AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0782230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0782230 MtrunA17_Chr5g0439271 86.472 547 24 3 120 619 4 547 0.0 951
Msa0782230 MtrunA17_Chr7g0250371 52.859 717 212 16 13 613 19 725 0.0 674
Msa0782230 MtrunA17_Chr7g0250391 52.427 721 221 16 8 613 10 723 0.0 653
Msa0782230 MtrunA17_Chr7g0250481 50.207 725 224 14 21 615 23 740 0.0 649
Msa0782230 MtrunA17_Chr7g0250411 51.114 718 222 18 13 613 19 724 0.0 633
Msa0782230 MtrunA17_Chr7g0250331 51.918 730 206 18 22 613 25 747 0.0 633
Msa0782230 MtrunA17_Chr3g0120521 46.898 693 249 15 28 613 29 709 0.0 566
Msa0782230 MtrunA17_Chr4g0057531 47.076 701 259 14 23 618 27 720 0.0 561
Msa0782230 MtrunA17_Chr4g0057481 48.403 626 243 12 66 623 25 638 1.65e-180 528
Msa0782230 MtrunA17_Chr4g0057471 47.559 635 245 15 66 624 43 665 1.82e-179 526
Msa0782230 MtrunA17_Chr4g0076611 46.935 620 241 13 66 613 32 635 7.57e-177 518
Msa0782230 MtrunA17_Chr4g0057461 48.850 565 217 12 117 624 35 584 3.85e-169 496
Msa0782230 MtrunA17_Chr4g0057511 49.457 552 218 10 116 623 30 564 4.99e-166 488
Msa0782230 MtrunA17_Chr4g0057491 48.718 546 223 10 116 618 34 565 4.74e-160 473
Msa0782230 MtrunA17_Chr5g0423261 48.519 540 223 9 116 613 34 560 1.74e-158 469
Msa0782230 MtrunA17_Chr4g0037221 39.816 653 294 18 39 613 72 703 2.10e-134 411
Msa0782230 MtrunA17_Chr7g0250461 50.000 462 148 12 13 403 19 468 3.06e-131 394
Msa0782230 MtrunA17_Chr5g0401511 41.558 616 267 19 71 613 105 700 1.23e-130 401
Msa0782230 MtrunA17_Chr4g0053781 36.515 723 327 21 13 624 14 715 1.51e-129 399
Msa0782230 MtrunA17_Chr4g0020651 41.509 636 278 20 52 613 81 696 5.84e-129 397
Msa0782230 MtrunA17_Chr2g0300751 39.159 618 276 16 62 603 106 699 3.12e-126 390
Msa0782230 MtrunA17_Chr1g0204321 40.164 610 279 16 66 603 112 707 9.57e-124 384
Msa0782230 MtrunA17_Chr1g0152771 38.499 613 284 17 72 608 99 694 3.74e-123 382
Msa0782230 MtrunA17_Chr4g0026641 37.819 706 282 24 28 613 26 694 9.90e-120 373
Msa0782230 MtrunA17_Chr3g0136151 38.889 612 284 16 66 603 95 690 4.41e-118 369
Msa0782230 MtrunA17_Chr5g0447171 45.033 453 154 7 243 613 6 445 6.71e-117 358
Msa0782230 MtrunA17_Chr8g0369891 38.953 611 269 20 66 603 104 683 9.47e-115 360
Msa0782230 MtrunA17_Chr5g0407701 39.159 618 279 23 66 612 99 690 3.48e-113 356
Msa0782230 MtrunA17_Chr7g0262161 37.232 607 294 15 74 612 105 692 3.28e-112 353
Msa0782230 MtrunA17_Chr8g0344331 36.940 647 293 21 53 613 99 716 7.46e-112 353
Msa0782230 MtrunA17_Chr4g0070391 37.559 639 298 22 61 623 86 699 9.39e-112 352
Msa0782230 MtrunA17_Chr8g0351011 38.040 602 283 15 66 607 114 685 1.47e-111 352
Msa0782230 MtrunA17_Chr3g0143251 38.534 641 289 20 66 620 101 722 7.01e-110 347
Msa0782230 MtrunA17_Chr2g0285121 38.312 616 287 17 70 604 104 707 2.05e-109 347
Msa0782230 MtrunA17_Chr8g0354741 39.888 534 262 12 127 618 64 580 2.06e-109 342
Msa0782230 MtrunA17_Chr8g0344971 39.116 611 291 18 75 618 105 701 1.26e-108 344
Msa0782230 MtrunA17_Chr2g0285111 37.622 614 293 15 70 604 108 710 3.50e-108 343
Msa0782230 MtrunA17_Chr3g0134621 35.814 645 288 17 52 618 84 680 5.35e-108 342
Msa0782230 MtrunA17_Chr7g0246461 37.377 610 262 21 75 614 120 679 1.56e-104 333
Msa0782230 MtrunA17_Chr8g0354771 34.419 706 337 20 24 618 20 710 6.85e-104 332
Msa0782230 MtrunA17_Chr8g0334521 34.143 700 344 24 5 620 15 681 8.60e-104 331
Msa0782230 MtrunA17_Chr7g0227991 36.926 631 296 23 53 621 92 682 1.78e-103 330
Msa0782230 MtrunA17_Chr7g0246451 36.542 613 287 20 67 613 109 685 1.33e-102 328
Msa0782230 MtrunA17_Chr1g0146271 34.483 696 332 26 1 608 8 667 1.01e-101 325
Msa0782230 MtrunA17_Chr8g0377961 37.438 609 282 22 73 604 119 705 5.57e-101 325
Msa0782230 MtrunA17_Chr6g0470851 35.201 696 315 27 3 603 4 658 1.08e-100 322
Msa0782230 MtrunA17_Chr4g0057061 37.833 600 271 18 71 603 138 702 1.57e-99 320
Msa0782230 MtrunA17_Chr6g0470881 36.557 610 293 21 50 603 87 658 3.67e-99 318
Msa0782230 MtrunA17_Chr1g0170081 34.052 696 333 24 1 608 8 665 3.30e-98 316
Msa0782230 MtrunA17_Chr8g0334491 36.877 602 269 22 66 603 102 656 1.28e-97 314
Msa0782230 MtrunA17_Chr3g0079971 36.437 623 290 23 50 608 86 666 1.38e-96 311
Msa0782230 MtrunA17_Chr1g0146251 34.488 693 324 26 8 608 15 669 3.04e-95 308
Msa0782230 MtrunA17_Chr8g0376841 38.153 498 216 13 66 501 118 585 6.36e-95 303
Msa0782230 MtrunA17_Chr7g0266051 35.691 622 294 19 66 618 66 650 1.18e-94 306
Msa0782230 MtrunA17_Chr8g0345971 36.960 625 272 20 74 616 117 701 1.83e-94 307
Msa0782230 MtrunA17_Chr1g0189251 36.244 607 303 21 74 619 116 699 3.53e-93 303
Msa0782230 MtrunA17_Chr6g0480721 34.861 611 280 18 52 623 21 552 4.99e-91 294
Msa0782230 MtrunA17_Chr5g0398241 35.621 612 288 16 71 613 117 691 1.56e-90 296
Msa0782230 MtrunA17_Chr8g0345991 34.959 615 302 21 74 616 108 696 1.05e-89 294
Msa0782230 MtrunA17_Chr1g0189561 35.831 614 289 22 75 614 115 697 7.78e-89 292
Msa0782230 MtrunA17_Chr5g0398401 35.197 608 296 16 71 613 117 691 1.16e-88 291
Msa0782230 MtrunA17_Chr5g0398351 36.799 606 289 17 71 613 868 1442 6.91e-88 299
Msa0782230 MtrunA17_Chr5g0398351 36.066 610 287 18 71 613 98 671 1.67e-83 286
Msa0782230 MtrunA17_Chr8g0345981 35.938 640 287 26 74 624 110 715 8.70e-88 289
Msa0782230 MtrunA17_Chr5g0398331 35.987 603 286 17 75 612 120 687 1.27e-87 288
Msa0782230 MtrunA17_Chr5g0398311 36.033 605 286 15 66 607 111 677 1.01e-84 281
Msa0782230 MtrunA17_Chr7g0248871 34.803 635 294 25 52 603 94 691 6.67e-84 279
Msa0782230 MtrunA17_Chr7g0276151 35.400 613 297 21 74 616 116 699 8.52e-84 278
Msa0782230 MtrunA17_Chr2g0303881 35.207 605 320 17 74 619 80 671 5.07e-83 276
Msa0782230 MtrunA17_Chr8g0345961 35.202 642 292 22 74 624 106 714 1.28e-80 270
Msa0782230 MtrunA17_Chr2g0301011 36.329 523 254 14 66 559 6 478 1.09e-79 260
Msa0782230 MtrunA17_Chr7g0261691 48.780 287 137 5 127 410 52 331 3.03e-79 254
Msa0782230 MtrunA17_Chr7g0250441 62.911 213 69 4 411 613 11 223 7.75e-74 239
Msa0782230 MtrunA17_Chr7g0261701 51.948 231 87 5 409 620 22 247 1.33e-71 233
Msa0782230 MtrunA17_Chr7g0248861 34.078 537 260 16 66 534 112 622 5.07e-71 246
Msa0782230 MtrunA17_Chr7g0248861 40.000 240 107 7 98 309 629 859 1.57e-33 137
Msa0782230 MtrunA17_Chr3g0103071 44.444 288 117 4 215 464 1 283 1.62e-69 227
Msa0782230 MtrunA17_Chr4g0071871 34.574 564 271 20 128 610 206 752 2.69e-69 240
Msa0782230 MtrunA17_Chr2g0298601 33.925 563 276 20 128 610 206 752 4.40e-63 223
Msa0782230 MtrunA17_Chr4g0035881 41.210 347 159 9 163 497 4 317 5.56e-63 211
Msa0782230 MtrunA17_Chr5g0439281 71.053 152 6 1 1 114 1 152 9.67e-63 206
Msa0782230 MtrunA17_Chr3g0103061 45.833 264 82 6 1 204 1 263 1.00e-61 206
Msa0782230 MtrunA17_Chr3g0143241 38.227 361 177 10 66 396 101 445 5.85e-60 209
Msa0782230 MtrunA17_Chr4g0075331 30.200 649 328 21 71 613 50 679 3.06e-58 208
Msa0782230 MtrunA17_Chr8g0380961 30.919 566 294 19 127 610 234 784 2.67e-52 193
Msa0782230 MtrunA17_Chr3g0105461 47.325 243 108 5 66 308 100 322 8.48e-52 182
Msa0782230 MtrunA17_Chr3g0105451 42.616 237 98 7 409 620 12 235 5.00e-49 172
Msa0782230 MtrunA17_Chr8g0346361 42.986 221 106 5 411 618 229 442 9.06e-49 177
Msa0782230 MtrunA17_Chr8g0346361 45.274 201 91 7 127 326 25 207 4.65e-41 156
Msa0782230 MtrunA17_Chr4g0026651 38.333 300 115 8 66 308 18 304 4.28e-48 171
Msa0782230 MtrunA17_Chr2g0301031 48.925 186 84 3 427 608 3 181 3.60e-47 166
Msa0782230 MtrunA17_Chr2g0312861 45.556 180 88 2 427 603 3 175 5.92e-45 162
Msa0782230 MtrunA17_Chr3g0097061 36.709 316 160 11 66 363 6 299 1.04e-43 162
Msa0782230 MtrunA17_Chr3g0097061 43.103 116 59 1 456 571 330 438 1.98e-26 112
Msa0782230 MtrunA17_Chr4g0026661 46.154 195 91 6 427 614 14 201 4.65e-43 155
Msa0782230 MtrunA17_Chr2g0301911 39.407 236 122 6 127 362 51 265 5.20e-39 147
Msa0782230 MtrunA17_Chr5g0436021 44.706 170 82 2 128 297 31 188 2.41e-38 140
Msa0782230 MtrunA17_Chr2g0312841 44.186 172 80 3 128 299 31 186 8.39e-35 130
Msa0782230 MtrunA17_Chr2g0301921 44.898 147 70 3 466 608 1 140 4.76e-33 126
Msa0782230 MtrunA17_Chr3g0142981 43.312 157 59 1 152 308 48 174 3.61e-29 114
Msa0782230 MtrunA17_Chr2g0302951 32.836 335 180 12 65 364 139 463 4.59e-27 117
Msa0782230 MtrunA17_Chr2g0302951 33.937 221 118 7 413 610 562 777 2.39e-21 99.0
Msa0782230 MtrunA17_Chr5g0447151 43.243 148 46 1 5 114 6 153 1.22e-25 103
Msa0782230 MtrunA17_Chr4g0057501 47.581 124 26 2 29 114 6 128 1.27e-25 102
Msa0782230 MtrunA17_Chr3g0103081 55.952 84 36 1 532 614 1 84 2.23e-25 102
Msa0782230 MtrunA17_Chr4g0071191 32.178 202 117 4 413 602 57 250 2.36e-25 105
Msa0782230 MtrunA17_Chr5g0418921 48.000 125 56 2 410 525 10 134 1.19e-24 101
Msa0782230 MtrunA17_Chr3g0143231 53.333 90 34 2 415 497 1 89 6.78e-22 90.5
Msa0782230 MtrunA17_Chr3g0142971 50.000 86 35 2 415 493 1 85 1.02e-18 81.3
Msa0782230 MtrunA17_Chr2g0301021 36.184 152 72 5 221 363 189 324 8.08e-17 82.8
Msa0782230 MtrunA17_Chr5g0398341 50.000 84 42 0 466 549 1 84 1.08e-16 75.9
Msa0782230 MtrunA17_Chr3g0142961 37.778 135 66 5 507 623 4 138 1.24e-15 74.3
Msa0782230 MtrunA17_Chr5g0434941 50.000 74 36 1 220 292 1 74 1.48e-13 66.2
Msa0782230 MtrunA17_Chr3g0077671 43.529 85 46 2 444 526 224 308 4.92e-13 70.5
Msa0782230 MtrunA17_Chr4g0057521 53.226 62 28 1 66 127 50 110 1.65e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0782230 AT2G04160.1 46.647 686 257 10 29 612 31 709 0.0 579
Msa0782230 AT5G59810.1 45.339 708 268 14 25 624 37 733 0.0 546
Msa0782230 AT5G67360.1 40.294 613 284 14 66 612 96 692 6.09e-132 405
Msa0782230 AT2G05920.1 38.540 685 304 21 18 607 19 681 2.70e-128 395
Msa0782230 AT4G34980.1 38.424 622 293 16 66 613 89 694 1.02e-127 394
Msa0782230 AT5G51750.1 40.033 612 277 17 66 603 110 705 9.97e-122 379
Msa0782230 AT3G14240.1 37.959 627 297 18 66 613 93 706 4.00e-117 367
Msa0782230 AT1G01900.1 40.325 615 271 18 75 614 119 712 7.72e-116 363
Msa0782230 AT3G14067.1 36.817 622 297 18 66 612 100 700 5.04e-114 359
Msa0782230 AT5G59190.1 38.498 626 275 22 66 622 63 647 8.99e-113 353
Msa0782230 AT5G45650.2 36.219 693 328 20 17 613 49 723 6.73e-111 351
Msa0782230 AT5G45650.1 36.219 693 328 20 17 613 49 723 6.73e-111 351
Msa0782230 AT1G20160.2 38.226 620 297 19 66 613 59 664 1.15e-110 349
Msa0782230 AT5G59100.1 38.350 618 272 20 66 615 102 678 3.09e-110 348
Msa0782230 AT1G20160.1 38.226 620 297 19 66 613 98 703 4.22e-110 348
Msa0782230 AT1G04110.1 35.566 627 305 17 74 623 110 714 7.94e-109 345
Msa0782230 AT5G59120.1 37.599 633 272 19 52 612 84 665 3.92e-108 342
Msa0782230 AT1G20150.1 37.327 651 298 20 66 626 96 726 5.00e-107 341
Msa0782230 AT5G59090.1 38.376 628 274 22 52 612 85 666 1.08e-106 338
Msa0782230 AT5G59090.3 38.118 627 275 22 52 612 85 664 2.82e-105 335
Msa0782230 AT5G59090.2 37.959 627 273 21 52 612 85 661 4.01e-105 334
Msa0782230 AT5G59130.3 37.785 614 291 20 52 612 49 624 1.33e-103 329
Msa0782230 AT1G32970.1 35.618 671 322 23 15 603 10 652 1.45e-103 330
Msa0782230 AT4G26330.2 38.073 633 283 20 66 612 52 661 1.46e-103 330
Msa0782230 AT5G58830.1 37.239 623 268 19 50 612 84 643 2.58e-103 329
Msa0782230 AT5G59130.2 37.645 603 297 17 52 612 88 653 2.60e-103 330
Msa0782230 AT5G59130.4 37.785 614 291 20 52 612 88 663 3.86e-103 329
Msa0782230 AT3G46840.1 38.288 619 294 23 52 612 87 675 5.16e-103 329
Msa0782230 AT5G59130.1 37.684 613 289 20 52 612 88 659 9.28e-103 328
Msa0782230 AT4G26330.1 37.249 647 283 20 66 612 52 675 3.15e-101 325
Msa0782230 AT3G46850.1 37.600 625 291 23 52 612 86 675 7.24e-101 323
Msa0782230 AT5G03620.1 34.899 745 304 28 7 619 8 703 1.02e-99 321
Msa0782230 AT5G45640.1 35.563 613 284 16 66 585 61 655 4.01e-99 319
Msa0782230 AT4G10520.1 34.081 713 313 22 6 603 4 674 4.91e-98 317
Msa0782230 AT4G10550.1 33.609 726 340 25 3 613 9 707 3.16e-97 315
Msa0782230 AT5G58820.1 37.294 606 259 18 66 612 97 640 3.23e-97 313
Msa0782230 AT4G10550.3 33.989 712 328 25 17 613 39 723 6.11e-97 315
Msa0782230 AT5G58840.1 36.782 609 285 18 52 612 88 644 6.56e-97 312
Msa0782230 AT1G32940.1 34.174 714 304 26 28 613 28 703 1.78e-96 313
Msa0782230 AT4G00230.1 36.928 612 277 19 66 607 105 677 2.80e-96 311
Msa0782230 AT1G32960.1 33.807 704 320 28 28 613 31 706 1.15e-95 311
Msa0782230 AT1G66210.1 33.675 683 322 20 19 603 30 679 3.21e-93 304
Msa0782230 AT1G32940.4 35.499 631 285 23 73 613 54 652 9.21e-93 301
Msa0782230 AT1G32940.2 35.499 631 285 23 73 613 54 652 9.21e-93 301
Msa0782230 AT1G32950.1 33.813 695 316 24 25 603 25 691 1.47e-92 302
Msa0782230 AT4G10510.3 33.147 715 330 21 17 613 22 706 2.12e-92 302
Msa0782230 AT4G10550.4 34.951 618 305 21 73 613 54 651 3.87e-92 300
Msa0782230 AT4G10550.2 34.951 618 305 21 73 613 54 651 3.87e-92 300
Msa0782230 AT4G21630.1 34.040 708 325 24 6 603 7 682 6.00e-92 300
Msa0782230 AT4G10510.1 33.191 702 321 21 30 613 23 694 5.67e-91 298
Msa0782230 AT4G10540.1 33.147 715 332 24 17 613 18 704 1.26e-90 297
Msa0782230 AT4G21640.1 34.443 691 304 24 8 603 20 656 9.51e-90 294
Msa0782230 AT1G32950.2 35.468 609 293 22 73 603 54 640 5.03e-89 292
Msa0782230 AT4G21650.1 34.207 687 312 26 24 603 36 689 5.24e-89 293
Msa0782230 AT4G10510.2 34.450 627 307 19 67 613 33 635 1.79e-88 290
Msa0782230 AT4G10510.4 34.450 627 307 19 67 613 48 650 3.09e-88 290
Msa0782230 AT5G11940.1 32.787 671 332 24 28 603 36 682 2.23e-87 288
Msa0782230 AT1G66220.1 33.138 682 313 19 25 603 33 674 1.12e-86 286
Msa0782230 AT4G10530.1 32.486 708 330 21 1 603 1 665 2.69e-86 285
Msa0782230 AT4G15040.2 35.417 624 292 23 52 612 49 624 3.01e-82 273
Msa0782230 AT4G15040.1 35.417 624 292 23 52 612 49 624 3.01e-82 273
Msa0782230 AT5G03620.2 34.046 608 246 20 7 498 8 576 1.59e-81 268
Msa0782230 AT4G00230.2 37.349 498 218 14 66 500 105 571 3.61e-80 265
Msa0782230 AT5G58840.3 37.725 501 219 16 52 508 88 539 1.08e-76 254
Msa0782230 AT1G32940.3 33.662 609 250 21 28 515 28 603 2.03e-76 255
Msa0782230 AT5G67090.1 33.652 627 300 25 74 624 99 685 3.32e-74 252
Msa0782230 AT4G21323.1 32.303 712 315 26 30 625 81 741 2.18e-73 251
Msa0782230 AT4G21326.1 31.754 570 323 17 66 585 47 600 2.08e-69 238
Msa0782230 AT4G30020.3 32.028 562 289 19 128 610 203 750 4.42e-62 221
Msa0782230 AT4G30020.1 32.028 562 289 19 128 610 203 750 4.42e-62 221
Msa0782230 AT4G30020.4 32.028 562 289 19 128 610 203 750 4.42e-62 221
Msa0782230 AT4G30020.2 32.028 562 289 19 128 610 203 750 4.42e-62 221
Msa0782230 AT1G30600.1 31.818 594 295 20 106 607 184 759 4.62e-62 221
Msa0782230 AT1G20160.3 37.170 417 193 13 66 426 98 501 9.84e-61 212
Msa0782230 AT2G19170.1 29.955 671 329 26 69 623 117 762 1.59e-60 216
Msa0782230 AT2G19170.2 29.955 671 329 26 69 623 117 762 1.59e-60 216
Msa0782230 AT4G20430.3 29.003 662 336 22 65 612 148 789 2.38e-57 208
Msa0782230 AT4G20430.1 29.003 662 336 22 65 612 148 789 2.38e-57 208
Msa0782230 AT5G44530.1 31.327 565 293 17 127 610 222 772 9.08e-57 206
Msa0782230 AT2G39850.1 29.714 700 346 33 27 612 27 694 1.90e-56 204
Msa0782230 AT4G20430.2 29.624 638 339 21 65 612 148 765 5.23e-56 204
Msa0782230 AT1G62340.1 29.798 594 306 21 128 623 220 800 5.16e-54 198
Msa0782230 AT5G44530.2 30.000 590 293 18 127 610 222 797 5.65e-52 192
Msa0782230 AT5G58840.2 34.660 427 193 16 52 442 88 464 5.06e-46 170
Msa0782230 AT1G32980.1 44.898 147 77 3 460 603 1 146 5.63e-32 122
Msa0782230 AT5G44530.3 34.576 295 171 10 127 407 222 508 2.62e-30 126
Msa0782230 AT5G59110.1 36.735 98 56 4 521 612 7 104 6.77e-11 62.0

Find 151 sgRNAs with CRISPR-Local

Find 282 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCAAGTTCATTGACATTTA+AGG 0.106897 5_2:-65113788 Msa0782230:exon
GGCTTTGAAGCTGCTCTTGC+AGG 0.182619 5_2:-65115506 Msa0782230:CDS
TTCAACAACTTGAAGAATTA+AGG 0.201472 5_2:-65113821 Msa0782230:CDS
TCATTGACATTTAAGGAAAT+TGG 0.202709 5_2:-65113781 Msa0782230:exon
CTCACAGCACGTGACTTTAT+TGG 0.216825 5_2:-65116385 Msa0782230:CDS
AGCACATGCTTACCTTTCTA+AGG 0.225071 5_2:+65118424 None:intergenic
GATTTACTTGCTTCAATCTT+AGG 0.232077 5_2:-65118212 Msa0782230:CDS
CCTCATGTTGCTGGCATTGC+TGG 0.232103 5_2:-65114439 Msa0782230:CDS
TAATTGTGCTTATGGTTATT+TGG 0.237671 5_2:-65113575 Msa0782230:three_prime_UTR
TGATGTGATTTCAACTTCTT+TGG 0.256845 5_2:-65116158 Msa0782230:CDS
GTAAACAAAGCTTCAATATA+TGG 0.264926 5_2:+65116124 None:intergenic
GATGAAAACCCAGCCATAAT+TGG 0.268338 5_2:+65115119 None:intergenic
ATCATTGCTAATTTAGATTC+AGG 0.275726 5_2:-65117775 Msa0782230:intron
CTTTGACCAACATACTTTGT+AGG 0.283223 5_2:+65116249 None:intergenic
CATATTGTGATTCGTAGTTT+TGG 0.287628 5_2:+65116428 None:intergenic
ACAAGGTCATGGGACTTTCT+TGG 0.296242 5_2:-65117865 Msa0782230:CDS
TCACCTGATGTAACAATATT+CGG 0.298451 5_2:-65116322 Msa0782230:CDS
GTTGTGGTTGTTTGTTCTGC+TGG 0.310740 5_2:-65116058 Msa0782230:CDS
ATATGATATCCATACATTAT+AGG 0.313019 5_2:+65113453 None:intergenic
ATTAAAGCCATCTCCAATTA+TGG 0.319155 5_2:-65115132 Msa0782230:CDS
ACAAACTATAGAAAACTAAT+TGG 0.321436 5_2:-65116466 Msa0782230:CDS
TTTACTGATGGAATTTCAAT+TGG 0.333362 5_2:-65116106 Msa0782230:CDS
TTTGTTAGTCATATTTCTAT+TGG 0.336827 5_2:-65115953 Msa0782230:CDS
ATGTCTTGTCCTCATGTTGC+TGG 0.337178 5_2:-65114448 Msa0782230:CDS
AGATCATCAAGGGAGGGATT+TGG 0.343007 5_2:+65118260 None:intergenic
ATAGCGACTCCATTTGAATA+TGG 0.349781 5_2:-65114113 Msa0782230:CDS
CAAGTCAATTTCCCAAATAC+TGG 0.351450 5_2:+65113700 None:intergenic
CAGATAATTCTAGAGGCAAT+AGG 0.359087 5_2:-65113742 Msa0782230:three_prime_UTR
TTGCAGCTAGTACAATTGAT+AGG 0.366041 5_2:-65115979 Msa0782230:CDS
CGGTACGAGTAACGTTTATA+AGG 0.370101 5_2:+65113883 None:intergenic
GTTTGTTCTGCTGGGAATGA+TGG 0.375656 5_2:-65116049 Msa0782230:CDS
ACTCCATTTGAATATGGTTC+TGG 0.377150 5_2:-65114107 Msa0782230:CDS
GAATTTCTCTTGATTCTGCT+TGG 0.392718 5_2:-65117825 Msa0782230:CDS
GTTCCTTGTTGCAGATTGTA+AGG 0.394947 5_2:+65114475 None:intergenic
GGGAAATTGACTTGGACAAA+TGG 0.397704 5_2:-65113691 Msa0782230:three_prime_UTR
TGAGCTTACAAGACTACTAT+AGG 0.403036 5_2:+65113649 None:intergenic
GCTTGGTGGAAGGCAAGATT+TGG 0.411231 5_2:-65117808 Msa0782230:CDS
GATGTGATTTCAACTTCTTT+GGG 0.412723 5_2:-65116157 Msa0782230:CDS
TCCTTAAATGTCAATGAACT+TGG 0.416086 5_2:+65113787 None:intergenic
CAAAACTACGAATCACAATA+TGG 0.420918 5_2:-65116427 Msa0782230:CDS
TTATCGAACGCGTCTCTGAT+TGG 0.421421 5_2:+65114137 None:intergenic
AATGGTTATCCTATAATGTA+TGG 0.428863 5_2:-65113462 None:intergenic
TCAAGACACTTCATCCTAGT+TGG 0.433278 5_2:-65114411 Msa0782230:CDS
CTTGATCCTACCAAAGTAAA+GGG 0.434353 5_2:-65115578 Msa0782230:CDS
TATGTGTGTAATTGTGCTTA+TGG 0.441101 5_2:-65113583 Msa0782230:three_prime_UTR
CTTAGTAAAGGCTTACCATC+AGG 0.444069 5_2:-65115807 Msa0782230:CDS
CCTAACCTTGCAATGGATCC+AGG 0.444320 5_2:-65114074 Msa0782230:CDS
TCACGTGCTGTGAGGTTTGA+GGG 0.445205 5_2:+65116394 None:intergenic
CAGTATTTGGGAAATTGACT+TGG 0.447547 5_2:-65113699 Msa0782230:three_prime_UTR
ATGGCAGATTTGATAGCAGC+TGG 0.451272 5_2:+65114385 None:intergenic
ATTGAAGCTTTGTTTACTGA+TGG 0.454609 5_2:-65116118 Msa0782230:CDS
TAATATCTTTCCCTTTACTT+TGG 0.455724 5_2:+65115568 None:intergenic
TAAATCATAATGTGAATTTG+TGG 0.457110 5_2:+65118229 None:intergenic
AAGCCATCTCCAATTATGGC+TGG 0.460623 5_2:-65115128 Msa0782230:CDS
GTCATGGGACTTTCTTGGAC+TGG 0.470096 5_2:-65117860 Msa0782230:CDS
TTGCCGAATATTGTTACATC+AGG 0.471070 5_2:+65116319 None:intergenic
TTTCTCTTGATTCTGCTTGG+TGG 0.474583 5_2:-65117822 Msa0782230:CDS
GTAGACATATATTGTATACT+TGG 0.475700 5_2:-65118300 Msa0782230:intron
TCCATACTTGCACCAGGTAA+AGG 0.476009 5_2:+65115419 None:intergenic
TTGTGGTTGTTTGTTCTGCT+GGG 0.479274 5_2:-65116057 Msa0782230:CDS
TCTTGATTCTGCTTGGTGGA+AGG 0.479653 5_2:-65117818 Msa0782230:CDS
GCTGCTCTTGCAGGAGCTGT+AGG 0.480239 5_2:-65115497 Msa0782230:CDS
ACTCGTACCGTCACAAATGT+TGG 0.481576 5_2:-65113870 Msa0782230:CDS
CTTAGATCATAAACAAGTCC+TGG 0.482949 5_2:+65114056 None:intergenic
CGAGTAACGTTTATAAGGTT+CGG 0.483106 5_2:+65113888 None:intergenic
ACATAACATAGGAATGTGTT+AGG 0.483110 5_2:+65116490 None:intergenic
CAGCCTGACATAACTGCTCC+TGG 0.483975 5_2:-65114568 Msa0782230:CDS
TGTATTGAACAATGTTCTGC+TGG 0.484973 5_2:-65113510 Msa0782230:three_prime_UTR
ACAATATTCGGCAACGGTAA+CGG 0.486416 5_2:-65116310 Msa0782230:CDS
CGATTATACACAGTAATTGA+AGG 0.493869 5_2:+65113915 None:intergenic
TATAGTTTGTCACATAACAT+AGG 0.494734 5_2:+65116479 None:intergenic
GTGATCAATGATGAGAAAAG+TGG 0.495030 5_2:-65115467 Msa0782230:CDS
TGCTCCTGGAGTGAACATAT+TGG 0.499041 5_2:-65114554 Msa0782230:CDS
GGAATGATGGACCTGCTCAT+AGG 0.501150 5_2:-65116036 Msa0782230:CDS
ACTTGATCCTACCAAAGTAA+AGG 0.503049 5_2:-65115579 Msa0782230:CDS
TTACTGATGGAATTTCAATT+GGG 0.504502 5_2:-65116105 Msa0782230:CDS
TGTCCAGAACCATATTCAAA+TGG 0.505775 5_2:+65114104 None:intergenic
ATCTTTCCCTTTACTTTGGT+AGG 0.511771 5_2:+65115572 None:intergenic
GTCACGTGCTGTGAGGTTTG+AGG 0.515710 5_2:+65116393 None:intergenic
TGGTAAGCCTTTACTAAGAC+TGG 0.517145 5_2:+65115812 None:intergenic
CTGCTCTTGCAGGAGCTGTA+GGG 0.519097 5_2:-65115496 Msa0782230:CDS
CAGGGTGCCAGTCTTAGTAA+AGG 0.519655 5_2:-65115819 Msa0782230:CDS
CTCGTACCGTCACAAATGTT+GGG 0.521038 5_2:-65113869 Msa0782230:CDS
TAGACATATATTGTATACTT+GGG 0.521854 5_2:-65118299 Msa0782230:CDS
AACGGTAACGGCACAGCGAA+AGG 0.522680 5_2:-65116298 Msa0782230:CDS
TACTTACGCATCTTGAATTG+TGG 0.522759 5_2:+65115728 None:intergenic
TTTGATCAAGCTATATATGA+TGG 0.524554 5_2:-65116184 Msa0782230:CDS
TGTTGGTCAAAGACAGATGC+AGG 0.529348 5_2:-65116238 Msa0782230:CDS
ATAGCAGCTGGGCTCCAACT+AGG 0.530211 5_2:+65114397 None:intergenic
ACTCCAGGAGCAGTTATGTC+AGG 0.531162 5_2:+65114565 None:intergenic
CAGTAATTGAAGGATAATTG+AGG 0.532746 5_2:+65113925 None:intergenic
TAGGATGCTACACGTGCTCT+AGG 0.537953 5_2:+65116268 None:intergenic
GTATCTGATGGTAGATTCGA+TGG 0.541870 5_2:+65114508 None:intergenic
CCTGGATCCATTGCAAGGTT+AGG 0.548244 5_2:+65114074 None:intergenic
GCACGTGACTTTATTGGCCA+TGG 0.550564 5_2:-65116379 Msa0782230:CDS
ACACACTGATGCCCTTAGAA+AGG 0.552985 5_2:-65118436 Msa0782230:intron
TACTTGCTTCAATCTTAGGA+AGG 0.554717 5_2:-65118208 Msa0782230:intron
AATATAAATTGCACACTACA+AGG 0.554754 5_2:-65117882 Msa0782230:CDS
AATTGCACACTACAAGGTCA+TGG 0.556893 5_2:-65117876 Msa0782230:CDS
TGCAGCTAGTACAATTGATA+GGG 0.556954 5_2:-65115978 Msa0782230:CDS
TTGATAATGTGTGTGTGCCA+TGG 0.557883 5_2:+65116362 None:intergenic
AACCTTTCAGATAATTCTAG+AGG 0.558240 5_2:-65113749 Msa0782230:three_prime_UTR
ATTAATGGTTGCACTGCACT+AGG 0.559723 5_2:+65115089 None:intergenic
TAAGATACCGGTAGTCATGA+TGG 0.560336 5_2:+65114366 None:intergenic
GCAGCCAATATGTTCACTCC+AGG 0.562565 5_2:+65114550 None:intergenic
GTCTCCTAGCACATATGTTG+TGG 0.564438 5_2:-65113847 Msa0782230:CDS
AGCCATCTCCAATTATGGCT+GGG 0.565576 5_2:-65115127 Msa0782230:CDS
GCTGAACCTCATCCTTTACC+TGG 0.567641 5_2:-65115431 Msa0782230:CDS
GCACATGCTTACCTTTCTAA+GGG 0.568241 5_2:+65118425 None:intergenic
ATTTCCACAACATATGTGCT+AGG 0.568399 5_2:+65113843 None:intergenic
GTGATTTCAACTTCTTTGGG+TGG 0.571887 5_2:-65116154 Msa0782230:CDS
TGCCTCTAGAATTATCTGAA+AGG 0.572152 5_2:+65113747 None:intergenic
CACACATTATCAACAGCAGC+AGG 0.573163 5_2:-65116352 Msa0782230:CDS
TTTGTAACACTCCTATGAGC+AGG 0.574321 5_2:+65116025 None:intergenic
AAATCTGCCATCATGACTAC+CGG 0.576826 5_2:-65114373 Msa0782230:intron
CTTGCACCAGGTAAAGGATG+AGG 0.586113 5_2:+65115425 None:intergenic
AACCCAGCCATAATTGGAGA+TGG 0.588591 5_2:+65115125 None:intergenic
TGGCTAACTCAAGATCATCA+AGG 0.591215 5_2:+65118249 None:intergenic
TGATGGTAGATTCGATGGAC+TGG 0.597441 5_2:+65114513 None:intergenic
TTAGTAAAGGCTTACCATCA+GGG 0.599525 5_2:-65115806 Msa0782230:CDS
TATTCAGCCTAACCTTGCAA+TGG 0.600414 5_2:-65114081 Msa0782230:CDS
ATTGCACACTACAAGGTCAT+GGG 0.603683 5_2:-65117875 Msa0782230:CDS
TGTAACAATGTATTGAACAA+TGG 0.606755 5_2:-65113480 Msa0782230:three_prime_UTR
GGAATGCGGCGTGTATCTGA+TGG 0.608485 5_2:+65114496 None:intergenic
TAGCATCCTACAAAGTATGT+TGG 0.610569 5_2:-65116255 Msa0782230:CDS
TGGTAGATTCGATGGACTGG+TGG 0.611336 5_2:+65114516 None:intergenic
CAAGTCCTGGATCCATTGCA+AGG 0.614140 5_2:+65114069 None:intergenic
GGCTAACTCAAGATCATCAA+GGG 0.615881 5_2:+65118250 None:intergenic
TACTTGGGAGGACATTCTCA+TGG 0.617129 5_2:-65118284 Msa0782230:CDS
GCAATAGGTATGCCTCCTCA+TGG 0.618674 5_2:-65113727 Msa0782230:three_prime_UTR
TCAATTACTGTGTATAATCG+AGG 0.623863 5_2:-65113912 Msa0782230:CDS
AACTCAAGATCATCAAGGGA+GGG 0.624343 5_2:+65118254 None:intergenic
GAAACAACGTCTATTGCTCA+AGG 0.634413 5_2:-65115527 Msa0782230:CDS
TTGGCATCCATACTTGCACC+AGG 0.635574 5_2:+65115413 None:intergenic
ACATATATTGTATACTTGGG+AGG 0.638598 5_2:-65118296 Msa0782230:CDS
ATTCCTTACAATCTGCAACA+AGG 0.647427 5_2:-65114478 Msa0782230:CDS
GTTGCAGATTGTAAGGAATG+CGG 0.656336 5_2:+65114482 None:intergenic
TGGCAGATTTGATAGCAGCT+GGG 0.656811 5_2:+65114386 None:intergenic
GATGTAACAATATTCGGCAA+CGG 0.657589 5_2:-65116316 Msa0782230:CDS
TAACTCAAGATCATCAAGGG+AGG 0.663086 5_2:+65118253 None:intergenic
AGGAGACCCAACATTTGTGA+CGG 0.664789 5_2:+65113863 None:intergenic
CAATAAAGTCACGTGCTGTG+AGG 0.667759 5_2:+65116386 None:intergenic
GTGTTACAAATGTAGCACCT+TGG 0.674203 5_2:-65116012 Msa0782230:CDS
GGTAACGGCACAGCGAAAGG+TGG 0.679426 5_2:-65116295 Msa0782230:CDS
AATACTGGAAAACCATGAGG+AGG 0.686042 5_2:+65113715 None:intergenic
TGTAAGCTCATAAATCTCTG+AGG 0.690050 5_2:-65113636 Msa0782230:three_prime_UTR
CCAGCAATGCCAGCAACATG+AGG 0.694690 5_2:+65114439 None:intergenic
CTATAGGACTAGTTACTCTG+TGG 0.701819 5_2:+65113665 None:intergenic
CCAAATACTGGAAAACCATG+AGG 0.707398 5_2:+65113712 None:intergenic
GCTGCAACAGTGAAAGACCA+AGG 0.714415 5_2:+65115995 None:intergenic
TGGTCAAAGACAGATGCAGG+TGG 0.723373 5_2:-65116235 Msa0782230:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATATTTAAAAGCAAAATT+TGG + chr5_2:65113614-65113633 None:intergenic 10.0%
!!! TATACGTTTATAATTAATTT+TGG + chr5_2:65114387-65114406 None:intergenic 10.0%
!!! TTTACATAAACTTATTTTAT+TGG - chr5_2:65116112-65116131 Msa0782230:CDS 10.0%
!!! TTATTTTTATATTATAATGC+AGG - chr5_2:65116767-65116786 Msa0782230:intron 10.0%
!!! AAACATGTTTTAATTAGAAA+AGG + chr5_2:65114656-65114675 None:intergenic 15.0%
!! TTTCATTAAATAATGAGAAA+GGG + chr5_2:65114698-65114717 None:intergenic 15.0%
!!! TTTTCATTAAATAATGAGAA+AGG + chr5_2:65114699-65114718 None:intergenic 15.0%
!!! ATTTGATATATTTTCTTTGA+TGG + chr5_2:65116183-65116202 None:intergenic 15.0%
!!! ATTTTTTTTAAGCAAGTTTA+GGG + chr5_2:65116271-65116290 None:intergenic 15.0%
!!! AATTTTTTTTAAGCAAGTTT+AGG + chr5_2:65116272-65116291 None:intergenic 15.0%
!!! ATTAATAATCTTTGGTATTT+TGG - chr5_2:65117230-65117249 Msa0782230:intron 15.0%
!!! CTAAATTTTGTTTTTGATTT+AGG + chr5_2:65117684-65117703 None:intergenic 15.0%
!! TAGACATATATTGTATACTT+GGG - chr5_2:65113664-65113683 Msa0782230:three_prime_UTR 20.0%
!! TAAATCATAATGTGAATTTG+TGG + chr5_2:65113737-65113756 None:intergenic 20.0%
!! TCTTACAATAAGCATATAAA+TGG - chr5_2:65113885-65113904 Msa0782230:CDS 20.0%
!! ACATTATTTATCATACTCTA+TGG - chr5_2:65114352-65114371 Msa0782230:intron 20.0%
!! ATTTATGAAGATAAGAAGTT+GGG + chr5_2:65114622-65114641 None:intergenic 20.0%
!! TATTTATGAAGATAAGAAGT+TGG + chr5_2:65114623-65114642 None:intergenic 20.0%
!!! TGAAATAAAGTACTGATATT+TGG + chr5_2:65114731-65114750 None:intergenic 20.0%
!!! ATATCTTTTTTAAGTGTGTT+TGG - chr5_2:65114986-65115005 Msa0782230:intron 20.0%
!! AAGTTATTGATAAACATCTA+CGG - chr5_2:65115360-65115379 Msa0782230:intron 20.0%
!! TAAACAAAGACAATGAATAT+AGG - chr5_2:65115413-65115432 Msa0782230:intron 20.0%
!! ACAAACTATAGAAAACTAAT+TGG - chr5_2:65115497-65115516 Msa0782230:CDS 20.0%
!!! TTTGTTAGTCATATTTCTAT+TGG - chr5_2:65116010-65116029 Msa0782230:CDS 20.0%
!! TGGTAACAAAAATTACATAA+AGG - chr5_2:65116030-65116049 Msa0782230:CDS 20.0%
!!! TAAAGGTATGAATAGTAATA+AGG - chr5_2:65116047-65116066 Msa0782230:CDS 20.0%
!! TATATTATAATGCAGGAAAA+TGG - chr5_2:65116774-65116793 Msa0782230:intron 20.0%
!! ATACTATATTACTACTTATG+TGG + chr5_2:65117022-65117041 None:intergenic 20.0%
!!! TTGTTTTTGATTTAGGTAAA+AGG + chr5_2:65117677-65117696 None:intergenic 20.0%
!!! AGTTTGTGTTTTTTTACTAA+TGG - chr5_2:65118421-65118440 Msa0782230:intron 20.0%
!! GATAGAAAAAGTTTGGTAAT+AGG + chr5_2:65113477-65113496 None:intergenic 25.0%
! GAATGATGATAGAAAAAGTT+TGG + chr5_2:65113484-65113503 None:intergenic 25.0%
! TGTATGAATGAGTATAAGAA+GGG + chr5_2:65113569-65113588 None:intergenic 25.0%
! TTTGGATATTAAGACTATAG+AGG + chr5_2:65113596-65113615 None:intergenic 25.0%
! GTAGACATATATTGTATACT+TGG - chr5_2:65113663-65113682 Msa0782230:three_prime_UTR 25.0%
! AATATAAATTGCACACTACA+AGG - chr5_2:65114081-65114100 Msa0782230:CDS 25.0%
! ATCATTGCTAATTTAGATTC+AGG - chr5_2:65114188-65114207 Msa0782230:intron 25.0%
! AGATGTTAAATAGAAGAACT+TGG - chr5_2:65114265-65114284 Msa0782230:intron 25.0%
! TTGCAAAATGTTGTATTTGA+AGG + chr5_2:65114544-65114563 None:intergenic 25.0%
! ATAGAGTAAGAAATAAATGC+TGG + chr5_2:65114594-65114613 None:intergenic 25.0%
! TTTATGAAGATAAGAAGTTG+GGG + chr5_2:65114621-65114640 None:intergenic 25.0%
! AATTTATTCCATGACTAAGA+AGG + chr5_2:65114761-65114780 None:intergenic 25.0%
!!! AGCATTGATATTGTATAGTT+GGG + chr5_2:65114877-65114896 None:intergenic 25.0%
!! TTTTCAGCTTAAACACAAAT+TGG + chr5_2:65115153-65115172 None:intergenic 25.0%
! AATTTGTGTTTAAGCTGAAA+AGG - chr5_2:65115152-65115171 Msa0782230:intron 25.0%
!! TATAGTTTGTCACATAACAT+AGG + chr5_2:65115487-65115506 None:intergenic 25.0%
! TTTGATCAAGCTATATATGA+TGG - chr5_2:65115779-65115798 Msa0782230:CDS 25.0%
! GTAAACAAAGCTTCAATATA+TGG + chr5_2:65115842-65115861 None:intergenic 25.0%
! TTTACTGATGGAATTTCAAT+TGG - chr5_2:65115857-65115876 Msa0782230:intron 25.0%
! TTACTGATGGAATTTCAATT+GGG - chr5_2:65115858-65115877 Msa0782230:intron 25.0%
!! ATTTTATTGGATCGTATTTC+AGG - chr5_2:65116125-65116144 Msa0782230:CDS 25.0%
!! TTTTATTGGATCGTATTTCA+GGG - chr5_2:65116126-65116145 Msa0782230:CDS 25.0%
! TAATATCTTTCCCTTTACTT+TGG + chr5_2:65116398-65116417 None:intergenic 25.0%
! TTGTATACCTTGAGTATTAA+TGG + chr5_2:65116892-65116911 None:intergenic 25.0%
! ATCAGTTCGATAAAAAAACA+AGG - chr5_2:65117079-65117098 Msa0782230:intron 25.0%
!!! GAAATATAAGTTGAGTTTTG+AGG + chr5_2:65117121-65117140 None:intergenic 25.0%
! TGAATGTAGGATTGAAAAAT+AGG + chr5_2:65117322-65117341 None:intergenic 25.0%
!!! ATATTGATTTGCTAAGATAC+CGG + chr5_2:65117612-65117631 None:intergenic 25.0%
!! TTTTCAATGTTGTAAAACTC+AGG + chr5_2:65118018-65118037 None:intergenic 25.0%
! TTCAACAACTTGAAGAATTA+AGG - chr5_2:65118142-65118161 Msa0782230:intron 25.0%
! TCATTGACATTTAAGGAAAT+TGG - chr5_2:65118182-65118201 Msa0782230:intron 25.0%
! TAATTGTGCTTATGGTTATT+TGG - chr5_2:65118388-65118407 Msa0782230:intron 25.0%
! TGTAACAATGTATTGAACAA+TGG - chr5_2:65118483-65118502 Msa0782230:CDS 25.0%
CTGTATGAATGAGTATAAGA+AGG + chr5_2:65113570-65113589 None:intergenic 30.0%
ACATATATTGTATACTTGGG+AGG - chr5_2:65113667-65113686 Msa0782230:three_prime_UTR 30.0%
GATTTACTTGCTTCAATCTT+AGG - chr5_2:65113751-65113770 Msa0782230:three_prime_UTR 30.0%
! TTTTTGTAATAGCCATGAGA+AGG - chr5_2:65113842-65113861 Msa0782230:CDS 30.0%
CAACAATTACTTCTTTACCA+TGG - chr5_2:65113958-65113977 Msa0782230:CDS 30.0%
AAAATGACTCAACAAATCCA+TGG + chr5_2:65113978-65113997 None:intergenic 30.0%
TGTGCAACATATCATTGAAT+TGG + chr5_2:65114317-65114336 None:intergenic 30.0%
! CAAATACAACATTTTGCAAC+AGG - chr5_2:65114545-65114564 Msa0782230:CDS 30.0%
ACTATATTCCTTCTTAGTCA+TGG - chr5_2:65114750-65114769 Msa0782230:intron 30.0%
TTGATTCTCATACTTCAACT+TGG - chr5_2:65114842-65114861 Msa0782230:intron 30.0%
TGATTCTCATACTTCAACTT+GGG - chr5_2:65114843-65114862 Msa0782230:intron 30.0%
!! GAGCATTGATATTGTATAGT+TGG + chr5_2:65114878-65114897 None:intergenic 30.0%
!! AGACTCATCTCTTGTTATTT+CGG + chr5_2:65114929-65114948 None:intergenic 30.0%
ATTAACACTAAGTGCATGTT+TGG + chr5_2:65115107-65115126 None:intergenic 30.0%
GTGTTAATTAAGACTCACAT+TGG - chr5_2:65115119-65115138 Msa0782230:CDS 30.0%
AAGCTGAAAAGGTTTAACAA+CGG - chr5_2:65115163-65115182 Msa0782230:intron 30.0%
ACATAACATAGGAATGTGTT+AGG + chr5_2:65115476-65115495 None:intergenic 30.0%
! CATATTGTGATTCGTAGTTT+TGG + chr5_2:65115538-65115557 None:intergenic 30.0%
CAAAACTACGAATCACAATA+TGG - chr5_2:65115536-65115555 Msa0782230:CDS 30.0%
TCACCTGATGTAACAATATT+CGG - chr5_2:65115641-65115660 Msa0782230:intron 30.0%
TGATGTGATTTCAACTTCTT+TGG - chr5_2:65115805-65115824 Msa0782230:CDS 30.0%
GATGTGATTTCAACTTCTTT+GGG - chr5_2:65115806-65115825 Msa0782230:CDS 30.0%
!! ATTGAAGCTTTGTTTACTGA+TGG - chr5_2:65115845-65115864 Msa0782230:intron 30.0%
! GTACTGATGAAAACATTACT+AGG - chr5_2:65116617-65116636 Msa0782230:intron 30.0%
GTTTAAAGACTATGCACTAA+CGG - chr5_2:65116653-65116672 Msa0782230:intron 30.0%
! TCTGAAGCAAAAACATATAC+AGG - chr5_2:65116808-65116827 Msa0782230:intron 30.0%
ATTAAAGCCATCTCCAATTA+TGG - chr5_2:65116831-65116850 Msa0782230:intron 30.0%
!! AAAATTTCTAGTTGCGTCTA+CGG - chr5_2:65116937-65116956 Msa0782230:intron 30.0%
ATATTACTACTTATGTGGAG+CGG + chr5_2:65117017-65117036 None:intergenic 30.0%
!!! TTTTTTCAAATCAACACCGA+CGG - chr5_2:65117153-65117172 Msa0782230:intron 30.0%
! AGGAACCTAAACTTTTATTG+CGG - chr5_2:65117203-65117222 Msa0782230:intron 30.0%
ATGTAGGATTGAAAAATAGG+TGG + chr5_2:65117319-65117338 None:intergenic 30.0%
ACAAAATAAGTGAAGAAGAG+TGG + chr5_2:65117349-65117368 None:intergenic 30.0%
!! TCAAAGATCACTCACTTTTA+AGG - chr5_2:65117756-65117775 Msa0782230:intron 30.0%
!! CAAAGATCACTCACTTTTAA+GGG - chr5_2:65117757-65117776 Msa0782230:intron 30.0%
CAGTAATTGAAGGATAATTG+AGG + chr5_2:65118041-65118060 None:intergenic 30.0%
CGATTATACACAGTAATTGA+AGG + chr5_2:65118051-65118070 None:intergenic 30.0%
TCAATTACTGTGTATAATCG+AGG - chr5_2:65118051-65118070 Msa0782230:intron 30.0%
ACCAAGTTCATTGACATTTA+AGG - chr5_2:65118175-65118194 Msa0782230:intron 30.0%
TCCTTAAATGTCAATGAACT+TGG + chr5_2:65118179-65118198 None:intergenic 30.0%
AACCTTTCAGATAATTCTAG+AGG - chr5_2:65118214-65118233 Msa0782230:CDS 30.0%
TATGTGTGTAATTGTGCTTA+TGG - chr5_2:65118380-65118399 Msa0782230:intron 30.0%
TACTTGCTTCAATCTTAGGA+AGG - chr5_2:65113755-65113774 Msa0782230:three_prime_UTR 35.0%
! TTTCTTGGACTGGAAAAAGA+TGG - chr5_2:65114113-65114132 Msa0782230:CDS 35.0%
GAATTTCTCTTGATTCTGCT+TGG - chr5_2:65114138-65114157 Msa0782230:CDS 35.0%
!! GACATGTTTGTTGTTGAAAC+AGG - chr5_2:65114418-65114437 Msa0782230:CDS 35.0%
GATTCTCATACTTCAACTTG+GGG - chr5_2:65114844-65114863 Msa0782230:intron 35.0%
AATGCTCTACCAAATACACA+AGG - chr5_2:65114891-65114910 Msa0782230:intron 35.0%
AACTAAGGTCCTTGTGTATT+TGG + chr5_2:65114903-65114922 None:intergenic 35.0%
!! TTGTTATTTCGGGACAACTA+AGG + chr5_2:65114918-65114937 None:intergenic 35.0%
!! GACTCATCTCTTGTTATTTC+GGG + chr5_2:65114928-65114947 None:intergenic 35.0%
ACGGAGAGACATAAAATGTA+AGG - chr5_2:65115182-65115201 Msa0782230:intron 35.0%
TTGCCGAATATTGTTACATC+AGG + chr5_2:65115647-65115666 None:intergenic 35.0%
GATGTAACAATATTCGGCAA+CGG - chr5_2:65115647-65115666 Msa0782230:intron 35.0%
TAGCATCCTACAAAGTATGT+TGG - chr5_2:65115708-65115727 Msa0782230:intron 35.0%
CTTTGACCAACATACTTTGT+AGG + chr5_2:65115717-65115736 None:intergenic 35.0%
! TGCTTTTGCTAAGAATGTTG+TGG - chr5_2:65115889-65115908 Msa0782230:intron 35.0%
TTGCAGCTAGTACAATTGAT+AGG - chr5_2:65115984-65116003 Msa0782230:CDS 35.0%
TGCAGCTAGTACAATTGATA+GGG - chr5_2:65115985-65116004 Msa0782230:CDS 35.0%
TTAGTAAAGGCTTACCATCA+GGG - chr5_2:65116157-65116176 Msa0782230:CDS 35.0%
TACTTACGCATCTTGAATTG+TGG + chr5_2:65116238-65116257 None:intergenic 35.0%
!!! TTATTGCAGTCGTTTTTGCA+AGG - chr5_2:65116354-65116373 Msa0782230:CDS 35.0%
ACTTGATCCTACCAAAGTAA+AGG - chr5_2:65116384-65116403 Msa0782230:CDS 35.0%
CTTGATCCTACCAAAGTAAA+GGG - chr5_2:65116385-65116404 Msa0782230:CDS 35.0%
ATCTTTCCCTTTACTTTGGT+AGG + chr5_2:65116394-65116413 None:intergenic 35.0%
GTGATCAATGATGAGAAAAG+TGG - chr5_2:65116496-65116515 Msa0782230:intron 35.0%
TAGCGAAATCTGATTGAAGA+CGG + chr5_2:65116696-65116715 None:intergenic 35.0%
AGTGCAACCATTAATACTCA+AGG - chr5_2:65116882-65116901 Msa0782230:intron 35.0%
TGTTGCCGCAATAAAAGTTT+AGG + chr5_2:65117211-65117230 None:intergenic 35.0%
GCGGCAACATTAATAATCTT+TGG - chr5_2:65117222-65117241 Msa0782230:intron 35.0%
ATTCCTTACAATCTGCAACA+AGG - chr5_2:65117485-65117504 Msa0782230:intron 35.0%
! GACTTTTCTACATATACTGC+AGG + chr5_2:65117738-65117757 None:intergenic 35.0%
ATAGCGACTCCATTTGAATA+TGG - chr5_2:65117850-65117869 Msa0782230:CDS 35.0%
ACTCCATTTGAATATGGTTC+TGG - chr5_2:65117856-65117875 Msa0782230:CDS 35.0%
TGTCCAGAACCATATTCAAA+TGG + chr5_2:65117862-65117881 None:intergenic 35.0%
CTTAGATCATAAACAAGTCC+TGG + chr5_2:65117910-65117929 None:intergenic 35.0%
CGAGTAACGTTTATAAGGTT+CGG + chr5_2:65118078-65118097 None:intergenic 35.0%
ATTTCCACAACATATGTGCT+AGG + chr5_2:65118123-65118142 None:intergenic 35.0%
!! TGCCTCTAGAATTATCTGAA+AGG + chr5_2:65118219-65118238 None:intergenic 35.0%
! CAGATAATTCTAGAGGCAAT+AGG - chr5_2:65118221-65118240 Msa0782230:CDS 35.0%
! CTCATGGTTTTCCAGTATTT+GGG - chr5_2:65118252-65118271 Msa0782230:CDS 35.0%
CAAGTCAATTTCCCAAATAC+TGG + chr5_2:65118266-65118285 None:intergenic 35.0%
CAGTATTTGGGAAATTGACT+TGG - chr5_2:65118264-65118283 Msa0782230:CDS 35.0%
TGAGCTTACAAGACTACTAT+AGG + chr5_2:65118317-65118336 None:intergenic 35.0%
TGTAAGCTCATAAATCTCTG+AGG - chr5_2:65118327-65118346 Msa0782230:intron 35.0%
TGTATTGAACAATGTTCTGC+TGG - chr5_2:65118453-65118472 Msa0782230:CDS 35.0%
GCACATGCTTACCTTTCTAA+GGG + chr5_2:65113541-65113560 None:intergenic 40.0%
AGCACATGCTTACCTTTCTA+AGG + chr5_2:65113542-65113561 None:intergenic 40.0%
AACTCAAGATCATCAAGGGA+GGG + chr5_2:65113712-65113731 None:intergenic 40.0%
TAACTCAAGATCATCAAGGG+AGG + chr5_2:65113713-65113732 None:intergenic 40.0%
GGCTAACTCAAGATCATCAA+GGG + chr5_2:65113716-65113735 None:intergenic 40.0%
TGGCTAACTCAAGATCATCA+AGG + chr5_2:65113717-65113736 None:intergenic 40.0%
TAATAGCCATGAGAAGGCAA+AGG - chr5_2:65113848-65113867 Msa0782230:CDS 40.0%
AATTGCACACTACAAGGTCA+TGG - chr5_2:65114087-65114106 Msa0782230:CDS 40.0%
ATTGCACACTACAAGGTCAT+GGG - chr5_2:65114088-65114107 Msa0782230:CDS 40.0%
TTTCTCTTGATTCTGCTTGG+TGG - chr5_2:65114141-65114160 Msa0782230:CDS 40.0%
! TTGTTGTTGAAACAGGCGTT+TGG - chr5_2:65114425-65114444 Msa0782230:CDS 40.0%
CCACTGAAACTTTCATGTTC+CGG + chr5_2:65114451-65114470 None:intergenic 40.0%
CATGAAAGTTTCAGTGGCAT+TGG - chr5_2:65114454-65114473 Msa0782230:CDS 40.0%
! AGTTTCAGTGGCATTGGATA+TGG - chr5_2:65114460-65114479 Msa0782230:CDS 40.0%
ATGGTCAAGTGCCATCAAAA+TGG - chr5_2:65114479-65114498 Msa0782230:CDS 40.0%
!! AACATCTACGGTGTTGTGTA+TGG - chr5_2:65115372-65115391 Msa0782230:intron 40.0%
!! TTGATAATGTGTGTGTGCCA+TGG + chr5_2:65115604-65115623 None:intergenic 40.0%
ACAATATTCGGCAACGGTAA+CGG - chr5_2:65115653-65115672 Msa0782230:intron 40.0%
GTGATTTCAACTTCTTTGGG+TGG - chr5_2:65115809-65115828 Msa0782230:CDS 40.0%
TTGTGGTTGTTTGTTCTGCT+GGG - chr5_2:65115906-65115925 Msa0782230:intron 40.0%
TTTGTAACACTCCTATGAGC+AGG + chr5_2:65115941-65115960 None:intergenic 40.0%
GTGTTACAAATGTAGCACCT+TGG - chr5_2:65115951-65115970 Msa0782230:CDS 40.0%
TGGTAAGCCTTTACTAAGAC+TGG + chr5_2:65116154-65116173 None:intergenic 40.0%
CTTAGTAAAGGCTTACCATC+AGG - chr5_2:65116156-65116175 Msa0782230:CDS 40.0%
!! ATTTTCTTTGATGGCCCTGA+TGG + chr5_2:65116174-65116193 None:intergenic 40.0%
GAAACAACGTCTATTGCTCA+AGG - chr5_2:65116436-65116455 Msa0782230:CDS 40.0%
GATGAAAACCCAGCCATAAT+TGG + chr5_2:65116847-65116866 None:intergenic 40.0%
! TTATGGCTGGGTTTTCATCT+AGG - chr5_2:65116848-65116867 Msa0782230:intron 40.0%
! TATGGCTGGGTTTTCATCTA+GGG - chr5_2:65116849-65116868 Msa0782230:intron 40.0%
ATTAATGGTTGCACTGCACT+AGG + chr5_2:65116877-65116896 None:intergenic 40.0%
AACTGAGATGATGTCCCAAT+CGG - chr5_2:65117055-65117074 Msa0782230:intron 40.0%
! TTATCGAACTGATGCCGATT+GGG + chr5_2:65117072-65117091 None:intergenic 40.0%
TTTATCGAACTGATGCCGAT+TGG + chr5_2:65117073-65117092 None:intergenic 40.0%
ACTTCAATTCTCTACCCTAG+TGG - chr5_2:65117293-65117312 Msa0782230:intron 40.0%
TGAAAAATAGGTGGCCACTA+GGG + chr5_2:65117310-65117329 None:intergenic 40.0%
TTGAAAAATAGGTGGCCACT+AGG + chr5_2:65117311-65117330 None:intergenic 40.0%
GAAGAGTGGACATTGAATGT+AGG + chr5_2:65117335-65117354 None:intergenic 40.0%
GTATCTGATGGTAGATTCGA+TGG + chr5_2:65117458-65117477 None:intergenic 40.0%
GTTGCAGATTGTAAGGAATG+CGG + chr5_2:65117484-65117503 None:intergenic 40.0%
GTTCCTTGTTGCAGATTGTA+AGG + chr5_2:65117491-65117510 None:intergenic 40.0%
TCAAGACACTTCATCCTAGT+TGG - chr5_2:65117552-65117571 Msa0782230:intron 40.0%
AAATCTGCCATCATGACTAC+CGG - chr5_2:65117590-65117609 Msa0782230:intron 40.0%
TAAGATACCGGTAGTCATGA+TGG + chr5_2:65117600-65117619 None:intergenic 40.0%
TATTCAGCCTAACCTTGCAA+TGG - chr5_2:65117882-65117901 Msa0782230:CDS 40.0%
CGGTACGAGTAACGTTTATA+AGG + chr5_2:65118083-65118102 None:intergenic 40.0%
AATACTGGAAAACCATGAGG+AGG + chr5_2:65118251-65118270 None:intergenic 40.0%
CCAAATACTGGAAAACCATG+AGG + chr5_2:65118254-65118273 None:intergenic 40.0%
! CCTCATGGTTTTCCAGTATT+TGG - chr5_2:65118251-65118270 Msa0782230:CDS 40.0%
!! GGGAAATTGACTTGGACAAA+TGG - chr5_2:65118272-65118291 Msa0782230:CDS 40.0%
!! CTATAGGACTAGTTACTCTG+TGG + chr5_2:65118301-65118320 None:intergenic 40.0%
ACACACTGATGCCCTTAGAA+AGG - chr5_2:65113527-65113546 Msa0782230:three_prime_UTR 45.0%
TACTTGGGAGGACATTCTCA+TGG - chr5_2:65113679-65113698 Msa0782230:three_prime_UTR 45.0%
AGATCATCAAGGGAGGGATT+TGG + chr5_2:65113706-65113725 None:intergenic 45.0%
CTGTTTCCTTTGCCTTCTCA+TGG + chr5_2:65113857-65113876 None:intergenic 45.0%
TCTTCATCTTCAAGCAGTGC+AGG + chr5_2:65113916-65113935 None:intergenic 45.0%
TGCACTGCTTGAAGATGAAG+AGG - chr5_2:65113915-65113934 Msa0782230:CDS 45.0%
ACAAGGTCATGGGACTTTCT+TGG - chr5_2:65114098-65114117 Msa0782230:CDS 45.0%
! CTTGGACTGGAAAAAGATGG+TGG - chr5_2:65114116-65114135 Msa0782230:CDS 45.0%
! TCTTGATTCTGCTTGGTGGA+AGG - chr5_2:65114145-65114164 Msa0782230:CDS 45.0%
CCGGAACATGAAAGTTTCAG+TGG - chr5_2:65114448-65114467 Msa0782230:CDS 45.0%
AAGTGCCATCAAAATGGCGT+GGG - chr5_2:65114485-65114504 Msa0782230:CDS 45.0%
CATCAAAATGGCGTGGGAAT+GGG - chr5_2:65114491-65114510 Msa0782230:CDS 45.0%
ATCAAAATGGCGTGGGAATG+GGG - chr5_2:65114492-65114511 Msa0782230:CDS 45.0%
CAATAAAGTCACGTGCTGTG+AGG + chr5_2:65115580-65115599 None:intergenic 45.0%
CTCACAGCACGTGACTTTAT+TGG - chr5_2:65115578-65115597 Msa0782230:CDS 45.0%
CACACATTATCAACAGCAGC+AGG - chr5_2:65115611-65115630 Msa0782230:intron 45.0%
TGTTGGTCAAAGACAGATGC+AGG - chr5_2:65115725-65115744 Msa0782230:intron 45.0%
GTTGTGGTTGTTTGTTCTGC+TGG - chr5_2:65115905-65115924 Msa0782230:intron 45.0%
GTTTGTTCTGCTGGGAATGA+TGG - chr5_2:65115914-65115933 Msa0782230:intron 45.0%
TCCTTTACCTGGTGCAAGTA+TGG - chr5_2:65116543-65116562 Msa0782230:intron 45.0%
TCCATACTTGCACCAGGTAA+AGG + chr5_2:65116547-65116566 None:intergenic 45.0%
TGCAAGTATGGATGCCAATG+AGG - chr5_2:65116555-65116574 Msa0782230:intron 45.0%
ATCGATATCCTCGTCCTCAT+TGG + chr5_2:65116572-65116591 None:intergenic 45.0%
AAGCCATCTCCAATTATGGC+TGG - chr5_2:65116835-65116854 Msa0782230:intron 45.0%
AGCCATCTCCAATTATGGCT+GGG - chr5_2:65116836-65116855 Msa0782230:intron 45.0%
AACCCAGCCATAATTGGAGA+TGG + chr5_2:65116841-65116860 None:intergenic 45.0%
! ATGGCTGGGTTTTCATCTAG+GGG - chr5_2:65116850-65116869 Msa0782230:intron 45.0%
TAGGTTCCTCCACATCCTTA+GGG + chr5_2:65117192-65117211 None:intergenic 45.0%
TTAGGTTCCTCCACATCCTT+AGG + chr5_2:65117193-65117212 None:intergenic 45.0%
TGCTCCTGGAGTGAACATAT+TGG - chr5_2:65117409-65117428 Msa0782230:intron 45.0%
TGATGGTAGATTCGATGGAC+TGG + chr5_2:65117453-65117472 None:intergenic 45.0%
ATGTCTTGTCCTCATGTTGC+TGG - chr5_2:65117515-65117534 Msa0782230:intron 45.0%
! TGGCAGATTTGATAGCAGCT+GGG + chr5_2:65117580-65117599 None:intergenic 45.0%
! ATGGCAGATTTGATAGCAGC+TGG + chr5_2:65117581-65117600 None:intergenic 45.0%
TTATCGAACGCGTCTCTGAT+TGG + chr5_2:65117829-65117848 None:intergenic 45.0%
ACTCGTACCGTCACAAATGT+TGG - chr5_2:65118093-65118112 Msa0782230:intron 45.0%
CTCGTACCGTCACAAATGTT+GGG - chr5_2:65118094-65118113 Msa0782230:intron 45.0%
AGGAGACCCAACATTTGTGA+CGG + chr5_2:65118103-65118122 None:intergenic 45.0%
GTCTCCTAGCACATATGTTG+TGG - chr5_2:65118116-65118135 Msa0782230:intron 45.0%
GTCATGGGACTTTCTTGGAC+TGG - chr5_2:65114103-65114122 Msa0782230:CDS 50.0%
! GCTTGGTGGAAGGCAAGATT+TGG - chr5_2:65114155-65114174 Msa0782230:CDS 50.0%
TGTTGAAACAGGCGTTTGGC+CGG - chr5_2:65114429-65114448 Msa0782230:CDS 50.0%
CAAGTGCCATCAAAATGGCG+TGG - chr5_2:65114484-65114503 Msa0782230:CDS 50.0%
!! CCATTCCCACGCCATTTTGA+TGG + chr5_2:65114493-65114512 None:intergenic 50.0%
CCATCAAAATGGCGTGGGAA+TGG - chr5_2:65114490-65114509 Msa0782230:CDS 50.0%
TCACGTGCTGTGAGGTTTGA+GGG + chr5_2:65115572-65115591 None:intergenic 50.0%
GCACGTGACTTTATTGGCCA+TGG - chr5_2:65115584-65115603 Msa0782230:CDS 50.0%
TAGGATGCTACACGTGCTCT+AGG + chr5_2:65115698-65115717 None:intergenic 50.0%
TGGTCAAAGACAGATGCAGG+TGG - chr5_2:65115728-65115747 Msa0782230:intron 50.0%
!! GGAATGATGGACCTGCTCAT+AGG - chr5_2:65115927-65115946 Msa0782230:intron 50.0%
GCTGCAACAGTGAAAGACCA+AGG + chr5_2:65115971-65115990 None:intergenic 50.0%
! CAGGGTGCCAGTCTTAGTAA+AGG - chr5_2:65116144-65116163 Msa0782230:CDS 50.0%
GCTGAACCTCATCCTTTACC+TGG - chr5_2:65116532-65116551 Msa0782230:intron 50.0%
CTTGCACCAGGTAAAGGATG+AGG + chr5_2:65116541-65116560 None:intergenic 50.0%
TTGGCATCCATACTTGCACC+AGG + chr5_2:65116553-65116572 None:intergenic 50.0%
TATGGATGCCAATGAGGACG+AGG - chr5_2:65116561-65116580 Msa0782230:intron 50.0%
AGGATATCGATGAGCGTGAG+TGG - chr5_2:65116581-65116600 Msa0782230:intron 50.0%
ATCGATGAGCGTGAGTGGTT+TGG - chr5_2:65116586-65116605 Msa0782230:intron 50.0%
! GAGCGTGAGTGGTTTGGAAA+AGG - chr5_2:65116592-65116611 Msa0782230:intron 50.0%
! CGTGAGTGGTTTGGAAAAGG+TGG - chr5_2:65116595-65116614 Msa0782230:intron 50.0%
! TTCTAGTTGCGTCTACGGTG+AGG - chr5_2:65116942-65116961 Msa0782230:intron 50.0%
ACTCCAGGAGCAGTTATGTC+AGG + chr5_2:65117401-65117420 None:intergenic 50.0%
GCAGCCAATATGTTCACTCC+AGG + chr5_2:65117416-65117435 None:intergenic 50.0%
!! TGGTAGATTCGATGGACTGG+TGG + chr5_2:65117450-65117469 None:intergenic 50.0%
CCTGGATCCATTGCAAGGTT+AGG + chr5_2:65117892-65117911 None:intergenic 50.0%
CCTAACCTTGCAATGGATCC+AGG - chr5_2:65117889-65117908 Msa0782230:CDS 50.0%
CAAGTCCTGGATCCATTGCA+AGG + chr5_2:65117897-65117916 None:intergenic 50.0%
GCAATAGGTATGCCTCCTCA+TGG - chr5_2:65118236-65118255 Msa0782230:CDS 50.0%
GTCACGTGCTGTGAGGTTTG+AGG + chr5_2:65115573-65115592 None:intergenic 55.0%
! AACGGTAACGGCACAGCGAA+AGG - chr5_2:65115665-65115684 Msa0782230:intron 55.0%
!! GGCTTTGAAGCTGCTCTTGC+AGG - chr5_2:65116457-65116476 Msa0782230:CDS 55.0%
CTGCTCTTGCAGGAGCTGTA+GGG - chr5_2:65116467-65116486 Msa0782230:CDS 55.0%
GGATCACTGTCTCAGCCCTA+AGG - chr5_2:65117174-65117193 Msa0782230:intron 55.0%
CTGTCTCAGCCCTAAGGATG+TGG - chr5_2:65117180-65117199 Msa0782230:intron 55.0%
TCTCAGCCCTAAGGATGTGG+AGG - chr5_2:65117183-65117202 Msa0782230:intron 55.0%
CAGCCTGACATAACTGCTCC+TGG - chr5_2:65117395-65117414 Msa0782230:intron 55.0%
GGAATGCGGCGTGTATCTGA+TGG + chr5_2:65117470-65117489 None:intergenic 55.0%
CCAGCAATGCCAGCAACATG+AGG + chr5_2:65117527-65117546 None:intergenic 55.0%
CCTCATGTTGCTGGCATTGC+TGG - chr5_2:65117524-65117543 Msa0782230:intron 55.0%
ATAGCAGCTGGGCTCCAACT+AGG + chr5_2:65117569-65117588 None:intergenic 55.0%
! GGTAACGGCACAGCGAAAGG+TGG - chr5_2:65115668-65115687 Msa0782230:intron 60.0%
GCTGCTCTTGCAGGAGCTGT+AGG - chr5_2:65116466-65116485 Msa0782230:CDS 60.0%
GGGCTGAGACAGTGATCCGT+CGG + chr5_2:65117172-65117191 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 65113465 65118520 65113465 ID=Msa0782230;Name=Msa0782230
chr5_2 mRNA 65113465 65118520 65113465 ID=Msa0782230-mRNA-1;Parent=Msa0782230;Name=Msa0782230-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.37|0.33|1|1|1|9|332|626
chr5_2 exon 65113465 65114185 65113465 ID=Msa0782230-mRNA-1:exon:19533;Parent=Msa0782230-mRNA-1
chr5_2 exon 65114374 65114587 65114374 ID=Msa0782230-mRNA-1:exon:19532;Parent=Msa0782230-mRNA-1
chr5_2 exon 65115103 65115155 65115103 ID=Msa0782230-mRNA-1:exon:19531;Parent=Msa0782230-mRNA-1
chr5_2 exon 65115426 65115622 65115426 ID=Msa0782230-mRNA-1:exon:19530;Parent=Msa0782230-mRNA-1
chr5_2 exon 65115735 65115838 65115735 ID=Msa0782230-mRNA-1:exon:19529;Parent=Msa0782230-mRNA-1
chr5_2 exon 65115934 65116514 65115934 ID=Msa0782230-mRNA-1:exon:19528;Parent=Msa0782230-mRNA-1
chr5_2 exon 65117776 65117924 65117776 ID=Msa0782230-mRNA-1:exon:19527;Parent=Msa0782230-mRNA-1
chr5_2 exon 65118209 65118318 65118209 ID=Msa0782230-mRNA-1:exon:19526;Parent=Msa0782230-mRNA-1
chr5_2 exon 65118437 65118520 65118437 ID=Msa0782230-mRNA-1:exon:19525;Parent=Msa0782230-mRNA-1
chr5_2 CDS 65118437 65118520 65118437 ID=Msa0782230-mRNA-1:cds;Parent=Msa0782230-mRNA-1
chr5_2 CDS 65118209 65118318 65118209 ID=Msa0782230-mRNA-1:cds;Parent=Msa0782230-mRNA-1
chr5_2 CDS 65117776 65117924 65117776 ID=Msa0782230-mRNA-1:cds;Parent=Msa0782230-mRNA-1
chr5_2 CDS 65115934 65116514 65115934 ID=Msa0782230-mRNA-1:cds;Parent=Msa0782230-mRNA-1
chr5_2 CDS 65115735 65115838 65115735 ID=Msa0782230-mRNA-1:cds;Parent=Msa0782230-mRNA-1
chr5_2 CDS 65115426 65115622 65115426 ID=Msa0782230-mRNA-1:cds;Parent=Msa0782230-mRNA-1
chr5_2 CDS 65115103 65115155 65115103 ID=Msa0782230-mRNA-1:cds;Parent=Msa0782230-mRNA-1
chr5_2 CDS 65114374 65114587 65114374 ID=Msa0782230-mRNA-1:cds;Parent=Msa0782230-mRNA-1
chr5_2 CDS 65113797 65114185 65113797 ID=Msa0782230-mRNA-1:cds;Parent=Msa0782230-mRNA-1
chr5_2 three_prime_UTR 65113465 65113796 65113465 ID=Msa0782230-mRNA-1:three_prime_utr;Parent=Msa0782230-mRNA-1
Gene Sequence

>Msa0782230

ATGTCATATCCTATTACCAAACTTTTTCTATCATCATTCATTCTTTGCAGTTTCTTGCTAGAACACACTGATGCCCTTAGAAAGACATATATTGTATACTTGGGAGGACATTCTCATGGTCCAAATCCCTCCCTTGATGATCTTGAGTTAGCCACAAATTCACATTATGATTTACTTGCTTCAATCTTAGGAAGTTCTGTTTTCTTGAGCAAAGAATATAAATTGCACACTACAAGGTCATGGGACTTTCTTGGACTGGAAAAAGATGGTGGAATTTCTCTTGATTCTGCTTGGTGGAAGGCAAGATTTGGTGAAGATTCAATCATTGCTAATTTAGATTCAGTACCTAACACATTCCTATGTTATGTGACAAACTATAGAAAACTAATTGGAGCAAGAATATTCAGCCAAAACTACGAATCACAATATGGAAAACTCAATCCCTCAAACCTCACAGCACGTGACTTTATTGGCCATGGCACACACACATTATCAACAGCAGCAGGTAACTTTTCACCTGATGTAACAATATTCGGCAACGGTAACGGCACAGCGAAAGGTGGTTCTCCTAGAGCACGTGTAGCATCCTACAAAGTATGTTGGTCAAAGACAGATGCAGGTGGATGTCATGAAGCTGATATTCTAGCAGCATTTGATCAAGCTATATATGATGGTGTTGATGTGATTTCAACTTCTTTGGGTGGTTCTAGTCCATATATTGAAGCTTTGTTTACTGATGGAATTTCAATTGGGTCATTTCATGCTTTTGCTAAGAATGTTGTGGTTGTTTGTTCTGCTGGGAATGATGGACCTGCTCATAGGAGTGTTACAAATGTAGCACCTTGGTCTTTCACTGTTGCAGCTAGTACAATTGATAGGGAATTTGTTAGTCATATTTCTATTGGTAACAAAAATTACATAAAGGGTGCCAGTCTTAGTAAAGGCTTACCATCAGGGCCATCAAAGAAAATATATCAAATGATTCATTCTATTGATGCTAGACTTCTTAATGCCACAATTCAAGATGCTCGTTTTTGCAAGGCTAAAACACTTGATCCTACCAAAGTAAAGGGAAAGATATTAGTTTGTACTCGACTTGACGAAACAACGTCTATTGCTCAAGGCTTTGAAGCTGCTCTTGCAGGAGCTGTAGGGATTTTTGTGATCAATGATGAGAAAAGTGGAAGTTTACTTCTAGCTGAACCTCATCCTTTACCTGGTGCAAGATTAAAGCCATCTCCAATTATGGCTGGGTTTTCATCTAGGGGTCCTAGTGCACCTGACATAACTGCTCCTGGAGTGAACATATTGGCTGCTTATTCACTAGCCACCAGTCCATCGAATCTACCATCAGATACACGCCGCATTCCTTACAATCTGCAACAAGGAACTTCAATGTCTTGTCCTCATGTTGCTGGCATTGCTGGTCTTCTCAAGACACTTCATCCTAGTTGGAGCCCAGCTGCTATCAAATCTGCCATCATGACTACCGCTACAACACTAGATAACAACAATCAACCAATCAGAGACGCGTTCGATAAGATAGCGACTCCATTTGAATATGGTTCTGGACATATTCAGCCTAACCTTGCAATGGATCCAGGACTTGTTTATGATCTAAGCACAAATGATTACTTGAACTTCATTTGTGTTTTTGGTCACAGTCACAATTTATTAAAGTTCTTTAATTACAACTCTTACATTTGTCCTGAGTTTTACAACATTGAAAACCTCAATTATCCTTCAATTACTGTGTATAATCGAGGACCGAACCTTATAAACGTTACTCGTACCGTCACAAATGTTGGGTCTCCTAGCACATATGTTGTGGAAATTCAACAACTTGAAGAATTAAGGTTCATGTTCAACCAAGTTCATTGA
Protein sequence

>Msa0782230

MSYPITKLFLSSFILCSFLLEHTDALRKTYIVYLGGHSHGPNPSLDDLELATNSHYDLLASILGSSVFLSKEYKLHTTRSWDFLGLEKDGGISLDSAWWKARFGEDSIIANLDSVPNTFLCYVTNYRKLIGARIFSQNYESQYGKLNPSNLTARDFIGHGTHTLSTAAGNFSPDVTIFGNGNGTAKGGSPRARVASYKVCWSKTDAGGCHEADILAAFDQAIYDGVDVISTSLGGSSPYIEALFTDGISIGSFHAFAKNVVVVCSAGNDGPAHRSVTNVAPWSFTVAASTIDREFVSHISIGNKNYIKGASLSKGLPSGPSKKIYQMIHSIDARLLNATIQDARFCKAKTLDPTKVKGKILVCTRLDETTSIAQGFEAALAGAVGIFVINDEKSGSLLLAEPHPLPGARLKPSPIMAGFSSRGPSAPDITAPGVNILAAYSLATSPSNLPSDTRRIPYNLQQGTSMSCPHVAGIAGLLKTLHPSWSPAAIKSAIMTTATTLDNNNQPIRDAFDKIATPFEYGSGHIQPNLAMDPGLVYDLSTNDYLNFICVFGHSHNLLKFFNYNSYICPEFYNIENLNYPSITVYNRGPNLINVTRTVTNVGSPSTYVVEIQQLEELRFMFNQVH*