AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1336490


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1336490 MtrunA17_Chr5g0430131 93.190 279 19 0 81 359 232 510 0.0 543
Msa1336490 MtrunA17_Chr5g0430091 84.286 280 43 1 81 359 232 511 2.63e-176 499
Msa1336490 MtrunA17_Chr5g0430101 82.796 279 47 1 81 359 231 508 2.41e-168 479
Msa1336490 MtrunA17_Chr5g0430081 80.292 274 53 1 81 353 230 503 2.57e-165 471
Msa1336490 MtrunA17_Chr5g0430071 80.952 273 51 1 82 353 86 358 2.24e-164 464
Msa1336490 MtrunA17_Chr5g0430031 75.000 280 68 2 82 359 233 512 6.86e-151 435
Msa1336490 MtrunA17_Chr5g0430111 91.795 195 15 1 81 274 232 426 2.18e-121 357
Msa1336490 MtrunA17_Chr8g0390881 61.372 277 103 2 81 354 231 506 1.11e-120 358
Msa1336490 MtrunA17_Chr6g0484841 57.353 272 115 1 82 352 233 504 2.70e-111 334
Msa1336490 MtrunA17_Chr5g0430151 83.516 182 30 0 178 359 1 182 1.24e-110 320
Msa1336490 MtrunA17_Chr8g0390871 63.319 229 83 1 126 354 1 228 2.39e-108 316
Msa1336490 MtrunA17_Chr6g0484811 57.971 276 112 3 81 353 232 506 1.48e-107 324
Msa1336490 MtrunA17_Chr2g0310391 53.091 275 120 4 81 353 227 494 4.09e-97 297
Msa1336490 MtrunA17_Chr2g0310381 52.555 274 123 3 81 353 227 494 2.04e-96 295
Msa1336490 MtrunA17_Chr8g0382901 52.190 274 125 2 81 354 689 956 6.57e-96 305
Msa1336490 MtrunA17_Chr8g0382901 51.292 271 126 2 81 351 210 474 3.85e-91 293
Msa1336490 MtrunA17_Chr5g0430041 72.989 174 41 1 178 345 1 174 4.75e-89 265
Msa1336490 MtrunA17_Chr2g0310351 55.224 201 89 1 152 352 1 200 1.85e-79 241
Msa1336490 MtrunA17_Chr4g0035921 41.869 289 152 5 80 354 229 515 1.55e-75 242
Msa1336490 MtrunA17_Chr5g0405001 42.857 280 151 5 81 353 237 514 4.42e-75 241
Msa1336490 MtrunA17_Chr4g0020041 45.865 266 136 4 88 349 238 499 1.38e-73 236
Msa1336490 MtrunA17_Chr3g0101731 44.000 275 143 4 81 350 231 499 1.36e-72 234
Msa1336490 MtrunA17_Chr4g0047661 45.818 275 138 4 81 350 247 515 1.46e-72 234
Msa1336490 MtrunA17_Chr4g0047691 42.230 296 152 5 65 355 238 519 8.79e-72 232
Msa1336490 MtrunA17_Chr4g0058231 43.972 282 139 5 81 352 226 498 2.96e-71 230
Msa1336490 MtrunA17_Chr3g0116681 41.549 284 151 5 65 348 231 499 7.03e-71 229
Msa1336490 MtrunA17_Chr4g0047631 45.255 274 140 4 81 350 243 510 9.12e-71 229
Msa1336490 MtrunA17_Chr5g0403331 41.727 278 147 5 81 350 232 502 1.63e-70 228
Msa1336490 MtrunA17_Chr4g0047641 44.161 274 143 4 81 350 247 514 3.66e-70 228
Msa1336490 MtrunA17_Chr3g0101721 43.273 275 144 4 81 349 232 500 6.49e-70 227
Msa1336490 MtrunA17_Chr8g0344151 41.516 277 154 4 81 355 237 507 2.03e-69 226
Msa1336490 MtrunA17_Chr1g0162811 43.116 276 149 5 81 353 231 501 7.83e-68 221
Msa1336490 MtrunA17_Chr5g0445441 43.223 273 147 4 83 352 274 541 1.60e-67 221
Msa1336490 MtrunA17_Chr1g0167321 45.455 275 141 3 81 350 228 498 1.73e-67 221
Msa1336490 MtrunA17_Chr5g0431591 37.919 298 173 4 55 352 33 318 2.42e-67 215
Msa1336490 MtrunA17_Chr6g0472311 42.908 282 142 6 81 350 241 515 2.85e-67 220
Msa1336490 MtrunA17_Chr7g0254641 39.929 283 153 5 81 353 240 515 3.61e-67 220
Msa1336490 MtrunA17_Chr5g0403351 38.489 278 156 4 81 350 231 501 3.76e-67 219
Msa1336490 MtrunA17_Chr8g0344181 40.942 276 151 5 82 353 240 507 5.03e-67 219
Msa1336490 MtrunA17_Chr4g0024771 41.887 265 149 3 88 352 241 500 6.64e-67 219
Msa1336490 MtrunA17_Chr5g0431671 42.264 265 148 3 88 352 242 501 9.75e-67 218
Msa1336490 MtrunA17_Chr4g0058191 43.542 271 144 5 81 350 224 486 1.44e-66 218
Msa1336490 MtrunA17_Chr4g0011981 43.359 256 136 3 83 338 236 482 1.67e-66 218
Msa1336490 MtrunA17_Chr4g0058261 41.288 264 147 3 88 349 273 530 2.70e-66 218
Msa1336490 MtrunA17_Chr5g0403321 38.542 288 162 3 72 350 223 504 2.83e-66 218
Msa1336490 MtrunA17_Chr3g0101601 41.111 270 152 5 81 349 231 494 4.01e-66 217
Msa1336490 MtrunA17_Chr3g0101631 40.860 279 139 5 81 349 231 493 4.40e-66 217
Msa1336490 MtrunA17_Chr4g0011961 43.629 259 136 3 82 338 231 481 4.98e-66 216
Msa1336490 MtrunA17_Chr3g0101741 41.544 272 145 3 81 349 160 420 5.26e-66 214
Msa1336490 MtrunA17_Chr3g0116741 38.519 270 158 4 81 349 251 513 7.31e-66 217
Msa1336490 MtrunA17_Chr8g0372251 42.500 280 151 6 82 353 229 506 8.65e-66 216
Msa1336490 MtrunA17_Chr3g0094171 40.569 281 155 6 82 358 241 513 9.17e-66 216
Msa1336490 MtrunA17_Chr5g0445461 42.322 267 145 5 88 352 241 500 9.31e-66 216
Msa1336490 MtrunA17_Chr5g0431641 41.509 265 150 3 88 352 241 500 1.05e-65 216
Msa1336490 MtrunA17_Chr3g0101621 41.877 277 137 6 81 349 228 488 2.41e-65 214
Msa1336490 MtrunA17_Chr1g0162801 44.245 278 146 4 81 353 231 504 4.10e-65 214
Msa1336490 MtrunA17_Chr5g0445451 41.887 265 149 3 88 352 241 500 5.46e-65 214
Msa1336490 MtrunA17_Chr4g0076161 43.478 276 141 6 83 350 233 501 2.28e-64 212
Msa1336490 MtrunA17_Chr3g0101701 38.636 264 153 3 92 350 244 503 2.78e-64 212
Msa1336490 MtrunA17_Chr6g0463791 42.754 276 141 6 81 350 233 497 3.19e-64 212
Msa1336490 MtrunA17_Chr3g0101831 43.066 274 145 3 81 349 232 499 4.06e-64 212
Msa1336490 MtrunA17_Chr5g0445421 41.509 265 150 3 88 352 294 553 4.09e-64 213
Msa1336490 MtrunA17_Chr7g0218611 42.164 268 142 5 82 345 235 493 5.97e-64 211
Msa1336490 MtrunA17_Chr8g0361471 38.545 275 158 3 81 349 229 498 6.47e-64 211
Msa1336490 MtrunA17_Chr6g0466331 38.909 275 157 4 81 349 229 498 7.66e-64 211
Msa1336490 MtrunA17_Chr6g0465511 38.909 275 157 4 81 349 229 498 9.07e-64 211
Msa1336490 MtrunA17_Chr3g0094231 40.364 275 151 5 82 353 236 500 2.00e-63 210
Msa1336490 MtrunA17_Chr3g0101811 38.542 288 152 4 81 349 232 513 3.73e-63 209
Msa1336490 MtrunA17_Chr3g0101691 37.226 274 163 3 81 349 233 502 6.82e-63 208
Msa1336490 MtrunA17_Chr1g0156101 39.249 293 168 5 63 352 227 512 9.31e-63 208
Msa1336490 MtrunA17_Chr3g0101671 38.545 275 158 4 81 349 233 502 1.01e-62 208
Msa1336490 MtrunA17_Chr3g0086691 41.667 276 152 4 82 353 237 507 1.24e-62 208
Msa1336490 MtrunA17_Chr3g0101711 37.079 267 159 3 88 349 239 501 1.36e-62 208
Msa1336490 MtrunA17_Chr3g0101821 41.455 275 149 3 81 349 230 498 2.72e-62 207
Msa1336490 MtrunA17_Chr3g0101661 37.828 267 158 3 88 350 240 502 2.79e-62 207
Msa1336490 MtrunA17_Chr5g0445381 42.366 262 146 3 88 349 272 528 3.37e-62 207
Msa1336490 MtrunA17_Chr4g0011941 45.729 199 107 1 152 350 1 198 4.80e-62 197
Msa1336490 MtrunA17_Chr6g0463801 40.441 272 150 3 81 349 232 494 5.57e-62 206
Msa1336490 MtrunA17_Chr5g0446161 38.745 271 155 6 81 349 236 497 6.46e-62 206
Msa1336490 MtrunA17_Chr4g0011851 45.918 196 105 1 143 338 7 201 8.97e-62 197
Msa1336490 MtrunA17_Chr4g0058281 41.132 265 141 5 92 349 255 511 1.59e-61 205
Msa1336490 MtrunA17_Chr3g0101581 39.416 274 156 4 81 350 233 500 1.98e-61 205
Msa1336490 MtrunA17_Chr4g0011921 45.038 262 129 5 82 338 231 482 2.73e-61 204
Msa1336490 MtrunA17_Chr4g0011901 41.418 268 150 3 82 348 231 492 3.83e-61 204
Msa1336490 MtrunA17_Chr1g0174471 39.427 279 158 6 81 354 250 522 4.49e-61 204
Msa1336490 MtrunA17_Chr8g0344191 39.483 271 153 6 82 348 271 534 6.46e-61 204
Msa1336490 MtrunA17_Chr3g0101651 37.455 275 163 3 81 350 233 503 9.14e-61 203
Msa1336490 MtrunA17_Chr3g0101761 41.697 271 146 3 81 345 230 494 9.94e-61 203
Msa1336490 MtrunA17_Chr4g0061381 41.516 277 151 5 82 354 236 505 1.18e-60 202
Msa1336490 MtrunA17_Chr3g0101571 38.182 275 158 4 81 350 230 497 1.44e-60 202
Msa1336490 MtrunA17_Chr5g0446151 38.148 270 157 5 82 349 237 498 1.56e-60 202
Msa1336490 MtrunA17_Chr5g0419691 41.538 260 143 4 81 338 230 482 1.81e-60 202
Msa1336490 MtrunA17_Chr1g0174451 39.502 281 152 7 82 354 237 507 1.93e-60 202
Msa1336490 MtrunA17_Chr4g0056951 38.628 277 158 4 82 355 244 511 6.27e-60 201
Msa1336490 MtrunA17_Chr4g0058201 40.441 272 154 5 81 350 226 491 6.27e-60 201
Msa1336490 MtrunA17_Chr8g0362481 40.141 284 145 8 82 354 168 437 6.45e-60 199
Msa1336490 MtrunA17_Chr3g0101611 40.794 277 148 4 81 349 232 500 7.05e-60 201
Msa1336490 MtrunA17_Chr7g0218601 41.860 258 135 6 92 345 246 492 1.19e-59 200
Msa1336490 MtrunA17_Chr3g0084921 40.418 287 146 7 82 353 235 511 2.91e-59 199
Msa1336490 MtrunA17_Chr3g0101801 41.667 276 145 4 82 349 238 505 3.37e-59 199
Msa1336490 MtrunA17_Chr4g0058211 46.500 200 104 2 151 350 18 214 3.66e-59 190
Msa1336490 MtrunA17_Chr4g0011871 38.351 279 161 5 62 338 214 483 4.41e-59 198
Msa1336490 MtrunA17_Chr5g0445531 38.433 268 159 3 85 352 238 499 4.60e-59 198
Msa1336490 MtrunA17_Chr3g0086651 41.516 277 153 5 82 354 237 508 6.47e-59 198
Msa1336490 MtrunA17_Chr3g0086661 41.516 277 153 5 82 354 237 508 1.04e-58 198
Msa1336490 MtrunA17_Chr7g0258221 41.071 280 151 6 82 354 234 506 4.21e-58 196
Msa1336490 MtrunA17_Chr4g0011881 39.437 284 164 4 62 345 214 489 4.56e-58 196
Msa1336490 MtrunA17_Chr1g0164211 40.865 208 122 1 142 349 285 491 5.51e-58 195
Msa1336490 MtrunA17_Chr5g0406651 41.852 270 140 5 82 345 232 490 1.17e-57 194
Msa1336490 MtrunA17_Chr1g0174481 38.489 278 156 6 81 353 233 500 1.29e-57 194
Msa1336490 MtrunA17_Chr4g0030711 35.836 293 161 6 82 354 237 522 3.54e-57 194
Msa1336490 MtrunA17_Chr7g0246221 37.358 265 159 3 83 347 241 498 4.74e-57 193
Msa1336490 MtrunA17_Chr5g0446101 36.431 269 162 4 81 349 51 310 1.28e-56 187
Msa1336490 MtrunA17_Chr5g0431511 34.875 281 163 5 81 353 235 503 2.28e-56 191
Msa1336490 MtrunA17_Chr8g0362701 38.028 284 151 8 82 354 237 506 2.34e-56 191
Msa1336490 MtrunA17_Chr1g0156081 39.249 293 168 5 63 352 251 536 2.79e-56 192
Msa1336490 MtrunA17_Chr7g0255531 37.308 260 152 3 95 353 248 497 2.81e-56 191
Msa1336490 MtrunA17_Chr3g0101751 39.483 271 152 3 81 345 237 501 3.23e-56 191
Msa1336490 MtrunA17_Chr4g0030701 36.177 293 161 6 81 354 234 519 6.59e-56 191
Msa1336490 MtrunA17_Chr8g0357431 40.741 270 159 1 81 350 232 500 1.03e-55 190
Msa1336490 MtrunA17_Chr7g0246151 35.547 256 161 2 92 347 246 497 1.28e-55 189
Msa1336490 MtrunA17_Chr1g0174441 41.909 241 130 6 116 354 296 528 2.29e-55 189
Msa1336490 MtrunA17_Chr1g0174461 37.722 281 157 7 82 354 236 506 4.77e-55 188
Msa1336490 MtrunA17_Chr4g0057001 40.417 240 134 3 116 355 286 516 5.55e-55 188
Msa1336490 MtrunA17_Chr8g0357421 41.699 259 141 3 96 350 247 499 7.69e-55 187
Msa1336490 MtrunA17_Chr1g0156061 39.855 276 155 5 82 352 199 468 7.99e-55 186
Msa1336490 MtrunA17_Chr8g0356001 36.087 230 143 2 120 349 278 503 1.09e-54 187
Msa1336490 MtrunA17_Chr1g0205361 34.191 272 167 4 85 354 238 499 1.18e-54 187
Msa1336490 MtrunA17_Chr4g0039901 37.500 224 139 1 125 348 273 495 2.38e-54 186
Msa1336490 MtrunA17_Chr7g0258211 37.193 285 154 7 82 354 240 511 3.16e-54 186
Msa1336490 MtrunA17_Chr7g0265611 38.745 271 157 5 82 349 250 514 3.19e-54 186
Msa1336490 MtrunA17_Chr7g0246121 43.939 198 110 1 148 345 297 493 4.63e-54 185
Msa1336490 MtrunA17_Chr5g0395331 36.555 238 142 3 114 350 274 503 9.76e-54 184
Msa1336490 MtrunA17_Chr1g0207841 37.201 293 155 7 82 354 238 521 1.17e-53 184
Msa1336490 MtrunA17_Chr2g0280261 39.636 275 150 5 81 350 229 492 1.75e-53 184
Msa1336490 MtrunA17_Chr7g0235551 36.559 279 160 6 81 349 233 504 2.24e-53 184
Msa1336490 MtrunA17_Chr6g0463621 44.390 205 104 4 152 350 1 201 3.83e-53 174
Msa1336490 MtrunA17_Chr5g0431501 36.293 259 157 3 81 337 235 487 3.84e-53 183
Msa1336490 MtrunA17_Chr5g0431461 36.293 259 157 3 81 337 235 487 3.84e-53 183
Msa1336490 MtrunA17_Chr4g0008101 39.643 280 154 7 81 354 254 524 4.83e-53 183
Msa1336490 MtrunA17_Chr5g0395381 36.792 212 132 2 140 350 261 471 5.20e-53 182
Msa1336490 MtrunA17_Chr5g0395321 37.736 212 130 2 140 350 286 496 1.04e-52 182
Msa1336490 MtrunA17_Chr3g0101591 42.000 200 115 1 151 350 38 236 1.17e-52 174
Msa1336490 MtrunA17_Chr4g0053621 38.321 274 151 5 81 354 241 496 2.05e-52 181
Msa1336490 MtrunA17_Chr5g0445371 37.970 266 129 5 88 353 2 231 2.59e-52 174
Msa1336490 MtrunA17_Chr6g0451781 37.544 285 163 7 81 359 287 562 5.49e-52 181
Msa1336490 MtrunA17_Chr1g0160851 34.082 267 164 4 85 349 238 494 1.32e-51 179
Msa1336490 MtrunA17_Chr7g0246131 39.565 230 137 2 118 347 272 499 1.56e-51 179
Msa1336490 MtrunA17_Chr1g0213671 37.269 271 163 6 81 349 239 504 2.12e-51 179
Msa1336490 MtrunA17_Chr4g0028321 54.015 137 61 2 219 354 24 159 2.28e-51 168
Msa1336490 MtrunA17_Chr2g0304871 39.711 277 154 7 81 353 247 514 3.54e-51 178
Msa1336490 MtrunA17_Chr4g0046351 35.714 280 150 7 95 352 241 512 3.83e-51 178
Msa1336490 MtrunA17_Chr1g0160861 33.582 268 164 5 85 349 79 335 4.27e-51 173
Msa1336490 MtrunA17_Chr1g0197891 36.220 254 147 5 84 335 238 478 4.77e-51 177
Msa1336490 MtrunA17_Chr6g0451751 37.234 282 160 7 81 354 254 526 4.97e-51 177
Msa1336490 MtrunA17_Chr1g0197881 35.379 277 153 7 84 358 237 489 6.12e-51 177
Msa1336490 MtrunA17_Chr1g0174431 42.584 209 110 4 152 353 1 206 7.16e-51 169
Msa1336490 MtrunA17_Chr6g0451691 37.681 276 155 7 81 348 256 522 1.01e-50 177
Msa1336490 MtrunA17_Chr3g0082701 37.979 287 161 6 81 359 253 530 1.02e-50 177
Msa1336490 MtrunA17_Chr8g0351801 35.789 285 156 7 90 354 243 520 1.84e-50 176
Msa1336490 MtrunA17_Chr1g0200961 36.264 273 162 3 82 349 229 494 2.25e-50 175
Msa1336490 MtrunA17_Chr1g0197851 35.433 254 149 5 84 335 238 478 3.83e-50 174
Msa1336490 MtrunA17_Chr4g0046321 35.563 284 153 8 95 356 241 516 1.50e-49 174
Msa1336490 MtrunA17_Chr1g0197871 36.585 246 141 5 89 332 243 475 2.09e-49 172
Msa1336490 MtrunA17_Chr5g0401681 38.235 272 149 6 81 352 238 490 2.93e-49 172
Msa1336490 MtrunA17_Chr6g0451741 37.413 286 163 7 81 359 275 551 7.28e-49 172
Msa1336490 MtrunA17_Chr6g0451641 36.786 280 155 7 84 351 251 520 9.51e-49 171
Msa1336490 MtrunA17_Chr7g0224551 34.333 300 156 9 82 353 223 509 1.07e-48 171
Msa1336490 MtrunA17_Chr5g0445761 48.876 178 90 1 152 329 1 177 1.53e-48 162
Msa1336490 MtrunA17_Chr2g0314731 39.614 207 117 3 114 320 267 465 2.35e-48 170
Msa1336490 MtrunA17_Chr7g0224561 33.667 300 158 9 82 353 223 509 5.83e-48 169
Msa1336490 MtrunA17_Chr6g0451681 38.298 235 134 4 116 348 246 471 8.37e-48 168
Msa1336490 MtrunA17_Chr7g0246181 37.218 266 156 4 83 347 242 497 8.40e-48 169
Msa1336490 MtrunA17_Chr8g0355961 36.522 230 142 2 120 349 278 503 9.40e-48 169
Msa1336490 MtrunA17_Chr6g0458561 34.686 271 164 6 85 353 268 527 1.11e-47 169
Msa1336490 MtrunA17_Chr5g0401691 35.955 267 155 5 81 347 252 502 1.85e-47 168
Msa1336490 MtrunA17_Chr1g0205371 35.206 267 161 4 85 349 239 495 2.73e-47 167
Msa1336490 MtrunA17_Chr6g0451811 39.252 214 124 3 148 359 1 210 3.61e-47 159
Msa1336490 MtrunA17_Chr4g0046331 32.877 292 164 8 85 352 231 514 8.57e-47 166
Msa1336490 MtrunA17_Chr2g0314721 36.066 244 145 5 78 320 243 476 1.14e-46 166
Msa1336490 MtrunA17_Chr4g0039391 35.540 287 161 5 80 352 223 499 1.24e-46 166
Msa1336490 MtrunA17_Chr8g0339331 33.333 273 170 6 85 354 252 515 2.47e-46 165
Msa1336490 MtrunA17_Chr5g0423621 39.560 182 107 2 168 349 1 179 8.82e-46 154
Msa1336490 MtrunA17_Chr4g0052861 40.952 210 115 3 143 352 290 490 1.11e-45 163
Msa1336490 MtrunA17_Chr1g0176831 37.198 207 122 2 114 320 297 495 1.75e-45 162
Msa1336490 MtrunA17_Chr4g0052881 37.407 270 150 7 83 352 241 491 6.85e-45 160
Msa1336490 MtrunA17_Chr8g0346261 40.336 238 124 8 86 318 289 513 7.09e-45 161
Msa1336490 MtrunA17_Chr5g0445351 45.783 166 89 1 180 345 52 216 1.79e-44 152
Msa1336490 MtrunA17_Chr6g0466901 38.843 242 135 6 82 316 247 482 2.24e-44 160
Msa1336490 MtrunA17_Chr6g0466941 39.754 244 133 6 81 316 246 483 2.36e-44 160
Msa1336490 MtrunA17_Chr4g0046631 37.456 283 158 6 81 358 255 523 2.57e-44 159
Msa1336490 MtrunA17_Chr6g0451771 40.094 212 117 4 143 348 9 216 1.14e-43 150
Msa1336490 MtrunA17_Chr8g0339311 33.212 274 164 6 88 353 260 522 1.61e-43 157
Msa1336490 MtrunA17_Chr5g0402981 41.000 200 111 4 163 359 3 198 1.89e-43 149
Msa1336490 MtrunA17_Chr1g0200951 38.589 241 127 7 87 318 269 497 5.15e-43 156
Msa1336490 MtrunA17_Chr4g0046681 40.000 205 117 4 152 354 31 231 4.00e-42 147
Msa1336490 MtrunA17_Chr5g0419451 35.124 242 142 6 81 318 256 486 1.96e-41 152
Msa1336490 MtrunA17_Chr2g0314781 40.523 153 90 1 168 320 1 152 2.94e-41 142
Msa1336490 MtrunA17_Chr4g0052851 33.333 273 162 7 81 352 229 482 5.48e-40 147
Msa1336490 MtrunA17_Chr2g0296661 36.803 269 151 7 81 348 241 491 1.19e-39 146
Msa1336490 MtrunA17_Chr4g0017411 42.857 175 94 3 145 319 280 448 9.43e-39 144
Msa1336490 MtrunA17_Chr2g0296651 31.111 270 167 6 83 352 240 490 2.23e-38 143
Msa1336490 MtrunA17_Chr8g0377341 34.241 257 156 6 82 337 268 512 2.23e-38 143
Msa1336490 MtrunA17_Chr4g0076171 40.212 189 85 4 168 350 1 167 4.08e-38 134
Msa1336490 MtrunA17_Chr8g0370641 30.292 274 176 6 83 353 258 519 8.38e-38 142
Msa1336490 MtrunA17_Chr5g0445361 49.219 128 64 1 222 349 8 134 3.30e-37 130
Msa1336490 MtrunA17_Chr3g0101541 45.985 137 73 1 200 336 1 136 2.36e-36 128
Msa1336490 MtrunA17_Chr8g0370651 28.102 274 182 6 83 353 262 523 3.53e-35 134
Msa1336490 MtrunA17_Chr3g0117301 45.000 120 65 1 203 322 1 119 7.09e-35 124
Msa1336490 MtrunA17_Chr4g0046661 39.720 214 123 4 143 354 16 225 3.30e-34 126
Msa1336490 MtrunA17_Chr3g0107551 33.708 178 114 2 151 325 4 180 1.11e-33 124
Msa1336490 MtrunA17_Chr5g0432751 32.068 237 155 3 82 316 237 469 6.05e-33 128
Msa1336490 MtrunA17_Chr1g0210091 35.545 211 125 4 132 336 314 519 2.45e-32 127
Msa1336490 MtrunA17_Chr3g0107541 30.660 212 137 3 117 325 297 501 3.44e-32 126
Msa1336490 MtrunA17_Chr4g0046701 42.331 163 88 4 194 354 1 159 1.49e-31 117
Msa1336490 MtrunA17_Chr3g0086681 40.000 160 91 2 199 354 12 170 1.86e-31 117
Msa1336490 MtrunA17_Chr3g0107611 28.395 243 164 4 90 329 275 510 1.89e-31 124
Msa1336490 MtrunA17_Chr1g0198191 36.571 175 106 4 147 318 311 483 3.77e-30 120
Msa1336490 MtrunA17_Chr3g0105761 32.386 176 113 3 153 325 1 173 2.08e-29 112
Msa1336490 MtrunA17_Chr3g0116731 39.865 148 73 3 203 350 1 132 2.34e-29 110
Msa1336490 MtrunA17_Chr2g0280011 31.188 202 130 5 155 349 11 210 2.79e-28 109
Msa1336490 MtrunA17_Chr2g0280061 31.683 202 129 5 155 349 11 210 4.31e-28 109
Msa1336490 MtrunA17_Chr6g0477081 39.552 134 76 1 131 259 105 238 4.40e-28 110
Msa1336490 MtrunA17_Chr5g0444981 34.857 175 112 2 161 335 20 192 7.09e-28 108
Msa1336490 MtrunA17_Chr2g0280071 29.612 206 136 5 151 349 332 535 3.03e-27 113
Msa1336490 MtrunA17_Chr2g0280081 25.818 275 194 6 83 349 731 1003 3.24e-26 110
Msa1336490 MtrunA17_Chr2g0280081 31.373 204 128 6 155 351 303 501 1.08e-24 105
Msa1336490 MtrunA17_Chr8g0387101 31.527 203 130 5 155 349 304 505 3.55e-26 109
Msa1336490 MtrunA17_Chr2g0280121 28.185 259 173 7 89 339 245 498 6.45e-25 105
Msa1336490 MtrunA17_Chr4g0074581 30.041 243 153 8 111 348 308 538 9.36e-25 105
Msa1336490 MtrunA17_Chr8g0364651 28.216 241 154 6 104 339 261 487 1.13e-24 104
Msa1336490 MtrunA17_Chr5g0409051 26.000 300 204 8 51 339 203 495 1.79e-24 104
Msa1336490 MtrunA17_Chr2g0334021 29.339 242 149 8 83 320 247 470 2.14e-24 103
Msa1336490 MtrunA17_Chr5g0413911 30.811 185 122 4 140 319 315 498 6.03e-24 102
Msa1336490 MtrunA17_Chr8g0351391 28.571 189 125 2 141 319 294 482 2.37e-23 100
Msa1336490 MtrunA17_Chr0c19g0493771 28.505 214 142 5 149 354 450 660 9.89e-23 99.8
Msa1336490 MtrunA17_Chr8g0381571 30.085 236 139 9 89 316 238 455 1.84e-22 98.2
Msa1336490 MtrunA17_Chr8g0381541 30.085 236 139 9 89 316 238 455 2.44e-22 97.8
Msa1336490 MtrunA17_Chr2g0280041 29.703 202 133 5 155 349 335 534 3.96e-22 97.4
Msa1336490 MtrunA17_Chr8g0372591 31.200 125 85 1 150 274 1 124 8.85e-22 90.1
Msa1336490 MtrunA17_Chr1g0179811 26.014 296 196 7 63 353 263 540 6.98e-21 94.0
Msa1336490 MtrunA17_Chr8g0351401 23.656 279 196 4 82 349 237 509 9.70e-21 93.2
Msa1336490 MtrunA17_Chr1g0204271 29.787 188 120 4 141 316 289 476 1.79e-20 92.4
Msa1336490 MtrunA17_Chr6g0449331 26.512 215 151 4 119 327 284 497 3.21e-20 91.7
Msa1336490 MtrunA17_Chr8g0351311 26.984 189 128 2 141 319 295 483 7.34e-20 90.9
Msa1336490 MtrunA17_Chr4g0030761 30.625 160 83 4 203 352 1 142 1.49e-19 84.3
Msa1336490 MtrunA17_Chr8g0351421 27.737 274 171 9 92 349 247 509 1.49e-19 89.7
Msa1336490 MtrunA17_Chr5g0396521 27.111 225 131 6 124 320 323 542 2.51e-19 89.4
Msa1336490 MtrunA17_Chr8g0351441 25.000 272 181 6 92 349 246 508 8.58e-19 87.4
Msa1336490 MtrunA17_Chr6g0449341 24.609 256 181 5 83 327 291 545 1.01e-18 87.4
Msa1336490 MtrunA17_Chr4g0004481 29.050 179 122 2 140 313 280 458 1.42e-18 86.7
Msa1336490 MtrunA17_Chr1g0163451 28.426 197 136 2 126 317 298 494 1.73e-18 86.7
Msa1336490 MtrunA17_Chr6g0449361 25.000 232 163 4 82 307 237 463 2.36e-18 86.3
Msa1336490 MtrunA17_Chr6g0449351 24.348 230 167 3 82 307 197 423 3.12e-18 85.9
Msa1336490 MtrunA17_Chr6g0449381 27.706 231 153 6 88 308 240 466 3.27e-18 85.9
Msa1336490 MtrunA17_Chr4g0038271 25.000 276 182 6 82 339 287 555 4.79e-18 85.5
Msa1336490 MtrunA17_Chr7g0260831 26.471 272 166 9 86 339 244 499 5.56e-18 85.1
Msa1336490 MtrunA17_Chr2g0313791 26.190 252 164 7 85 327 249 487 7.99e-18 84.7
Msa1336490 MtrunA17_Chr1g0203141 26.939 245 160 6 87 327 262 491 8.50e-18 84.7
Msa1336490 MtrunA17_Chr1g0163281 24.583 240 165 5 82 313 254 485 1.01e-17 84.3
Msa1336490 MtrunA17_Chr2g0293411 32.995 197 116 7 125 316 268 453 1.51e-17 83.6
Msa1336490 MtrunA17_Chr8g0351461 24.164 269 187 5 92 349 246 508 1.82e-17 83.6
Msa1336490 MtrunA17_Chr6g0484761 57.407 54 23 0 300 353 1 54 2.39e-17 75.5
Msa1336490 MtrunA17_Chr1g0184421 26.923 182 123 4 141 316 294 471 3.51e-17 82.8
Msa1336490 MtrunA17_Chr5g0429651 25.957 235 156 5 92 313 245 474 4.60e-17 82.4
Msa1336490 MtrunA17_Chr1g0163421 27.919 197 137 2 126 317 314 510 4.79e-17 82.4
Msa1336490 MtrunA17_Chr1g0203151 25.751 233 166 5 87 319 258 483 5.01e-17 82.4
Msa1336490 MtrunA17_Chr1g0164321 23.413 252 166 5 82 313 269 513 1.18e-16 81.3
Msa1336490 MtrunA17_Chr2g0288661 25.523 239 172 5 85 320 256 491 1.27e-16 80.9
Msa1336490 MtrunA17_Chr1g0183611 27.179 195 129 4 133 320 206 394 1.53e-16 80.5
Msa1336490 MtrunA17_Chr8g0354571 26.136 264 174 7 88 339 265 519 1.77e-16 80.5
Msa1336490 MtrunA17_Chr6g0479681 25.000 248 165 6 87 319 260 501 2.25e-16 80.5
Msa1336490 MtrunA17_Chr6g0457421 25.581 258 178 8 85 339 256 502 2.28e-16 80.1
Msa1336490 MtrunA17_Chr4g0063221 28.125 160 114 1 151 310 324 482 2.55e-16 80.1
Msa1336490 MtrunA17_Chr7g0260821 26.442 208 136 5 145 339 297 500 2.79e-16 80.1
Msa1336490 MtrunA17_Chr1g0163371 25.683 183 131 2 140 317 10 192 3.18e-16 77.0
Msa1336490 MtrunA17_Chr1g0184461 26.923 182 123 4 141 316 294 471 4.10e-16 79.3
Msa1336490 MtrunA17_Chr8g0380501 27.957 186 127 3 129 308 268 452 1.17e-15 78.2
Msa1336490 MtrunA17_Chr2g0307291 24.686 239 174 5 85 320 256 491 1.20e-15 78.2
Msa1336490 MtrunA17_Chr4g0026941 21.941 237 173 2 82 317 283 508 1.27e-15 78.2
Msa1336490 MtrunA17_Chr7g0227291 27.556 225 149 5 89 308 240 455 1.56e-15 77.8
Msa1336490 MtrunA17_Chr1g0154731 27.126 247 156 8 85 327 253 479 1.58e-15 77.8
Msa1336490 MtrunA17_Chr2g0313781 25.000 252 167 7 85 327 266 504 1.67e-15 77.8
Msa1336490 MtrunA17_Chr3g0104351 24.895 237 158 4 92 313 251 482 2.24e-15 77.4
Msa1336490 MtrunA17_Chr7g0227281 26.154 195 135 3 119 308 265 455 3.44e-15 76.6
Msa1336490 MtrunA17_Chr4g0004601 25.743 202 144 3 120 317 302 501 3.53e-15 76.6
Msa1336490 MtrunA17_Chr1g0163501 25.200 250 160 10 82 320 235 468 5.01e-15 76.3
Msa1336490 MtrunA17_Chr7g0248991 34.146 123 78 3 149 271 232 351 5.14e-15 75.5
Msa1336490 MtrunA17_Chr8g0354511 25.600 250 168 7 85 325 262 502 5.17e-15 76.3
Msa1336490 MtrunA17_Chr7g0235261 25.373 201 144 3 120 316 281 479 6.45e-15 75.9
Msa1336490 MtrunA17_Chr2g0293421 29.442 197 122 6 125 316 270 454 6.63e-15 75.9
Msa1336490 MtrunA17_Chr6g0472221 24.590 244 175 4 84 327 268 502 7.33e-15 75.9
Msa1336490 MtrunA17_Chr7g0215181 25.417 240 167 6 85 323 257 485 7.54e-15 75.5
Msa1336490 MtrunA17_Chr8g0354531 24.535 269 178 8 85 339 383 640 9.00e-15 75.5
Msa1336490 MtrunA17_Chr2g0307301 25.105 239 173 5 85 320 256 491 9.02e-15 75.5
Msa1336490 MtrunA17_Chr2g0313821 25.197 254 164 8 85 327 254 492 9.76e-15 75.5
Msa1336490 MtrunA17_Chr4g0056981 45.833 72 39 0 178 249 1 72 1.34e-14 68.2
Msa1336490 MtrunA17_Chr1g0163461 26.904 197 139 2 126 317 293 489 1.74e-14 74.7
Msa1336490 MtrunA17_Chr1g0151221 27.397 219 143 7 112 321 295 506 2.46e-14 73.9
Msa1336490 MtrunA17_Chr1g0163511 28.261 184 118 5 145 320 311 488 2.54e-14 73.9
Msa1336490 MtrunA17_Chr6g0472171 32.090 134 87 3 209 339 21 153 2.55e-14 70.1
Msa1336490 MtrunA17_Chr5g0400421 26.425 193 132 5 131 319 277 463 2.69e-14 73.9
Msa1336490 MtrunA17_Chr1g0182861 33.607 122 76 2 206 327 23 139 2.87e-14 70.1
Msa1336490 MtrunA17_Chr1g0163491 26.263 198 138 5 150 339 319 516 3.06e-14 73.9
Msa1336490 MtrunA17_Chr1g0204241 26.554 177 118 3 169 339 112 282 3.32e-14 72.4
Msa1336490 MtrunA17_Chr8g0348751 25.967 181 122 3 145 313 296 476 4.05e-14 73.6
Msa1336490 MtrunA17_Chr3g0128461 25.203 246 170 6 84 327 267 500 4.14e-14 73.6
Msa1336490 MtrunA17_Chr8g0362731 26.341 205 143 4 121 320 180 381 5.34e-14 72.8
Msa1336490 MtrunA17_Chr2g0313751 24.898 245 166 7 85 320 281 516 5.60e-14 73.2
Msa1336490 MtrunA17_Chr2g0313771 22.727 242 181 5 85 323 261 499 6.21e-14 72.8
Msa1336490 MtrunA17_Chr1g0163391 27.488 211 136 5 145 341 294 501 6.24e-14 72.8
Msa1336490 MtrunA17_Chr5g0403451 25.110 227 129 6 132 326 37 254 6.45e-14 71.2
Msa1336490 MtrunA17_Chr1g0163211 27.273 198 133 4 150 343 310 500 6.64e-14 72.8
Msa1336490 MtrunA17_Chr2g0313811 23.810 252 170 7 85 327 266 504 8.16e-14 72.4
Msa1336490 MtrunA17_Chr8g0354541 26.901 171 118 4 173 339 6 173 8.37e-14 68.9
Msa1336490 MtrunA17_Chr3g0135841 25.877 228 153 7 83 307 280 494 9.76e-14 72.4
Msa1336490 MtrunA17_Chr8g0387001 24.581 179 125 2 145 313 293 471 1.21e-13 72.0
Msa1336490 MtrunA17_Chr4g0067191 25.359 209 118 5 144 320 284 486 1.44e-13 71.6
Msa1336490 MtrunA17_Chr7g0225531 26.554 177 123 3 145 316 306 480 1.49e-13 71.6
Msa1336490 MtrunA17_Chr8g0364081 23.016 252 180 6 85 323 267 517 2.26e-13 71.2
Msa1336490 MtrunA17_Chr2g0313801 24.603 252 168 8 85 327 254 492 2.92e-13 70.9
Msa1336490 MtrunA17_Chr2g0321171 27.320 194 132 3 145 336 294 480 3.33e-13 70.5
Msa1336490 MtrunA17_Chr1g0163401 26.549 226 141 6 134 341 293 511 4.51e-13 70.1
Msa1336490 MtrunA17_Chr2g0313831 24.268 239 175 5 85 320 254 489 4.55e-13 70.1
Msa1336490 MtrunA17_Chr2g0313761 24.911 281 165 9 56 320 234 484 5.22e-13 70.1
Msa1336490 MtrunA17_Chr3g0119681 23.077 195 131 2 141 316 292 486 9.27e-13 69.3
Msa1336490 MtrunA17_Chr1g0163351 22.581 248 173 6 82 320 237 474 1.53e-12 68.6
Msa1336490 MtrunA17_Chr1g0171041 27.723 202 116 7 133 320 291 476 1.82e-12 68.2
Msa1336490 MtrunA17_Chr8g0372331 31.200 125 79 4 232 353 4 124 2.38e-12 63.5
Msa1336490 MtrunA17_Chr6g0478161 26.374 182 123 6 145 319 287 464 2.40e-12 67.8
Msa1336490 MtrunA17_Chr8g0364631 28.342 187 122 4 164 339 310 495 5.06e-12 67.0
Msa1336490 MtrunA17_Chr7g0262111 28.409 176 117 4 152 327 315 481 7.59e-12 66.2
Msa1336490 MtrunA17_Chr1g0178971 25.405 185 132 1 141 319 296 480 1.76e-11 65.5
Msa1336490 MtrunA17_Chr2g0328711 42.857 56 32 0 295 350 2 57 2.40e-11 58.5
Msa1336490 MtrunA17_Chr2g0308651 25.926 189 133 4 155 341 222 405 2.76e-11 64.3
Msa1336490 MtrunA17_Chr5g0446131 24.651 215 147 7 113 320 281 487 5.70e-11 63.9
Msa1336490 MtrunA17_Chr4g0014051 27.517 149 104 3 173 320 356 501 7.85e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1336490 AT4G36220.1 46.957 230 117 4 125 353 291 516 4.79e-70 228
Msa1336490 AT3G26210.1 39.236 288 164 5 72 352 217 500 1.69e-67 221
Msa1336490 AT3G26330.1 40.942 276 153 5 81 354 232 499 1.18e-66 219
Msa1336490 AT2G45570.1 43.590 234 124 3 116 349 280 505 7.35e-66 217
Msa1336490 AT3G26310.1 44.048 252 132 4 106 352 249 496 1.50e-65 216
Msa1336490 AT2G45550.1 42.797 236 127 3 114 349 277 504 4.58e-65 215
Msa1336490 AT1G01280.1 40.780 282 145 6 81 353 236 504 7.77e-65 214
Msa1336490 AT1G33720.4 40.964 249 139 2 101 349 132 372 8.76e-65 210
Msa1336490 AT1G33720.3 40.964 249 139 2 101 349 132 372 8.76e-65 210
Msa1336490 AT1G33720.5 40.964 249 139 2 101 349 132 372 8.76e-65 210
Msa1336490 AT3G26300.1 42.353 255 138 4 105 354 249 499 3.60e-64 212
Msa1336490 AT5G57260.1 41.912 272 150 6 81 349 231 497 4.56e-64 212
Msa1336490 AT3G48310.1 39.259 270 156 2 81 350 226 487 5.20e-64 211
Msa1336490 AT3G26160.1 40.293 273 151 6 81 349 234 498 6.82e-64 211
Msa1336490 AT2G45560.1 42.373 236 127 3 114 349 278 504 8.96e-64 211
Msa1336490 AT5G04330.1 41.219 279 153 7 82 353 231 505 1.05e-63 211
Msa1336490 AT1G33720.1 40.964 249 139 2 101 349 264 504 1.78e-63 211
Msa1336490 AT5G25140.1 39.033 269 157 3 81 349 229 490 4.36e-63 209
Msa1336490 AT3G26320.1 39.051 274 151 5 81 349 232 494 5.13e-63 209
Msa1336490 AT4G31500.1 38.321 274 158 3 81 350 230 496 6.68e-63 209
Msa1336490 AT5G07990.1 40.580 276 155 5 82 353 233 503 1.01e-62 209
Msa1336490 AT5G25180.1 38.662 269 158 4 81 349 229 490 1.22e-62 208
Msa1336490 AT3G48270.1 38.519 270 156 3 82 350 226 486 4.25e-62 206
Msa1336490 AT3G26270.1 40.741 270 152 5 81 349 235 497 4.30e-62 207
Msa1336490 AT3G48300.1 39.630 270 151 3 81 350 223 480 4.31e-62 206
Msa1336490 AT3G48300.2 39.630 270 151 3 81 350 225 482 4.51e-62 206
Msa1336490 AT5G25120.1 39.405 269 156 4 81 349 229 490 4.71e-62 206
Msa1336490 AT2G45580.2 41.991 231 128 3 119 349 127 351 4.98e-62 202
Msa1336490 AT3G48290.1 39.405 269 155 2 82 350 228 488 5.20e-61 203
Msa1336490 AT3G26150.1 40.370 270 155 5 81 349 234 498 8.62e-61 203
Msa1336490 AT2G45580.1 41.991 231 128 3 119 349 281 505 1.17e-60 203
Msa1336490 AT3G26230.1 41.971 274 147 7 81 349 228 494 1.84e-60 202
Msa1336490 AT2G24180.1 38.686 274 158 4 81 354 237 500 1.88e-60 202
Msa1336490 AT3G61040.1 41.909 241 131 4 110 349 261 493 3.12e-60 202
Msa1336490 AT4G13310.1 40.278 288 153 6 65 350 225 495 7.88e-60 201
Msa1336490 AT3G26280.1 40.860 279 150 7 81 354 235 503 2.26e-59 199
Msa1336490 AT1G33720.2 44.724 199 109 1 151 349 200 397 2.91e-59 197
Msa1336490 AT3G26280.2 40.860 279 150 7 81 354 252 520 2.95e-59 200
Msa1336490 AT3G26180.2 37.778 270 156 6 84 349 103 364 3.27e-59 196
Msa1336490 AT1G13110.1 36.296 270 168 4 81 349 234 500 4.12e-59 199
Msa1336490 AT5G24950.1 38.889 270 157 3 82 350 232 494 4.83e-59 199
Msa1336490 AT1G33730.1 37.363 273 155 3 83 347 102 366 7.28e-59 194
Msa1336490 AT1G33730.2 37.363 273 155 3 83 347 102 366 7.28e-59 194
Msa1336490 AT3G48280.1 36.059 269 165 2 82 350 225 486 1.02e-58 197
Msa1336490 AT2G02580.1 41.697 271 148 5 81 349 232 494 1.78e-58 197
Msa1336490 AT4G13770.1 36.996 273 161 3 81 349 231 496 1.92e-58 197
Msa1336490 AT4G13290.1 39.100 289 147 6 65 350 226 488 2.13e-58 197
Msa1336490 AT3G26290.1 41.241 274 155 3 81 354 232 499 1.38e-57 195
Msa1336490 AT3G26290.2 41.241 274 155 3 81 354 245 512 2.30e-57 194
Msa1336490 AT1G13080.2 35.688 269 166 4 85 352 121 383 3.17e-57 191
Msa1336490 AT3G26180.1 36.996 273 160 6 81 349 234 498 9.96e-57 192
Msa1336490 AT3G20120.2 40.370 270 140 7 90 352 115 370 1.65e-56 189
Msa1336490 AT3G20120.3 40.370 270 140 7 90 352 115 370 1.65e-56 189
Msa1336490 AT3G20120.1 40.370 270 140 7 90 352 115 370 1.65e-56 189
Msa1336490 AT2G30770.1 35.766 274 167 3 78 350 229 494 2.65e-56 191
Msa1336490 AT3G48320.1 38.148 270 159 2 81 350 226 487 3.85e-56 191
Msa1336490 AT1G13080.1 35.688 269 166 4 85 352 239 501 5.69e-56 191
Msa1336490 AT3G26170.1 36.264 273 162 6 81 349 234 498 1.27e-55 189
Msa1336490 AT3G48290.2 35.932 295 155 3 82 350 228 514 1.95e-55 189
Msa1336490 AT5G25130.1 37.918 269 160 3 81 349 229 490 1.97e-55 189
Msa1336490 AT2G30750.1 38.745 271 157 3 81 350 232 494 2.23e-55 189
Msa1336490 AT3G20120.4 40.370 270 140 7 90 352 251 506 5.73e-55 188
Msa1336490 AT2G14100.1 37.956 274 154 7 90 359 253 514 5.87e-55 188
Msa1336490 AT5G06900.1 39.552 268 148 6 82 349 236 489 9.47e-55 187
Msa1336490 AT1G11610.2 36.131 274 166 3 81 353 232 497 2.44e-54 186
Msa1336490 AT1G11610.1 36.900 271 162 3 81 350 232 494 4.96e-54 185
Msa1336490 AT1G50560.1 39.209 278 148 7 89 359 255 518 5.59e-54 186
Msa1336490 AT2G40890.1 37.692 260 151 3 95 353 247 496 6.96e-54 185
Msa1336490 AT4G22710.1 35.379 277 168 4 82 357 256 522 1.01e-53 185
Msa1336490 AT5G44620.1 35.842 279 162 6 82 355 248 514 1.08e-53 185
Msa1336490 AT4G22690.1 35.379 277 168 4 82 357 287 553 1.61e-53 185
Msa1336490 AT1G13090.2 36.555 238 144 5 85 321 235 466 5.91e-53 182
Msa1336490 AT4G12300.1 35.870 276 169 4 82 356 244 512 5.95e-53 183
Msa1336490 AT5G35715.1 40.000 205 121 2 147 350 231 434 9.27e-53 181
Msa1336490 AT4G31940.1 37.943 282 160 6 81 355 247 520 2.03e-52 182
Msa1336490 AT4G12320.1 33.803 284 168 6 81 356 243 514 3.33e-52 181
Msa1336490 AT3G26190.1 41.026 234 133 4 117 349 266 495 1.13e-51 179
Msa1336490 AT3G26220.1 40.221 271 156 4 81 349 231 497 1.76e-51 179
Msa1336490 AT3G20950.1 37.676 284 151 9 79 352 245 512 2.74e-51 179
Msa1336490 AT3G32047.1 40.486 247 131 7 90 333 252 485 2.96e-51 178
Msa1336490 AT3G20140.1 36.735 294 170 9 61 352 225 504 3.54e-51 178
Msa1336490 AT1G66540.2 39.552 268 144 7 85 352 67 316 5.06e-51 173
Msa1336490 AT3G28740.1 40.824 267 136 9 88 352 251 497 6.55e-51 177
Msa1336490 AT3G26830.1 36.187 257 156 6 81 335 231 481 1.35e-50 176
Msa1336490 AT4G31970.1 36.268 284 168 5 81 358 246 522 1.79e-50 176
Msa1336490 AT5G24960.1 40.590 271 151 4 82 350 233 495 1.81e-50 176
Msa1336490 AT4G12310.1 33.574 277 178 4 81 356 245 516 2.16e-50 176
Msa1336490 AT1G66540.1 39.552 268 144 7 85 352 126 375 2.50e-50 173
Msa1336490 AT1G50520.1 36.264 273 153 7 89 354 254 512 5.87e-50 175
Msa1336490 AT2G42250.1 37.450 251 139 6 112 354 272 512 6.48e-50 175
Msa1336490 AT5G47990.1 36.749 283 154 7 79 352 241 507 1.09e-49 174
Msa1336490 AT3G20940.1 37.500 272 147 8 90 352 252 509 1.88e-49 174
Msa1336490 AT4G31950.1 38.929 280 156 6 81 353 235 506 2.02e-49 173
Msa1336490 AT3G25180.1 36.059 269 162 4 88 354 248 508 4.40e-49 172
Msa1336490 AT3G20935.1 35.786 299 158 9 79 352 45 334 5.84e-49 168
Msa1336490 AT3G26200.1 38.723 235 139 3 117 350 266 496 7.21e-49 172
Msa1336490 AT5G36220.2 37.970 266 146 5 87 352 102 348 1.21e-48 167
Msa1336490 AT4G12330.1 34.173 278 164 6 82 355 251 513 1.93e-48 171
Msa1336490 AT3G53300.1 40.465 215 126 2 137 350 283 496 2.76e-48 170
Msa1336490 AT4G37400.1 35.766 274 160 6 80 352 231 489 3.23e-48 170
Msa1336490 AT4G37430.1 35.294 272 154 7 80 348 236 488 3.34e-48 170
Msa1336490 AT4G37310.1 37.079 267 153 7 82 345 239 493 3.66e-48 170
Msa1336490 AT1G74550.1 39.810 211 122 3 144 353 275 481 7.73e-48 169
Msa1336490 AT1G28430.1 37.594 266 145 8 79 337 239 490 8.35e-48 169
Msa1336490 AT3G20090.1 36.759 253 141 7 90 336 115 354 1.11e-47 166
Msa1336490 AT5G36220.1 38.113 265 145 5 88 352 249 494 1.43e-47 168
Msa1336490 AT1G13100.1 33.884 242 156 3 81 321 228 466 1.44e-47 168
Msa1336490 AT3G20080.4 37.175 269 152 7 90 352 115 372 1.86e-47 165
Msa1336490 AT3G20080.5 37.175 269 152 7 90 352 115 372 1.86e-47 165
Msa1336490 AT3G20080.6 37.175 269 152 7 90 352 115 372 1.86e-47 165
Msa1336490 AT3G20080.3 37.175 269 152 7 90 352 115 372 1.86e-47 165
Msa1336490 AT5G67310.1 35.581 267 156 6 81 347 244 494 4.29e-47 167
Msa1336490 AT3G20080.2 37.175 269 152 7 90 352 252 509 8.96e-47 166
Msa1336490 AT3G20080.1 37.175 269 152 7 90 352 252 509 8.96e-47 166
Msa1336490 AT3G20090.2 36.759 253 141 7 90 336 253 492 9.69e-47 166
Msa1336490 AT4G15330.2 37.638 271 139 9 90 349 220 471 1.52e-46 165
Msa1336490 AT3G53280.1 33.210 271 175 5 81 350 229 494 1.68e-46 165
Msa1336490 AT5G57220.1 35.688 269 153 5 80 348 231 479 2.10e-46 165
Msa1336490 AT4G15360.1 36.691 278 143 9 90 354 250 507 2.13e-46 166
Msa1336490 AT4G37340.1 37.363 273 152 8 81 352 235 489 2.71e-46 165
Msa1336490 AT3G20110.1 38.224 259 146 7 90 348 249 493 2.98e-46 165
Msa1336490 AT4G15330.1 37.638 271 139 9 90 349 248 499 3.19e-46 165
Msa1336490 AT5G42590.1 36.364 264 161 3 88 350 238 495 4.07e-46 164
Msa1336490 AT3G20960.1 37.828 267 146 8 90 349 148 401 5.23e-46 162
Msa1336490 AT4G37360.1 36.013 311 170 9 53 352 196 488 5.73e-46 164
Msa1336490 AT3G20130.2 36.264 273 148 9 90 352 224 480 7.37e-46 163
Msa1336490 AT5G42580.1 35.052 291 167 8 72 354 219 495 8.93e-46 163
Msa1336490 AT1G01190.1 37.349 249 135 6 87 330 279 511 1.05e-45 164
Msa1336490 AT4G37320.1 36.226 265 150 7 88 352 243 488 1.06e-45 163
Msa1336490 AT4G15350.1 37.023 262 145 7 90 344 245 493 1.14e-45 163
Msa1336490 AT1G01190.2 37.349 249 135 6 87 330 284 516 1.17e-45 164
Msa1336490 AT3G20130.1 36.364 264 143 8 90 344 252 499 1.37e-45 163
Msa1336490 AT3G20100.1 36.296 270 155 7 90 353 251 509 1.50e-45 163
Msa1336490 AT4G15380.1 31.287 342 206 8 33 356 178 508 1.86e-45 163
Msa1336490 AT4G37410.1 36.201 279 150 7 80 352 233 489 2.15e-45 162
Msa1336490 AT4G37370.1 36.842 266 148 8 87 352 241 486 3.10e-45 162
Msa1336490 AT5G06905.1 35.099 302 159 13 40 318 190 477 3.31e-45 162
Msa1336490 AT2G25160.1 35.461 282 165 8 85 359 248 519 3.52e-45 162
Msa1336490 AT3G20960.2 37.828 267 146 8 90 349 251 504 4.74e-45 162
Msa1336490 AT3G44250.1 38.496 226 134 3 117 341 265 486 7.62e-45 161
Msa1336490 AT2G27000.1 37.302 252 142 6 90 336 249 489 1.65e-44 160
Msa1336490 AT4G37330.1 41.827 208 112 4 145 352 287 485 3.99e-44 159
Msa1336490 AT3G61880.1 37.175 269 144 8 87 347 273 524 5.69e-44 159
Msa1336490 AT1G74540.1 39.175 194 115 2 144 337 281 471 6.74e-44 158
Msa1336490 AT3G52970.1 38.430 242 141 6 116 352 276 514 7.14e-44 159
Msa1336490 AT3G61880.2 37.175 269 144 8 87 347 273 524 7.45e-44 159
Msa1336490 AT5G10610.1 35.036 274 157 7 79 349 232 487 9.82e-44 158
Msa1336490 AT3G52970.2 38.235 238 140 5 116 349 290 524 9.92e-44 158
Msa1336490 AT2G27010.1 35.448 268 151 8 86 347 228 479 1.57e-43 157
Msa1336490 AT2G46660.1 36.264 273 148 8 83 347 269 523 6.42e-43 156
Msa1336490 AT5G10600.1 33.824 272 161 5 79 348 248 502 1.01e-41 153
Msa1336490 AT2G23190.1 36.134 238 130 6 85 319 284 502 1.48e-39 147
Msa1336490 AT1G74110.1 34.397 282 156 10 82 349 269 535 3.96e-39 146
Msa1336490 AT2G23220.1 35.745 235 135 5 85 319 255 473 8.99e-39 145
Msa1336490 AT5G09970.1 39.592 245 126 9 83 318 273 504 1.59e-38 144
Msa1336490 AT1G13710.1 32.653 245 143 6 82 318 252 482 1.88e-37 141
Msa1336490 AT2G30490.1 41.176 187 107 2 132 316 283 468 3.12e-37 140
Msa1336490 AT1G16400.1 30.942 223 140 4 116 333 295 508 1.60e-34 133
Msa1336490 AT1G16410.1 27.961 304 194 8 57 349 237 526 2.27e-34 133
Msa1336490 AT4G39950.2 29.960 247 162 5 81 323 306 545 4.17e-34 132
Msa1336490 AT4G39950.1 31.905 210 134 4 116 323 303 505 5.04e-34 132
Msa1336490 AT2G05180.1 40.984 183 101 4 90 272 251 426 7.84e-34 130
Msa1336490 AT1G58260.1 30.909 220 139 5 116 329 287 499 2.24e-33 130
Msa1336490 AT5G05260.2 32.692 208 131 4 113 318 290 490 5.74e-33 129
Msa1336490 AT5G05260.1 33.854 192 122 3 129 318 270 458 1.14e-32 127
Msa1336490 AT4G20240.1 35.859 198 119 3 81 278 232 421 1.54e-32 127
Msa1336490 AT2G22330.2 29.918 244 160 5 81 320 291 527 1.64e-32 128
Msa1336490 AT2G22330.1 29.918 244 160 5 81 320 268 504 1.80e-32 127
Msa1336490 AT3G53290.1 43.125 160 90 1 191 350 245 403 4.85e-32 124
Msa1336490 AT1G79370.1 34.300 207 128 4 116 321 304 503 1.56e-31 125
Msa1336490 AT1G64940.1 29.119 261 173 6 96 348 248 504 3.09e-30 121
Msa1336490 AT3G53305.1 37.368 190 97 5 167 350 152 325 2.06e-29 116
Msa1336490 AT1G64930.1 31.092 238 148 7 116 348 278 504 4.38e-28 115
Msa1336490 AT5G04660.1 36.527 167 102 3 155 318 314 479 1.71e-27 113
Msa1336490 AT5G04630.1 34.884 172 98 3 155 318 311 476 6.75e-27 111
Msa1336490 AT4G13310.2 38.674 181 96 4 65 245 225 390 2.42e-26 108
Msa1336490 AT1G11600.1 30.182 275 168 9 92 347 235 504 1.04e-25 108
Msa1336490 AT3G10560.1 35.928 167 102 4 155 318 316 480 2.63e-25 107
Msa1336490 AT3G10570.1 32.323 198 125 6 155 348 316 508 2.72e-25 107
Msa1336490 AT1G64950.1 29.858 211 142 4 140 348 297 503 3.56e-25 106
Msa1336490 AT2G12190.1 30.415 217 143 5 140 352 297 509 9.72e-25 105
Msa1336490 AT1G65340.1 28.862 246 160 6 80 317 235 473 1.04e-24 105
Msa1336490 AT3G03470.1 29.384 211 139 4 118 319 269 478 1.51e-24 105
Msa1336490 AT5G25900.1 27.619 210 146 3 139 348 300 503 4.58e-23 100
Msa1336490 AT5G52320.2 26.939 245 165 6 80 317 235 472 7.95e-23 99.8
Msa1336490 AT3G61040.2 39.007 141 78 3 110 249 261 394 8.78e-23 99.0
Msa1336490 AT5G52320.1 26.939 245 165 6 80 317 235 472 1.06e-22 99.4
Msa1336490 AT4G20240.2 35.928 167 99 3 81 247 232 390 8.64e-22 95.9
Msa1336490 AT1G31800.1 30.000 210 136 5 149 350 371 577 3.97e-21 95.1
Msa1336490 AT1G57750.1 25.984 254 171 8 80 326 234 477 2.64e-20 92.4
Msa1336490 AT2G44890.1 27.442 215 144 2 145 349 295 507 2.89e-20 92.4
Msa1336490 AT3G53130.1 31.609 174 115 4 149 320 341 512 4.48e-20 92.0
Msa1336490 AT2G25160.2 35.000 140 86 3 85 223 248 383 5.10e-20 91.3
Msa1336490 AT2G45510.1 26.977 215 145 2 145 349 295 507 6.57e-20 91.3
Msa1336490 AT3G56630.1 30.435 184 121 4 145 321 288 471 8.69e-20 90.9
Msa1336490 AT4G20235.1 38.168 131 66 2 190 318 211 328 1.25e-19 89.0
Msa1336490 AT5G61320.1 27.679 224 137 6 140 358 290 493 2.09e-19 89.7
Msa1336490 AT3G26125.1 24.354 271 173 5 60 313 243 498 2.26e-19 89.7
Msa1336490 AT1G16410.2 30.159 189 114 5 57 239 237 413 6.58e-19 87.8
Msa1336490 AT1G64900.1 29.289 239 157 7 115 348 268 499 8.88e-19 87.8
Msa1336490 AT2G45580.3 37.008 127 75 2 119 245 281 402 1.62e-18 86.7
Msa1336490 AT5G35917.1 31.953 169 91 7 113 279 294 440 1.86e-18 87.0
Msa1336490 AT5G02900.1 25.967 181 130 2 141 317 268 448 2.24e-18 86.7
Msa1336490 AT5G24960.2 39.098 133 71 4 82 212 233 357 2.39e-18 85.9
Msa1336490 AT1G34540.1 28.646 192 130 4 145 329 288 479 5.23e-18 85.5
Msa1336490 AT2G44890.2 26.512 215 132 3 145 349 291 489 7.46e-18 85.1
Msa1336490 AT1G13150.1 26.699 206 136 4 152 342 313 518 2.02e-17 84.0
Msa1336490 AT1G13140.1 25.403 248 160 7 81 313 253 490 2.04e-17 84.0
Msa1336490 AT1G24540.1 26.267 217 143 5 112 313 272 486 2.08e-17 84.0
Msa1336490 AT1G13140.2 27.907 172 113 3 152 313 294 464 2.97e-17 83.2
Msa1336490 AT4G39490.1 25.389 193 128 3 141 319 296 486 3.07e-17 83.2
Msa1336490 AT4G39500.1 27.684 177 127 1 141 316 259 435 3.53e-17 82.8
Msa1336490 AT2G21910.1 26.022 269 183 8 78 339 242 501 4.20e-17 82.8
Msa1336490 AT4G39500.2 28.000 175 125 1 141 314 309 483 4.86e-17 82.8
Msa1336490 AT5G24900.2 27.642 246 161 8 103 339 168 405 5.11e-17 82.0
Msa1336490 AT5G24900.1 27.642 246 161 8 103 339 285 522 5.59e-17 82.4
Msa1336490 AT5G24910.1 25.185 270 180 8 64 327 255 508 8.56e-17 82.0
Msa1336490 AT3G25180.2 34.307 137 84 2 88 222 248 380 1.83e-16 80.5
Msa1336490 AT1G19630.1 29.060 234 139 8 94 319 233 447 3.60e-16 80.1
Msa1336490 AT2G32440.2 27.586 261 165 9 61 316 212 453 3.72e-16 80.1
Msa1336490 AT2G32440.1 27.586 261 165 9 61 316 212 453 3.72e-16 80.1
Msa1336490 AT1G57750.2 27.411 197 129 6 80 272 234 420 4.22e-16 79.7
Msa1336490 AT2G23180.1 22.619 252 177 7 108 345 268 515 5.84e-16 79.3
Msa1336490 AT1G05160.2 27.509 269 157 11 61 316 213 456 1.06e-15 78.6
Msa1336490 AT1G05160.1 27.509 269 157 11 61 316 213 456 1.06e-15 78.6
Msa1336490 AT4G39510.1 25.698 179 131 2 141 317 297 475 1.41e-15 78.2
Msa1336490 AT1G01600.1 25.397 252 161 5 80 313 237 479 2.25e-15 77.8
Msa1336490 AT3G14620.1 22.179 257 180 5 88 336 263 507 2.35e-15 77.8
Msa1336490 AT2G26710.1 25.112 223 149 4 112 318 266 486 3.18e-15 77.4
Msa1336490 AT1G63710.1 26.257 179 122 2 145 313 295 473 6.56e-15 76.3
Msa1336490 AT4G39480.1 21.555 283 197 6 80 341 234 512 6.85e-15 76.3
Msa1336490 AT4G32170.1 26.901 171 123 2 149 317 303 473 9.77e-15 75.9
Msa1336490 AT1G19630.3 30.303 231 130 9 94 316 233 440 1.05e-14 75.5
Msa1336490 AT5G52400.1 27.326 172 109 4 152 316 326 488 1.33e-14 75.5
Msa1336490 AT4G00360.1 25.506 247 155 7 83 313 244 477 1.97e-14 74.7
Msa1336490 AT1G47620.1 23.016 252 170 6 80 316 242 484 4.24e-14 73.9
Msa1336490 AT5G23190.1 22.711 273 192 6 82 339 267 535 8.39e-14 72.8
Msa1336490 AT2G45970.1 24.590 244 160 6 83 313 244 476 8.83e-14 72.8
Msa1336490 AT5G35920.1 28.395 162 96 5 200 354 1 149 3.75e-13 67.0
Msa1336490 AT2G27690.1 23.889 180 133 2 141 316 281 460 4.78e-13 70.5
Msa1336490 AT3G14610.1 24.138 261 181 7 85 341 255 502 6.17e-13 70.1
Msa1336490 AT5G08250.1 22.464 276 192 6 82 339 202 473 8.35e-13 69.7
Msa1336490 AT5G08250.2 22.464 276 192 6 82 339 264 535 1.08e-12 69.7
Msa1336490 AT2G46960.2 22.989 261 177 8 89 339 266 512 1.25e-12 69.3
Msa1336490 AT2G46960.1 22.989 261 177 8 89 339 150 396 1.40e-12 68.9
Msa1336490 AT3G14650.1 27.011 174 113 5 158 327 325 488 1.57e-11 65.9
Msa1336490 AT4G27710.1 25.654 191 132 5 155 339 326 512 1.96e-11 65.5
Msa1336490 AT1G69500.1 24.424 217 129 5 125 310 274 486 2.11e-11 65.5
Msa1336490 AT5G38450.1 27.219 169 116 4 174 339 347 511 2.25e-11 65.5
Msa1336490 AT3G14680.1 24.900 249 165 9 85 327 256 488 2.29e-11 65.5
Msa1336490 AT1G19630.2 29.730 185 110 6 94 271 233 404 4.26e-11 64.3
Msa1336490 AT4G19230.1 24.427 262 170 9 61 318 197 434 5.41e-11 64.3
Msa1336490 AT5G45340.1 23.897 272 176 9 61 328 197 441 5.57e-11 63.9
Msa1336490 AT5G14400.2 26.141 241 131 10 80 314 182 381 5.67e-11 63.9
Msa1336490 AT5G14400.3 26.141 241 131 10 80 314 182 381 5.68e-11 63.9
Msa1336490 AT5G14400.1 26.141 241 131 10 80 314 128 327 6.21e-11 63.5
Msa1336490 AT5G63450.1 23.276 232 155 5 99 316 249 471 8.01e-11 63.5

Find 77 sgRNAs with CRISPR-Local

Find 290 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTTATGCATTGCTTTAAT+TGG 0.069869 tig0001216:-10281 Msa1336490:CDS
TTGAATATGGAGGAGAAATT+TGG 0.193780 tig0001216:-10228 Msa1336490:CDS
CTGCCTATCGATGTTGAATC+TGG 0.218059 tig0001216:+11825 Msa1336490:intergenic
TTGAGGCTAAAATATGATTT+TGG 0.269710 tig0001216:+11141 Msa1336490:intergenic
TAGTCCTTCTGATTTGAATA+TGG 0.290544 tig0001216:-10241 Msa1336490:CDS
AATGATGTTCGTATAAAATA+AGG 0.293147 tig0001216:-10074 Msa1336490:three_prime_UTR
ATAGTAAATGCATGGGCAAT+AGG 0.326964 tig0001216:-10477 Msa1336490:CDS
GAATCTATACCATTTGGTTC+TGG 0.339971 tig0001216:-10363 Msa1336490:CDS
TGGTCGGTGGGCGATGGTGG+TGG 0.364048 tig0001216:+11915 Msa1336490:intergenic
CACCCTCCACATCAATGGTT+TGG 0.381062 tig0001216:+10832 Msa1336490:intergenic
ACGTTGTCCTGGAATTCAAC+TGG 0.381839 tig0001216:-10334 Msa1336490:CDS
TGGTGGTCGGTGGGCGATGG+TGG 0.387603 tig0001216:+11912 Msa1336490:intergenic
ATTTATGCATTGCTTTAATT+GGG 0.391904 tig0001216:-10280 Msa1336490:CDS
ATTAAACCCAGTTGAATTCC+AGG 0.406747 tig0001216:+10327 Msa1336490:intergenic
TGCTACTGGGTGAAGTCTTA+AGG 0.413199 tig0001216:+10575 Msa1336490:intergenic
TGGTGGTGGTCGGTGGGCGA+TGG 0.428610 tig0001216:+11909 Msa1336490:intergenic
TAGGGAGAGATTGTAATGTT+TGG 0.431904 tig0001216:-10458 Msa1336490:CDS
CATCTGCTACCTCAATTGAA+TGG 0.445750 tig0001216:-10737 Msa1336490:CDS
TTGTTCACCCTCCACATCAA+TGG 0.453013 tig0001216:+10827 Msa1336490:intergenic
AGGACTAGTAACGGTGCTAC+TGG 0.458462 tig0001216:+10561 Msa1336490:intergenic
GGGTTTAATTACTGTTAAGT+TGG 0.458906 tig0001216:-10313 Msa1336490:CDS
GCATGCAAATGTTGAGCTCT+TGG 0.468375 tig0001216:+10195 Msa1336490:intergenic
ATCTGCTACCTCAATTGAAT+GGG 0.471684 tig0001216:-10736 Msa1336490:CDS
AGAGGGAGCACAACAATTGA+TGG 0.474959 tig0001216:-10528 Msa1336490:CDS
TTAGCCTCAACTATATTCAC+AGG 0.479471 tig0001216:-11128 Msa1336490:CDS
TAGTAAATGCATGGGCAATA+GGG 0.480030 tig0001216:-10476 Msa1336490:CDS
TCGGTGGGCGATGGTGGTGG+TGG 0.487467 tig0001216:+11918 Msa1336490:intergenic
ATTATTAGACCTAATATACT+TGG 0.487737 tig0001216:+10094 Msa1336490:intergenic
ATTACATTGACCACCATGTC+CGG 0.490744 tig0001216:+9998 Msa1336490:intergenic
AGATTCTGAATTTGTGATGG+TGG 0.499810 tig0001216:+11892 Msa1336490:intergenic
TAAAAGAATGGTTGACGAGA+AGG 0.500216 tig0001216:-10640 Msa1336490:CDS
AAAGCCATGGCATCAAGTCT+TGG 0.508188 tig0001216:-11969 None:intergenic
GCTATGAGTTCTAGTCATGA+AGG 0.517957 tig0001216:-11105 Msa1336490:CDS
TCTGGTCGTAGACGTTGTCC+TGG 0.524631 tig0001216:-10345 Msa1336490:CDS
AGATAAAGCCCATTCAATTG+AGG 0.525422 tig0001216:+10728 Msa1336490:intergenic
GATGAGATACAAAATGAAGT+AGG 0.525470 tig0001216:-10666 Msa1336490:CDS
CGTTGTCCTGGAATTCAACT+GGG 0.526919 tig0001216:-10333 Msa1336490:CDS
TCAGAAGGACTAATATTATG+TGG 0.527996 tig0001216:+10252 None:intergenic
TGCCTATCGATGTTGAATCT+GGG 0.531647 tig0001216:+11826 None:intergenic
TTGTGATGGTGGTGGTCGGT+GGG 0.532524 tig0001216:+11903 None:intergenic
ATTTGAGTCTCCACCGGACA+TGG 0.533659 tig0001216:-10011 None:intergenic
ATTGATATTTGAGTCTCCAC+CGG 0.538898 tig0001216:-10017 Msa1336490:three_prime_UTR
CACGACTTATAGTAAATGCA+TGG 0.539052 tig0001216:-10485 Msa1336490:CDS
TCCTCCATATTCAAATCAGA+AGG 0.545525 tig0001216:+10237 Msa1336490:intergenic
CGTCTACGACCAGAACCAAA+TGG 0.545982 tig0001216:+10354 Msa1336490:intergenic
TGAAGTAGGAAATAAAAGAA+TGG 0.548804 tig0001216:-10652 Msa1336490:CDS
TTCTCCAAGACTTGATGCCA+TGG 0.550507 tig0001216:+11965 Msa1336490:intergenic
TTTGTGATGGTGGTGGTCGG+TGG 0.560598 tig0001216:+11902 Msa1336490:intergenic
GTTAAATTATTTAGACATGG+TGG 0.566163 tig0001216:-10607 Msa1336490:CDS
TTCTGAATTTGTGATGGTGG+TGG 0.566230 tig0001216:+11895 Msa1336490:intergenic
TCCTTCTGATTTGAATATGG+AGG 0.566516 tig0001216:-10238 Msa1336490:CDS
TTGAGATTCTGAATTTGTGA+TGG 0.572792 tig0001216:+11889 Msa1336490:intergenic
CTAGTCCTTCATGAATCTAG+AGG 0.574376 tig0001216:-10546 Msa1336490:CDS
CTATGAGTTCTAGTCATGAA+GGG 0.575945 tig0001216:-11104 Msa1336490:CDS
GAATTTGTGATGGTGGTGGT+CGG 0.577891 tig0001216:+11899 Msa1336490:intergenic
TGCTCCCTCTAGATTCATGA+AGG 0.582040 tig0001216:+10541 Msa1336490:intergenic
GGACTAGTAACGGTGCTACT+GGG 0.583188 tig0001216:+10562 Msa1336490:intergenic
CATTGATCGAACTAACATCA+AGG 0.583673 tig0001216:-10796 Msa1336490:CDS
GATTCAACATCGATAGGCAG+AGG 0.588196 tig0001216:-11822 Msa1336490:CDS
GAAGTTAAATTATTTAGACA+TGG 0.595434 tig0001216:-10610 Msa1336490:CDS
GATTCATGAAGGACTAGTAA+CGG 0.602864 tig0001216:+10552 Msa1336490:intergenic
GCATCATTCAAACGATAACT+CGG 0.613395 tig0001216:+10168 Msa1336490:intergenic
AACCCAGATTCAACATCGAT+AGG 0.615062 tig0001216:-11828 Msa1336490:CDS
AGCAATTGATGAGGTGCTAG+AGG 0.622173 tig0001216:-10937 Msa1336490:CDS
TAGCCTCAACTATATTCACA+GGG 0.624014 tig0001216:-11127 Msa1336490:CDS
TAGTCCTTCATGAATCTAGA+GGG 0.625482 tig0001216:-10545 Msa1336490:CDS
TAGCCCTGTGAATATAGTTG+AGG 0.629391 tig0001216:+11124 Msa1336490:intergenic
TATGCACCAAACCATTGATG+TGG 0.632106 tig0001216:-10838 Msa1336490:CDS
TATGAGTTCTAGTCATGAAG+GGG 0.640164 tig0001216:-11103 Msa1336490:CDS
ACGACTTATAGTAAATGCAT+GGG 0.645877 tig0001216:-10484 Msa1336490:CDS
CACCAAACCATTGATGTGGA+GGG 0.645897 tig0001216:-10834 Msa1336490:CDS
ATTCAACATCGATAGGCAGA+GGG 0.655388 tig0001216:-11821 Msa1336490:CDS
GCACCAAACCATTGATGTGG+AGG 0.655501 tig0001216:-10835 Msa1336490:CDS
AGTCAGTAAAGCAATTGATG+AGG 0.660893 tig0001216:-10946 Msa1336490:CDS
ACATTGACCACCATGTCCGG+TGG 0.670682 tig0001216:+10001 Msa1336490:intergenic
AATAAGCTTGAACAAGAACA+AGG 0.681356 tig0001216:+10130 Msa1336490:intergenic
ATGAGTTCTAGTCATGAAGG+GGG 0.706050 tig0001216:-11102 Msa1336490:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATATTTAATTAAAAAA+GGG + tig0001216:10568-10587 Msa1336490:intergenic 0.0%
!! AAAAAATATTTAATTAAAAA+AGG + tig0001216:10569-10588 Msa1336490:intergenic 0.0%
!! AAAAATATTTAATTAAAAAA+GGG + tig0001216:10568-10587 Msa1336490:intergenic 0.0%
!! AAAAAATATTTAATTAAAAA+AGG + tig0001216:10569-10588 Msa1336490:intergenic 0.0%
!!! CAATTTTTGTTGATTTTTTT+GGG + tig0001216:10424-10443 Msa1336490:intergenic 15.0%
!! CAAAAAAATCAACAAAAATT+GGG - tig0001216:10423-10442 Msa1336490:CDS 15.0%
!!! TAAAAAACAAAAAATTTTGC+AGG - tig0001216:10750-10769 Msa1336490:CDS 15.0%
!!! AAAAAACAAAAAATTTTGCA+GGG - tig0001216:10751-10770 Msa1336490:CDS 15.0%
!!! TTTCAAAAGTTTTTTTTTAC+AGG - tig0001216:10779-10798 Msa1336490:CDS 15.0%
!!! AATTGATGGTTATTTTATAA+AGG - tig0001216:11462-11481 Msa1336490:intron 15.0%
!!! CAATTTTTGTTGATTTTTTT+GGG + tig0001216:10424-10443 Msa1336490:intergenic 15.0%
!! CAAAAAAATCAACAAAAATT+GGG - tig0001216:10423-10442 Msa1336490:CDS 15.0%
!!! TAAAAAACAAAAAATTTTGC+AGG - tig0001216:10750-10769 Msa1336490:CDS 15.0%
!!! AAAAAACAAAAAATTTTGCA+GGG - tig0001216:10751-10770 Msa1336490:CDS 15.0%
!!! TTTCAAAAGTTTTTTTTTAC+AGG - tig0001216:10779-10798 Msa1336490:CDS 15.0%
!!! AATTGATGGTTATTTTATAA+AGG - tig0001216:11462-11481 Msa1336490:intron 15.0%
!! TGTTTAGAGATTAATAAAGA+TGG - tig0001216:10231-10250 Msa1336490:CDS 20.0%
!! GTTTAGAGATTAATAAAGAT+GGG - tig0001216:10232-10251 Msa1336490:CDS 20.0%
!!! CCAATTTTTGTTGATTTTTT+TGG + tig0001216:10425-10444 Msa1336490:intergenic 20.0%
!! CCAAAAAAATCAACAAAAAT+TGG - tig0001216:10422-10441 Msa1336490:CDS 20.0%
!! TATTTAATTAAAAAAGGGGA+AGG + tig0001216:10563-10582 Msa1336490:intergenic 20.0%
!! TTTAAAAAAACATGCTCTAA+TGG - tig0001216:10919-10938 Msa1336490:CDS 20.0%
!!! TTATGTTTTAACTCATTGTT+AGG - tig0001216:10985-11004 Msa1336490:intron 20.0%
!!! TATGTTTTAACTCATTGTTA+GGG - tig0001216:10986-11005 Msa1336490:intron 20.0%
!! GAAGTTAAATTATTTAGACA+TGG - tig0001216:11366-11385 Msa1336490:intron 20.0%
!! GAGAAAAAAATGAATTATCT+CGG - tig0001216:11580-11599 Msa1336490:intron 20.0%
!! AATTTATGCATTGCTTTAAT+TGG - tig0001216:11695-11714 Msa1336490:intron 20.0%
!! ATTTATGCATTGCTTTAATT+GGG - tig0001216:11696-11715 Msa1336490:intron 20.0%
!! ATTATTAGACCTAATATACT+TGG + tig0001216:11885-11904 Msa1336490:intergenic 20.0%
!! AATGATGTTCGTATAAAATA+AGG - tig0001216:11902-11921 Msa1336490:CDS 20.0%
!! TGTTTAGAGATTAATAAAGA+TGG - tig0001216:10231-10250 Msa1336490:CDS 20.0%
!! GTTTAGAGATTAATAAAGAT+GGG - tig0001216:10232-10251 Msa1336490:CDS 20.0%
!!! CCAATTTTTGTTGATTTTTT+TGG + tig0001216:10425-10444 Msa1336490:intergenic 20.0%
!! CCAAAAAAATCAACAAAAAT+TGG - tig0001216:10422-10441 Msa1336490:CDS 20.0%
!! TATTTAATTAAAAAAGGGGA+AGG + tig0001216:10563-10582 Msa1336490:intergenic 20.0%
!! TTTAAAAAAACATGCTCTAA+TGG - tig0001216:10919-10938 Msa1336490:CDS 20.0%
!!! TTATGTTTTAACTCATTGTT+AGG - tig0001216:10985-11004 Msa1336490:intron 20.0%
!!! TATGTTTTAACTCATTGTTA+GGG - tig0001216:10986-11005 Msa1336490:intron 20.0%
!! GAAGTTAAATTATTTAGACA+TGG - tig0001216:11366-11385 Msa1336490:intron 20.0%
!! GAGAAAAAAATGAATTATCT+CGG - tig0001216:11580-11599 Msa1336490:intron 20.0%
!! AATTTATGCATTGCTTTAAT+TGG - tig0001216:11695-11714 Msa1336490:intron 20.0%
!! ATTTATGCATTGCTTTAATT+GGG - tig0001216:11696-11715 Msa1336490:intron 20.0%
!! ATTATTAGACCTAATATACT+TGG + tig0001216:11885-11904 Msa1336490:intergenic 20.0%
!! AATGATGTTCGTATAAAATA+AGG - tig0001216:11902-11921 Msa1336490:CDS 20.0%
! TGCGTTATTTACATTTGATT+TGG - tig0001216:10184-10203 Msa1336490:CDS 25.0%
!! GCGTTATTTACATTTGATTT+GGG - tig0001216:10185-10204 Msa1336490:CDS 25.0%
! ATTTGTAATTCCAGATTTGT+TGG - tig0001216:10338-10357 Msa1336490:CDS 25.0%
! AAATCAACAAAAATTGGGTT+TGG - tig0001216:10428-10447 Msa1336490:CDS 25.0%
!!! TTGTTTTTTAAAAAGGTCCT+TGG + tig0001216:10740-10759 Msa1336490:intergenic 25.0%
!!! AATATAGTCAATTTGGGTTT+TGG + tig0001216:10807-10826 Msa1336490:intergenic 25.0%
!! TTGAGGCTAAAATATGATTT+TGG + tig0001216:10838-10857 Msa1336490:intergenic 25.0%
!!! AGAGCATGTTTTTTTAAAAG+AGG + tig0001216:10917-10936 Msa1336490:intergenic 25.0%
! TGAAGTAGGAAATAAAAGAA+TGG - tig0001216:11324-11343 Msa1336490:intron 25.0%
! GTTAAATTATTTAGACATGG+TGG - tig0001216:11369-11388 Msa1336490:intron 25.0%
!! TTTTCTCAATAAATCTCTCT+GGG + tig0001216:11567-11586 Msa1336490:intergenic 25.0%
!! TTTTTCTCAATAAATCTCTC+TGG + tig0001216:11568-11587 Msa1336490:intergenic 25.0%
!! GATTTTGAATCTATACCATT+TGG - tig0001216:11607-11626 Msa1336490:intron 25.0%
! GTAAAAATGCCAAGTATATT+AGG - tig0001216:11873-11892 Msa1336490:CDS 25.0%
! TGCGTTATTTACATTTGATT+TGG - tig0001216:10184-10203 Msa1336490:CDS 25.0%
!! GCGTTATTTACATTTGATTT+GGG - tig0001216:10185-10204 Msa1336490:CDS 25.0%
! ATTTGTAATTCCAGATTTGT+TGG - tig0001216:10338-10357 Msa1336490:CDS 25.0%
! AAATCAACAAAAATTGGGTT+TGG - tig0001216:10428-10447 Msa1336490:CDS 25.0%
!!! TTGTTTTTTAAAAAGGTCCT+TGG + tig0001216:10740-10759 Msa1336490:intergenic 25.0%
!!! AATATAGTCAATTTGGGTTT+TGG + tig0001216:10807-10826 Msa1336490:intergenic 25.0%
!! TTGAGGCTAAAATATGATTT+TGG + tig0001216:10838-10857 Msa1336490:intergenic 25.0%
!!! AGAGCATGTTTTTTTAAAAG+AGG + tig0001216:10917-10936 Msa1336490:intergenic 25.0%
! TGAAGTAGGAAATAAAAGAA+TGG - tig0001216:11324-11343 Msa1336490:intron 25.0%
! GTTAAATTATTTAGACATGG+TGG - tig0001216:11369-11388 Msa1336490:intron 25.0%
!! TTTTCTCAATAAATCTCTCT+GGG + tig0001216:11567-11586 Msa1336490:intergenic 25.0%
!! TTTTTCTCAATAAATCTCTC+TGG + tig0001216:11568-11587 Msa1336490:intergenic 25.0%
!! GATTTTGAATCTATACCATT+TGG - tig0001216:11607-11626 Msa1336490:intron 25.0%
! GTAAAAATGCCAAGTATATT+AGG - tig0001216:11873-11892 Msa1336490:CDS 25.0%
TTGAGATTCTGAATTTGTGA+TGG + tig0001216:10090-10109 Msa1329200:intergenic 30.0%
! TGATTTGGGAATCAATCAAA+TGG - tig0001216:10199-10218 Msa1336490:CDS 30.0%
GATTTGGGAATCAATCAAAT+GGG - tig0001216:10200-10219 Msa1336490:CDS 30.0%
!! TAAAGATGGGTTAAGTTAAG+TGG - tig0001216:10245-10264 Msa1336490:CDS 30.0%
! AATAGCATCTCTTTTACACT+AGG + tig0001216:10321-10340 Msa1336490:intergenic 30.0%
GATTGAAGAATAAAGGCTAA+AGG - tig0001216:10450-10469 Msa1336490:CDS 30.0%
AGCCAAATCATCAAAAAAGT+GGG - tig0001216:10713-10732 Msa1336490:CDS 30.0%
CCTGCAAATATAGTCAATTT+GGG + tig0001216:10813-10832 Msa1336490:intergenic 30.0%
CCAAATTGACTATATTTGCA+GGG - tig0001216:10811-10830 Msa1336490:CDS 30.0%
! TATTTTACTCGACATGATAG+TGG - tig0001216:11204-11223 Msa1336490:intron 30.0%
GATGAGATACAAAATGAAGT+AGG - tig0001216:11310-11329 Msa1336490:intron 30.0%
ACGACTTATAGTAAATGCAT+GGG - tig0001216:11492-11511 Msa1336490:intron 30.0%
GGGTTTAATTACTGTTAAGT+TGG - tig0001216:11663-11682 Msa1336490:intron 30.0%
TCAGAAGGACTAATATTATG+TGG + tig0001216:11727-11746 Msa1336490:intergenic 30.0%
! TAGTCCTTCTGATTTGAATA+TGG - tig0001216:11735-11754 Msa1336490:intron 30.0%
TTGAATATGGAGGAGAAATT+TGG - tig0001216:11748-11767 Msa1336490:intron 30.0%
AATAAGCTTGAACAAGAACA+AGG + tig0001216:11849-11868 Msa1336490:intergenic 30.0%
TTGAGATTCTGAATTTGTGA+TGG + tig0001216:10090-10109 Msa1336490:intergenic 30.0%
! TGATTTGGGAATCAATCAAA+TGG - tig0001216:10199-10218 Msa1336490:CDS 30.0%
GATTTGGGAATCAATCAAAT+GGG - tig0001216:10200-10219 Msa1336490:CDS 30.0%
!! TAAAGATGGGTTAAGTTAAG+TGG - tig0001216:10245-10264 Msa1336490:CDS 30.0%
! AATAGCATCTCTTTTACACT+AGG + tig0001216:10321-10340 Msa1336490:intergenic 30.0%
GATTGAAGAATAAAGGCTAA+AGG - tig0001216:10450-10469 Msa1336490:CDS 30.0%
AGCCAAATCATCAAAAAAGT+GGG - tig0001216:10713-10732 Msa1336490:CDS 30.0%
CCTGCAAATATAGTCAATTT+GGG + tig0001216:10813-10832 Msa1336490:intergenic 30.0%
CCAAATTGACTATATTTGCA+GGG - tig0001216:10811-10830 Msa1336490:CDS 30.0%
! TATTTTACTCGACATGATAG+TGG - tig0001216:11204-11223 Msa1336490:intron 30.0%
GATGAGATACAAAATGAAGT+AGG - tig0001216:11310-11329 Msa1336490:intron 30.0%
ACGACTTATAGTAAATGCAT+GGG - tig0001216:11492-11511 Msa1336490:intron 30.0%
GGGTTTAATTACTGTTAAGT+TGG - tig0001216:11663-11682 Msa1336490:intron 30.0%
TCAGAAGGACTAATATTATG+TGG + tig0001216:11727-11746 Msa1336490:intergenic 30.0%
! TAGTCCTTCTGATTTGAATA+TGG - tig0001216:11735-11754 Msa1336490:intron 30.0%
TTGAATATGGAGGAGAAATT+TGG - tig0001216:11748-11767 Msa1336490:intron 30.0%
AATAAGCTTGAACAAGAACA+AGG + tig0001216:11849-11868 Msa1336490:intergenic 30.0%
AGATTCTGAATTTGTGATGG+TGG + tig0001216:10087-10106 Msa1329200:intergenic 35.0%
CTTCACTGTTTGTGTTCTAA+TGG - tig0001216:10275-10294 Msa1336490:CDS 35.0%
TGTTCTAATGGAAGATCCAA+AGG - tig0001216:10287-10306 Msa1336490:CDS 35.0%
AACAACAACACCAACAAATC+TGG + tig0001216:10351-10370 Msa1336490:intergenic 35.0%
ACATGAAGAAGATGAGAAGA+GGG - tig0001216:10384-10403 Msa1336490:CDS 35.0%
GGGTTTGGATTGAAGAATAA+AGG - tig0001216:10443-10462 Msa1336490:CDS 35.0%
AAGAATAAAGGCTAAAGGTG+TGG - tig0001216:10455-10474 Msa1336490:CDS 35.0%
AAGGATGAAGAAGATGAAGA+GGG - tig0001216:10493-10512 Msa1336490:CDS 35.0%
! CCAATTTTCCCATTCTTCTT+CGG + tig0001216:10537-10556 Msa1336490:intergenic 35.0%
ACTGTACAATCTTGTACATG+TGG + tig0001216:10667-10686 Msa1336490:intergenic 35.0%
!!! CACTTTTTTGATGATTTGGC+TGG + tig0001216:10714-10733 Msa1336490:intergenic 35.0%
CAGCCAAATCATCAAAAAAG+TGG - tig0001216:10712-10731 Msa1336490:CDS 35.0%
GCCAAATCATCAAAAAAGTG+GGG - tig0001216:10714-10733 Msa1336490:CDS 35.0%
CCCAAATTGACTATATTTGC+AGG - tig0001216:10810-10829 Msa1336490:CDS 35.0%
CCCTGCAAATATAGTCAATT+TGG + tig0001216:10814-10833 Msa1336490:intergenic 35.0%
TTAGCCTCAACTATATTCAC+AGG - tig0001216:10848-10867 Msa1336490:CDS 35.0%
TAGCCTCAACTATATTCACA+GGG - tig0001216:10849-10868 Msa1336490:CDS 35.0%
! CTATGAGTTCTAGTCATGAA+GGG - tig0001216:10872-10891 Msa1336490:CDS 35.0%
! TATGAGTTCTAGTCATGAAG+GGG - tig0001216:10873-10892 Msa1336490:CDS 35.0%
AGTCAGTAAAGCAATTGATG+AGG - tig0001216:11030-11049 Msa1336490:intron 35.0%
CATTGATCGAACTAACATCA+AGG - tig0001216:11180-11199 Msa1336490:intron 35.0%
ATCTGCTACCTCAATTGAAT+GGG - tig0001216:11240-11259 Msa1336490:intron 35.0%
AGATAAAGCCCATTCAATTG+AGG + tig0001216:11251-11270 Msa1336490:intergenic 35.0%
!!! TGAAGCTTTTTCATCACTCT+TGG + tig0001216:11289-11308 Msa1336490:intergenic 35.0%
TAAAAGAATGGTTGACGAGA+AGG - tig0001216:11336-11355 Msa1336490:intron 35.0%
! GATTCATGAAGGACTAGTAA+CGG + tig0001216:11427-11446 Msa1336490:intergenic 35.0%
TAGTCCTTCATGAATCTAGA+GGG - tig0001216:11431-11450 Msa1336490:intron 35.0%
CACGACTTATAGTAAATGCA+TGG - tig0001216:11491-11510 Msa1336490:intron 35.0%
ATAGTAAATGCATGGGCAAT+AGG - tig0001216:11499-11518 Msa1336490:intron 35.0%
TAGTAAATGCATGGGCAATA+GGG - tig0001216:11500-11519 Msa1336490:intron 35.0%
TAGGGAGAGATTGTAATGTT+TGG - tig0001216:11518-11537 Msa1336490:intron 35.0%
! GAATCTATACCATTTGGTTC+TGG - tig0001216:11613-11632 Msa1336490:intron 35.0%
ATTAAACCCAGTTGAATTCC+AGG + tig0001216:11652-11671 Msa1336490:intergenic 35.0%
! TCCTTCTGATTTGAATATGG+AGG - tig0001216:11738-11757 Msa1336490:intron 35.0%
TCCTCCATATTCAAATCAGA+AGG + tig0001216:11742-11761 Msa1336490:intergenic 35.0%
GCATCATTCAAACGATAACT+CGG + tig0001216:11811-11830 Msa1336490:intergenic 35.0%
ATTGATATTTGAGTCTCCAC+CGG - tig0001216:11959-11978 Msa1336490:CDS 35.0%
AGATTCTGAATTTGTGATGG+TGG + tig0001216:10087-10106 Msa1336490:intergenic 35.0%
CTTCACTGTTTGTGTTCTAA+TGG - tig0001216:10275-10294 Msa1336490:CDS 35.0%
TGTTCTAATGGAAGATCCAA+AGG - tig0001216:10287-10306 Msa1336490:CDS 35.0%
AACAACAACACCAACAAATC+TGG + tig0001216:10351-10370 Msa1336490:intergenic 35.0%
ACATGAAGAAGATGAGAAGA+GGG - tig0001216:10384-10403 Msa1336490:CDS 35.0%
GGGTTTGGATTGAAGAATAA+AGG - tig0001216:10443-10462 Msa1336490:CDS 35.0%
AAGAATAAAGGCTAAAGGTG+TGG - tig0001216:10455-10474 Msa1336490:CDS 35.0%
AAGGATGAAGAAGATGAAGA+GGG - tig0001216:10493-10512 Msa1336490:CDS 35.0%
! CCAATTTTCCCATTCTTCTT+CGG + tig0001216:10537-10556 Msa1336490:intergenic 35.0%
ACTGTACAATCTTGTACATG+TGG + tig0001216:10667-10686 Msa1336490:intergenic 35.0%
!!! CACTTTTTTGATGATTTGGC+TGG + tig0001216:10714-10733 Msa1336490:intergenic 35.0%
CAGCCAAATCATCAAAAAAG+TGG - tig0001216:10712-10731 Msa1336490:CDS 35.0%
GCCAAATCATCAAAAAAGTG+GGG - tig0001216:10714-10733 Msa1336490:CDS 35.0%
CCCAAATTGACTATATTTGC+AGG - tig0001216:10810-10829 Msa1336490:CDS 35.0%
CCCTGCAAATATAGTCAATT+TGG + tig0001216:10814-10833 Msa1336490:intergenic 35.0%
TTAGCCTCAACTATATTCAC+AGG - tig0001216:10848-10867 Msa1336490:CDS 35.0%
TAGCCTCAACTATATTCACA+GGG - tig0001216:10849-10868 Msa1336490:CDS 35.0%
! CTATGAGTTCTAGTCATGAA+GGG - tig0001216:10872-10891 Msa1336490:CDS 35.0%
! TATGAGTTCTAGTCATGAAG+GGG - tig0001216:10873-10892 Msa1336490:CDS 35.0%
AGTCAGTAAAGCAATTGATG+AGG - tig0001216:11030-11049 Msa1336490:intron 35.0%
CATTGATCGAACTAACATCA+AGG - tig0001216:11180-11199 Msa1336490:intron 35.0%
ATCTGCTACCTCAATTGAAT+GGG - tig0001216:11240-11259 Msa1336490:intron 35.0%
AGATAAAGCCCATTCAATTG+AGG + tig0001216:11251-11270 Msa1336490:intergenic 35.0%
!!! TGAAGCTTTTTCATCACTCT+TGG + tig0001216:11289-11308 Msa1336490:intergenic 35.0%
TAAAAGAATGGTTGACGAGA+AGG - tig0001216:11336-11355 Msa1336490:intron 35.0%
! GATTCATGAAGGACTAGTAA+CGG + tig0001216:11427-11446 Msa1336490:intergenic 35.0%
TAGTCCTTCATGAATCTAGA+GGG - tig0001216:11431-11450 Msa1336490:intron 35.0%
CACGACTTATAGTAAATGCA+TGG - tig0001216:11491-11510 Msa1336490:intron 35.0%
ATAGTAAATGCATGGGCAAT+AGG - tig0001216:11499-11518 Msa1336490:intron 35.0%
TAGTAAATGCATGGGCAATA+GGG - tig0001216:11500-11519 Msa1336490:intron 35.0%
TAGGGAGAGATTGTAATGTT+TGG - tig0001216:11518-11537 Msa1336490:intron 35.0%
! GAATCTATACCATTTGGTTC+TGG - tig0001216:11613-11632 Msa1336490:intron 35.0%
ATTAAACCCAGTTGAATTCC+AGG + tig0001216:11652-11671 Msa1336490:intergenic 35.0%
! TCCTTCTGATTTGAATATGG+AGG - tig0001216:11738-11757 Msa1336490:intron 35.0%
TCCTCCATATTCAAATCAGA+AGG + tig0001216:11742-11761 Msa1336490:intergenic 35.0%
GCATCATTCAAACGATAACT+CGG + tig0001216:11811-11830 Msa1336490:intergenic 35.0%
ATTGATATTTGAGTCTCCAC+CGG - tig0001216:11959-11978 Msa1336490:CDS 35.0%
!! TTCTGAATTTGTGATGGTGG+TGG + tig0001216:10084-10103 Msa1329200:intergenic 40.0%
AACCCAGATTCAACATCGAT+AGG - tig0001216:10148-10167 Msa1336490:exon 40.0%
TGCCTATCGATGTTGAATCT+GGG + tig0001216:10153-10172 Msa1336490:intergenic 40.0%
ATTCAACATCGATAGGCAGA+GGG - tig0001216:10155-10174 Msa1336490:CDS 40.0%
ACACTAGGTAAGTGAACCTT+TGG + tig0001216:10306-10325 Msa1336490:intergenic 40.0%
GACATGAAGAAGATGAGAAG+AGG - tig0001216:10383-10402 Msa1336490:CDS 40.0%
CAAGGATGAAGAAGATGAAG+AGG - tig0001216:10492-10511 Msa1336490:CDS 40.0%
ATGAAGAAGATGAAGAGGGA+TGG - tig0001216:10497-10516 Msa1336490:CDS 40.0%
CCGAAGAAGAATGGGAAAAT+TGG - tig0001216:10534-10553 Msa1336490:CDS 40.0%
!!! GATTTGGCTGGTTTTTGCTT+AGG + tig0001216:10702-10721 Msa1336490:intergenic 40.0%
!!! GCCCCACTTTTTTGATGATT+TGG + tig0001216:10718-10737 Msa1336490:intergenic 40.0%
TAGCCCTGTGAATATAGTTG+AGG + tig0001216:10855-10874 Msa1336490:intergenic 40.0%
! GCTATGAGTTCTAGTCATGA+AGG - tig0001216:10871-10890 Msa1336490:CDS 40.0%
! ATGAGTTCTAGTCATGAAGG+GGG - tig0001216:10874-10893 Msa1336490:CDS 40.0%
TATGCACCAAACCATTGATG+TGG - tig0001216:11138-11157 Msa1336490:CDS 40.0%
CATCTGCTACCTCAATTGAA+TGG - tig0001216:11239-11258 Msa1336490:intron 40.0%
CTAGTCCTTCATGAATCTAG+AGG - tig0001216:11430-11449 Msa1336490:intron 40.0%
!! TTCTGAATTTGTGATGGTGG+TGG + tig0001216:10084-10103 Msa1336490:intergenic 40.0%
AACCCAGATTCAACATCGAT+AGG - tig0001216:10148-10167 Msa1336490:exon 40.0%
TGCCTATCGATGTTGAATCT+GGG + tig0001216:10153-10172 Msa1336490:intergenic 40.0%
ATTCAACATCGATAGGCAGA+GGG - tig0001216:10155-10174 Msa1336490:CDS 40.0%
ACACTAGGTAAGTGAACCTT+TGG + tig0001216:10306-10325 Msa1336490:intergenic 40.0%
GACATGAAGAAGATGAGAAG+AGG - tig0001216:10383-10402 Msa1336490:CDS 40.0%
CAAGGATGAAGAAGATGAAG+AGG - tig0001216:10492-10511 Msa1336490:CDS 40.0%
ATGAAGAAGATGAAGAGGGA+TGG - tig0001216:10497-10516 Msa1336490:CDS 40.0%
CCGAAGAAGAATGGGAAAAT+TGG - tig0001216:10534-10553 Msa1336490:CDS 40.0%
!!! GATTTGGCTGGTTTTTGCTT+AGG + tig0001216:10702-10721 Msa1336490:intergenic 40.0%
!!! GCCCCACTTTTTTGATGATT+TGG + tig0001216:10718-10737 Msa1336490:intergenic 40.0%
TAGCCCTGTGAATATAGTTG+AGG + tig0001216:10855-10874 Msa1336490:intergenic 40.0%
! GCTATGAGTTCTAGTCATGA+AGG - tig0001216:10871-10890 Msa1336490:CDS 40.0%
! ATGAGTTCTAGTCATGAAGG+GGG - tig0001216:10874-10893 Msa1336490:CDS 40.0%
TATGCACCAAACCATTGATG+TGG - tig0001216:11138-11157 Msa1336490:CDS 40.0%
CATCTGCTACCTCAATTGAA+TGG - tig0001216:11239-11258 Msa1336490:intron 40.0%
CTAGTCCTTCATGAATCTAG+AGG - tig0001216:11430-11449 Msa1336490:intron 40.0%
!! GAATTTGTGATGGTGGTGGT+CGG + tig0001216:10080-10099 Msa1329200:intergenic 45.0%
CTGCCTATCGATGTTGAATC+TGG + tig0001216:10154-10173 Msa1336490:intergenic 45.0%
GATTCAACATCGATAGGCAG+AGG - tig0001216:10154-10173 Msa1336490:exon 45.0%
AAGAAGATGAAGAGGGATGG+AGG - tig0001216:10500-10519 Msa1336490:CDS 45.0%
AGAAGATGAAGAGGGATGGA+GGG - tig0001216:10501-10520 Msa1336490:CDS 45.0%
!!! TTGGCTGGTTTTTGCTTAGG+TGG + tig0001216:10699-10718 Msa1336490:intergenic 45.0%
TCATCAAAAAAGTGGGGCCA+AGG - tig0001216:10720-10739 Msa1336490:CDS 45.0%
! AGCAATTGATGAGGTGCTAG+AGG - tig0001216:11039-11058 Msa1336490:intron 45.0%
CACCAAACCATTGATGTGGA+GGG - tig0001216:11142-11161 Msa1336490:CDS 45.0%
TTGTTCACCCTCCACATCAA+TGG + tig0001216:11152-11171 Msa1336490:intergenic 45.0%
TGCTACTGGGTGAAGTCTTA+AGG + tig0001216:11404-11423 Msa1336490:intergenic 45.0%
TGCTCCCTCTAGATTCATGA+AGG + tig0001216:11438-11457 Msa1336490:intergenic 45.0%
! AGAGGGAGCACAACAATTGA+TGG - tig0001216:11448-11467 Msa1336490:intron 45.0%
ACGTTGTCCTGGAATTCAAC+TGG - tig0001216:11642-11661 Msa1336490:intron 45.0%
CGTTGTCCTGGAATTCAACT+GGG - tig0001216:11643-11662 Msa1336490:intron 45.0%
GCATGCAAATGTTGAGCTCT+TGG + tig0001216:11784-11803 Msa1336490:intergenic 45.0%
!! GAATTTGTGATGGTGGTGGT+CGG + tig0001216:10080-10099 Msa1336490:intergenic 45.0%
CTGCCTATCGATGTTGAATC+TGG + tig0001216:10154-10173 Msa1336490:intergenic 45.0%
GATTCAACATCGATAGGCAG+AGG - tig0001216:10154-10173 Msa1336490:exon 45.0%
AAGAAGATGAAGAGGGATGG+AGG - tig0001216:10500-10519 Msa1336490:CDS 45.0%
AGAAGATGAAGAGGGATGGA+GGG - tig0001216:10501-10520 Msa1336490:CDS 45.0%
!!! TTGGCTGGTTTTTGCTTAGG+TGG + tig0001216:10699-10718 Msa1336490:intergenic 45.0%
TCATCAAAAAAGTGGGGCCA+AGG - tig0001216:10720-10739 Msa1336490:CDS 45.0%
! AGCAATTGATGAGGTGCTAG+AGG - tig0001216:11039-11058 Msa1336490:intron 45.0%
CACCAAACCATTGATGTGGA+GGG - tig0001216:11142-11161 Msa1336490:CDS 45.0%
TTGTTCACCCTCCACATCAA+TGG + tig0001216:11152-11171 Msa1336490:intergenic 45.0%
TGCTACTGGGTGAAGTCTTA+AGG + tig0001216:11404-11423 Msa1336490:intergenic 45.0%
TGCTCCCTCTAGATTCATGA+AGG + tig0001216:11438-11457 Msa1336490:intergenic 45.0%
! AGAGGGAGCACAACAATTGA+TGG - tig0001216:11448-11467 Msa1336490:intron 45.0%
ACGTTGTCCTGGAATTCAAC+TGG - tig0001216:11642-11661 Msa1336490:intron 45.0%
CGTTGTCCTGGAATTCAACT+GGG - tig0001216:11643-11662 Msa1336490:intron 45.0%
GCATGCAAATGTTGAGCTCT+TGG + tig0001216:11784-11803 Msa1336490:intergenic 45.0%
!! AAAATATTTAATTAAAAAAG+GGG + tig0001216:10567-10586 Msa1336490:intergenic 5.0%
!!! AAATTTTTTGTTTTTTAAAA+AGG + tig0001216:10747-10766 Msa1336490:intergenic 5.0%
!! AAAATATTTAATTAAAAAAG+GGG + tig0001216:10567-10586 Msa1336490:intergenic 5.0%
!!! AAATTTTTTGTTTTTTAAAA+AGG + tig0001216:10747-10766 Msa1336490:intergenic 5.0%
!! GGTGGTGGTTGCTCACTTTT+TGG + tig0001216:10046-10065 Msa1329200:intergenic 50.0%
! AGGCTAAAGGTGTGGTGTTG+TGG - tig0001216:10463-10482 Msa1336490:CDS 50.0%
!! CTAAAGGTGTGGTGTTGTGG+TGG - tig0001216:10466-10485 Msa1336490:CDS 50.0%
!! GTGGTGTTGTGGTGGATACA+AGG - tig0001216:10474-10493 Msa1336490:CDS 50.0%
TGAAGGCTGCCGAAGAAGAA+TGG - tig0001216:10525-10544 Msa1336490:CDS 50.0%
GAAGGCTGCCGAAGAAGAAT+GGG - tig0001216:10526-10545 Msa1336490:CDS 50.0%
GCACCAAACCATTGATGTGG+AGG - tig0001216:11141-11160 Msa1336490:CDS 50.0%
CACCCTCCACATCAATGGTT+TGG + tig0001216:11147-11166 Msa1336490:intergenic 50.0%
!! GGACTAGTAACGGTGCTACT+GGG + tig0001216:11417-11436 Msa1336490:intergenic 50.0%
!! AGGACTAGTAACGGTGCTAC+TGG + tig0001216:11418-11437 Msa1336490:intergenic 50.0%
CGTCTACGACCAGAACCAAA+TGG + tig0001216:11625-11644 Msa1336490:intergenic 50.0%
!! GGTGGTGGTTGCTCACTTTT+TGG + tig0001216:10046-10065 Msa1336490:intergenic 50.0%
! AGGCTAAAGGTGTGGTGTTG+TGG - tig0001216:10463-10482 Msa1336490:CDS 50.0%
!! CTAAAGGTGTGGTGTTGTGG+TGG - tig0001216:10466-10485 Msa1336490:CDS 50.0%
!! GTGGTGTTGTGGTGGATACA+AGG - tig0001216:10474-10493 Msa1336490:CDS 50.0%
TGAAGGCTGCCGAAGAAGAA+TGG - tig0001216:10525-10544 Msa1336490:CDS 50.0%
GAAGGCTGCCGAAGAAGAAT+GGG - tig0001216:10526-10545 Msa1336490:CDS 50.0%
GCACCAAACCATTGATGTGG+AGG - tig0001216:11141-11160 Msa1336490:CDS 50.0%
CACCCTCCACATCAATGGTT+TGG + tig0001216:11147-11166 Msa1336490:intergenic 50.0%
!! GGACTAGTAACGGTGCTACT+GGG + tig0001216:11417-11436 Msa1336490:intergenic 50.0%
!! AGGACTAGTAACGGTGCTAC+TGG + tig0001216:11418-11437 Msa1336490:intergenic 50.0%
CGTCTACGACCAGAACCAAA+TGG + tig0001216:11625-11644 Msa1336490:intergenic 50.0%
!! TTGTGATGGTGGTGGTCGGT+GGG + tig0001216:10076-10095 Msa1329200:intergenic 55.0%
!! TTTGTGATGGTGGTGGTCGG+TGG + tig0001216:10077-10096 Msa1329200:intergenic 55.0%
GAAGAGGGATGGAGGGATGA+AGG - tig0001216:10508-10527 Msa1336490:CDS 55.0%
TTGTACATGTGGCGCAGACG+TGG + tig0001216:10656-10675 Msa1336490:intergenic 55.0%
TCTGGTCGTAGACGTTGTCC+TGG - tig0001216:11631-11650 Msa1336490:intron 55.0%
!! TTGTGATGGTGGTGGTCGGT+GGG + tig0001216:10076-10095 Msa1336490:intergenic 55.0%
!! TTTGTGATGGTGGTGGTCGG+TGG + tig0001216:10077-10096 Msa1336490:intergenic 55.0%
GAAGAGGGATGGAGGGATGA+AGG - tig0001216:10508-10527 Msa1336490:CDS 55.0%
TTGTACATGTGGCGCAGACG+TGG + tig0001216:10656-10675 Msa1336490:intergenic 55.0%
TCTGGTCGTAGACGTTGTCC+TGG - tig0001216:11631-11650 Msa1336490:intron 55.0%
!! TCGGTGGGCGATGGTGGTGG+TGG + tig0001216:10061-10080 Msa1329200:intergenic 70.0%
! TGGTCGGTGGGCGATGGTGG+TGG + tig0001216:10064-10083 Msa1329200:intergenic 70.0%
TGGTGGTCGGTGGGCGATGG+TGG + tig0001216:10067-10086 Msa1329200:intergenic 70.0%
!! TGGTGGTGGTCGGTGGGCGA+TGG + tig0001216:10070-10089 Msa1329200:intergenic 70.0%
!! TCGGTGGGCGATGGTGGTGG+TGG + tig0001216:10061-10080 Msa1336490:intergenic 70.0%
! TGGTCGGTGGGCGATGGTGG+TGG + tig0001216:10064-10083 Msa1336490:intergenic 70.0%
TGGTGGTCGGTGGGCGATGG+TGG + tig0001216:10067-10086 Msa1336490:intergenic 70.0%
!! TGGTGGTGGTCGGTGGGCGA+TGG + tig0001216:10070-10089 Msa1336490:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0001216 gene 10013 11985 10013 ID=Msa1336490;Name=Msa1336490
tig0001216 mRNA 10013 11985 10013 ID=Msa1336490-mRNA-1;Parent=Msa1336490;Name=Msa1336490-mRNA-1;_AED=0.47;_eAED=0.50;_QI=0|0|0.33|0.66|1|1|3|142|359
tig0001216 exon 10013 10991 10013 ID=Msa1336490-mRNA-1:exon:751;Parent=Msa1336490-mRNA-1
tig0001216 exon 11098 11166 11098 ID=Msa1336490-mRNA-1:exon:750;Parent=Msa1336490-mRNA-1
tig0001216 exon 11812 11985 11812 ID=Msa1336490-mRNA-1:exon:749;Parent=Msa1336490-mRNA-1
tig0001216 CDS 11812 11985 11812 ID=Msa1336490-mRNA-1:cds;Parent=Msa1336490-mRNA-1
tig0001216 CDS 11098 11166 11098 ID=Msa1336490-mRNA-1:cds;Parent=Msa1336490-mRNA-1
tig0001216 CDS 10155 10991 10155 ID=Msa1336490-mRNA-1:cds;Parent=Msa1336490-mRNA-1
tig0001216 three_prime_UTR 10013 10154 10013 ID=Msa1336490-mRNA-1:three_prime_utr;Parent=Msa1336490-mRNA-1
Gene Sequence

>Msa1336490

ATGGCATCAAGTCTTGGAGAAGCATCTTTTCCAAAAAGTGAGCAACCACCACCACCATCGCCCACCGACCACCACCATCACAAATTCAGAATCTCAAATTCATCTGAATCTCAAATTCGAGCAAGACAAAACTCGAACCCAGATTCAACATCGATAGGCAGAGGGAAAAGTTGCGGACCAAAATCATATTTTAGCCTCAACTATATTCACAGGGCTATGAGTTCTAGTCATGAAGGGGGAAATGGATTAACAAGATCTTGCAAGAAAGTCAGTAAAGCAATTGATGAGGTGCTAGAGGTGATATTAACAGAACATGAACAAGCTGTTAACGTAAACAAAACTCGTAAAGATTTTGTAGACATACTTCTTTCAATTATGCACCAAACCATTGATGTGGAGGGTGAACAAAATCTTGTCATTGATCGAACTAACATCAAGGCTATTTTACTCGACATGATAGTGGCAGCAATTGATACATCTGCTACCTCAATTGAATGGGCTTTATCTGAACTTTTAAGACATCCAAGAGTGATGAAAAAGCTTCAAGATGAGATACAAAATGAAGTAGGAAATAAAAGAATGGTTGACGAGAAGGATCTGAAGAAGTTAAATTATTTAGACATGGTGGTTGATGAGACCTTAAGACTTCACCCAGTAGCACCGTTACTAGTCCTTCATGAATCTAGAGGGAGCACAACAATTGATGGTTATTTTATAAAGGAAAAGACACGACTTATAGTAAATGCATGGGCAATAGGGAGAGATTGTAATGTTTGGTCAGAAAATGCTGAAGAATTTTACCCAGAGAGATTTATTGAGAAAAAAATGAATTATCTCGGACAAGATTTTGAATCTATACCATTTGGTTCTGGTCGTAGACGTTGTCCTGGAATTCAACTGGGTTTAATTACTGTTAAGTTGGTTATAGCTCAATTTATGCATTGCTTTAATTGGGAATTTCCACATAATATTAGTCCTTCTGATTTGAATATGGAGGAGAAATTTGGACTCACTATACCAAGAGCTCAACATTTGCATGCAATACCGAGTTATCGTTTGAATGATGCTAAGCATGAATAG

Protein sequence

>Msa1336490

MASSLGEASFPKSEQPPPPSPTDHHHHKFRISNSSESQIRARQNSNPDSTSIGRGKSCGPKSYFSLNYIHRAMSSSHEGGNGLTRSCKKVSKAIDEVLEVILTEHEQAVNVNKTRKDFVDILLSIMHQTIDVEGEQNLVIDRTNIKAILLDMIVAAIDTSATSIEWALSELLRHPRVMKKLQDEIQNEVGNKRMVDEKDLKKLNYLDMVVDETLRLHPVAPLLVLHESRGSTTIDGYFIKEKTRLIVNAWAIGRDCNVWSENAEEFYPERFIEKKMNYLGQDFESIPFGSGRRRCPGIQLGLITVKLVIAQFMHCFNWEFPHNISPSDLNMEEKFGLTIPRAQHLHAIPSYRLNDAKHE*