa0124130:CDS | 35.0% | |
| ! | GTTAGTTTCAAGCTTCTTCT+TGG | + | chr1_3:51684810-51684829 | Msa0124130:CDS | 35.0% |
| ! | AGTTCTATTGGACCAGTTTT+AGG | - | chr1_3:51684865-51684884 | None:intergenic | 35.0% |
| ! | GTTGCAAGTTTGAGTTCTAT+TGG | - | chr1_3:51684877-51684896 | None:intergenic | 35.0% |
| ATAGAACTCAAACTTGCAAC+AGG | + | chr1_3:51684877-51684896 | Msa0124130:CDS | 35.0% | |
| AAAACTCCTGTACTTGATGT+TGG | + | chr1_3:51684901-51684920 | Msa0124130:CDS | 35.0% | |
| ATTTGACCAACATCAAGTAC+AGG | - | chr1_3:51684910-51684929 | None:intergenic | 35.0% | |
| GATGCAATAATCTTAGCAAC+AGG | + | chr1_3:51685131-51685150 | Msa0124130:CDS | 35.0% | |
| ! | TTTTTAACCTTGAGCCAAGT+AGG | - | chr1_3:51685173-51685192 | None:intergenic | 35.0% |
| CTTATGACCTATCACTATCT+AGG | + | chr1_3:51685239-51685258 | Msa0124130:intron | 35.0% | |
| GCAAAGTGTGTATGGATTCA+TGG | + | chr1_3:51683219-51683238 | Msa0124130:CDS | 40.0% | |
| GCTGCTTGTTTATCAGAACA+AGG | + | chr1_3:51683282-51683301 | Msa0124130:CDS | 40.0% | |
| CTTCTCTCAAGAATGAGACT+TGG | - | chr1_3:51683312-51683331 | None:intergenic | 40.0% | |
| GTGATTGCATAGCTTCACTA+TGG | + | chr1_3:51683331-51683350 | Msa0124130:CDS | 40.0% | |
| ATCAGCATAGGATTCCATGT+AGG | - | chr1_3:51683472-51683491 | None:intergenic | 40.0% | |
| !! | AAGGTTTTGGTCATTGGTTG+TGG | + | chr1_3:51683732-51683751 | Msa0124130:CDS | 40.0% |
| !! | AGGTTTTGGTCATTGGTTGT+GGG | + | chr1_3:51683733-51683752 | Msa0124130:CDS | 40.0% |
| ACACAATGCTATGCCTCATT+TGG | + | chr1_3:51683791-51683810 | Msa0124130:CDS | 40.0% | |
| ! | CTTCCTCCGTTCCTTTTTAA+TGG | + | chr1_3:51684200-51684219 | Msa0124130:intron | 40.0% |
| TGACCATTAAAAAGGAACGG+AGG | - | chr1_3:51684206-51684225 | None:intergenic | 40.0% | |
| TTGGGAAACACCAATCACTA+TGG | + | chr1_3:51684829-51684848 | Msa0124130:CDS | 40.0% | |
| CCTCTTGATACCATAGTGAT+TGG | - | chr1_3:51684842-51684861 | None:intergenic | 40.0% | |
| CCAATCACTATGGTATCAAG+AGG | + | chr1_3:51684839-51684858 | Msa0124130:CDS | 40.0% | |
| ACCTATCACTATCTAGGCTT+GGG | + | chr1_3:51685245-51685264 | Msa0124130:intron | 40.0% | |
| TGAGCAAGGATTGTATACAG+TGG | + | chr1_3:51685758-51685777 | Msa0124130:CDS | 40.0% | |
| GAGCAAGGATTGTATACAGT+GGG | + | chr1_3:51685759-51685778 | Msa0124130:CDS | 40.0% | |
| TTCACAAGAAGAGGTCTACA+TGG | + | chr1_3:51685783-51685802 | Msa0124130:CDS | 40.0% | |
| CCAGTAGCAACAATAAGCCA+AGG | - | chr1_3:51683606-51683625 | None:intergenic | 45.0% | |
| CCTTGGCTTATTGTTGCTAC+TGG | + | chr1_3:51683603-51683622 | Msa0124130:CDS | 45.0% | |
| ! | GTCATTGGTTGTGGGAATTC+TGG | + | chr1_3:51683741-51683760 | Msa0124130:CDS | 45.0% |
| ! | TGGTTGTGGGAATTCTGGAA+TGG | + | chr1_3:51683746-51683765 | Msa0124130:CDS | 45.0% |
| GAGTTTCGTGCAACCAAATG+AGG | - | chr1_3:51683807-51683826 | None:intergenic | 45.0% | |
| GGTATCAAGAGGCCTAAAAC+TGG | + | chr1_3:51684850-51684869 | Msa0124130:CDS | 45.0% | |
| ACAAGAGCAATGTGCCTACT+TGG | + | chr1_3:51685156-51685175 | Msa0124130:CDS | 45.0% | |
| GACCTATCACTATCTAGGCT+TGG | + | chr1_3:51685244-51685263 | Msa0124130:intron | 45.0% | |
| TCCCAAGCCTAGATAGTGAT+AGG | - | chr1_3:51685249-51685268 | None:intergenic | 45.0% | |
| !!! | CCATGAGGAAAGGGTGTTTT+TGG | - | chr1_3:51685729-51685748 | None:intergenic | 45.0% |
| CCAAAAACACCCTTTCCTCA+TGG | + | chr1_3:51685726-51685745 | Msa0124130:CDS | 45.0% | |
| AAACACCCTTTCCTCATGGT+TGG | + | chr1_3:51685730-51685749 | Msa0124130:CDS | 45.0% | |
| CCTTTCCAACCATGAGGAAA+GGG | - | chr1_3:51685738-51685757 | None:intergenic | 45.0% | |
| ACCTTTCCAACCATGAGGAA+AGG | - | chr1_3:51685739-51685758 | None:intergenic | 45.0% | |
| ! | ACAGTGGGTTTCACAAGAAG+AGG | + | chr1_3:51685774-51685793 | Msa0124130:CDS | 45.0% |
| !!! | TTATATTAATACTTTTAATA+AGG | + | chr1_3:51684507-51684526 | Msa0124130:intron | 5.0% |
| !! | TATTTAAATATTAAAAAAAG+TGG | - | chr1_3:51685357-51685376 | None:intergenic | 5.0% |
| GGACCTATCATAGTAGGTGC+TGG | + | chr1_3:51683240-51683259 | Msa0124130:CDS | 50.0% | |
| GGACCAGCACCTACTATGAT+AGG | - | chr1_3:51683246-51683265 | None:intergenic | 50.0% | |
| !! | ATAGTAGGTGCTGGTCCTTC+AGG | + | chr1_3:51683249-51683268 | Msa0124130:CDS | 50.0% |
| GCAGCTACTGCTATACCTGA+AGG | - | chr1_3:51683267-51683286 | None:intergenic | 50.0% | |
| CAATGTGCCTACTTGGCTCA+AGG | + | chr1_3:51685163-51685182 | Msa0124130:CDS | 50.0% | |
| CCCTTTCCTCATGGTTGGAA+AGG | + | chr1_3:51685735-51685754 | Msa0124130:CDS | 50.0% | |
| TGCTCACCTTTCCAACCATG+AGG | - | chr1_3:51685744-51685763 | None:intergenic | 50.0% | |
| CATGGTTGGAAAGGTGAGCA+AGG | + | chr1_3:51685744-51685763 | Msa0124130:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 51683198 | 51685914 | 51683198 | ID=Msa0124130;Name=Msa0124130 |
| chr1_3 | mRNA | 51683198 | 51685914 | 51683198 | ID=Msa0124130-mRNA-1;Parent=Msa0124130;Name=Msa0124130-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|1|1|4|0|406 |
| chr1_3 | exon | 51683198 | 51683827 | 51683198 | ID=Msa0124130-mRNA-1:exon:15757;Parent=Msa0124130-mRNA-1 |
| chr1_3 | exon | 51684709 | 51684957 | 51684709 | ID=Msa0124130-mRNA-1:exon:15758;Parent=Msa0124130-mRNA-1 |
| chr1_3 | exon | 51685062 | 51685184 | 51685062 | ID=Msa0124130-mRNA-1:exon:15759;Parent=Msa0124130-mRNA-1 |
| chr1_3 | exon | 51685696 | 51685914 | 51685696 | ID=Msa0124130-mRNA-1:exon:15760;Parent=Msa0124130-mRNA-1 |
| chr1_3 | CDS | 51683198 | 51683827 | 51683198 | ID=Msa0124130-mRNA-1:cds;Parent=Msa0124130-mRNA-1 |
| chr1_3 | CDS | 51684709 | 51684957 | 51684709 | ID=Msa0124130-mRNA-1:cds;Parent=Msa0124130-mRNA-1 |
| chr1_3 | CDS | 51685062 | 51685184 | 51685062 | ID=Msa0124130-mRNA-1:cds;Parent=Msa0124130-mRNA-1 |
| chr1_3 | CDS | 51685696 | 51685914 | 51685696 | ID=Msa0124130-mRNA-1:cds;Parent=Msa0124130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
