Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1446960 | A0A072VRN1 | 76.027 | 146 | 18 | 3 | 16 | 146 | 1 | 144 | 1.13e-68 | 219 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0033340 | Msa1446960 | 0.803793 | 2.942672e-49 | -8.615850e-47 |
| Msa0689010 | Msa1446960 | 0.804432 | 2.166032e-49 | -8.615850e-47 |
| Msa1336490 | Msa1446960 | 0.805014 | 1.638004e-49 | -8.615850e-47 |
| Msa0270270 | Msa1446960 | 0.801240 | 9.886543e-49 | -8.615850e-47 |
| Msa1154160 | Msa1446960 | 0.802676 | 5.010429e-49 | -8.615850e-47 |
| Msa0870620 | Msa1446960 | 0.809328 | 1.997820e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1446960 | MtrunA17_Chr1g0162721 | 76.027 | 146 | 18 | 3 | 16 | 146 | 1 | 144 | 2.17e-72 | 219 |
| Msa1446960 | MtrunA17_Chr4g0065261 | 35.870 | 92 | 39 | 1 | 45 | 116 | 18 | 109 | 6.58e-12 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 60 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAACTATGTGGGGTTTAT+TGG | 0.126290 | tig0031544:+4803 | None:intergenic |
| TCTGGTCTGGCTCAGAATTT+AGG | 0.161997 | tig0031544:-3824 | Msa1446960:three_prime_UTR |
| GAAATGGTACACAGAAATTT+TGG | 0.193208 | tig0031544:-4505 | Msa1446960:CDS |
| GATTTATGCTTCTTAGTTAA+AGG | 0.201185 | tig0031544:+4025 | None:intergenic |
| TGCAAGTGGATGATTATAAA+AGG | 0.250430 | tig0031544:+5026 | None:intergenic |
| TCCCCAGTCATTAAACTTAC+AGG | 0.268465 | tig0031544:+4439 | None:intergenic |
| TAGCAAATAAGTTGAAATCT+TGG | 0.305874 | tig0031544:+4473 | None:intergenic |
| GACTGGGGAATCAAGAGAAT+TGG | 0.364749 | tig0031544:-4425 | Msa1446960:CDS |
| CACAAGTTTCTCGATCTTGA+TGG | 0.368390 | tig0031544:-5394 | Msa1446960:CDS |
| CTGGTCTGGCTCAGAATTTA+GGG | 0.370245 | tig0031544:-3823 | Msa1446960:three_prime_UTR |
| CAAACAGGCTTATTACAATC+CGG | 0.402271 | tig0031544:-5063 | Msa1446960:intron |
| TCAGTACATCTTGCAAAATC+AGG | 0.425666 | tig0031544:-4983 | Msa1446960:intron |
| AAGATCAAAGATAAAGAAAC+AGG | 0.437513 | tig0031544:-2586 | Msa1446960:intron |
| AAGGAAGAATCCACTCCGTT+TGG | 0.441874 | tig0031544:-5369 | Msa1446960:CDS |
| ACAAGTTTCTCGATCTTGAT+GGG | 0.458271 | tig0031544:-5393 | Msa1446960:CDS |
| TTCCTTGTAGAAAATCCATC+TGG | 0.463105 | tig0031544:-3842 | Msa1446960:intron |
| TAAGCTTTCTGAGGAATGTC+TGG | 0.463695 | tig0031544:-1470 | Msa1446960:three_prime_UTR |
| GCAAGTGGATGATTATAAAA+GGG | 0.464969 | tig0031544:+5027 | None:intergenic |
| GGATGATTATAAAAGGGGCT+TGG | 0.468279 | tig0031544:+5033 | None:intergenic |
| TGGAAGACCTTACAATTTCA+CGG | 0.479597 | tig0031544:-5349 | Msa1446960:CDS |
| TGTAGAAAATCCATCTGGTC+TGG | 0.486514 | tig0031544:-3837 | Msa1446960:intron |
| TAATAAGATAGACACTCTTA+AGG | 0.488014 | tig0031544:-1524 | Msa1446960:three_prime_UTR |
| GCTTAGCAAGCGTTTGTGCT+AGG | 0.489007 | tig0031544:+1488 | None:intergenic |
| GTTAAAATGATGGACCTCAA+TGG | 0.494777 | tig0031544:+1426 | None:intergenic |
| TGAGGCACCGTGAAATTGTA+AGG | 0.513205 | tig0031544:+5342 | None:intergenic |
| GGTTTATTGGACAGCCTCAC+GGG | 0.515395 | tig0031544:+4816 | None:intergenic |
| AAACAGGCTTATTACAATCC+GGG | 0.516783 | tig0031544:-5062 | Msa1446960:intron |
| CAACCTGTAAGTTTAATGAC+TGG | 0.518291 | tig0031544:-4442 | Msa1446960:CDS |
| AACCTGTAAGTTTAATGACT+GGG | 0.521729 | tig0031544:-4441 | Msa1446960:CDS |
| GGGTTTATTGGACAGCCTCA+CGG | 0.528698 | tig0031544:+4815 | None:intergenic |
| CTTCAACGTGATGCTCTACA+TGG | 0.529457 | tig0031544:-4840 | Msa1446960:CDS |
| ATATTGATTCAGGAAGCTAC+AGG | 0.541673 | tig0031544:-5420 | Msa1446960:intron |
| ATGTACTGATGATACAAGTA+AGG | 0.542138 | tig0031544:+4997 | None:intergenic |
| AAATTCTGAGCCAGACCAGA+TGG | 0.553977 | tig0031544:+3827 | None:intergenic |
| GAACAAATTGTACCTCATTG+AGG | 0.556643 | tig0031544:+4364 | None:intergenic |
| GGCTCACCTCAACAACTATG+TGG | 0.564253 | tig0031544:+4793 | None:intergenic |
| TGGAAGCAAGAGATCACCAG+AGG | 0.574208 | tig0031544:-4266 | Msa1446960:three_prime_UTR |
| TCTAACATGATTACTGCGGA+TGG | 0.576063 | tig0031544:-4004 | Msa1446960:intron |
| GCTCACCTCAACAACTATGT+GGG | 0.580762 | tig0031544:+4794 | None:intergenic |
| AAAGAGGGGAGTTAAAATGA+TGG | 0.581509 | tig0031544:+1416 | None:intergenic |
| AAATTGTAAGGTCTTCCAAA+CGG | 0.581928 | tig0031544:+5354 | None:intergenic |
| AAGTAAGGAGCAGCTGCAAG+TGG | 0.592524 | tig0031544:+5012 | None:intergenic |
| TTTCTCGATCTTGATGGGGA+AGG | 0.594200 | tig0031544:-5388 | Msa1446960:CDS |
| TAAACCCCACATAGTTGTTG+AGG | 0.602835 | tig0031544:-4799 | Msa1446960:intron |
| CAAGTGGATGATTATAAAAG+GGG | 0.603697 | tig0031544:+5028 | None:intergenic |
| AACGCTTGCTAAGCTTTCTG+AGG | 0.605311 | tig0031544:-1479 | Msa1446960:three_prime_UTR |
| CAAGTTTCTCGATCTTGATG+GGG | 0.608143 | tig0031544:-5392 | Msa1446960:CDS |
| CAATGAAAATGATTCCATTG+AGG | 0.612331 | tig0031544:-1440 | Msa1446960:three_prime_UTR |
| GGAAGCAAGAGATCACCAGA+GGG | 0.616601 | tig0031544:-4265 | Msa1446960:three_prime_UTR |
| AACATCAACGTCAACAACGT+CGG | 0.620687 | tig0031544:+3778 | None:intergenic |
| AAAGGGGCTTGGAGTAGACC+CGG | 0.620703 | tig0031544:+5044 | None:intergenic |
| GAATTTAGGGACAGTCGTCA+AGG | 0.625189 | tig0031544:-3810 | Msa1446960:three_prime_UTR |
| ACCTGTAAGTTTAATGACTG+GGG | 0.644193 | tig0031544:-4440 | Msa1446960:CDS |
| CTCACCTCAACAACTATGTG+GGG | 0.660296 | tig0031544:+4795 | None:intergenic |
| GATTTACTGACATCATCTTG+AGG | 0.660566 | tig0031544:+5324 | None:intergenic |
| TGTGTGCGCAGTGCAGCAAG+TGG | 0.664216 | tig0031544:-4286 | Msa1446960:intron |
| GTAAGGTCTTCCAAACGGAG+TGG | 0.675114 | tig0031544:+5359 | None:intergenic |
| TAAATCTAACATGATTACTG+CGG | 0.677606 | tig0031544:-4008 | Msa1446960:three_prime_UTR |
| ATGCTCTACATGGTCCCGTG+AGG | 0.706895 | tig0031544:-4830 | Msa1446960:CDS |
| ACAGGGATGGAACCTCAATG+AGG | 0.714168 | tig0031544:-4376 | Msa1446960:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTTTCATATATATATG+TGG | - | tig0031544:3673-3692 | Msa1446960:intron | 10.0% |
| !! | TTTATTATAAGATAATCAAA+AGG | + | tig0031544:3917-3936 | None:intergenic | 10.0% |
| !! | TATTAAATAAAATTAGAGTA+CGG | + | tig0031544:5524-5543 | None:intergenic | 10.0% |
| !! | TTTAAAAATTCAGTTTCAAT+TGG | - | tig0031544:1827-1846 | Msa1446960:intron | 15.0% |
| !!! | GTATGATTATGATATTTTTT+AGG | - | tig0031544:1851-1870 | Msa1446960:intron | 15.0% |
| !! | TAATTGAAATATTGAATACA+CGG | - | tig0031544:1898-1917 | Msa1446960:intron | 15.0% |
| !!! | ATTGAAGGAAATTTTTTATT+TGG | - | tig0031544:2264-2283 | Msa1446960:intron | 15.0% |
| !!! | TTCATAATTGTACATTATTT+TGG | - | tig0031544:2417-2436 | Msa1446960:intron | 15.0% |
| !!! | TCTTATTTTAAATTTCAAAC+AGG | - | tig0031544:2801-2820 | Msa1446960:intron | 15.0% |
| !!! | TGAAATTTTCATATTTCTTT+AGG | - | tig0031544:3203-3222 | Msa1446960:intron | 15.0% |
| !!! | GAAATTTTCATATTTCTTTA+GGG | - | tig0031544:3204-3223 | Msa1446960:intron | 15.0% |
| !!! | ATAATTTTTTATTCAGACTT+GGG | + | tig0031544:3574-3593 | None:intergenic | 15.0% |
| !! | TTAAAATTATTCTTTAGTAC+AGG | - | tig0031544:3774-3793 | Msa1446960:three_prime_UTR | 15.0% |
| !! | ATTTAATAAAATAGAAGTGA+TGG | - | tig0031544:4613-4632 | Msa1446960:intron | 15.0% |
| !!! | ATATAATGGAAGATAATATT+TGG | + | tig0031544:6156-6175 | None:intergenic | 15.0% |
| !!! | TTTTATAAATTATGTAATCC+AGG | + | tig0031544:6254-6273 | None:intergenic | 15.0% |
| !! | TCAATAATAGTAAAGCAAAT+AGG | + | tig0031544:1643-1662 | None:intergenic | 20.0% |
| !!! | ACTATTATTGATTCATTGAT+AGG | - | tig0031544:1652-1671 | Msa1446960:intron | 20.0% |
| !!! | ACAAATAATTGTTTTCGATA+GGG | + | tig0031544:1693-1712 | None:intergenic | 20.0% |
| !!! | TTGGATTTTTTACAAAATTG+AGG | - | tig0031544:1944-1963 | Msa1446960:intron | 20.0% |
| !!! | TGGATTTTTTACAAAATTGA+GGG | - | tig0031544:1945-1964 | Msa1446960:intron | 20.0% |
| !!! | GGAAATTTTTTATTTGGTAT+TGG | - | tig0031544:2270-2289 | Msa1446960:intron | 20.0% |
| !!! | TTAAAAGCAAATATTGATTC+AGG | - | tig0031544:2449-2468 | Msa1446960:intron | 20.0% |
| !! | ATATATCTATTGAAAGGTTT+AGG | + | tig0031544:3110-3129 | None:intergenic | 20.0% |
| !! | CAATGAATATATCTATTGAA+AGG | + | tig0031544:3116-3135 | None:intergenic | 20.0% |
| !!! | ATATGAATGTTTATGCATTT+TGG | - | tig0031544:3326-3345 | Msa1446960:intron | 20.0% |
| !!! | CATAATTTTTTATTCAGACT+TGG | + | tig0031544:3575-3594 | None:intergenic | 20.0% |
| !! | AAGAAATGAGTAGTTTATTA+AGG | - | tig0031544:3749-3768 | Msa1446960:intron | 20.0% |
| !!! | ATGTTTGAAAAGTTTTTTTG+TGG | - | tig0031544:4174-4193 | Msa1446960:intron | 20.0% |
| !! | GTAACATAGATTTAGAAAAA+TGG | - | tig0031544:4724-4743 | Msa1446960:intron | 20.0% |
| !!! | GATCATACAGATATTTTTAT+AGG | + | tig0031544:4928-4947 | None:intergenic | 20.0% |
| !!! | CAATATTTTCTGTAATTATG+AGG | + | tig0031544:5381-5400 | None:intergenic | 20.0% |
| !! | AATGTATATAAATTCGACAA+TGG | - | tig0031544:5402-5421 | Msa1446960:CDS | 20.0% |
| !! | ATGTATATAAATTCGACAAT+GGG | - | tig0031544:5403-5422 | Msa1446960:CDS | 20.0% |
| !! | AAAATGTAGAAAGAAAATGA+TGG | - | tig0031544:5442-5461 | Msa1446960:intron | 20.0% |
| !! | AAAATGTCAAGTAGAAAAAT+AGG | + | tig0031544:5623-5642 | None:intergenic | 20.0% |
| !! | TGTTATGTGCTTTAATAAAT+AGG | + | tig0031544:5751-5770 | None:intergenic | 20.0% |
| !! | TACATGATTATGATTATACA+TGG | - | tig0031544:6016-6035 | Msa1446960:intron | 20.0% |
| !! | TATTATCTTCCATTATATTG+TGG | - | tig0031544:6158-6177 | Msa1446960:intron | 20.0% |
| !! | GACAAATAATTGTTTTCGAT+AGG | + | tig0031544:1694-1713 | None:intergenic | 25.0% |
| !!! | ACCTACATTGTGTTTTTAAT+TGG | - | tig0031544:1925-1944 | Msa1446960:intron | 25.0% |
| ! | TCCAATTAAAAACACAATGT+AGG | + | tig0031544:1929-1948 | None:intergenic | 25.0% |
| ! | CTGTGTATATATTCTCTTTA+TGG | - | tig0031544:2324-2343 | Msa1446960:intron | 25.0% |
| ! | GTATATATTCTCTTTATGGT+TGG | - | tig0031544:2328-2347 | Msa1446960:intron | 25.0% |
| ! | ACATAACGTCAAAGAATATT+TGG | + | tig0031544:2398-2417 | None:intergenic | 25.0% |
| ! | ATACATATTACTGCTTTGTA+CGG | - | tig0031544:2926-2945 | Msa1446960:intron | 25.0% |
| !! | TGTCTATGAAATTCATTTTC+TGG | - | tig0031544:3165-3184 | Msa1446960:intron | 25.0% |
| !!! | ATTTTCATATTTCTTTAGGG+TGG | - | tig0031544:3207-3226 | Msa1446960:intron | 25.0% |
| !!! | TTTTCATATTTCTTTAGGGT+GGG | - | tig0031544:3208-3227 | Msa1446960:intron | 25.0% |
| ! | TAAATCATTCCACTAGTAAT+TGG | + | tig0031544:3244-3263 | None:intergenic | 25.0% |
| ! | AACTCATACACAATTCATTA+TGG | + | tig0031544:3295-3314 | None:intergenic | 25.0% |
| !!! | AGTTGAAATCTTGGTTTTTT+TGG | + | tig0031544:3400-3419 | None:intergenic | 25.0% |
| !! | TAGCAAATAAGTTGAAATCT+TGG | + | tig0031544:3409-3428 | None:intergenic | 25.0% |
| !! | TACAATTTGTTCTTGTTCTT+CGG | - | tig0031544:3526-3545 | Msa1446960:intron | 25.0% |
| ! | GATTTATGCTTCTTAGTTAA+AGG | + | tig0031544:3857-3876 | None:intergenic | 25.0% |
| ! | TAAATCTAACATGATTACTG+CGG | - | tig0031544:3871-3890 | Msa1446960:intron | 25.0% |
| ! | TCTGTAATTTGAATTTCAGA+AGG | - | tig0031544:3956-3975 | Msa1446960:intron | 25.0% |
| ! | TGATGCTCAACTTAAAAATA+TGG | - | tig0031544:4123-4142 | Msa1446960:intron | 25.0% |
| !!! | TCAGTTTTTAGTAAGATAAC+TGG | - | tig0031544:4219-4238 | Msa1446960:intron | 25.0% |
| ! | TAATATGTCCTTATAAAGCT+AGG | + | tig0031544:4487-4506 | None:intergenic | 25.0% |
| ! | ACATAGATTTAGAAAAATGG+AGG | - | tig0031544:4727-4746 | Msa1446960:intron | 25.0% |
| !! | CTAGATTTGCTTAAATTTGT+TGG | - | tig0031544:4875-4894 | Msa1446960:intron | 25.0% |
| !!! | ACAGATATTTTTATAGGACT+AGG | + | tig0031544:4922-4941 | None:intergenic | 25.0% |
| ! | TTCTATAACTATTGCCAATT+TGG | + | tig0031544:4963-4982 | None:intergenic | 25.0% |
| ! | TAGAATGCTAGATTGAAAAA+TGG | + | tig0031544:5095-5114 | None:intergenic | 25.0% |
| !! | CATTCTAGCTAAATATGTAT+GGG | - | tig0031544:5108-5127 | Msa1446960:intron | 25.0% |
| !! | ATTCTAGCTAAATATGTATG+GGG | - | tig0031544:5109-5128 | Msa1446960:intron | 25.0% |
| ! | AAGTTTGATTCATAACTATC+TGG | - | tig0031544:5170-5189 | Msa1446960:intron | 25.0% |
| ! | AAAGAAAAAGATTGTCAAAC+AGG | - | tig0031544:5259-5278 | Msa1446960:intron | 25.0% |
| ! | AAGATCAAAGATAAAGAAAC+AGG | - | tig0031544:5293-5312 | Msa1446960:intron | 25.0% |
| ! | ATGAGGATAACTATGTATAA+CGG | + | tig0031544:5364-5383 | None:intergenic | 25.0% |
| !! | GGAGTTGAAAAAAACTTTTT+GGG | + | tig0031544:5503-5522 | None:intergenic | 25.0% |
| ! | TATGTGCTTTAATAAATAGG+TGG | + | tig0031544:5748-5767 | None:intergenic | 25.0% |
| ! | ACAATCATGTTCCAAATAAA+GGG | + | tig0031544:5992-6011 | None:intergenic | 25.0% |
| ! | TACAATCATGTTCCAAATAA+AGG | + | tig0031544:5993-6012 | None:intergenic | 25.0% |
| !! | TTTATTTGGAACATGATTGT+AGG | - | tig0031544:5992-6011 | Msa1446960:intron | 25.0% |
| !! | TTATTTGGAACATGATTGTA+GGG | - | tig0031544:5993-6012 | Msa1446960:intron | 25.0% |
| ! | TGATTATGATTATACATGGT+AGG | - | tig0031544:6020-6039 | Msa1446960:intron | 25.0% |
| ! | GATTATGATTATACATGGTA+GGG | - | tig0031544:6021-6040 | Msa1446960:intron | 25.0% |
| !! | TATTGTTGTTGTATGATCAT+AGG | - | tig0031544:6111-6130 | Msa1446960:intron | 25.0% |
| ! | AAGATAATATTTGGCTGTTT+GGG | + | tig0031544:6147-6166 | None:intergenic | 25.0% |
| ! | TTTCAACTTCCACAATATAA+TGG | + | tig0031544:6170-6189 | None:intergenic | 25.0% |
| ! | TATAAATTATGTAATCCAGG+AGG | + | tig0031544:6251-6270 | None:intergenic | 25.0% |
| ! | TAATAAGATAGACACTCTTA+AGG | - | tig0031544:6355-6374 | Msa1446960:intron | 25.0% |
| AAACAGTGTTTGTGCTTTAT+CGG | - | tig0031544:1477-1496 | Msa1446960:three_prime_UTR | 30.0% | |
| !! | TTAGGTTTTCTTGTTGATAG+TGG | - | tig0031544:1869-1888 | Msa1446960:intron | 30.0% |
| ATTGAGGGATTTGTAATTGT+TGG | - | tig0031544:1960-1979 | Msa1446960:intron | 30.0% | |
| ! | TAATTGTTGGAGTCTAGTTT+AGG | - | tig0031544:1973-1992 | Msa1446960:intron | 30.0% |
| ACAAGAAAAGGAAAGAAAAG+TGG | + | tig0031544:2086-2105 | None:intergenic | 30.0% | |
| CTTGCTTGATTAACAAGAAA+AGG | + | tig0031544:2098-2117 | None:intergenic | 30.0% | |
| CTTGTTAATCAAGCAAGAAA+AGG | - | tig0031544:2101-2120 | Msa1446960:intron | 30.0% | |
| ! | ATCGCTATTTAACTTATCAC+AGG | + | tig0031544:2158-2177 | None:intergenic | 30.0% |
| !! | GGTAGTTTGTTCAAATTCTA+TGG | + | tig0031544:2204-2223 | None:intergenic | 30.0% |
| ACTGGTCAGTATTAAATTGA+AGG | - | tig0031544:2249-2268 | Msa1446960:intron | 30.0% | |
| AAATTGTAAGGTCTTCCAAA+CGG | + | tig0031544:2528-2547 | None:intergenic | 30.0% | |
| GATGTCAGTAAATCATGTTA+TGG | - | tig0031544:2564-2583 | Msa1446960:intron | 30.0% | |
| CAAGTGGATGATTATAAAAG+GGG | + | tig0031544:2854-2873 | None:intergenic | 30.0% | |
| GCAAGTGGATGATTATAAAA+GGG | + | tig0031544:2855-2874 | None:intergenic | 30.0% | |
| TGCAAGTGGATGATTATAAA+AGG | + | tig0031544:2856-2875 | None:intergenic | 30.0% | |
| ! | ATGTACTGATGATACAAGTA+AGG | + | tig0031544:2885-2904 | None:intergenic | 30.0% |
| !! | CTTTCACATTCTTTGTTGTT+TGG | - | tig0031544:2996-3015 | Msa1446960:intron | 30.0% |
| !! | TTTCATATTTCTTTAGGGTG+GGG | - | tig0031544:3209-3228 | Msa1446960:intron | 30.0% |
| !! | AATGTTTATGCATTTTGGTC+AGG | - | tig0031544:3331-3350 | Msa1446960:intron | 30.0% |
| ! | GAAATGGTACACAGAAATTT+TGG | - | tig0031544:3374-3393 | Msa1446960:intron | 30.0% |
| AACCTGTAAGTTTAATGACT+GGG | - | tig0031544:3438-3457 | Msa1446960:intron | 30.0% | |
| ATTCTTTAGTACAGGTCATA+TGG | - | tig0031544:3782-3801 | Msa1446960:three_prime_UTR | 30.0% | |
| CAATCATTCACACATGTTAT+AGG | - | tig0031544:4303-4322 | Msa1446960:intron | 30.0% | |
| AATGGCAGTTCATTCAAATT+CGG | + | tig0031544:4369-4388 | None:intergenic | 30.0% | |
| CGATTGAAAACACTAGTTAT+AGG | - | tig0031544:4401-4420 | Msa1446960:CDS | 30.0% | |
| TTATAGGCACTCTTTGATAT+TGG | - | tig0031544:4417-4436 | Msa1446960:CDS | 30.0% | |
| GACATATTAAGCACTAATGT+AGG | - | tig0031544:4498-4517 | Msa1446960:CDS | 30.0% | |
| AAAAGTTATGTTGTAACACG+AGG | + | tig0031544:4553-4572 | None:intergenic | 30.0% | |
| GTCGCAAAAATAAAACTCTA+AGG | - | tig0031544:4749-4768 | Msa1446960:intron | 30.0% | |
| !! | CAAAAATAAAACTCTAAGGC+TGG | - | tig0031544:4753-4772 | Msa1446960:intron | 30.0% |
| ! | TATACATACAATGTGTCGAT+GGG | + | tig0031544:4820-4839 | None:intergenic | 30.0% |
| ! | TTTTTATAGGACTAGGTAGA+TGG | + | tig0031544:4915-4934 | None:intergenic | 30.0% |
| ! | GCATTCTAGCTAAATATGTA+TGG | - | tig0031544:5107-5126 | Msa1446960:intron | 30.0% |
| AGTAAGTAAATTCCTTCTCA+AGG | - | tig0031544:5142-5161 | Msa1446960:intron | 30.0% | |
| ATATAAATTCGACAATGGGT+TGG | - | tig0031544:5407-5426 | Msa1446960:CDS | 30.0% | |
| ATGTAGAAAGAAAATGATGG+TGG | - | tig0031544:5445-5464 | Msa1446960:intron | 30.0% | |
| ! | TGGTGGTTCATTTTCATTAT+TGG | - | tig0031544:5462-5481 | Msa1446960:intron | 30.0% |
| ! | CGGAGTTGAAAAAAACTTTT+TGG | + | tig0031544:5504-5523 | None:intergenic | 30.0% |
| ! | AAATGCATGTTTAGGACATA+AGG | + | tig0031544:5687-5706 | None:intergenic | 30.0% |
| GTCCTAAACATGCATTTAAA+TGG | - | tig0031544:5690-5709 | Msa1446960:intron | 30.0% | |
| ! | TGCCATTTAAATGCATGTTT+AGG | + | tig0031544:5695-5714 | None:intergenic | 30.0% |
| TAAAGCACATAACAAAACTC+TGG | - | tig0031544:5757-5776 | Msa1446960:intron | 30.0% | |
| AAAGCACATAACAAAACTCT+GGG | - | tig0031544:5758-5777 | Msa1446960:intron | 30.0% | |
| TTGAAACTGATCATCAATGA+AGG | + | tig0031544:5883-5902 | None:intergenic | 30.0% | |
| CAACAATCTTTCCCTTTATT+TGG | - | tig0031544:5978-5997 | Msa1446960:intron | 30.0% | |
| GAAGATAATATTTGGCTGTT+TGG | + | tig0031544:6148-6167 | None:intergenic | 30.0% | |
| !! | AATTTGTTATAGTTTCCTCC+TGG | - | tig0031544:6233-6252 | Msa1446960:intron | 30.0% |
| ! | CTCAATGGAATCATTTTCAT+TGG | + | tig0031544:6441-6460 | None:intergenic | 30.0% |
| CAATGAAAATGATTCCATTG+AGG | - | tig0031544:6439-6458 | Msa1446960:intron | 30.0% | |
| AGAAGTTCGCAAAAACGAAA+CGG | + | tig0031544:1574-1593 | None:intergenic | 35.0% | |
| CTTCTTCAGTTTCATTTCTC+TGG | - | tig0031544:1589-1608 | Msa1446960:intron | 35.0% | |
| !! | GAGATGAACTTTTGATTACC+AGG | - | tig0031544:1731-1750 | Msa1446960:intron | 35.0% |
| TCACAGGATTTGTACAAGAA+CGG | + | tig0031544:2142-2161 | None:intergenic | 35.0% | |
| AGTATTGTCAATCACAATCG+CGG | + | tig0031544:2232-2251 | None:intergenic | 35.0% | |
| !! | ATATTGATTCAGGAAGCTAC+AGG | - | tig0031544:2459-2478 | Msa1446960:intron | 35.0% |
| ACAAGTTTCTCGATCTTGAT+GGG | - | tig0031544:2486-2505 | Msa1446960:intron | 35.0% | |
| TGGAAGACCTTACAATTTCA+CGG | - | tig0031544:2530-2549 | Msa1446960:intron | 35.0% | |
| GATTTACTGACATCATCTTG+AGG | + | tig0031544:2558-2577 | None:intergenic | 35.0% | |
| ! | CATTTTCTACCACATTGTGA+TGG | - | tig0031544:2728-2747 | Msa1446960:intron | 35.0% |
| CAAACAGGCTTATTACAATC+CGG | - | tig0031544:2816-2835 | Msa1446960:intron | 35.0% | |
| AAACAGGCTTATTACAATCC+GGG | - | tig0031544:2817-2836 | Msa1446960:intron | 35.0% | |
| TCAGTACATCTTGCAAAATC+AGG | - | tig0031544:2896-2915 | Msa1446960:intron | 35.0% | |
| AACAACTATGTGGGGTTTAT+TGG | + | tig0031544:3079-3098 | None:intergenic | 35.0% | |
| !!! | TGCAAAGGCTTTTTCAGAAA+TGG | - | tig0031544:3358-3377 | Msa1446960:intron | 35.0% |
| CAACCTGTAAGTTTAATGAC+TGG | - | tig0031544:3437-3456 | Msa1446960:intron | 35.0% | |
| ACCTGTAAGTTTAATGACTG+GGG | - | tig0031544:3439-3458 | Msa1446960:intron | 35.0% | |
| GAACAAATTGTACCTCATTG+AGG | + | tig0031544:3518-3537 | None:intergenic | 35.0% | |
| CTAACTTCGAAACATAACAG+TGG | + | tig0031544:3722-3741 | None:intergenic | 35.0% | |
| GTCTAATTACATCCTTTCTG+TGG | - | tig0031544:3822-3841 | Msa1446960:three_prime_UTR | 35.0% | |
| TTCCTTGTAGAAAATCCATC+TGG | - | tig0031544:4037-4056 | Msa1446960:intron | 35.0% | |
| CATTATGATATGCACACACT+TGG | - | tig0031544:4259-4278 | Msa1446960:three_prime_UTR | 35.0% | |
| !! | AGGAATGTCCTAGCTTTATA+AGG | - | tig0031544:4476-4495 | Msa1446960:CDS | 35.0% |
| TTAAGCACTAATGTAGGACT+CGG | - | tig0031544:4504-4523 | Msa1446960:CDS | 35.0% | |
| ! | AAGTGATGGAATGTAACCAT+GGG | - | tig0031544:4627-4646 | Msa1446960:intron | 35.0% |
| ! | TGTTAGTTTCGTACAAGTGT+CGG | - | tig0031544:4650-4669 | Msa1446960:intron | 35.0% |
| ! | ATACATACAATGTGTCGATG+GGG | + | tig0031544:4819-4838 | None:intergenic | 35.0% |
| CTATACATACAATGTGTCGA+TGG | + | tig0031544:4821-4840 | None:intergenic | 35.0% | |
| CATCGACACATTGTATGTAT+AGG | - | tig0031544:4819-4838 | Msa1446960:CDS | 35.0% | |
| AAATCTAGCAAGATTCGAGA+TGG | + | tig0031544:4863-4882 | None:intergenic | 35.0% | |
| TAACTATTGCCAATTTGGCA+TGG | + | tig0031544:4958-4977 | None:intergenic | 35.0% | |
| ! | TTAGCTGCATTTCTTTTGAC+AGG | - | tig0031544:5215-5234 | Msa1446960:intron | 35.0% |
| GATAACAAAACAGCTGTGTT+TGG | - | tig0031544:5590-5609 | Msa1446960:intron | 35.0% | |
| AAGGTCACAAGAAAAAGCAA+AGG | + | tig0031544:5668-5687 | None:intergenic | 35.0% | |
| ATCAAAGAAACGATGTTCTG+AGG | - | tig0031544:5848-5867 | Msa1446960:intron | 35.0% | |
| ! | ACTAGGTGGATTCAATTACA+TGG | + | tig0031544:6066-6085 | None:intergenic | 35.0% |
| ATGTAATTGAATCCACCTAG+TGG | - | tig0031544:6065-6084 | Msa1446960:intron | 35.0% | |
| GTTGTATGATCATAGGATCT+TGG | - | tig0031544:6118-6137 | Msa1446960:intron | 35.0% | |
| ! | TTGATTACCAGGACCTTTTG+CGG | - | tig0031544:1742-1761 | Msa1446960:intron | 40.0% |
| TCAATCACAATCGCGGAAAA+TGG | + | tig0031544:2225-2244 | None:intergenic | 40.0% | |
| GCGATTGTGATTGACAATAC+TGG | - | tig0031544:2231-2250 | Msa1446960:intron | 40.0% | |
| CACAAGTTTCTCGATCTTGA+TGG | - | tig0031544:2485-2504 | Msa1446960:intron | 40.0% | |
| CAAGTTTCTCGATCTTGATG+GGG | - | tig0031544:2487-2506 | Msa1446960:intron | 40.0% | |
| ! | TGTGGTAACGTAGGTTTGTT+TGG | + | tig0031544:2681-2700 | None:intergenic | 40.0% |
| ACAAACCTACGTTACCACAT+TGG | - | tig0031544:2682-2701 | Msa1446960:intron | 40.0% | |
| ACGAAGATACCATCACAATG+TGG | + | tig0031544:2740-2759 | None:intergenic | 40.0% | |
| GGATGATTATAAAAGGGGCT+TGG | + | tig0031544:2849-2868 | None:intergenic | 40.0% | |
| GCATGCTTCTTTCTTAGACT+AGG | - | tig0031544:2948-2967 | Msa1446960:intron | 40.0% | |
| TCTTTCTTAGACTAGGACAG+AGG | - | tig0031544:2955-2974 | Msa1446960:intron | 40.0% | |
| CTTTCTTAGACTAGGACAGA+GGG | - | tig0031544:2956-2975 | Msa1446960:intron | 40.0% | |
| !! | CATTCTTTGTTGTTTGGTGC+AGG | - | tig0031544:3002-3021 | Msa1446960:intron | 40.0% |
| TAAACCCCACATAGTTGTTG+AGG | - | tig0031544:3080-3099 | Msa1446960:intron | 40.0% | |
| !! | ATATTTCTTTAGGGTGGGGT+TGG | - | tig0031544:3213-3232 | Msa1446960:intron | 40.0% |
| !! | TATTTCTTTAGGGTGGGGTT+GGG | - | tig0031544:3214-3233 | Msa1446960:intron | 40.0% |
| TTGGGGTTACCAATTACTAG+TGG | - | tig0031544:3232-3251 | Msa1446960:intron | 40.0% | |
| TCCCCAGTCATTAAACTTAC+AGG | + | tig0031544:3443-3462 | None:intergenic | 40.0% | |
| TTCTGCACCCAAAAATGACA+GGG | - | tig0031544:3486-3505 | Msa1446960:intron | 40.0% | |
| !!! | GTTCCATCCCTGTCATTTTT+GGG | + | tig0031544:3496-3515 | None:intergenic | 40.0% |
| AATTACATCCTTTCTGTGGC+AGG | - | tig0031544:3826-3845 | Msa1446960:three_prime_UTR | 40.0% | |
| TCTAACATGATTACTGCGGA+TGG | - | tig0031544:3875-3894 | Msa1446960:intron | 40.0% | |
| TACTGCGGATGGTAAGATTA+TGG | - | tig0031544:3886-3905 | Msa1446960:intron | 40.0% | |
| !! | GACCAGATGGATTTTCTACA+AGG | + | tig0031544:4042-4061 | None:intergenic | 40.0% |
| TGTAGAAAATCCATCTGGTC+TGG | - | tig0031544:4042-4061 | Msa1446960:intron | 40.0% | |
| AACATCAACGTCAACAACGT+CGG | + | tig0031544:4104-4123 | None:intergenic | 40.0% | |
| CAATCGCAGATGACACAAAA+TGG | + | tig0031544:4387-4406 | None:intergenic | 40.0% | |
| ACATTCCTTACCTTACGAGT+CGG | + | tig0031544:4464-4483 | None:intergenic | 40.0% | |
| ! | GAAGTGATGGAATGTAACCA+TGG | - | tig0031544:4626-4645 | Msa1446960:intron | 40.0% |
| TTGTACGAAACTAACACCCA+TGG | + | tig0031544:4646-4665 | None:intergenic | 40.0% | |
| ACATCGACGCTTCAAATTGA+AGG | + | tig0031544:4706-4725 | None:intergenic | 40.0% | |
| CAAACTTAGCAACCTTGAGA+AGG | + | tig0031544:5157-5176 | None:intergenic | 40.0% | |
| ! | CTGCATTTCTTTTGACAGGA+AGG | - | tig0031544:5219-5238 | Msa1446960:intron | 40.0% |
| ! | AGTCTGCTCTTTTTACCACT+AGG | + | tig0031544:6083-6102 | None:intergenic | 40.0% |
| ATAGCTCTTCACATTCTTGC+TGG | + | tig0031544:6334-6353 | None:intergenic | 40.0% | |
| ! | TAAGCTTTCTGAGGAATGTC+TGG | - | tig0031544:6409-6428 | Msa1446960:intron | 40.0% |
| AACGGTGAGAGAATGTTCTG+TGG | + | tig0031544:1556-1575 | None:intergenic | 45.0% | |
| ! | TGATTACCAGGACCTTTTGC+GGG | - | tig0031544:1743-1762 | Msa1446960:intron | 45.0% |
| CAGGATTTGTACAAGAACGG+AGG | + | tig0031544:2139-2158 | None:intergenic | 45.0% | |
| TTTCTCGATCTTGATGGGGA+AGG | - | tig0031544:2491-2510 | Msa1446960:intron | 45.0% | |
| AAGGAAGAATCCACTCCGTT+TGG | - | tig0031544:2510-2529 | Msa1446960:intron | 45.0% | |
| !! | TGAGGCACCGTGAAATTGTA+AGG | + | tig0031544:2540-2559 | None:intergenic | 45.0% |
| ! | GTAGTCCAATGTGGTAACGT+AGG | + | tig0031544:2690-2709 | None:intergenic | 45.0% |
| TGCATAGCTGTAGTCCAATG+TGG | + | tig0031544:2699-2718 | None:intergenic | 45.0% | |
| ACATTGGACTACAGCTATGC+AGG | - | tig0031544:2698-2717 | Msa1446960:intron | 45.0% | |
| GTGAAAGTGAAGCAGATGAC+TGG | + | tig0031544:2983-3002 | None:intergenic | 45.0% | |
| CTTCAACGTGATGCTCTACA+TGG | - | tig0031544:3039-3058 | Msa1446960:intron | 45.0% | |
| CTCACCTCAACAACTATGTG+GGG | + | tig0031544:3087-3106 | None:intergenic | 45.0% | |
| GCTCACCTCAACAACTATGT+GGG | + | tig0031544:3088-3107 | None:intergenic | 45.0% | |
| !! | ATTTCTTTAGGGTGGGGTTG+GGG | - | tig0031544:3215-3234 | Msa1446960:intron | 45.0% |
| ! | TTTTGGTCAGGATGCTGCAA+AGG | - | tig0031544:3343-3362 | Msa1446960:intron | 45.0% |
| GACTGGGGAATCAAGAGAAT+TGG | - | tig0031544:3454-3473 | Msa1446960:intron | 45.0% | |
| !!! | CATTTTTGGGTGCAGAAGAC+TGG | + | tig0031544:3483-3502 | None:intergenic | 45.0% |
| CTTCTGCACCCAAAAATGAC+AGG | - | tig0031544:3485-3504 | Msa1446960:intron | 45.0% | |
| !!! | GGTTCCATCCCTGTCATTTT+TGG | + | tig0031544:3497-3516 | None:intergenic | 45.0% |
| !!! | CTGTCATTTTGATCTCCCTC+TGG | + | tig0031544:3632-3651 | None:intergenic | 45.0% |
| TGAGCTGCAGTTCATGACTT+TGG | + | tig0031544:3991-4010 | None:intergenic | 45.0% | |
| AAATTCTGAGCCAGACCAGA+TGG | + | tig0031544:4055-4074 | None:intergenic | 45.0% | |
| ! | TCTGGTCTGGCTCAGAATTT+AGG | - | tig0031544:4055-4074 | Msa1446960:intron | 45.0% |
| ! | CTGGTCTGGCTCAGAATTTA+GGG | - | tig0031544:4056-4075 | Msa1446960:intron | 45.0% |
| GAATTTAGGGACAGTCGTCA+AGG | - | tig0031544:4069-4088 | Msa1446960:intron | 45.0% | |
| !! | TCTCATAAGACCGACTCGTA+AGG | - | tig0031544:4451-4470 | Msa1446960:CDS | 45.0% |
| !! | TAAGACCGACTCGTAAGGTA+AGG | - | tig0031544:4456-4475 | Msa1446960:CDS | 45.0% |
| ACGAGGTAGTGTGGACTTAT+TGG | + | tig0031544:4536-4555 | None:intergenic | 45.0% | |
| TGTTGTAACACGAGGTAGTG+TGG | + | tig0031544:4545-4564 | None:intergenic | 45.0% | |
| GGTACATACTAGACCATGAC+TGG | - | tig0031544:5314-5333 | Msa1446960:intron | 45.0% | |
| ! | CTGCTCTTTTTACCACTAGG+TGG | + | tig0031544:6080-6099 | None:intergenic | 45.0% |
| TCTTCACATTCTTGCTGGCA+AGG | + | tig0031544:6329-6348 | None:intergenic | 45.0% | |
| ! | AACGCTTGCTAAGCTTTCTG+AGG | - | tig0031544:6400-6419 | Msa1446960:intron | 45.0% |
| !!! | CTATTTTATTAAATTATTAT+TGG | + | tig0031544:4607-4626 | None:intergenic | 5.0% |
| GTAAGGTCTTCCAAACGGAG+TGG | + | tig0031544:2523-2542 | None:intergenic | 50.0% | |
| AAGTAAGGAGCAGCTGCAAG+TGG | + | tig0031544:2870-2889 | None:intergenic | 50.0% | |
| GGTTTATTGGACAGCCTCAC+GGG | + | tig0031544:3066-3085 | None:intergenic | 50.0% | |
| GGGTTTATTGGACAGCCTCA+CGG | + | tig0031544:3067-3086 | None:intergenic | 50.0% | |
| GGCTCACCTCAACAACTATG+TGG | + | tig0031544:3089-3108 | None:intergenic | 50.0% | |
| GCACCCAAAAATGACAGGGA+TGG | - | tig0031544:3490-3509 | Msa1446960:intron | 50.0% | |
| ACAGGGATGGAACCTCAATG+AGG | - | tig0031544:3503-3522 | Msa1446960:intron | 50.0% | |
| TGGAAGCAAGAGATCACCAG+AGG | - | tig0031544:3613-3632 | Msa1446960:intron | 50.0% | |
| GGAAGCAAGAGATCACCAGA+GGG | - | tig0031544:3614-3633 | Msa1446960:intron | 50.0% | |
| AGGAGAATCCTGCCACAGAA+AGG | + | tig0031544:3837-3856 | None:intergenic | 50.0% | |
| ACAAGATCAGTTGCGCATGC+AGG | + | tig0031544:4992-5011 | None:intergenic | 50.0% | |
| ! | GTGCATTGCAGCAGGTTTTG+TGG | - | tig0031544:5336-5355 | Msa1446960:CDS | 50.0% |
| GCTTAGCAAGCGTTTGTGCT+AGG | + | tig0031544:6394-6413 | None:intergenic | 50.0% | |
| ! | CCAGGACCTTTTGCGGGAAT+CGG | - | tig0031544:1749-1768 | Msa1446960:intron | 55.0% |
| ! | GACCTTTTGCGGGAATCGGA+GGG | - | tig0031544:1753-1772 | Msa1446960:intron | 55.0% |
| AACCCTCCGATTCCCGCAAA+AGG | + | tig0031544:1758-1777 | None:intergenic | 55.0% | |
| AAAGGGGCTTGGAGTAGACC+CGG | + | tig0031544:2838-2857 | None:intergenic | 55.0% | |
| ATGCTCTACATGGTCCCGTG+AGG | - | tig0031544:3049-3068 | Msa1446960:intron | 55.0% | |
| ! | GTCGATGGGGCATCTCATGT+GGG | + | tig0031544:4806-4825 | None:intergenic | 55.0% |
| ! | TGTCGATGGGGCATCTCATG+TGG | + | tig0031544:4807-4826 | None:intergenic | 55.0% |
| TCCACGACGCCATGCCAAAT+TGG | - | tig0031544:4946-4965 | Msa1446960:intron | 55.0% | |
| CTGCTGCAATGCACCAGTCA+TGG | + | tig0031544:5330-5349 | None:intergenic | 55.0% | |
| CATGACTGGTGCATTGCAGC+AGG | - | tig0031544:5328-5347 | Msa1446960:intron | 55.0% | |
| CCGATTCCCGCAAAAGGTCC+TGG | + | tig0031544:1752-1771 | None:intergenic | 60.0% | |
| ! | GGACCTTTTGCGGGAATCGG+AGG | - | tig0031544:1752-1771 | Msa1446960:intron | 60.0% |
| TGTGTGCGCAGTGCAGCAAG+TGG | - | tig0031544:3593-3612 | Msa1446960:intron | 60.0% | |
| GCCAATTTGGCATGGCGTCG+TGG | + | tig0031544:4950-4969 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0031544 | gene | 1427 | 6474 | 1427 | ID=Msa1446960;Name=Msa1446960 |
| tig0031544 | mRNA | 1427 | 6474 | 1427 | ID=Msa1446960-mRNA-1;Parent=Msa1446960;Name=Msa1446960-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|0.54|0.66|0.75|1|0.91|12|421|153 |
| tig0031544 | exon | 1427 | 1566 | 1427 | ID=Msa1446960-mRNA-1:exon:15701;Parent=Msa1446960-mRNA-1 |
| tig0031544 | exon | 2587 | 2664 | 2587 | ID=Msa1446960-mRNA-1:exon:15700;Parent=Msa1446960-mRNA-1 |
| tig0031544 | exon | 3757 | 3854 | 3757 | ID=Msa1446960-mRNA-1:exon:15699;Parent=Msa1446960-mRNA-1 |
| tig0031544 | exon | 4005 | 4053 | 4005 | ID=Msa1446960-mRNA-1:exon:15698;Parent=Msa1446960-mRNA-1 |
| tig0031544 | exon | 4243 | 4297 | 4243 | ID=Msa1446960-mRNA-1:exon:15697;Parent=Msa1446960-mRNA-1 |
| tig0031544 | exon | 4377 | 4548 | 4377 | ID=Msa1446960-mRNA-1:exon:15696;Parent=Msa1446960-mRNA-1 |
| tig0031544 | exon | 4671 | 4676 | 4671 | ID=Msa1446960-mRNA-1:exon:15695;Parent=Msa1446960-mRNA-1 |
| tig0031544 | exon | 4800 | 4877 | 4800 | ID=Msa1446960-mRNA-1:exon:15694;Parent=Msa1446960-mRNA-1 |
| tig0031544 | exon | 4984 | 5078 | 4984 | ID=Msa1446960-mRNA-1:exon:15693;Parent=Msa1446960-mRNA-1 |
| tig0031544 | exon | 5331 | 5430 | 5331 | ID=Msa1446960-mRNA-1:exon:15692;Parent=Msa1446960-mRNA-1 |
| tig0031544 | exon | 6005 | 6012 | 6005 | ID=Msa1446960-mRNA-1:exon:15691;Parent=Msa1446960-mRNA-1 |
| tig0031544 | exon | 6471 | 6474 | 6471 | ID=Msa1446960-mRNA-1:exon:15690;Parent=Msa1446960-mRNA-1 |
| tig0031544 | CDS | 6471 | 6474 | 6471 | ID=Msa1446960-mRNA-1:cds;Parent=Msa1446960-mRNA-1 |
| tig0031544 | CDS | 6005 | 6012 | 6005 | ID=Msa1446960-mRNA-1:cds;Parent=Msa1446960-mRNA-1 |
| tig0031544 | CDS | 5331 | 5430 | 5331 | ID=Msa1446960-mRNA-1:cds;Parent=Msa1446960-mRNA-1 |
| tig0031544 | CDS | 4984 | 5078 | 4984 | ID=Msa1446960-mRNA-1:cds;Parent=Msa1446960-mRNA-1 |
| tig0031544 | CDS | 4800 | 4877 | 4800 | ID=Msa1446960-mRNA-1:cds;Parent=Msa1446960-mRNA-1 |
| tig0031544 | CDS | 4671 | 4676 | 4671 | ID=Msa1446960-mRNA-1:cds;Parent=Msa1446960-mRNA-1 |
| tig0031544 | CDS | 4378 | 4548 | 4378 | ID=Msa1446960-mRNA-1:cds;Parent=Msa1446960-mRNA-1 |
| tig0031544 | three_prime_UTR | 4377 | 4377 | 4377 | ID=Msa1446960-mRNA-1:three_prime_utr;Parent=Msa1446960-mRNA-1 |
| tig0031544 | three_prime_UTR | 4243 | 4297 | 4243 | ID=Msa1446960-mRNA-1:three_prime_utr;Parent=Msa1446960-mRNA-1 |
| tig0031544 | three_prime_UTR | 4005 | 4053 | 4005 | ID=Msa1446960-mRNA-1:three_prime_utr;Parent=Msa1446960-mRNA-1 |
| tig0031544 | three_prime_UTR | 3757 | 3854 | 3757 | ID=Msa1446960-mRNA-1:three_prime_utr;Parent=Msa1446960-mRNA-1 |
| tig0031544 | three_prime_UTR | 2587 | 2664 | 2587 | ID=Msa1446960-mRNA-1:three_prime_utr;Parent=Msa1446960-mRNA-1 |
| tig0031544 | three_prime_UTR | 1427 | 1566 | 1427 | ID=Msa1446960-mRNA-1:three_prime_utr;Parent=Msa1446960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
