AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1454150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1454150 MtrunA17_Chr1g0193421 97.222 180 5 0 1 180 40 219 6.23e-124 348
Msa1454150 MtrunA17_Chr7g0271211 79.330 179 37 0 1 179 36 214 1.30e-102 293
Msa1454150 MtrunA17_Chr1g0193671 70.556 180 53 0 1 180 39 218 2.21e-90 263
Msa1454150 MtrunA17_Chr5g0414971 46.023 176 94 1 3 177 45 220 6.34e-50 160
Msa1454150 MtrunA17_Chr4g0007051 45.506 178 92 2 1 175 40 215 1.39e-48 157
Msa1454150 MtrunA17_Chr4g0007031 45.506 178 92 2 1 175 40 215 1.70e-48 157
Msa1454150 MtrunA17_Chr5g0419971 45.506 178 92 2 1 175 40 215 1.70e-48 157
Msa1454150 MtrunA17_Chr5g0419981 45.506 178 92 2 1 175 40 215 1.70e-48 157
Msa1454150 MtrunA17_Chr4g0007041 45.506 178 92 2 1 175 40 215 1.84e-48 156
Msa1454150 MtrunA17_Chr1g0156131 44.444 171 93 1 8 176 39 209 3.88e-48 155
Msa1454150 MtrunA17_Chr2g0285871 45.506 178 92 2 1 175 40 215 3.89e-48 155
Msa1454150 MtrunA17_Chr1g0189841 45.810 179 93 2 1 176 40 217 6.59e-48 155
Msa1454150 MtrunA17_Chr1g0210761 44.000 175 95 2 4 178 38 209 6.66e-48 155
Msa1454150 MtrunA17_Chr6g0449761 46.629 178 91 2 1 176 40 215 1.35e-47 155
Msa1454150 MtrunA17_Chr6g0449731 46.629 178 91 2 1 176 40 215 1.41e-47 154
Msa1454150 MtrunA17_Chr6g0449751 46.629 178 91 2 1 176 40 215 4.16e-47 153
Msa1454150 MtrunA17_Chr6g0449771 46.067 178 92 2 1 176 40 215 8.15e-47 152
Msa1454150 MtrunA17_Chr2g0292901 43.860 171 94 1 8 176 43 213 1.85e-46 151
Msa1454150 MtrunA17_Chr2g0292831 44.444 171 93 1 8 176 42 212 2.07e-46 151
Msa1454150 MtrunA17_Chr6g0449791 46.108 167 85 2 1 164 40 204 4.62e-43 142
Msa1454150 MtrunA17_Chr2g0292861 41.860 172 97 2 8 176 7 178 1.30e-41 137
Msa1454150 MtrunA17_Chr2g0292841 41.279 172 98 2 8 176 7 178 2.33e-40 134
Msa1454150 MtrunA17_Chr6g0449781 42.697 178 97 3 1 176 40 214 9.44e-40 134
Msa1454150 MtrunA17_Chr1g0178711 38.150 173 104 2 8 180 56 225 6.95e-39 132
Msa1454150 MtrunA17_Chr2g0300561 40.116 172 101 1 5 176 37 206 1.22e-37 129
Msa1454150 MtrunA17_Chr8g0343911 39.884 173 102 1 4 176 34 204 6.21e-37 127
Msa1454150 MtrunA17_Chr2g0300581 38.953 172 103 1 5 176 37 206 8.84e-36 124
Msa1454150 MtrunA17_Chr2g0292911 51.304 115 54 1 8 120 7 121 2.08e-35 120
Msa1454150 MtrunA17_Chr3g0130241 41.379 174 85 3 3 176 109 265 2.17e-35 125
Msa1454150 MtrunA17_Chr2g0300591 37.714 175 107 1 5 179 37 209 3.16e-35 122
Msa1454150 MtrunA17_Chr2g0302171 37.931 174 104 3 4 177 37 206 1.73e-33 118
Msa1454150 MtrunA17_Chr8g0343934 35.795 176 109 3 4 179 37 208 3.42e-33 117
Msa1454150 MtrunA17_Chr8g0343954 35.227 176 110 3 4 179 37 208 5.37e-33 117
Msa1454150 MtrunA17_Chr2g0321581 44.928 138 73 2 37 173 66 201 5.90e-33 116
Msa1454150 MtrunA17_Chr2g0321591 44.928 138 73 2 37 173 66 201 8.24e-33 116
Msa1454150 MtrunA17_Chr2g0321601 44.776 134 71 2 41 173 69 200 2.07e-32 115
Msa1454150 MtrunA17_Chr8g0343961 35.429 175 109 3 5 179 38 208 2.40e-32 115
Msa1454150 MtrunA17_Chr8g0335851 43.919 148 82 1 3 150 46 192 2.87e-32 115
Msa1454150 MtrunA17_Chr2g0313961 36.994 173 105 3 4 176 37 205 4.93e-32 114
Msa1454150 MtrunA17_Chr3g0084511 36.207 174 107 3 4 177 36 205 9.66e-32 113
Msa1454150 MtrunA17_Chr2g0301611 36.207 174 107 3 4 177 37 206 1.38e-31 113
Msa1454150 MtrunA17_Chr4g0026191 42.537 134 74 2 41 173 71 202 1.61e-31 113
Msa1454150 MtrunA17_Chr3g0084521 36.207 174 107 3 4 177 36 205 5.06e-31 111
Msa1454150 MtrunA17_Chr3g0084531 35.632 174 108 3 4 177 37 206 6.43e-31 111
Msa1454150 MtrunA17_Chr2g0297231 35.838 173 107 3 4 176 37 205 8.97e-31 110
Msa1454150 MtrunA17_Chr4g0026201 41.791 134 75 2 41 173 71 202 9.10e-31 110
Msa1454150 MtrunA17_Chr2g0297241 35.838 173 107 3 4 176 37 205 4.08e-30 109
Msa1454150 MtrunA17_Chr4g0003361 39.884 173 99 4 4 176 34 201 4.78e-30 109
Msa1454150 MtrunA17_Chr2g0302541 36.207 174 107 3 4 177 37 206 6.61e-30 108
Msa1454150 MtrunA17_Chr8g0344021 37.059 170 104 2 4 173 39 205 9.21e-29 105
Msa1454150 MtrunA17_Chr4g0012651 35.260 173 108 3 5 177 38 206 6.62e-28 103
Msa1454150 MtrunA17_Chr7g0217811 34.483 174 110 3 4 177 37 206 2.13e-27 102
Msa1454150 MtrunA17_Chr5g0411961 31.609 174 115 3 3 176 36 205 3.51e-27 102
Msa1454150 MtrunA17_Chr8g0343921 33.333 171 110 2 4 174 35 201 6.58e-27 101
Msa1454150 MtrunA17_Chr8g0344041 35.632 174 107 4 4 176 40 209 3.95e-25 96.7
Msa1454150 MtrunA17_Chr2g0286171 31.792 173 111 4 4 176 43 208 1.91e-24 94.7
Msa1454150 MtrunA17_Chr8g0344051 35.882 170 105 3 5 173 39 205 3.93e-24 94.0
Msa1454150 MtrunA17_Chr3g0115141 32.558 172 109 4 5 176 42 206 1.76e-23 92.4
Msa1454150 MtrunA17_Chr8g0344031 38.356 146 86 4 4 148 39 181 3.50e-20 83.6
Msa1454150 MtrunA17_Chr3g0084551 30.460 174 109 5 4 176 37 199 2.58e-16 73.9
Msa1454150 MtrunA17_Chr2g0292881 54.386 57 24 1 56 110 1 57 1.21e-14 65.1
Msa1454150 MtrunA17_Chr3g0084501 44.928 69 37 1 5 73 38 105 3.88e-12 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1454150 AT3G62020.2 72.928 181 48 1 1 180 10 190 4.10e-96 276
Msa1454150 AT3G62020.1 72.928 181 48 1 1 180 39 219 1.32e-95 276
Msa1454150 AT1G09560.1 70.000 180 54 0 1 180 40 219 7.92e-93 270
Msa1454150 AT1G02335.1 70.950 179 52 0 2 180 41 219 6.39e-91 265
Msa1454150 AT5G26700.1 62.778 180 64 1 1 180 37 213 4.97e-82 242
Msa1454150 AT3G05930.1 58.011 181 75 1 1 180 39 219 9.90e-75 224
Msa1454150 AT1G18980.1 50.857 175 84 1 3 177 47 219 6.92e-56 176
Msa1454150 AT1G18970.1 50.286 175 85 1 3 177 47 219 1.87e-54 172
Msa1454150 AT4G14630.1 49.162 179 88 1 1 176 44 222 2.99e-53 169
Msa1454150 AT3G05950.1 48.333 180 90 1 1 177 43 222 7.79e-52 166
Msa1454150 AT5G39160.1 43.333 180 99 1 1 177 41 220 1.60e-50 162
Msa1454150 AT5G39130.1 43.333 180 99 1 1 177 41 220 2.55e-50 162
Msa1454150 AT5G39190.1 43.333 180 99 1 1 177 41 220 2.70e-50 162
Msa1454150 AT3G04200.1 46.961 181 93 1 1 178 44 224 2.92e-50 162
Msa1454150 AT5G39150.1 44.693 179 96 1 1 176 41 219 2.86e-49 159
Msa1454150 AT5G39120.1 44.693 179 96 1 1 176 41 219 2.89e-49 159
Msa1454150 AT5G39110.1 44.134 179 97 1 1 176 42 220 5.12e-49 158
Msa1454150 AT5G39160.3 42.614 176 98 1 5 177 41 216 5.19e-49 158
Msa1454150 AT5G39180.1 44.134 179 97 1 1 176 41 219 1.57e-48 157
Msa1454150 AT5G38960.1 46.629 178 92 2 3 177 46 223 1.15e-47 155
Msa1454150 AT5G38940.1 45.506 178 95 1 1 176 44 221 7.05e-47 153
Msa1454150 AT5G38940.2 45.506 178 95 1 1 176 68 245 1.15e-46 153
Msa1454150 AT5G38930.1 46.067 178 94 1 1 176 44 221 1.66e-46 152
Msa1454150 AT5G38910.1 45.506 178 95 1 1 176 42 219 1.40e-45 149
Msa1454150 AT5G39160.2 43.312 157 86 1 24 177 42 198 3.25e-44 145
Msa1454150 AT5G39190.2 43.312 157 86 1 24 177 42 198 5.35e-44 145
Msa1454150 AT3G04180.1 40.678 177 102 1 1 174 43 219 5.31e-43 143
Msa1454150 AT3G04150.1 39.773 176 103 1 1 173 43 218 6.87e-43 143
Msa1454150 AT3G04150.2 39.773 176 103 1 1 173 56 231 9.07e-43 143
Msa1454150 AT3G04190.1 41.243 177 101 1 1 174 43 219 1.10e-42 142
Msa1454150 AT3G04170.1 40.437 183 103 2 1 180 43 222 7.58e-42 140
Msa1454150 AT3G10080.1 39.535 172 99 3 8 178 54 221 1.92e-38 131
Msa1454150 AT1G10460.1 38.068 176 107 2 3 176 40 215 6.24e-38 130
Msa1454150 AT3G10080.2 39.535 172 99 3 8 178 125 292 1.01e-37 131
Msa1454150 AT5G20630.1 39.655 174 103 1 4 177 37 208 1.51e-36 126
Msa1454150 AT1G72610.1 40.116 172 101 1 5 176 35 204 1.57e-36 126
Msa1454150 AT1G74820.1 37.572 173 106 1 4 176 55 225 1.21e-35 124
Msa1454150 AT5G61750.1 42.553 141 81 0 3 143 39 179 1.56e-34 121
Msa1454150 AT5G38910.2 35.795 176 78 1 1 176 42 182 1.27e-26 100

Find 60 sgRNAs with CRISPR-Local

Find 62 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTACATTGGCATTGTTCTTT+TGG 0.249139 tig0035057:+26972 None:intergenic
TGGAAGTGAACTAAGGCTTT+TGG 0.286891 tig0035057:+26992 None:intergenic
AATGTGTTGTTGGTGCTTCC+TGG 0.292080 tig0035057:+27244 None:intergenic
TGAGGTGGGTTGAGGCCACC+TGG 0.332492 tig0035057:+27136 None:intergenic
GTTGTTGGTGCTTCCTGGTT+TGG 0.357417 tig0035057:+27249 None:intergenic
GCATTCAACAGCCAACTTCC+TGG 0.396208 tig0035057:-26932 Msa1454150:CDS
GTCTTGGTCAACACATTGTC+TGG 0.423933 tig0035057:+26863 None:intergenic
TCCTGGTTTGGCTAGTATGT+TGG 0.425869 tig0035057:+27261 None:intergenic
TGGTTTGGCTAGTATGTTGG+AGG 0.436671 tig0035057:+27264 None:intergenic
GGAAGCACCAACAACACATT+TGG 0.455191 tig0035057:-27241 Msa1454150:CDS
GAGGTGGGTTGAGGCCACCT+GGG 0.458114 tig0035057:+27137 None:intergenic
GCGCGTGGGTGAGTGTGAGG+TGG 0.468916 tig0035057:+27121 None:intergenic
GTAGCAATGGACTGTGTACC+AGG 0.469832 tig0035057:+26914 None:intergenic
CACTGAGCCAAATGTGTTGT+TGG 0.470338 tig0035057:+27234 None:intergenic
TTGAAGGGCAACTAGATGTT+GGG 0.481045 tig0035057:-27078 Msa1454150:CDS
GGTACCCACCTGGAATGTCT+TGG 0.486086 tig0035057:+26847 None:intergenic
ACATTTGGCTCAGTGGTGAC+TGG 0.488632 tig0035057:-27226 Msa1454150:CDS
TGTGTTGACCAAGACATTCC+AGG 0.491853 tig0035057:-26855 Msa1454150:CDS
GAGGTCGTGTTTGTGCTTGA+AGG 0.496245 tig0035057:-27094 Msa1454150:CDS
GCCAACGTTCAGAAAGTTCC+AGG 0.497137 tig0035057:-27202 Msa1454150:CDS
GGTGAGTGTGAGGTGGGTTG+AGG 0.500963 tig0035057:+27128 None:intergenic
AACACGACCTCGGTGGCGCG+TGG 0.502632 tig0035057:+27106 None:intergenic
CGATATGAGCACATTGGCTG+TGG 0.503399 tig0035057:+27048 None:intergenic
CAACCTCTTTGGTACCCACC+TGG 0.508354 tig0035057:+26837 None:intergenic
CGCGTGGGTGAGTGTGAGGT+GGG 0.508401 tig0035057:+27122 None:intergenic
TCAAGGATTGACTATGCCCC+AGG 0.510714 tig0035057:-27154 Msa1454150:CDS
GAAATCAGAGGCATTTACCT+TGG 0.510737 tig0035057:+27288 None:intergenic
AGGTCGTGTTTGTGCTTGAA+GGG 0.529030 tig0035057:-27093 Msa1454150:CDS
TCCTGGAACTTTCTGAACGT+TGG 0.535174 tig0035057:+27201 None:intergenic
AGGTGGGTTGAGGCCACCTG+GGG 0.540934 tig0035057:+27138 None:intergenic
ACACCAAGAGTGTTGAGTCC+TGG 0.541220 tig0035057:+27184 None:intergenic
GTTCCAGGACTCAACACTCT+TGG 0.543606 tig0035057:-27187 Msa1454150:CDS
CACTTGCAAAGAGGCATCCA+AGG 0.544665 tig0035057:-27305 Msa1454150:CDS
AGAAGGTGTGGCTGCAAACA+AGG 0.550133 tig0035057:+26889 None:intergenic
CTTGAAGGGCAACTAGATGT+TGG 0.567104 tig0035057:-27079 Msa1454150:CDS
CTCTTGGTGTGTCTCTGTCA+AGG 0.569695 tig0035057:-27171 Msa1454150:CDS
AAGAACAGCAGCAGGTACAT+TGG 0.570295 tig0035057:+26958 None:intergenic
AATGCAGAAAGAACAGCAGC+AGG 0.579009 tig0035057:+26950 None:intergenic
TCCAACATACTAGCCAAACC+AGG 0.587723 tig0035057:-27262 Msa1454150:CDS
AGGTTGAGAAAATCAAGTCT+AGG 0.589416 tig0035057:-26820 Msa1454150:CDS
ACACGACCTCGGTGGCGCGT+GGG 0.591683 tig0035057:+27107 None:intergenic
TGCAAACAAGGTAGTAGCAA+TGG 0.593622 tig0035057:+26901 None:intergenic
CAACAACACATTTGGCTCAG+TGG 0.597237 tig0035057:-27233 Msa1454150:CDS
AAAACAGGTGTAAAAGTGAA+CGG 0.600498 tig0035057:-27331 None:intergenic
GTGGCGCGTGGGTGAGTGTG+AGG 0.601342 tig0035057:+27118 None:intergenic
CATATCGAAGACAATTAGCA+AGG 0.601659 tig0035057:-27032 Msa1454150:CDS
AACACATTGTCTGGAACAGA+AGG 0.604334 tig0035057:+26872 None:intergenic
TGGACTGTGTACCAGGAAGT+TGG 0.611304 tig0035057:+26921 None:intergenic
TGTCTTCGATATGAGCACAT+TGG 0.624219 tig0035057:+27042 None:intergenic
ATTCCAGGTGGGTACCAAAG+AGG 0.627495 tig0035057:-26840 Msa1454150:CDS
TTCAAGCACAAACACGACCT+CGG 0.628811 tig0035057:+27096 None:intergenic
CACTCACCCACGCGCCACCG+AGG 0.654415 tig0035057:-27113 Msa1454150:CDS
TATGTTGGAGGAGAAATCAG+AGG 0.658115 tig0035057:+27276 None:intergenic
GAACGGATTCACTTGCAAAG+AGG 0.660744 tig0035057:-27314 Msa1454150:CDS
ATATCGAAGACAATTAGCAA+GGG 0.660966 tig0035057:-27031 Msa1454150:CDS
AGGATTGACTATGCCCCAGG+TGG 0.697092 tig0035057:-27151 Msa1454150:CDS
AAGCACAAACACGACCTCGG+TGG 0.701480 tig0035057:+27099 None:intergenic
ATTGTCTGGAACAGAAGGTG+TGG 0.719167 tig0035057:+26877 None:intergenic
TTGACCAAGACATTCCAGGT+GGG 0.732755 tig0035057:-26851 Msa1454150:CDS
GTTGACCAAGACATTCCAGG+TGG 0.742504 tig0035057:-26852 Msa1454150:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
ATATCGAAGACAATTAGCAA+GGG - tig0035057:27096-27115 Msa1454150:CDS 30.0%
CATATCGAAGACAATTAGCA+AGG - tig0035057:27095-27114 Msa1454150:CDS 35.0%
!! GTTCTTTTGGAAGTGAACTA+AGG + tig0035057:27145-27164 None:intergenic 35.0%
! GTACATTGGCATTGTTCTTT+TGG + tig0035057:27158-27177 None:intergenic 35.0%
! CTTGATTTTCTCAACCTCTT+TGG + tig0035057:27304-27323 None:intergenic 35.0%
AGGTTGAGAAAATCAAGTCT+AGG - tig0035057:27307-27326 Msa1454150:CDS 35.0%
!! GAAATCAGAGGCATTTACCT+TGG + tig0035057:26842-26861 None:intergenic 40.0%
TATGTTGGAGGAGAAATCAG+AGG + tig0035057:26854-26873 None:intergenic 40.0%
TTGAAGGGCAACTAGATGTT+GGG - tig0035057:27049-27068 Msa1454150:CDS 40.0%
TGTCTTCGATATGAGCACAT+TGG + tig0035057:27088-27107 None:intergenic 40.0%
! GGAAGTGAACTAAGGCTTTT+GGG + tig0035057:27137-27156 None:intergenic 40.0%
! TGGAAGTGAACTAAGGCTTT+TGG + tig0035057:27138-27157 None:intergenic 40.0%
TGCAAACAAGGTAGTAGCAA+TGG + tig0035057:27229-27248 None:intergenic 40.0%
! AACACATTGTCTGGAACAGA+AGG + tig0035057:27258-27277 None:intergenic 40.0%
! GAACGGATTCACTTGCAAAG+AGG - tig0035057:26813-26832 Msa1454150:CDS 45.0%
! TGGTTTGGCTAGTATGTTGG+AGG + tig0035057:26866-26885 None:intergenic 45.0%
TCCAACATACTAGCCAAACC+AGG - tig0035057:26865-26884 Msa1454150:CDS 45.0%
!! TCCTGGTTTGGCTAGTATGT+TGG + tig0035057:26869-26888 None:intergenic 45.0%
! AATGTGTTGTTGGTGCTTCC+TGG + tig0035057:26886-26905 None:intergenic 45.0%
!! GGAAGCACCAACAACACATT+TGG - tig0035057:26886-26905 Msa1454150:CDS 45.0%
CACTGAGCCAAATGTGTTGT+TGG + tig0035057:26896-26915 None:intergenic 45.0%
! CAACAACACATTTGGCTCAG+TGG - tig0035057:26894-26913 Msa1454150:CDS 45.0%
TCCTGGAACTTTCTGAACGT+TGG + tig0035057:26929-26948 None:intergenic 45.0%
TTCAAGCACAAACACGACCT+CGG + tig0035057:27034-27053 None:intergenic 45.0%
AGGTCGTGTTTGTGCTTGAA+GGG - tig0035057:27034-27053 Msa1454150:CDS 45.0%
CTTGAAGGGCAACTAGATGT+TGG - tig0035057:27048-27067 Msa1454150:CDS 45.0%
AAGAACAGCAGCAGGTACAT+TGG + tig0035057:27172-27191 None:intergenic 45.0%
AATGCAGAAAGAACAGCAGC+AGG + tig0035057:27180-27199 None:intergenic 45.0%
! ATTGTCTGGAACAGAAGGTG+TGG + tig0035057:27253-27272 None:intergenic 45.0%
GTCTTGGTCAACACATTGTC+TGG + tig0035057:27267-27286 None:intergenic 45.0%
! TGTGTTGACCAAGACATTCC+AGG - tig0035057:27272-27291 Msa1454150:CDS 45.0%
TTGACCAAGACATTCCAGGT+GGG - tig0035057:27276-27295 Msa1454150:CDS 45.0%
!! CACTTGCAAAGAGGCATCCA+AGG - tig0035057:26822-26841 Msa1454150:CDS 50.0%
! GTTGTTGGTGCTTCCTGGTT+TGG + tig0035057:26881-26900 None:intergenic 50.0%
! ACATTTGGCTCAGTGGTGAC+TGG - tig0035057:26901-26920 Msa1454150:CDS 50.0%
GCCAACGTTCAGAAAGTTCC+AGG - tig0035057:26925-26944 Msa1454150:CDS 50.0%
GTTCCAGGACTCAACACTCT+TGG - tig0035057:26940-26959 Msa1454150:CDS 50.0%
!! ACACCAAGAGTGTTGAGTCC+TGG + tig0035057:26946-26965 None:intergenic 50.0%
! CTCTTGGTGTGTCTCTGTCA+AGG - tig0035057:26956-26975 Msa1454150:CDS 50.0%
TCAAGGATTGACTATGCCCC+AGG - tig0035057:26973-26992 Msa1454150:CDS 50.0%
GAGGTCGTGTTTGTGCTTGA+AGG - tig0035057:27033-27052 Msa1454150:CDS 50.0%
! CGATATGAGCACATTGGCTG+TGG + tig0035057:27082-27101 None:intergenic 50.0%
GCATTCAACAGCCAACTTCC+TGG - tig0035057:27195-27214 Msa1454150:CDS 50.0%
TGGACTGTGTACCAGGAAGT+TGG + tig0035057:27209-27228 None:intergenic 50.0%
!! GTAGCAATGGACTGTGTACC+AGG + tig0035057:27216-27235 None:intergenic 50.0%
! AGAAGGTGTGGCTGCAAACA+AGG + tig0035057:27241-27260 None:intergenic 50.0%
GTTGACCAAGACATTCCAGG+TGG - tig0035057:27275-27294 Msa1454150:CDS 50.0%
ATTCCAGGTGGGTACCAAAG+AGG - tig0035057:27287-27306 Msa1454150:CDS 50.0%
AGGATTGACTATGCCCCAGG+TGG - tig0035057:26976-26995 Msa1454150:CDS 55.0%
AAGCACAAACACGACCTCGG+TGG + tig0035057:27031-27050 None:intergenic 55.0%
GGTACCCACCTGGAATGTCT+TGG + tig0035057:27283-27302 None:intergenic 55.0%
CAACCTCTTTGGTACCCACC+TGG + tig0035057:27293-27312 None:intergenic 55.0%
!! GGTGAGTGTGAGGTGGGTTG+AGG + tig0035057:27002-27021 None:intergenic 60.0%
!! AGGTGGGTTGAGGCCACCTG+GGG + tig0035057:26992-27011 None:intergenic 65.0%
!! GAGGTGGGTTGAGGCCACCT+GGG + tig0035057:26993-27012 None:intergenic 65.0%
!! TGAGGTGGGTTGAGGCCACC+TGG + tig0035057:26994-27013 None:intergenic 65.0%
CGCGTGGGTGAGTGTGAGGT+GGG + tig0035057:27008-27027 None:intergenic 65.0%
GCGCGTGGGTGAGTGTGAGG+TGG + tig0035057:27009-27028 None:intergenic 70.0%
GTGGCGCGTGGGTGAGTGTG+AGG + tig0035057:27012-27031 None:intergenic 70.0%
ACACGACCTCGGTGGCGCGT+GGG + tig0035057:27023-27042 None:intergenic 70.0%
AACACGACCTCGGTGGCGCG+TGG + tig0035057:27024-27043 None:intergenic 70.0%
CACTCACCCACGCGCCACCG+AGG - tig0035057:27014-27033 Msa1454150:CDS 75.0%
Chromosome Type Strat End Strand Name
tig0035057 gene 26805 27344 26805 ID=Msa1454150;Name=Msa1454150
tig0035057 mRNA 26805 27344 26805 ID=Msa1454150-mRNA-1;Parent=Msa1454150;Name=Msa1454150-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|-1|0|1|-1|0|1|0|180
tig0035057 exon 26805 27344 26805 ID=Msa1454150-mRNA-1:exon:19565;Parent=Msa1454150-mRNA-1
tig0035057 CDS 26805 27344 26805 ID=Msa1454150-mRNA-1:cds;Parent=Msa1454150-mRNA-1
Gene Sequence

>Msa1454150

GTAAAAGTGAACGGATTCACTTGCAAAGAGGCATCCAAGGTAAATGCCTCTGATTTCTCCTCCAACATACTAGCCAAACCAGGAAGCACCAACAACACATTTGGCTCAGTGGTGACTGGAGCCAACGTTCAGAAAGTTCCAGGACTCAACACTCTTGGTGTGTCTCTGTCAAGGATTGACTATGCCCCAGGTGGCCTCAACCCACCTCACACTCACCCACGCGCCACCGAGGTCGTGTTTGTGCTTGAAGGGCAACTAGATGTTGGGTTCATAACCACAGCCAATGTGCTCATATCGAAGACAATTAGCAAGGGTGAGATATTTGTGTTCCCAAAAGCCTTAGTTCACTTCCAAAAGAACAATGCCAATGTACCTGCTGCTGTTCTTTCTGCATTCAACAGCCAACTTCCTGGTACACAGTCCATTGCTACTACCTTGTTTGCAGCCACACCTTCTGTTCCAGACAATGTGTTGACCAAGACATTCCAGGTGGGTACCAAAGAGGTTGAGAAAATCAAGTCTAGGCTTGCACCCAAAAAG
Protein sequence

>Msa1454150

VKVNGFTCKEASKVNASDFSSNILAKPGSTNNTFGSVVTGANVQKVPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGQLDVGFITTANVLISKTISKGEIFVFPKALVHFQKNNANVPAAVLSAFNSQLPGTQSIATTLFAATPSVPDNVLTKTFQVGTKEVEKIKSRLAPKK