AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0620000


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0620000 MtrunA17_Chr8g0385651 99.038 416 4 0 1 416 1 416 0.0 856
Msa0620000 MtrunA17_Chr8g0385671 95.673 416 18 0 1 416 1 416 0.0 829
Msa0620000 MtrunA17_Chr2g0320251 45.115 348 186 4 45 388 84 430 1.13e-101 309
Msa0620000 MtrunA17_Chr4g0028201 42.737 358 200 4 35 388 92 448 1.88e-101 309
Msa0620000 MtrunA17_Chr7g0265461 27.635 351 206 12 49 384 72 389 5.28e-32 125
Msa0620000 MtrunA17_Chr4g0055991 28.857 350 208 12 50 384 204 527 1.04e-31 126
Msa0620000 MtrunA17_Chr1g0179651 28.161 348 209 12 49 384 12 330 2.68e-31 122
Msa0620000 MtrunA17_Chr7g0265451 26.857 350 210 9 49 384 189 506 5.75e-31 124
Msa0620000 MtrunA17_Chr5g0411991 28.021 389 221 13 19 384 54 406 1.35e-29 119
Msa0620000 MtrunA17_Chr7g0265381 27.920 351 204 13 50 384 48 365 8.85e-29 115
Msa0620000 MtrunA17_Chr3g0137491 28.671 286 173 8 102 384 125 382 2.22e-28 115
Msa0620000 MtrunA17_Chr3g0119721 26.688 311 200 8 81 384 46 335 4.63e-28 113
Msa0620000 MtrunA17_Chr1g0197381 28.479 309 181 10 96 392 268 548 6.96e-28 115
Msa0620000 MtrunA17_Chr4g0064411 27.152 302 195 8 90 384 170 453 1.17e-27 114
Msa0620000 MtrunA17_Chr3g0120131 26.019 319 192 9 81 384 184 473 3.24e-27 113
Msa0620000 MtrunA17_Chr3g0131051 27.374 358 196 14 50 384 166 482 3.88e-27 113
Msa0620000 MtrunA17_Chr3g0140131 27.907 344 213 10 50 384 268 585 7.90e-27 112
Msa0620000 MtrunA17_Chr4g0064461 26.769 325 193 10 67 384 170 456 6.53e-26 109
Msa0620000 MtrunA17_Chr1g0146181 28.371 356 198 14 49 384 260 578 7.35e-25 107
Msa0620000 MtrunA17_Chr8g0390121 27.095 358 199 14 50 384 283 601 1.67e-24 105
Msa0620000 MtrunA17_Chr3g0140141 28.221 326 194 11 73 384 244 543 5.53e-24 104
Msa0620000 MtrunA17_Chr4g0064471 23.055 347 228 9 41 384 151 461 2.14e-23 102
Msa0620000 MtrunA17_Chr1g0173651 25.000 348 202 11 52 341 356 702 6.28e-23 101
Msa0620000 MtrunA17_Chr7g0253441 25.081 307 204 8 77 381 187 469 7.05e-21 94.7
Msa0620000 MtrunA17_Chr4g0039811 27.809 356 205 14 50 372 112 448 6.47e-19 88.6
Msa0620000 MtrunA17_Chr6g0460631 23.483 379 230 11 50 389 113 470 4.79e-18 86.3
Msa0620000 MtrunA17_Chr3g0092341 24.372 398 232 10 36 388 101 474 5.18e-16 79.7
Msa0620000 MtrunA17_Chr1g0200871 25.085 295 168 10 142 401 195 471 4.55e-13 70.9
Msa0620000 MtrunA17_Chr5g0421571 31.757 148 91 3 19 159 107 251 5.03e-13 69.7
Msa0620000 MtrunA17_Chr7g0254391 22.549 306 212 6 92 389 187 475 7.80e-13 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0620000 AT5G61840.1 91.133 406 35 1 11 416 11 415 0.0 775
Msa0620000 AT1G27440.1 88.279 401 46 1 16 416 13 412 0.0 746
Msa0620000 AT5G22940.1 42.179 358 200 4 50 400 109 466 1.15e-100 308
Msa0620000 AT5G22940.2 42.179 358 200 4 50 400 138 495 1.88e-100 308
Msa0620000 AT2G28110.1 42.897 359 196 6 42 394 86 441 4.59e-99 303
Msa0620000 AT5G37000.1 29.568 301 175 10 96 384 268 543 1.15e-31 127
Msa0620000 AT5G03795.1 30.286 350 207 13 49 388 189 511 5.29e-31 124
Msa0620000 AT4G38040.1 29.143 350 198 12 49 384 103 416 8.56e-31 122
Msa0620000 AT4G16745.1 29.179 329 193 13 73 384 218 523 7.95e-30 121
Msa0620000 AT5G11130.2 29.043 303 188 8 89 384 41 323 8.43e-30 118
Msa0620000 AT4G38040.2 30.225 311 169 10 49 345 103 379 2.00e-29 119
Msa0620000 AT5G11130.1 29.043 303 188 8 89 384 185 467 6.55e-29 118
Msa0620000 AT4G32790.1 27.954 347 212 13 49 384 266 585 5.14e-28 116
Msa0620000 AT4G32790.3 27.954 347 212 13 49 384 266 585 5.14e-28 116
Msa0620000 AT4G32790.2 27.954 347 212 13 49 384 266 585 5.14e-28 116
Msa0620000 AT5G25310.1 28.531 354 202 14 49 384 150 470 5.14e-28 115
Msa0620000 AT5G11610.1 27.457 346 212 9 50 384 220 537 5.57e-28 116
Msa0620000 AT4G16745.2 29.392 296 175 10 73 353 218 494 1.11e-27 115
Msa0620000 AT5G25820.1 28.693 352 203 15 50 384 324 644 1.26e-27 115
Msa0620000 AT3G42180.4 27.362 307 191 10 89 384 45 330 7.21e-26 107
Msa0620000 AT5G20260.1 26.689 296 191 7 96 384 48 324 2.03e-25 106
Msa0620000 AT5G20260.3 26.689 296 191 7 96 384 75 351 2.67e-25 106
Msa0620000 AT3G42180.1 27.362 307 191 10 89 384 174 459 3.05e-25 107
Msa0620000 AT5G19670.1 26.857 350 210 14 50 384 281 599 6.59e-25 107
Msa0620000 AT5G19670.2 26.857 350 210 14 50 384 281 599 6.59e-25 107
Msa0620000 AT5G20260.2 26.689 296 191 7 96 384 180 456 1.27e-24 105
Msa0620000 AT5G33290.1 29.699 266 156 10 126 384 248 489 6.12e-24 103
Msa0620000 AT3G07620.1 26.821 302 187 9 93 384 172 449 2.19e-23 102
Msa0620000 AT5G16890.1 25.424 354 216 12 50 372 118 454 3.40e-21 95.9
Msa0620000 AT1G67410.1 24.934 377 230 11 50 390 53 412 6.18e-21 94.7
Msa0620000 AT3G45400.1 25.325 308 205 9 90 389 151 441 9.79e-15 76.3
Msa0620000 AT2G35100.1 24.156 385 216 19 49 389 59 411 1.08e-14 75.9
Msa0620000 AT3G03650.1 24.528 318 198 10 90 389 190 483 1.69e-14 75.5
Msa0620000 AT1G74680.1 22.917 384 231 11 50 389 75 437 4.44e-13 71.2

Find 193 sgRNAs with CRISPR-Local

Find 905 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTTCAAATTGGCCTTAT+TGG 0.102741 4_2:+71321469 Msa0620000:CDS
TGATTACCACTTTATTATTT+TGG 0.154260 4_2:+71323418 Msa0620000:three_prime_UTR
ACCGACCCCTATGAACATTT+TGG 0.163679 4_2:-71322880 None:intergenic
AATCAGCTTCTTCAGGATTA+AGG 0.174499 4_2:-71321347 None:intergenic
AAAACTGCTACCAAGGTTTA+AGG 0.176700 4_2:-71322808 None:intergenic
ATCTCCTGATTGTGCGGGTT+GGG 0.180030 4_2:-71322675 None:intergenic
CAACCTACTGAAAGAATTTC+AGG 0.205977 4_2:+71318301 Msa0620000:CDS
TTGTGGTTCCTCATGACTTT+GGG 0.215552 4_2:+71321520 Msa0620000:CDS
CATATCATAGCTTGTTGTTT+TGG 0.231738 4_2:+71323192 Msa0620000:three_prime_UTR
CATCATTCGAGGCGACTTAA+AGG 0.233456 4_2:-71321427 None:intergenic
TACAACTTATTTCTTCAAAT+TGG 0.241087 4_2:+71321460 Msa0620000:CDS
GTGTCTGTGTGTGTGGATTT+AGG 0.251600 4_2:+71323259 Msa0620000:three_prime_UTR
GCTACCTTGGTTCAAACATT+TGG 0.286641 4_2:+71321730 Msa0620000:CDS
AACATTGCTTGCTTCATAGA+AGG 0.295573 4_2:-71322647 None:intergenic
GCCTTCCATCAAGTTCTAAA+TGG 0.295689 4_2:+71322698 Msa0620000:CDS
AAAATGGGTATTTGGAAATT+GGG 0.306965 4_2:+71318214 Msa0620000:exon
GAGAGTAGCGAAGTTGAAAA+TGG 0.315479 4_2:-71310999 None:intergenic
TCCTGCTAAAATCTAAATAC+TGG 0.321872 4_2:-71323336 None:intergenic
TTGGATTCAAGCTTGTCTTT+AGG 0.328560 4_2:+71323360 Msa0620000:three_prime_UTR
AGCGGTGTGGGAGAACTTTA+AGG 0.332947 4_2:+71322322 Msa0620000:CDS
ATCAGCTTCTTCAGGATTAA+GGG 0.335863 4_2:-71321346 None:intergenic
GTGGGAGATTTCTTAGAAAT+GGG 0.337748 4_2:-71311114 None:intergenic
AACATATGGGTTAGGCATCT+TGG 0.349568 4_2:-71321273 None:intergenic
CAAGTCCATTTAGAACTTGA+TGG 0.350985 4_2:-71322703 None:intergenic
TCTCCTGATTGTGCGGGTTG+GGG 0.353405 4_2:-71322674 None:intergenic
AGATCAATCATGTAGCAAAT+TGG 0.353942 4_2:-71322976 None:intergenic
TAAAACCAATCAGCTTCTTC+AGG 0.355917 4_2:-71321354 None:intergenic
ACCACAGCTTCAACCAATCT+TGG 0.366518 4_2:-71322449 None:intergenic
TGTGGGAGATTTCTTAGAAA+TGG 0.366861 4_2:-71311115 None:intergenic
TTGGTTGAAGCTGTGGTATT+TGG 0.367168 4_2:+71322455 Msa0620000:CDS
TTTGTGGTTCCTCATGACTT+TGG 0.372681 4_2:+71321519 Msa0620000:CDS
AGATCTCAGCAGCAAACATA+TGG 0.376928 4_2:-71321287 None:intergenic
CTTGCATAATAACCACCTTC+AGG 0.377203 4_2:-71321904 None:intergenic
CTACCTTGGTTCAAACATTT+GGG 0.381929 4_2:+71321731 Msa0620000:CDS
GCTGCTGCGGCGTGCTACCT+TGG 0.382050 4_2:+71321717 Msa0620000:CDS
TGTTTCCTTAGTATAACTTC+TGG 0.382496 4_2:-71322608 None:intergenic
CCCTCTGTTCGGTTCCAATA+AGG 0.384026 4_2:-71321483 None:intergenic
AAGTCACAGGTGGTGTATAC+AGG 0.384394 4_2:-71321381 None:intergenic
CTTCTTCAGGATTAAGGGTT+CGG 0.385048 4_2:-71321341 None:intergenic
TAGCTGGAAGGAAAGGGAAA+TGG 0.387658 4_2:-71311078 None:intergenic
GAGGGGTATTGTAATTGTGT+GGG 0.391814 4_2:-71310920 None:intergenic
TTATGATTCTTTATATGTCT+TGG 0.402929 4_2:+71322847 Msa0620000:three_prime_UTR
ACCTGTGACTTGACACCAAA+TGG 0.407155 4_2:+71321393 Msa0620000:CDS
TTTCTTGTTCTGATGATAGT+TGG 0.408620 4_2:+71323104 Msa0620000:three_prime_UTR
CATCTCCTGATTGTGCGGGT+TGG 0.410206 4_2:-71322676 None:intergenic
ATATCATCGGCAATAATAAC+AGG 0.410609 4_2:-71322485 None:intergenic
TTCAACCAATCTTGGGCTCC+AGG 0.410705 4_2:-71322441 None:intergenic
ATTTGAAGAAATAAGTTGTA+TGG 0.413913 4_2:-71321457 None:intergenic
GATATGCTTGAAGTCTCAAT+TGG 0.414862 4_2:-71323175 None:intergenic
GAAAACAGACACTCCTACTA+AGG 0.414930 4_2:-71323029 None:intergenic
AAGGGTAAAGGGAGGCCATT+TGG 0.417277 4_2:-71321408 None:intergenic
AGAGGGGTATTGTAATTGTG+TGG 0.419310 4_2:-71310921 None:intergenic
CAAGGTTTAAGGTCGCCAAC+AGG 0.419697 4_2:-71322797 None:intergenic
GTGTGGATTTAGGTTAGGTT+AGG 0.419775 4_2:+71323269 Msa0620000:three_prime_UTR
CAAATTTAGTCAACAGAAGA+AGG 0.421111 4_2:-71311168 None:intergenic
CAATACCGTGGGAAGAGATC+GGG 0.421402 4_2:+71322528 Msa0620000:CDS
AGCTGGAAGGAAAGGGAAAT+GGG 0.425156 4_2:-71311077 None:intergenic
ACATATGGGTTAGGCATCTT+GGG 0.425565 4_2:-71321272 None:intergenic
TCTTAGAAATGGGGTTTCAA+TGG 0.428869 4_2:-71311104 None:intergenic
ATCCTCCCCAAAATGTTCAT+AGG 0.429719 4_2:+71322873 Msa0620000:three_prime_UTR
TTTCTCTTGTGTCACGGCAT+TGG 0.430557 4_2:+71323048 Msa0620000:three_prime_UTR
AGGTGCAAGAGCAGCGGTGT+GGG 0.432542 4_2:+71322310 Msa0620000:CDS
TTGGAAAATAAGAGTCATAA+TGG 0.441627 4_2:+71323067 Msa0620000:three_prime_UTR
AAGGGGAGAAGAGCTTGAAT+TGG 0.443074 4_2:+71322765 Msa0620000:CDS
TGGTGGGATCGATGTGAGTA+TGG 0.450775 4_2:-71322588 None:intergenic
TGTGTGTGTGGATTTAGGTT+AGG 0.451242 4_2:+71323264 Msa0620000:three_prime_UTR
TTAATCCTGAAGAAGCTGAT+TGG 0.455161 4_2:+71321349 Msa0620000:CDS
ATCATTCGAGGCGACTTAAA+GGG 0.456095 4_2:-71321426 None:intergenic
TTCTGAGAAGCAACAGAGAC+AGG 0.456845 4_2:-71311051 None:intergenic
AGGGAAAGTAGTTGTGTTGT+GGG 0.457301 4_2:-71311132 None:intergenic
TAGTCAACAGAAGAAGGTTA+AGG 0.459446 4_2:-71311162 None:intergenic
CAACCAATCTTGGGCTCCAG+GGG 0.460367 4_2:-71322439 None:intergenic
GGGGTTTCAATGGAATTAGC+TGG 0.462075 4_2:-71311094 None:intergenic
TTGTCTATGCCCACTTGGAT+GGG 0.465656 4_2:+71322415 Msa0620000:CDS
TTTGTCTATGCCCACTTGGA+TGG 0.466748 4_2:+71322414 Msa0620000:CDS
TTAGGAAGAAGTGTCAAATC+TGG 0.467946 4_2:+71323287 Msa0620000:three_prime_UTR
CACGGTATTGCATCGGCAAA+CGG 0.471872 4_2:-71322515 None:intergenic
AAGCTATCTACCACCCTACC+TGG 0.472732 4_2:-71323513 None:intergenic
TCCTCCCCAAAATGTTCATA+GGG 0.473430 4_2:+71322874 Msa0620000:three_prime_UTR
TGCTTGCTTCATAGAAGGGT+TGG 0.477612 4_2:-71322642 None:intergenic
TTCCTTAGTATAACTTCTGG+TGG 0.480532 4_2:-71322605 None:intergenic
TCTAGACTCATACTTGGTAA+TGG 0.480817 4_2:-71321551 None:intergenic
AATGATCGGCTCCCTCTGTT+CGG 0.484122 4_2:-71321494 None:intergenic
TCTAGTTTATTCTCCAGGTA+GGG 0.489257 4_2:+71323500 Msa0620000:three_prime_UTR
GTAATTCTAGTTTATTCTCC+AGG 0.490086 4_2:+71323495 Msa0620000:three_prime_UTR
ATGGAATTAGCTGGAAGGAA+AGG 0.490515 4_2:-71311085 None:intergenic
GAGGCGACTTAAAGGGTAAA+GGG 0.490626 4_2:-71321419 None:intergenic
CGGGGTGTTTGTTGATGAGC+AGG 0.491978 4_2:+71322547 Msa0620000:CDS
AGGTAGTGCTGGTGATGTAT+TGG 0.493276 4_2:+71321170 Msa0620000:intron
ACATTGCTTGCTTCATAGAA+GGG 0.496136 4_2:-71322646 None:intergenic
TTGCATAATAACCACCTTCA+GGG 0.496241 4_2:-71321903 None:intergenic
TGATCCGGTTGGAAGGTTGA+AGG 0.497770 4_2:+71321197 Msa0620000:CDS
GGGAGCCGATCATTTCTTTG+TGG 0.498580 4_2:+71321503 Msa0620000:CDS
TGTGGTTCCTCATGACTTTG+GGG 0.499739 4_2:+71321521 Msa0620000:CDS
AATTGGACTGCTGGCCCTGT+TGG 0.500040 4_2:+71322782 Msa0620000:CDS
TGGAATTAGCTGGAAGGAAA+GGG 0.502294 4_2:-71311084 None:intergenic
AAAACCTTCAACCTTCCAAC+CGG 0.502517 4_2:-71321201 None:intergenic
CCACAGCTTCAACCAATCTT+GGG 0.502883 4_2:-71322448 None:intergenic
TCCTTAGTATAACTTCTGGT+GGG 0.503457 4_2:-71322604 None:intergenic
TCAACCAATCTTGGGCTCCA+GGG 0.504298 4_2:-71322440 None:intergenic
CTACCTGAAATTCTTTCAGT+AGG 0.506228 4_2:-71318304 None:intergenic
CTGTTGGCGACCTTAAACCT+TGG 0.507487 4_2:+71322798 Msa0620000:CDS
CAGCAGCAAACATATGGGTT+AGG 0.507985 4_2:-71321281 None:intergenic
TCTCATGAAAGATATTAGTC+TGG 0.508501 4_2:+71323466 Msa0620000:three_prime_UTR
TGTGAGTATGGTATCCAACT+TGG 0.508722 4_2:-71322576 None:intergenic
AGGTAGGGTGGTAGATAGCT+TGG 0.508805 4_2:+71323515 Msa0620000:three_prime_UTR
TGCTGCAAAAGAAGTAGTAA+AGG 0.509311 4_2:-71318155 None:intergenic
GACTGTTAAAACTGCTACCA+AGG 0.509613 4_2:-71322815 None:intergenic
CTGCTGAGATCTTTATGCAC+CGG 0.510746 4_2:+71321298 Msa0620000:CDS
GCCATTTGGTGTCAAGTCAC+AGG 0.510932 4_2:-71321394 None:intergenic
AGGGGTATTGTAATTGTGTG+GGG 0.512295 4_2:-71310919 None:intergenic
CGAGGCGACTTAAAGGGTAA+AGG 0.512868 4_2:-71321420 None:intergenic
CTCCTGATTGTGCGGGTTGG+GGG 0.514631 4_2:-71322673 None:intergenic
GCAATACCGTGGGAAGAGAT+CGG 0.515153 4_2:+71322527 Msa0620000:CDS
GCTGCAAAAGAAGTAGTAAA+GGG 0.516288 4_2:-71318154 None:intergenic
TCTGGCTTGCTTAGAAGAAA+CGG 0.518888 4_2:+71323305 Msa0620000:three_prime_UTR
TGGTTCAAACATTTGGGCAG+AGG 0.523047 4_2:+71321737 Msa0620000:CDS
AAGAGCTTGAATTGGACTGC+TGG 0.524717 4_2:+71322773 Msa0620000:CDS
CACGGAAGTTGCCACATGAC+AGG 0.525758 4_2:+71322726 Msa0620000:CDS
GAACTAATTGTAGGTAGTGC+TGG 0.526058 4_2:+71321159 Msa0620000:intron
CAGCGCTAGATAAGAGAAAC+CGG 0.530862 4_2:-71321317 None:intergenic
TAAAGAATCATAATCGCCTC+AGG 0.531284 4_2:-71322837 None:intergenic
AAGAAGGTTAAGGTGTCGTA+AGG 0.533148 4_2:-71311152 None:intergenic
ATGGCACTTCTCATCATTCG+AGG 0.534980 4_2:-71321438 None:intergenic
AAAACTCCAAAATAATAAAG+TGG 0.535449 4_2:-71323424 None:intergenic
TGAGCAGGATGTTCCCAAGT+TGG 0.535887 4_2:+71322562 Msa0620000:CDS
CAACATCATAAAACAGTCCT+CGG 0.537401 4_2:-71321873 None:intergenic
AAGGGAAAGTAGTTGTGTTG+TGG 0.539252 4_2:-71311133 None:intergenic
CCCAAAATGTTCATAGGGGT+CGG 0.539812 4_2:+71322879 Msa0620000:three_prime_UTR
ATGTCCTCGTAATATGTTGT+TGG 0.543592 4_2:-71322377 None:intergenic
TCCCACCAGAAGTTATACTA+AGG 0.543860 4_2:+71322603 Msa0620000:CDS
TTGATGCTGTTGAGCTTCGT+AGG 0.545962 4_2:+71318275 Msa0620000:CDS
CCCAAGATTGGTTGAAGCTG+TGG 0.547702 4_2:+71322448 Msa0620000:CDS
TGGGAGATTTCTTAGAAATG+GGG 0.550635 4_2:-71311113 None:intergenic
TGATGTATTGGAAGATGATC+CGG 0.554892 4_2:+71321182 Msa0620000:CDS
TTCTAGTTTATTCTCCAGGT+AGG 0.556035 4_2:+71323499 Msa0620000:three_prime_UTR
AAGGTAGCACGCCGCAGCAG+CGG 0.559783 4_2:-71321715 None:intergenic
GATCTCAGCAGCAAACATAT+GGG 0.560809 4_2:-71321286 None:intergenic
GAAGAGAAGGCAATTGAAAG+AGG 0.561536 4_2:+71321685 Msa0620000:CDS
GCTAAAATCTAAATACTGGA+AGG 0.562081 4_2:-71323332 None:intergenic
TCCACTATTTGACATTTCGA+CGG 0.565695 4_2:+71322349 Msa0620000:CDS
AGTCACAGGTGGTGTATACA+GGG 0.565897 4_2:-71321380 None:intergenic
GAAGGCATCTCCTGATTGTG+CGG 0.568643 4_2:-71322681 None:intergenic
CTCTTCCCACGGTATTGCAT+CGG 0.576123 4_2:-71322522 None:intergenic
AGGAGTGTATTCTTGAAACA+AGG 0.576573 4_2:+71322746 Msa0620000:CDS
TGGAAGATGATCCGGTTGGA+AGG 0.577407 4_2:+71321190 Msa0620000:CDS
TCCATTTAGAACTTGATGGA+AGG 0.586348 4_2:-71322699 None:intergenic
AATCATGTGTGCTTGAAAGA+TGG 0.587027 4_2:+71321760 Msa0620000:CDS
AGTTTATTCTCCAGGTAGGG+TGG 0.587529 4_2:+71323503 Msa0620000:three_prime_UTR
TTCTGTGGTGGAGCATATGG+AGG 0.588062 4_2:-71321796 None:intergenic
CTGAAGGTGGTTATTATGCA+AGG 0.592317 4_2:+71321905 Msa0620000:CDS
TCCGTCGAAATGTCAAATAG+TGG 0.596017 4_2:-71322350 None:intergenic
AACCAATCTTGGGCTCCAGG+GGG 0.599952 4_2:-71322438 None:intergenic
CCTTATTGGAACCGAACAGA+GGG 0.603172 4_2:+71321483 Msa0620000:CDS
GTGAGTATGGTATCCAACTT+GGG 0.606039 4_2:-71322575 None:intergenic
GAGGGATTCTTCCGCTGCTG+CGG 0.606476 4_2:+71321704 Msa0620000:CDS
GAGGTGCAAGAGCAGCGGTG+TGG 0.609121 4_2:+71322309 Msa0620000:intron
AAGAAGATGAAGATTGACGA+AGG 0.609486 4_2:-71310960 None:intergenic
AGGAACCACAAAGAAATGAT+CGG 0.611291 4_2:-71321508 None:intergenic
AAGAGAAGGCAATTGAAAGA+GGG 0.624340 4_2:+71321686 Msa0620000:CDS
TTCATAGGGGTCGGTAACCG+AGG 0.626269 4_2:+71322888 Msa0620000:three_prime_UTR
AAGGTTTAAGGTCGCCAACA+GGG 0.626386 4_2:-71322796 None:intergenic
GGGTCTTATCAGGAATCAAG+TGG 0.630713 4_2:-71321828 None:intergenic
AAGTTCTAAATGGACTTGCA+CGG 0.631519 4_2:+71322708 Msa0620000:CDS
AAGGCATCTCCTGATTGTGC+GGG 0.633255 4_2:-71322680 None:intergenic
TGGTGGAGCATATGGAGGAA+TGG 0.634234 4_2:-71321791 None:intergenic
GCCTTATTGGAACCGAACAG+AGG 0.636673 4_2:+71321482 Msa0620000:CDS
AAACGGTAGAACAATATCAT+CGG 0.636948 4_2:-71322498 None:intergenic
AGAGACAGGTTAGAAGAGTG+AGG 0.637698 4_2:-71311037 None:intergenic
ATTTGGTGTCAAGTCACAGG+TGG 0.641622 4_2:-71321391 None:intergenic
AAGAATACACTCCTGTCATG+TGG 0.646047 4_2:-71322737 None:intergenic
AGAAGGTTAAGGTGTCGTAA+GGG 0.647502 4_2:-71311151 None:intergenic
CTGCCCAAATGTTTGAACCA+AGG 0.647947 4_2:-71321734 None:intergenic
AAGTTGAAAATGGAAGAGTG+TGG 0.648104 4_2:-71310989 None:intergenic
AACACCCCGATCTCTTCCCA+CGG 0.650716 4_2:-71322533 None:intergenic
GGAGTGTATTCTTGAAACAA+GGG 0.652265 4_2:+71322747 Msa0620000:CDS
GTTTGCCGATGCAATACCGT+GGG 0.652759 4_2:+71322517 Msa0620000:CDS
TAAAGAGAAAAGCAACACAA+AGG 0.657048 4_2:-71318249 None:intergenic
AAACATGCCCCAAAGTCATG+AGG 0.658104 4_2:-71321528 None:intergenic
GGTCTTATCAGGAATCAAGT+GGG 0.661427 4_2:-71321827 None:intergenic
AATACCGTGGGAAGAGATCG+GGG 0.662810 4_2:+71322529 Msa0620000:CDS
TAACAGAGGTGCAAGAGCAG+CGG 0.662972 4_2:+71322304 Msa0620000:intron
AAGTGGGCATAGACAAAACA+CGG 0.670823 4_2:-71322408 None:intergenic
TTTCAATGGAATTAGCTGGA+AGG 0.674164 4_2:-71311090 None:intergenic
CGTTTGCCGATGCAATACCG+TGG 0.699810 4_2:+71322516 Msa0620000:CDS
GCATCCAACAACATATTACG+AGG 0.700041 4_2:+71322373 Msa0620000:CDS
GAGTGTATTCTTGAAACAAG+GGG 0.700993 4_2:+71322748 Msa0620000:CDS
GTTGGAAATGACCCTGAAGG+TGG 0.701807 4_2:+71321892 Msa0620000:CDS
CCTCCCCAAAATGTTCATAG+GGG 0.703947 4_2:+71322875 Msa0620000:three_prime_UTR
GCGACTTAAAGGGTAAAGGG+AGG 0.710948 4_2:-71321416 None:intergenic
GATGTTGGAAATGACCCTGA+AGG 0.717539 4_2:+71321889 Msa0620000:CDS
GTATTGGAAGATGATCCGGT+TGG 0.718257 4_2:+71321186 Msa0620000:CDS
GTCACAGGTGGTGTATACAG+GGG 0.728508 4_2:-71321379 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTAAAATTATCTACA+TGG + chr4_2:71312080-71312099 Msa0620000:intron 10.0%
!!! ATGGATTTTTTTTTTTTTAA+AGG + chr4_2:71316611-71316630 Msa0620000:intron 10.0%
!! TTTGAAAATTTATAATTGTA+CGG + chr4_2:71319179-71319198 Msa0620000:intron 10.0%
!!! TTTTATTATTATTTTGTTTC+AGG + chr4_2:71321663-71321682 Msa0620000:intron 10.0%
!!! TTTTTCTTCCAATAAAAAAT+GGG + chr4_2:71311237-71311256 Msa0620000:intron 15.0%
!! TAAAATTAAAATTGCAAGTT+TGG - chr4_2:71312068-71312087 None:intergenic 15.0%
!!! TATTTTAAGACATATCTTTT+AGG + chr4_2:71312535-71312554 Msa0620000:intron 15.0%
!!! ATTTTAAGACATATCTTTTA+GGG + chr4_2:71312536-71312555 Msa0620000:intron 15.0%
!!! ATTTTCTTGTTATATTTACT+TGG - chr4_2:71312982-71313001 None:intergenic 15.0%
!!! CTTATTTTTATGAACATTTA+GGG - chr4_2:71314586-71314605 None:intergenic 15.0%
!!! CATTGTAAATTTTGATATTT+TGG + chr4_2:71314646-71314665 Msa0620000:intron 15.0%
!!! TCATTTTTCAAATTGTTTAT+TGG + chr4_2:71316234-71316253 Msa0620000:intron 15.0%
!! AAAAAAAAAAATCCATACAA+AGG - chr4_2:71316607-71316626 None:intergenic 15.0%
!! CATAAAATATAATACTGATA+GGG - chr4_2:71316865-71316884 None:intergenic 15.0%
!! TCATAAAATATAATACTGAT+AGG - chr4_2:71316866-71316885 None:intergenic 15.0%
!!! ACTATTTTAAGCAATATTTT+TGG + chr4_2:71316900-71316919 Msa0620000:intron 15.0%
!! TTATAAATTCACAATAAAAG+TGG + chr4_2:71317003-71317022 Msa0620000:intron 15.0%
!!! AAATTTTGAACTTTTTTTTC+TGG + chr4_2:71317392-71317411 Msa0620000:intron 15.0%
!!! AATTTGATAATTTTGTAAAG+AGG + chr4_2:71317591-71317610 Msa0620000:intron 15.0%
!! TAATATAAAGAAGTCAAATT+TGG - chr4_2:71311185-71311204 None:intergenic 15.0%
!!! ATAAAGTTTATTCTTTTCTT+GGG + chr4_2:71318183-71318202 Msa0620000:five_prime_UTR 15.0%
!!! TGATTTGATTATTTTTGTTT+AGG + chr4_2:71318335-71318354 Msa0620000:intron 15.0%
!! TAATCATTGAAATTATAACA+TGG - chr4_2:71318548-71318567 None:intergenic 15.0%
!! GTTATAATTTCAATGATTAA+AGG + chr4_2:71318549-71318568 Msa0620000:intron 15.0%
!! TTTGATGTTTAAATATTAGT+TGG - chr4_2:71318778-71318797 None:intergenic 15.0%
!!! TTCAAAAAACATTTATTTTG+AGG - chr4_2:71319016-71319035 None:intergenic 15.0%
!! TTGAAAATTTATAATTGTAC+GGG + chr4_2:71319180-71319199 Msa0620000:intron 15.0%
!!! ATTGATTATTGATTGAAAAA+AGG + chr4_2:71319360-71319379 Msa0620000:intron 15.0%
!!! TAATAAGAAAATTTTGCAAA+AGG + chr4_2:71321248-71321267 Msa0620000:CDS 15.0%
!!! TAAAATAAAAGTGTGTTATA+TGG - chr4_2:71321648-71321667 None:intergenic 15.0%
!!! ACATTGTAAATTTTGATATA+CGG + chr4_2:71322927-71322946 Msa0620000:three_prime_UTR 15.0%
!!! CATTTTTTATTGGAAGAAAA+AGG - chr4_2:71311238-71311257 None:intergenic 20.0%
!!! CTTTTTCTTCCAATAAAAAA+TGG + chr4_2:71311236-71311255 Msa0620000:intron 20.0%
!!! ATTTCCAAATTCAGTTTTTT+AGG + chr4_2:71311261-71311280 Msa0620000:intron 20.0%
!!! TTTCCAAATTCAGTTTTTTA+GGG + chr4_2:71311262-71311281 Msa0620000:intron 20.0%
!! AAATAAAATGGTGATAATCA+TGG - chr4_2:71311935-71311954 None:intergenic 20.0%
!!! TGATTATCACCATTTTATTT+AGG + chr4_2:71311935-71311954 Msa0620000:intron 20.0%
!! TATCAGAACATATCAAATAA+GGG - chr4_2:71312290-71312309 None:intergenic 20.0%
!! GATCAAGTAATTTAATTCTT+GGG - chr4_2:71312655-71312674 None:intergenic 20.0%
!! TGATCAAGTAATTTAATTCT+TGG - chr4_2:71312656-71312675 None:intergenic 20.0%
!!! ATTTTATTTTCGAGAAATAG+TGG + chr4_2:71312777-71312796 Msa0620000:intron 20.0%
!! ATTTGAAGAAATAAGTTGTA+TGG - chr4_2:71313202-71313221 None:intergenic 20.0%
!!! TACAACTTATTTCTTCAAAT+TGG + chr4_2:71313202-71313221 Msa0620000:intron 20.0%
!!! AACATAAACTATTTTGTTTC+AGG + chr4_2:71313408-71313427 Msa0620000:intron 20.0%
!!! TTTTGTGTCGTTATTAAAAT+TGG + chr4_2:71313826-71313845 Msa0620000:intron 20.0%
!!! ATTGATGACCTAAATAAAAT+TGG + chr4_2:71313880-71313899 Msa0620000:intron 20.0%
!!! TGAACAAACCAATTTTATTT+AGG - chr4_2:71313891-71313910 None:intergenic 20.0%
!!! CCTTATTTTTATGAACATTT+AGG - chr4_2:71314587-71314606 None:intergenic 20.0%
!! CCTAAATGTTCATAAAAATA+AGG + chr4_2:71314584-71314603 Msa0620000:intron 20.0%
!! ATCAAATTTCAAGATTAGAA+TGG + chr4_2:71314842-71314861 Msa0620000:intron 20.0%
!! TCAAATTTCAAGATTAGAAT+GGG + chr4_2:71314843-71314862 Msa0620000:intron 20.0%
!!! TTGAATGACTTTTGTAATAA+TGG + chr4_2:71314950-71314969 Msa0620000:intron 20.0%
!! TCATTGTAACAAAAAAACAA+AGG - chr4_2:71315487-71315506 None:intergenic 20.0%
!! ACTTATAATTGTCAGTATTT+AGG + chr4_2:71315584-71315603 Msa0620000:intron 20.0%
!! CTTATAATTGTCAGTATTTA+GGG + chr4_2:71315585-71315604 Msa0620000:intron 20.0%
!! ATAACTGATATAAGTAACAA+AGG - chr4_2:71316524-71316543 None:intergenic 20.0%
!!! TTATATTTTATGAGTGTGAT+TGG + chr4_2:71316873-71316892 Msa0620000:intron 20.0%
!!! ATCTATATATGCAATTTTAG+TGG + chr4_2:71317171-71317190 Msa0620000:intron 20.0%
!!! CTTTTTGTTTTATCTAAAGT+TGG - chr4_2:71317631-71317650 None:intergenic 20.0%
!!! CATAAAGTTTATTCTTTTCT+TGG + chr4_2:71318182-71318201 Msa0620000:five_prime_UTR 20.0%
!!! TAAAGTTTATTCTTTTCTTG+GGG + chr4_2:71318184-71318203 Msa0620000:five_prime_UTR 20.0%
!! TATTATGAATGTGTTTGATT+AGG + chr4_2:71318467-71318486 Msa0620000:intron 20.0%
!! AATTTCAATGATTAAAGGAT+TGG + chr4_2:71318554-71318573 Msa0620000:intron 20.0%
!! TTAAAACATTTCCTTAGATT+AGG + chr4_2:71318685-71318704 Msa0620000:intron 20.0%
!!! CTTTAGGGTTAATTAATAAT+TGG - chr4_2:71318750-71318769 None:intergenic 20.0%
!!! TTAAAGGTTTGTTAAAAACT+TGG - chr4_2:71318963-71318982 None:intergenic 20.0%
!! TTAGATAGAACATCAATATA+GGG - chr4_2:71319513-71319532 None:intergenic 20.0%
!!! CTCTAAGATACAAATTTTAA+GGG - chr4_2:71319828-71319847 None:intergenic 20.0%
!!! TCTCTAAGATACAAATTTTA+AGG - chr4_2:71319829-71319848 None:intergenic 20.0%
!!! AATTCAGAAATGGAAATTTT+TGG - chr4_2:71320010-71320029 None:intergenic 20.0%
!! AATTTCCATTTCTGAATTAA+TGG + chr4_2:71320012-71320031 Msa0620000:intron 20.0%
!! ATTTCCATTTCTGAATTAAT+GGG + chr4_2:71320013-71320032 Msa0620000:intron 20.0%
!! TAACAAAACATTTCTTAAAC+TGG - chr4_2:71320531-71320550 None:intergenic 20.0%
!!! TAAGCTTCTAAAACAATTAA+TGG - chr4_2:71320724-71320743 None:intergenic 20.0%
!!! TAATAGATTGGTAATTTCTA+AGG + chr4_2:71320905-71320924 Msa0620000:intron 20.0%
!!! TATATATTCTAAGCATTTTG+TGG + chr4_2:71321134-71321153 Msa0620000:intron 20.0%
!!! ATTTTCTTATTATACTTGCT+TGG - chr4_2:71321240-71321259 None:intergenic 20.0%
!! ATTTGAAGAAATAAGTTGTA+TGG - chr4_2:71313202-71313221 None:intergenic 20.0%
!!! TACAACTTATTTCTTCAAAT+TGG + chr4_2:71313202-71313221 Msa0620000:intron 20.0%
!! TTATGATTCTTTATATGTCT+TGG + chr4_2:71322847-71322866 Msa0620000:three_prime_UTR 20.0%
!!! CATTGTAAATTTTGATATAC+GGG + chr4_2:71322928-71322947 Msa0620000:three_prime_UTR 20.0%
!!! TGATTACCACTTTATTATTT+TGG + chr4_2:71323418-71323437 Msa0620000:three_prime_UTR 20.0%
!! AAAACTCCAAAATAATAAAG+TGG - chr4_2:71323427-71323446 None:intergenic 20.0%
!! TTTTTATTGGAAGAAAAAGG+TGG - chr4_2:71311235-71311254 None:intergenic 25.0%
!!! TGGAAATACCCATTTTTTAT+TGG - chr4_2:71311248-71311267 None:intergenic 25.0%
! AAACCCTAAAAAACTGAATT+TGG - chr4_2:71311268-71311287 None:intergenic 25.0%
! CATGGCAAACAAAAAAAAAA+TGG - chr4_2:71311393-71311412 None:intergenic 25.0%
! ATCAACATAACTATAGAACA+TGG - chr4_2:71311411-71311430 None:intergenic 25.0%
!! GGTTTGAATTTTTCATGTTA+TGG + chr4_2:71311456-71311475 Msa0620000:intron 25.0%
! TATTTATTGCATCAATTGAC+TGG + chr4_2:71311556-71311575 Msa0620000:intron 25.0%
! AGTTGCAACTAATATATAAC+TGG - chr4_2:71311966-71311985 None:intergenic 25.0%
!!! ATGGTTGAATTTTTTGAAGA+TGG + chr4_2:71312099-71312118 Msa0620000:intron 25.0%
!! ATCATATCCTGTATTTTTCA+AGG + chr4_2:71312253-71312272 Msa0620000:intron 25.0%
! GTATCAGAACATATCAAATA+AGG - chr4_2:71312291-71312310 None:intergenic 25.0%
! AAAGATAATCCAAGCAAATT+GGG + chr4_2:71312399-71312418 Msa0620000:intron 25.0%
!! CATAACTTTCATGTTTTCAT+TGG - chr4_2:71312458-71312477 None:intergenic 25.0%
! CAATGAAAACATGAAAGTTA+TGG + chr4_2:71312456-71312475 Msa0620000:intron 25.0%
! TGGTAATCTAATATATCCAA+TGG + chr4_2:71312476-71312495 Msa0620000:intron 25.0%
! ATTTAATTCTTGGGTAAAGT+GGG - chr4_2:71312646-71312665 None:intergenic 25.0%
! AATTTAATTCTTGGGTAAAG+TGG - chr4_2:71312647-71312666 None:intergenic 25.0%
!!! TCTTGTGTATTGTTTCTAAT+TGG + chr4_2:71312742-71312761 Msa0620000:intron 25.0%
! TAACAAGAAAATTCTGCAAA+AGG + chr4_2:71312990-71313009 Msa0620000:intron 25.0%
!!! TTCTCAAGATAGCTTTAAAA+TGG - chr4_2:71313347-71313366 None:intergenic 25.0%
! AAGTATACAAAAATAGACCT+GGG - chr4_2:71313598-71313617 None:intergenic 25.0%
! AAAGTATACAAAAATAGACC+TGG - chr4_2:71313599-71313618 None:intergenic 25.0%
!!! TCTATTTTTGTATACTTTCG+AGG + chr4_2:71313601-71313620 Msa0620000:intron 25.0%
!! TGTGATTTTCAATTTTACAG+AGG + chr4_2:71313992-71314011 Msa0620000:intron 25.0%
! TATCATCTGCAATAATAACA+GGG - chr4_2:71314189-71314208 None:intergenic 25.0%
! ATATCATCTGCAATAATAAC+AGG - chr4_2:71314190-71314209 None:intergenic 25.0%
! TGTTTCCTTAATATAACTTC+TGG - chr4_2:71314313-71314332 None:intergenic 25.0%
!! TAGGATAATTTTACATGTCT+TGG + chr4_2:71314552-71314571 Msa0620000:intron 25.0%
!! ATTTTTATGAACATTTAGGG+AGG - chr4_2:71314583-71314602 None:intergenic 25.0%
! ATGTTCATAAAAATAAGGCT+TGG + chr4_2:71314589-71314608 Msa0620000:intron 25.0%
! CATACTAGATTAGGTAATTT+GGG + chr4_2:71314780-71314799 Msa0620000:intron 25.0%
! GATTCATTAATATGAACACA+TGG - chr4_2:71314920-71314939 None:intergenic 25.0%
!!! ACTTTTGTAATAATGGAAGT+TGG + chr4_2:71314957-71314976 Msa0620000:intron 25.0%
!!! CTTCTAATTCTAGAATTGAT+TGG + chr4_2:71315055-71315074 Msa0620000:intron 25.0%
!! TTCTGATGTGAAAATTTTGT+TGG - chr4_2:71315142-71315161 None:intergenic 25.0%
!!! CATTCAATTTTAGTTAACCA+AGG - chr4_2:71315214-71315233 None:intergenic 25.0%
! CTTGGTTAACTAAAATTGAA+TGG + chr4_2:71315212-71315231 Msa0620000:intron 25.0%
!!! TGATTAGTTTCCAAATCTAT+CGG - chr4_2:71315268-71315287 None:intergenic 25.0%
!!! ATGGATTTTCTTTTTTGAGA+AGG - chr4_2:71315311-71315330 None:intergenic 25.0%
! CAAAGGTTTAAAGAAATGAA+AGG - chr4_2:71315470-71315489 None:intergenic 25.0%
!! CGACTTGTAATTTTTCTTTT+AGG + chr4_2:71315551-71315570 Msa0620000:intron 25.0%
!! AACTATCTATAGTTCAAGTT+CGG - chr4_2:71315737-71315756 None:intergenic 25.0%
! TTAAAGGAAATGAAGTTGTT+AGG - chr4_2:71315985-71316004 None:intergenic 25.0%
!! AGAGAAAACGTTTTATGTTT+TGG - chr4_2:71316032-71316051 None:intergenic 25.0%
! AGAACCATAATAAGATGATA+TGG + chr4_2:71316102-71316121 Msa0620000:intron 25.0%
! AAAGTAGATTACTAACATCA+TGG - chr4_2:71316275-71316294 None:intergenic 25.0%
! ACTTAAATGTTTACTCCTTT+AGG - chr4_2:71316362-71316381 None:intergenic 25.0%
! TAAATTCACAATAAAAGTGG+AGG + chr4_2:71317006-71317025 Msa0620000:intron 25.0%
!!! AAATTCTGAAATTGTTACGT+TGG - chr4_2:71317061-71317080 None:intergenic 25.0%
!! GATTTTATTGCAAACATGTT+TGG - chr4_2:71317466-71317485 None:intergenic 25.0%
! AGAATACTGAAACTTATAGT+TGG + chr4_2:71317535-71317554 Msa0620000:intron 25.0%
! AAAGAAACAGAGTTGAAAAA+TGG - chr4_2:71317994-71318013 None:intergenic 25.0%
! GAACTAAAAAAATGGGTATT+TGG + chr4_2:71318206-71318225 Msa0620000:exon 25.0%
! AAAAATGGGTATTTGGAAAT+TGG + chr4_2:71318213-71318232 Msa0620000:exon 25.0%
! AAAATGGGTATTTGGAAATT+GGG + chr4_2:71318214-71318233 Msa0620000:exon 25.0%
!!! TATTTGGAAATTGGGTTTTT+TGG + chr4_2:71318222-71318241 Msa0620000:CDS 25.0%
!!! ATTTGGAAATTGGGTTTTTT+GGG + chr4_2:71318223-71318242 Msa0620000:CDS 25.0%
! GATTGTGATCAATTTCTTTA+TGG + chr4_2:71318372-71318391 Msa0620000:intron 25.0%
! TGATCAATTTCTTTATGGTT+AGG + chr4_2:71318377-71318396 Msa0620000:intron 25.0%
! AATTTGATTGCTTCATGTTA+TGG + chr4_2:71318415-71318434 Msa0620000:intron 25.0%
!! AATGCTGTGTCTTTAATTTA+TGG + chr4_2:71318443-71318462 Msa0620000:intron 25.0%
!! CAATACTGTAACTACAATTT+TGG + chr4_2:71318635-71318654 Msa0620000:intron 25.0%
!!! TTGGTAGAACTTTTTTTTGT+TGG + chr4_2:71318654-71318673 Msa0620000:intron 25.0%
! TATTAGTTGGATGAACTTTA+GGG - chr4_2:71318765-71318784 None:intergenic 25.0%
! ATATTAGTTGGATGAACTTT+AGG - chr4_2:71318766-71318785 None:intergenic 25.0%
!!! CATTTATTTTGAGGTAAAGT+GGG - chr4_2:71319007-71319026 None:intergenic 25.0%
!!! ACATTTATTTTGAGGTAAAG+TGG - chr4_2:71319008-71319027 None:intergenic 25.0%
!! AAGTGAATCATATTTTGCAT+AGG + chr4_2:71319043-71319062 Msa0620000:intron 25.0%
! AATATATTTCGAATGCTCAT+TGG - chr4_2:71319275-71319294 None:intergenic 25.0%
! AACCTGAATTAACATAGAAA+AGG + chr4_2:71319336-71319355 Msa0620000:intron 25.0%
!! TTCCTTTTCTATGTTAATTC+AGG - chr4_2:71319341-71319360 None:intergenic 25.0%
! GTTAGATAGAACATCAATAT+AGG - chr4_2:71319514-71319533 None:intergenic 25.0%
!!! AAGAAATGTTTTGTTACAAC+AGG + chr4_2:71320535-71320554 Msa0620000:intron 25.0%
!!! AGAAATGTTTTGTTACAACA+GGG + chr4_2:71320536-71320555 Msa0620000:intron 25.0%
!!! CATTTTAGAATCATACTTTC+AGG - chr4_2:71320688-71320707 None:intergenic 25.0%
! AAAATTGGAGGAAGATTATT+CGG - chr4_2:71320786-71320805 None:intergenic 25.0%
!! TAATTTCTAAGGAATTCCTA+AGG + chr4_2:71320916-71320935 Msa0620000:intron 25.0%
!!! TTCTTGTGTTCTATTTTAGA+AGG + chr4_2:71321007-71321026 Msa0620000:intron 25.0%
!! TTTTTATAGCAAAACAGACT+CGG + chr4_2:71322234-71322253 Msa0620000:intron 25.0%
! TTACAATGTCCACAAAAAAA+GGG - chr4_2:71322916-71322935 None:intergenic 25.0%
! TTTACAATGTCCACAAAAAA+AGG - chr4_2:71322917-71322936 None:intergenic 25.0%
! TTGGAAAATAAGAGTCATAA+TGG + chr4_2:71323067-71323086 Msa0620000:three_prime_UTR 25.0%
!!! ATTTAGATTTTAGCAGGATT+TGG + chr4_2:71323341-71323360 Msa0620000:three_prime_UTR 25.0%
CAAATTTAGTCAACAGAAGA+AGG - chr4_2:71311171-71311190 None:intergenic 30.0%
! TTGAGGTTGATTAGGAATTT+AGG + chr4_2:71311532-71311551 Msa0620000:intron 30.0%
!!! GAGACTCGTTTTTTAAGAAA+AGG + chr4_2:71311770-71311789 Msa0620000:intron 30.0%
GCAACTAATATATAACTGGA+AGG - chr4_2:71311962-71311981 None:intergenic 30.0%
ATGATGAGCTAAAGAAGTAA+TGG - chr4_2:71312039-71312058 None:intergenic 30.0%
TAAGAGACATGTTCTTAGTT+TGG + chr4_2:71312158-71312177 Msa0620000:intron 30.0%
ATACAGGATATGATACGTTT+AGG - chr4_2:71312247-71312266 None:intergenic 30.0%
!!! ATCCTGTATTTTTCAAGGAA+TGG + chr4_2:71312258-71312277 Msa0620000:intron 30.0%
! AACTAGTTTAAGAGTTTGGA+AGG + chr4_2:71312348-71312367 Msa0620000:intron 30.0%
TTTGCTTGGATTATCTTTGA+AGG - chr4_2:71312397-71312416 None:intergenic 30.0%
CAAAGATAATCCAAGCAAAT+TGG + chr4_2:71312398-71312417 Msa0620000:intron 30.0%
GGGATCTTAGGATAATTAAT+AGG + chr4_2:71312419-71312438 Msa0620000:intron 30.0%
TTTAATTCTTGGGTAAAGTG+GGG - chr4_2:71312645-71312664 None:intergenic 30.0%
TTAGAAACAATACACAAGAC+TGG - chr4_2:71312741-71312760 None:intergenic 30.0%
AGAGATTACTAAGCATATTG+TGG + chr4_2:71312876-71312895 Msa0620000:intron 30.0%
!! TTTCTTCAAATTGGCCTTAT+TGG + chr4_2:71313211-71313230 Msa0620000:intron 30.0%
TATATACTAGATCTCGTACT+TGG - chr4_2:71313302-71313321 None:intergenic 30.0%
!! TATTTTGTTTCAGGAAGAGA+AGG + chr4_2:71313417-71313436 Msa0620000:intron 30.0%
! GATTTTATCAGGAATTAGGT+GGG - chr4_2:71313575-71313594 None:intergenic 30.0%
AGTATACAAAAATAGACCTG+GGG - chr4_2:71313597-71313616 None:intergenic 30.0%
ATAATCCTGACTATTCAAAC+TGG + chr4_2:71313968-71313987 Msa0620000:intron 30.0%
TCAGTAGAAATGTCAAATAG+TGG - chr4_2:71314055-71314074 None:intergenic 30.0%
TGTCCTCATAATATGTTGTT+GGG - chr4_2:71314081-71314100 None:intergenic 30.0%
ATGTCCTCATAATATGTTGT+TGG - chr4_2:71314082-71314101 None:intergenic 30.0%
TCCTTAATATAACTTCTGGT+CGG - chr4_2:71314309-71314328 None:intergenic 30.0%
! ACAGTTGTAGTAGTTTTCTT+AGG + chr4_2:71314525-71314544 Msa0620000:intron 30.0%
! AGTAGTTTTCTTAGGTGATT+AGG + chr4_2:71314533-71314552 Msa0620000:intron 30.0%
GCATACTAGATTAGGTAATT+TGG + chr4_2:71314779-71314798 Msa0620000:intron 30.0%
! TGGATAATCAAAGTATTCTC+AGG + chr4_2:71314812-71314831 Msa0620000:intron 30.0%
! ATAATCAAAGTATTCTCAGG+TGG + chr4_2:71314815-71314834 Msa0620000:intron 30.0%
!!! CAATTTTAGTTAACCAAGGT+TGG - chr4_2:71315210-71315229 None:intergenic 30.0%
!!! CTTTTTTGAGAAGGCAATTA+TGG - chr4_2:71315302-71315321 None:intergenic 30.0%
!!! ACTATGTCACTTGTTTTTGA+AGG + chr4_2:71315507-71315526 Msa0620000:intron 30.0%
! TATAGATAGTTCGATTCGTT+TGG + chr4_2:71315746-71315765 Msa0620000:intron 30.0%
GAAAATGGGATAACGATTAA+AGG - chr4_2:71316001-71316020 None:intergenic 30.0%
! TTTTGGTGGAATTGGAAAAT+GGG - chr4_2:71316015-71316034 None:intergenic 30.0%
!!! GTTTTATGTTTTGGTGGAAT+TGG - chr4_2:71316023-71316042 None:intergenic 30.0%
!! GAAAACGTTTTATGTTTTGG+TGG - chr4_2:71316029-71316048 None:intergenic 30.0%
TTATGGTTCTCATTACCAAA+GGG - chr4_2:71316092-71316111 None:intergenic 30.0%
ATTATGGTTCTCATTACCAA+AGG - chr4_2:71316093-71316112 None:intergenic 30.0%
ACTCCTATACAAACAACTAA+GGG - chr4_2:71316129-71316148 None:intergenic 30.0%
AACTCCTATACAAACAACTA+AGG - chr4_2:71316130-71316149 None:intergenic 30.0%
GCCTATTCCAATAATAAAGA+GGG - chr4_2:71316197-71316216 None:intergenic 30.0%
AGCCTATTCCAATAATAAAG+AGG - chr4_2:71316198-71316217 None:intergenic 30.0%
AAATTGTTTATTGGTGCATG+TGG + chr4_2:71316243-71316262 Msa0620000:intron 30.0%
!! TTTTTGAATTGTTGCTGCTT+TGG + chr4_2:71316306-71316325 Msa0620000:intron 30.0%
!! GGAGTAAACATTTAAGTTGA+AGG + chr4_2:71316365-71316384 Msa0620000:intron 30.0%
!! CATTTAAGTTGAAGGCTATA+TGG + chr4_2:71316373-71316392 Msa0620000:intron 30.0%
! ACTGATACTATTTCTCTTGA+AGG + chr4_2:71316413-71316432 Msa0620000:intron 30.0%
! CTGATACTATTTCTCTTGAA+GGG + chr4_2:71316414-71316433 Msa0620000:intron 30.0%
! TGATACTATTTCTCTTGAAG+GGG + chr4_2:71316415-71316434 Msa0620000:intron 30.0%
ATACAAAGGATAGACTTGAA+TGG - chr4_2:71316593-71316612 None:intergenic 30.0%
ATTCAAGTCTATCCTTTGTA+TGG + chr4_2:71316592-71316611 Msa0620000:intron 30.0%
AAATATAATACTGATAGGGC+TGG - chr4_2:71316861-71316880 None:intergenic 30.0%
!!! AGAATTTTGTCGATTCAACT+AGG + chr4_2:71317074-71317093 Msa0620000:intron 30.0%
! AATGTAAAACTGGATTTTGC+TGG - chr4_2:71317941-71317960 None:intergenic 30.0%
TCAAATTTGGTCAAAGAAGA+AGG - chr4_2:71318119-71318138 None:intergenic 30.0%
TTCTTGGGGAACTAAAAAAA+TGG + chr4_2:71318198-71318217 Msa0620000:exon 30.0%
TCTTGGGGAACTAAAAAAAT+GGG + chr4_2:71318199-71318218 Msa0620000:exon 30.0%
!!! TTTGGAAATTGGGTTTTTTG+GGG + chr4_2:71318224-71318243 Msa0620000:CDS 30.0%
TAAAGAGAAAAGCAACACAA+AGG - chr4_2:71318252-71318271 None:intergenic 30.0%
! AGTTACAGTATTGAACTAGA+AGG - chr4_2:71318628-71318647 None:intergenic 30.0%
!! ACAAACCTTTAAGACTTTCA+AGG + chr4_2:71318971-71318990 Msa0620000:intron 30.0%
TTTCACCTTGAAAGTCTTAA+AGG - chr4_2:71318979-71318998 None:intergenic 30.0%
TTTGCTTGCATTGTCTTTAA+AGG - chr4_2:71319213-71319232 None:intergenic 30.0%
AACAAGAAAGATAGCTATGA+GGG + chr4_2:71320060-71320079 Msa0620000:intron 30.0%
! TATTTTGCTACCTATACTAC+AGG - chr4_2:71320109-71320128 None:intergenic 30.0%
! TTGCAAAGTATCAAACAGAA+GGG + chr4_2:71320333-71320352 Msa0620000:intron 30.0%
! ACAAGTACTTTTCTAACTCT+CGG + chr4_2:71320391-71320410 Msa0620000:intron 30.0%
ACTGGAAGAATTGTTAATTC+TGG - chr4_2:71320513-71320532 None:intergenic 30.0%
GGATATATATATGTTCAGCT+TGG - chr4_2:71320611-71320630 None:intergenic 30.0%
AACAATTAATGGCGTAAAGT+TGG - chr4_2:71320713-71320732 None:intergenic 30.0%
ATCCTGTAATTGCAGAAAAT+TGG - chr4_2:71320801-71320820 None:intergenic 30.0%
AATAATATATCCTTCCGCAA+GGG - chr4_2:71320854-71320873 None:intergenic 30.0%
TAATAATATATCCTTCCGCA+AGG - chr4_2:71320855-71320874 None:intergenic 30.0%
TATGTACCAAACATATCCTT+AGG - chr4_2:71320935-71320954 None:intergenic 30.0%
ATAATAAATGTGCACATCCT+TGG + chr4_2:71320954-71320973 Msa0620000:intron 30.0%
!!! TGGAATTTTGAGGTGTTTAT+AGG + chr4_2:71320982-71321001 Msa0620000:intron 30.0%
GCATTAAGAAATTCTGTTTC+TGG + chr4_2:71321034-71321053 Msa0620000:intron 30.0%
TTTGTGGTTGAACTAATTGT+AGG + chr4_2:71321150-71321169 Msa0620000:intron 30.0%
!! TTTCTTCAAATTGGCCTTAT+TGG + chr4_2:71313211-71313230 Msa0620000:intron 30.0%
ACATATTCTAGACTCATACT+TGG - chr4_2:71321560-71321579 None:intergenic 30.0%
!! TATTTTGTTTCAGGAAGAGA+AGG + chr4_2:71313417-71313436 Msa0620000:intron 30.0%
AAGTACACAAAAATTGACCT+GGG - chr4_2:71321853-71321872 None:intergenic 30.0%
! AAATACCCTCATTTGAAGTT+TGG - chr4_2:71321948-71321967 None:intergenic 30.0%
TATTGTATGCATAAGAATGC+TGG + chr4_2:71321997-71322016 Msa0620000:intron 30.0%
GATGAACAAATAATCCTAAC+TGG + chr4_2:71322256-71322275 Msa0620000:intron 30.0%
ATATCATCGGCAATAATAAC+AGG - chr4_2:71322488-71322507 None:intergenic 30.0%
AAACGGTAGAACAATATCAT+CGG - chr4_2:71322501-71322520 None:intergenic 30.0%
TGTTTCCTTAGTATAACTTC+TGG - chr4_2:71322611-71322630 None:intergenic 30.0%
AGATCAATCATGTAGCAAAT+TGG - chr4_2:71322979-71322998 None:intergenic 30.0%
TTTCTTGTTCTGATGATAGT+TGG + chr4_2:71323104-71323123 Msa0620000:three_prime_UTR 30.0%
!!! CATATCATAGCTTGTTGTTT+TGG + chr4_2:71323192-71323211 Msa0620000:three_prime_UTR 30.0%
!!! TTGTTTTGGTAAACTTAGAG+TGG + chr4_2:71323206-71323225 Msa0620000:three_prime_UTR 30.0%
GCTAAAATCTAAATACTGGA+AGG - chr4_2:71323335-71323354 None:intergenic 30.0%
!! TCCAGTATTTAGATTTTAGC+AGG + chr4_2:71323335-71323354 Msa0620000:three_prime_UTR 30.0%
TCCTGCTAAAATCTAAATAC+TGG - chr4_2:71323339-71323358 None:intergenic 30.0%
!!! TCAGTGTTTTTTCTTTGACA+AGG + chr4_2:71323385-71323404 Msa0620000:three_prime_UTR 30.0%
TCTCATGAAAGATATTAGTC+TGG + chr4_2:71323466-71323485 Msa0620000:three_prime_UTR 30.0%
!! GTAATTCTAGTTTATTCTCC+AGG + chr4_2:71323495-71323514 Msa0620000:three_prime_UTR 30.0%
!!! TGAATTTTGCTGGTTTAGAG+GGG - chr4_2:71310940-71310959 None:intergenic 35.0%
!!! GTGAATTTTGCTGGTTTAGA+GGG - chr4_2:71310941-71310960 None:intergenic 35.0%
AAGAAGATGAAGATTGACGA+AGG - chr4_2:71310963-71310982 None:intergenic 35.0%
AAGTTGAAAATGGAAGAGTG+TGG - chr4_2:71310992-71311011 None:intergenic 35.0%
TTTCAATGGAATTAGCTGGA+AGG - chr4_2:71311093-71311112 None:intergenic 35.0%
TCTTAGAAATGGGGTTTCAA+TGG - chr4_2:71311107-71311126 None:intergenic 35.0%
TGGGAGATTTCTTAGAAATG+GGG - chr4_2:71311116-71311135 None:intergenic 35.0%
GTGGGAGATTTCTTAGAAAT+GGG - chr4_2:71311117-71311136 None:intergenic 35.0%
TGTGGGAGATTTCTTAGAAA+TGG - chr4_2:71311118-71311137 None:intergenic 35.0%
TAGTCAACAGAAGAAGGTTA+AGG - chr4_2:71311165-71311184 None:intergenic 35.0%
TCACCTGAAATTCTTTCAGT+AGG - chr4_2:71311345-71311364 None:intergenic 35.0%
! TGTGATCAATTTTTGTCACG+TGG + chr4_2:71311434-71311453 Msa0620000:intron 35.0%
! GTGATCAATTTTTGTCACGT+GGG + chr4_2:71311435-71311454 Msa0620000:intron 35.0%
ATTATGAATGTGATCTGCTC+TGG + chr4_2:71311508-71311527 Msa0620000:intron 35.0%
TCAAACTAGCAGGATTGAAT+TGG - chr4_2:71311588-71311607 None:intergenic 35.0%
CATACTAGTATCAAACTAGC+AGG - chr4_2:71311598-71311617 None:intergenic 35.0%
GTGTTCCTTAGATTCAATGT+CGG + chr4_2:71311649-71311668 Msa0620000:intron 35.0%
AATTGCCGACATTGAATCTA+AGG - chr4_2:71311657-71311676 None:intergenic 35.0%
ATTCAATGTCGGCAATTATG+AGG + chr4_2:71311660-71311679 Msa0620000:intron 35.0%
! AGCATAATGCAGAGTATCAA+GGG - chr4_2:71311715-71311734 None:intergenic 35.0%
TGAGATGTGAAGTCATAAAG+AGG - chr4_2:71311833-71311852 None:intergenic 35.0%
CTGGAAGGACCTAAATAAAA+TGG - chr4_2:71311947-71311966 None:intergenic 35.0%
CACCATTCCTTGAAAAATAC+AGG - chr4_2:71312263-71312282 None:intergenic 35.0%
! TGGCAACTAGTTTAAGAGTT+TGG + chr4_2:71312344-71312363 Msa0620000:intron 35.0%
! TGGAAGGTGTATAACTTCAT+AGG + chr4_2:71312364-71312383 Msa0620000:intron 35.0%
AAGGTGTATAACTTCATAGG+CGG + chr4_2:71312367-71312386 Msa0620000:intron 35.0%
TTAATTCTTGGGTAAAGTGG+GGG - chr4_2:71312644-71312663 None:intergenic 35.0%
TACAAACGACTTAAAACTCC+AGG - chr4_2:71312716-71312735 None:intergenic 35.0%
ATTGTGGTTGAACCAATTGT+AGG + chr4_2:71312892-71312911 Msa0620000:intron 35.0%
ATCAGCTTCTTCAGGATTAA+GGG - chr4_2:71313091-71313110 None:intergenic 35.0%
AATCAGCTTCTTCAGGATTA+AGG - chr4_2:71313092-71313111 None:intergenic 35.0%
TTAATCCTGAAGAAGCTGAT+TGG + chr4_2:71313091-71313110 Msa0620000:intron 35.0%
TAAAACCAATCAGCTTCTTC+AGG - chr4_2:71313099-71313118 None:intergenic 35.0%
AGGAACCACAAAGAAATGAT+CGG - chr4_2:71313253-71313272 None:intergenic 35.0%
GGCATTAATAGTTGAATCAG+AGG - chr4_2:71313373-71313392 None:intergenic 35.0%
AAGAGAAGGCAATTGAAAGA+GGG + chr4_2:71313431-71313450 Msa0620000:intron 35.0%
AAATCATGTGTGCTTGAAAG+AGG + chr4_2:71313504-71313523 Msa0620000:intron 35.0%
AATCATGTGTGCTTGAAAGA+GGG + chr4_2:71313505-71313524 Msa0620000:intron 35.0%
! GGATTTTATCAGGAATTAGG+TGG - chr4_2:71313576-71313595 None:intergenic 35.0%
! TGGGGATTTTATCAGGAATT+AGG - chr4_2:71313579-71313598 None:intergenic 35.0%
TAATTCCTGATAAAATCCCC+AGG + chr4_2:71313578-71313597 Msa0620000:intron 35.0%
ACAAGCTCAAACTTCAAATG+AGG + chr4_2:71313684-71313703 Msa0620000:intron 35.0%
TTATGTGTGCATAAGAAAGC+CGG + chr4_2:71313739-71313758 Msa0620000:intron 35.0%
TCTGATGCATGCATGAATTT+CGG + chr4_2:71313916-71313935 Msa0620000:intron 35.0%
CAATACCATGGGAAGATATT+GGG + chr4_2:71314230-71314249 Msa0620000:intron 35.0%
AATACCATGGGAAGATATTG+GGG + chr4_2:71314231-71314250 Msa0620000:intron 35.0%
TCCGACCAGAAGTTATATTA+AGG + chr4_2:71314305-71314324 Msa0620000:intron 35.0%
GAATAGCATTGCTTGTTTCA+TGG - chr4_2:71314356-71314375 None:intergenic 35.0%
!! GCTTTCCATCAAGTTCTAAA+TGG + chr4_2:71314400-71314419 Msa0620000:intron 35.0%
! CAAGTCCATTTAGAACTTGA+TGG - chr4_2:71314408-71314427 None:intergenic 35.0%
!! AAGTTCTAAATGGACTTGCA+CGG + chr4_2:71314410-71314429 Msa0620000:intron 35.0%
ACAACTGTTACCAAGGTTTA+AGG - chr4_2:71314513-71314532 None:intergenic 35.0%
AACTACTACAACTGTTACCA+AGG - chr4_2:71314520-71314539 None:intergenic 35.0%
TTTGTGCTGCATACTAGATT+AGG + chr4_2:71314771-71314790 Msa0620000:intron 35.0%
AGATTAGGTAATTTGGGTCA+CGG + chr4_2:71314786-71314805 Msa0620000:intron 35.0%
ATTTCAAGATTAGAATGGGC+AGG + chr4_2:71314847-71314866 Msa0620000:intron 35.0%
GTGAACTATGAAGTTCTCTT+TGG + chr4_2:71314869-71314888 Msa0620000:intron 35.0%
AGAATTGATTGGATTCCAAG+TGG + chr4_2:71315066-71315085 Msa0620000:intron 35.0%
! GCATTTAGTTCAAGAACCAA+TGG - chr4_2:71315095-71315114 None:intergenic 35.0%
CGATTTACATTCAAGAACGT+GGG - chr4_2:71315171-71315190 None:intergenic 35.0%
TCGATTTACATTCAAGAACG+TGG - chr4_2:71315172-71315191 None:intergenic 35.0%
TCTTACAACTAAACCAACCT+TGG + chr4_2:71315194-71315213 Msa0620000:intron 35.0%
TTCTGTGATACCGATAGATT+TGG + chr4_2:71315255-71315274 Msa0620000:intron 35.0%
CTTTCTCTCTTGTATGATCA+TGG - chr4_2:71315330-71315349 None:intergenic 35.0%
! TAATTGTCAGTATTTAGGGC+TGG + chr4_2:71315589-71315608 Msa0620000:intron 35.0%
ATTTCGAACTACATTCGAGT+TGG - chr4_2:71315627-71315646 None:intergenic 35.0%
! CTTAATTTTCAGCTCAGGTT+CGG - chr4_2:71315697-71315716 None:intergenic 35.0%
! ACGAACTTAATTTTCAGCTC+AGG - chr4_2:71315702-71315721 None:intergenic 35.0%
TGGGTAAAAAAAGGGAGAAA+CGG - chr4_2:71315917-71315936 None:intergenic 35.0%
TTCCTAGATAGACAATGGAA+CGG - chr4_2:71315941-71315960 None:intergenic 35.0%
CCTATTTCCTAGATAGACAA+TGG - chr4_2:71315946-71315965 None:intergenic 35.0%
CCATTGTCTATCTAGGAAAT+AGG + chr4_2:71315943-71315962 Msa0620000:intron 35.0%
!! GTTTTGGTGGAATTGGAAAA+TGG - chr4_2:71316016-71316035 None:intergenic 35.0%
TTCGCATATGAATTTGCCTA+TGG - chr4_2:71316068-71316087 None:intergenic 35.0%
GGGACCATATCATCTTATTA+TGG - chr4_2:71316109-71316128 None:intergenic 35.0%
AGTTGAAGATGCACAATTGA+TGG - chr4_2:71316154-71316173 None:intergenic 35.0%
CAGTTTGCCCTCTTTATTAT+TGG + chr4_2:71316187-71316206 Msa0620000:intron 35.0%
GCCCTCTTTATTATTGGAAT+AGG + chr4_2:71316193-71316212 Msa0620000:intron 35.0%
AACAAGCTTCACAAATGATG+TGG - chr4_2:71316335-71316354 None:intergenic 35.0%
TGAAGGCTATATGGAAAATG+TGG + chr4_2:71316382-71316401 Msa0620000:intron 35.0%
AAGAGTGAAGAAGAAGATGA+AGG - chr4_2:71317971-71317990 None:intergenic 35.0%
GTGACAGATTTCTTAGGAAT+GGG - chr4_2:71318070-71318089 None:intergenic 35.0%
TGTGACAGATTTCTTAGGAA+TGG - chr4_2:71318071-71318090 None:intergenic 35.0%
GTAGTTGTGACAGATTTCTT+AGG - chr4_2:71318076-71318095 None:intergenic 35.0%
GCTGCAAAAGAAGTAGTAAA+GGG - chr4_2:71318157-71318176 None:intergenic 35.0%
TGCTGCAAAAGAAGTAGTAA+AGG - chr4_2:71318158-71318177 None:intergenic 35.0%
CAACCTACTGAAAGAATTTC+AGG + chr4_2:71318301-71318320 Msa0620000:CDS 35.0%
CTACCTGAAATTCTTTCAGT+AGG - chr4_2:71318307-71318326 None:intergenic 35.0%
! TTTATGGTTAGGTGTCATGT+AGG + chr4_2:71318388-71318407 Msa0620000:intron 35.0%
!! TTAGGATCTGCTTTTGATTG+AGG + chr4_2:71318485-71318504 Msa0620000:intron 35.0%
ACGACAACATTAAAAGATGC+CGG - chr4_2:71318857-71318876 None:intergenic 35.0%
!! GAATTACGAAAAGTGTTAGC+AGG + chr4_2:71319084-71319103 Msa0620000:intron 35.0%
CTTAAATGAGTTGCTGACAT+TGG - chr4_2:71319156-71319175 None:intergenic 35.0%
TGAACCTTGCGGTTATAAAT+AGG + chr4_2:71319235-71319254 Msa0620000:intron 35.0%
GAACCTTGCGGTTATAAATA+GGG + chr4_2:71319236-71319255 Msa0620000:intron 35.0%
GCATTTGCTCTGATTTACAA+GGG - chr4_2:71319407-71319426 None:intergenic 35.0%
AGCATTTGCTCTGATTTACA+AGG - chr4_2:71319408-71319427 None:intergenic 35.0%
ACATCAATATAGGGTGGAAA+AGG - chr4_2:71319504-71319523 None:intergenic 35.0%
GATAGAACATCAATATAGGG+TGG - chr4_2:71319510-71319529 None:intergenic 35.0%
TAGACCTAAGCTCTACAAAT+GGG - chr4_2:71319549-71319568 None:intergenic 35.0%
CTGGATCAAAGTTTACATTC+AGG - chr4_2:71319759-71319778 None:intergenic 35.0%
AATGTAAACTTTGATCCAGC+TGG + chr4_2:71319760-71319779 Msa0620000:intron 35.0%
! TTGGTCTTTGGTATGCTTTA+TGG - chr4_2:71319877-71319896 None:intergenic 35.0%
ATACCAAAGACCAAGTACAT+AGG + chr4_2:71319883-71319902 Msa0620000:intron 35.0%
TACCAAAGACCAAGTACATA+GGG + chr4_2:71319884-71319903 Msa0620000:intron 35.0%
CATTATACTCCCTATGTACT+TGG - chr4_2:71319896-71319915 None:intergenic 35.0%
TCTAGGAAAGGACAAATCTT+TGG - chr4_2:71319947-71319966 None:intergenic 35.0%
TGCTCCCATTAATTCAGAAA+TGG - chr4_2:71320020-71320039 None:intergenic 35.0%
CAACAAGAAAGATAGCTATG+AGG + chr4_2:71320059-71320078 Msa0620000:intron 35.0%
CAACACAAAACCTGTAGTAT+AGG + chr4_2:71320096-71320115 Msa0620000:intron 35.0%
TCCCCACAATTACTGAAATT+TGG + chr4_2:71320139-71320158 Msa0620000:intron 35.0%
CCCAAATTTCAGTAATTGTG+GGG - chr4_2:71320143-71320162 None:intergenic 35.0%
CCCCACAATTACTGAAATTT+GGG + chr4_2:71320140-71320159 Msa0620000:intron 35.0%
GCCCAAATTTCAGTAATTGT+GGG - chr4_2:71320144-71320163 None:intergenic 35.0%
AGCCCAAATTTCAGTAATTG+TGG - chr4_2:71320145-71320164 None:intergenic 35.0%
TGAGCGTTAGGATTATTGTA+AGG - chr4_2:71320206-71320225 None:intergenic 35.0%
ATGGCATGCTTTAATCAAAG+CGG - chr4_2:71320235-71320254 None:intergenic 35.0%
AGCAGTGCTAAAAAATGAGA+TGG - chr4_2:71320254-71320273 None:intergenic 35.0%
CGAATCTAACAAAATGTGTG+AGG - chr4_2:71320291-71320310 None:intergenic 35.0%
! GTTGCAAAGTATCAAACAGA+AGG + chr4_2:71320332-71320351 Msa0620000:intron 35.0%
! TGCAAAGTATCAAACAGAAG+GGG + chr4_2:71320334-71320353 Msa0620000:intron 35.0%
!! TGTTTTGTTACAACAGGGAT+TGG + chr4_2:71320541-71320560 Msa0620000:intron 35.0%
ACAAAGGCAAGGAAGTTATT+AGG - chr4_2:71320580-71320599 None:intergenic 35.0%
!! CTCTGAAATGGTTAACAGAA+TGG + chr4_2:71320751-71320770 Msa0620000:intron 35.0%
CTGTAATTGCAGAAAATTGG+AGG - chr4_2:71320798-71320817 None:intergenic 35.0%
! CTCCAATTTTCTGCAATTAC+AGG + chr4_2:71320796-71320815 Msa0620000:intron 35.0%
ATAATATATCCTTCCGCAAG+GGG - chr4_2:71320853-71320872 None:intergenic 35.0%
!!! GCTCGGTAGTTTTAATAGAT+TGG + chr4_2:71320893-71320912 Msa0620000:intron 35.0%
GGAATTCCTAAGGATATGTT+TGG + chr4_2:71320926-71320945 Msa0620000:intron 35.0%
TGATGTATTGGAAGATGATC+CGG + chr4_2:71321182-71321201 Msa0620000:CDS 35.0%
ATCAGCTTCTTCAGGATTAA+GGG - chr4_2:71313091-71313110 None:intergenic 35.0%
AATCAGCTTCTTCAGGATTA+AGG - chr4_2:71313092-71313111 None:intergenic 35.0%
TTAATCCTGAAGAAGCTGAT+TGG + chr4_2:71313091-71313110 Msa0620000:intron 35.0%
TAAAACCAATCAGCTTCTTC+AGG - chr4_2:71313099-71313118 None:intergenic 35.0%
AGGAACCACAAAGAAATGAT+CGG - chr4_2:71313253-71313272 None:intergenic 35.0%
TCTAGACTCATACTTGGTAA+TGG - chr4_2:71321554-71321573 None:intergenic 35.0%
ATATGGTTTATGTGCAGCAT+TGG - chr4_2:71321631-71321650 None:intergenic 35.0%
AAGAGAAGGCAATTGAAAGA+GGG + chr4_2:71313431-71313450 Msa0620000:intron 35.0%
CTACCTTGGTTCAAACATTT+GGG + chr4_2:71313476-71313495 Msa0620000:intron 35.0%
AATCATGTGTGCTTGAAAGA+TGG + chr4_2:71313505-71313524 Msa0620000:intron 35.0%
AGTACACAAAAATTGACCTG+GGG - chr4_2:71321852-71321871 None:intergenic 35.0%
GAAGTACACAAAAATTGACC+TGG - chr4_2:71321854-71321873 None:intergenic 35.0%
! TCAATTTTTGTGTACTTCCG+AGG + chr4_2:71321856-71321875 Msa0620000:CDS 35.0%
CAACATCATAAAACAGTCCT+CGG - chr4_2:71321876-71321895 None:intergenic 35.0%
TTGCATAATAACCACCTTCA+GGG - chr4_2:71321906-71321925 None:intergenic 35.0%
! TGCAAGGTAGGTCTTTTTAT+CGG + chr4_2:71321921-71321940 Msa0620000:intron 35.0%
! GTGATTTGGAACTTTAACAG+AGG + chr4_2:71322290-71322309 Msa0620000:intron 35.0%
TCCACTATTTGACATTTCGA+CGG + chr4_2:71322349-71322368 Msa0620000:CDS 35.0%
ATGTCCTCGTAATATGTTGT+TGG - chr4_2:71322380-71322399 None:intergenic 35.0%
TCCTTAGTATAACTTCTGGT+GGG - chr4_2:71322607-71322626 None:intergenic 35.0%
TTCCTTAGTATAACTTCTGG+TGG - chr4_2:71322608-71322627 None:intergenic 35.0%
ACATTGCTTGCTTCATAGAA+GGG - chr4_2:71322649-71322668 None:intergenic 35.0%
AACATTGCTTGCTTCATAGA+AGG - chr4_2:71322650-71322669 None:intergenic 35.0%
! TCCATTTAGAACTTGATGGA+AGG - chr4_2:71314404-71314423 None:intergenic 35.0%
! CAAGTCCATTTAGAACTTGA+TGG - chr4_2:71314408-71314427 None:intergenic 35.0%
!! AAGTTCTAAATGGACTTGCA+CGG + chr4_2:71314410-71314429 Msa0620000:intron 35.0%
! AGGAGTGTATTCTTGAAACA+AGG + chr4_2:71322746-71322765 Msa0620000:CDS 35.0%
GGAGTGTATTCTTGAAACAA+GGG + chr4_2:71322747-71322766 Msa0620000:CDS 35.0%
GAGTGTATTCTTGAAACAAG+GGG + chr4_2:71322748-71322767 Msa0620000:CDS 35.0%
AAAACTGCTACCAAGGTTTA+AGG - chr4_2:71322811-71322830 None:intergenic 35.0%
TAAAGAATCATAATCGCCTC+AGG - chr4_2:71322840-71322859 None:intergenic 35.0%
!!! ACTTATTTTGCTGCCTTAGT+AGG + chr4_2:71323016-71323035 Msa0620000:three_prime_UTR 35.0%
GATATGCTTGAAGTCTCAAT+TGG - chr4_2:71323178-71323197 None:intergenic 35.0%
! ATATTTTGTGTCTGTGTGTG+TGG + chr4_2:71323252-71323271 Msa0620000:three_prime_UTR 35.0%
!! TTAGGAAGAAGTGTCAAATC+TGG + chr4_2:71323287-71323306 Msa0620000:three_prime_UTR 35.0%
TTGGATTCAAGCTTGTCTTT+AGG + chr4_2:71323360-71323379 Msa0620000:three_prime_UTR 35.0%
!! TTCTAGTTTATTCTCCAGGT+AGG + chr4_2:71323499-71323518 Msa0620000:three_prime_UTR 35.0%
! TCTAGTTTATTCTCCAGGTA+GGG + chr4_2:71323500-71323519 Msa0620000:three_prime_UTR 35.0%
!! AGGGGTATTGTAATTGTGTG+GGG - chr4_2:71310922-71310941 None:intergenic 40.0%
!! GAGGGGTATTGTAATTGTGT+GGG - chr4_2:71310923-71310942 None:intergenic 40.0%
!! AGAGGGGTATTGTAATTGTG+TGG - chr4_2:71310924-71310943 None:intergenic 40.0%
!!! GGTGAATTTTGCTGGTTTAG+AGG - chr4_2:71310942-71310961 None:intergenic 40.0%
! TTGACGAAGGTGAATTTTGC+TGG - chr4_2:71310950-71310969 None:intergenic 40.0%
GAGAGTAGCGAAGTTGAAAA+TGG - chr4_2:71311002-71311021 None:intergenic 40.0%
TGGAATTAGCTGGAAGGAAA+GGG - chr4_2:71311087-71311106 None:intergenic 40.0%
ATGGAATTAGCTGGAAGGAA+AGG - chr4_2:71311088-71311107 None:intergenic 40.0%
AGGGAAAGTAGTTGTGTTGT+GGG - chr4_2:71311135-71311154 None:intergenic 40.0%
AAGGGAAAGTAGTTGTGTTG+TGG - chr4_2:71311136-71311155 None:intergenic 40.0%
!! AGAAGGTTAAGGTGTCGTAA+GGG - chr4_2:71311154-71311173 None:intergenic 40.0%
!! AAGAAGGTTAAGGTGTCGTA+AGG - chr4_2:71311155-71311174 None:intergenic 40.0%
TCTCTCTTCAATTGATGCTG+TGG + chr4_2:71311302-71311321 Msa0620000:intron 40.0%
CAGCCTACTGAAAGAATTTC+AGG + chr4_2:71311339-71311358 Msa0620000:intron 40.0%
AGTATCAAGGGAAACACATG+AGG - chr4_2:71311703-71311722 None:intergenic 40.0%
! GAGCATAATGCAGAGTATCA+AGG - chr4_2:71311716-71311735 None:intergenic 40.0%
GATGCATATTGACAGCCTAA+CGG - chr4_2:71311738-71311757 None:intergenic 40.0%
AAAAAATCCCAACACGCTGT+CGG + chr4_2:71311793-71311812 Msa0620000:intron 40.0%
CGTGTCTGTACTTCAAATGT+TGG + chr4_2:71312317-71312336 Msa0620000:intron 40.0%
GTACTTCAAATGTTGGCAAG+TGG + chr4_2:71312324-71312343 Msa0620000:intron 40.0%
TCCAAGCAAATTGGGATCTT+AGG + chr4_2:71312407-71312426 Msa0620000:intron 40.0%
! TCCTAAGATCCCAATTTGCT+TGG - chr4_2:71312411-71312430 None:intergenic 40.0%
! TTACGTAAGAGGTACACCAT+TGG - chr4_2:71312495-71312514 None:intergenic 40.0%
! ATACAACAAAAGCACATCCC+CGG + chr4_2:71312687-71312706 Msa0620000:intron 40.0%
CGATGTATTGGAAGATGATC+CGG + chr4_2:71312924-71312943 Msa0620000:intron 40.0%
AAAACCTTCAACCTTCCAAC+CGG - chr4_2:71312946-71312965 None:intergenic 40.0%
GATCTCAGCAGCAAACATAT+GGG - chr4_2:71313031-71313050 None:intergenic 40.0%
AGATCTCAGCAGCAAACATA+TGG - chr4_2:71313032-71313051 None:intergenic 40.0%
CTGCTGAGATCTTTATGCAT+CGG + chr4_2:71313040-71313059 Msa0620000:intron 40.0%
CTTCTTCAGGATTAAGGGTT+CGG - chr4_2:71313086-71313105 None:intergenic 40.0%
ATCATTCGAGGCGACTTAAA+GGG - chr4_2:71313171-71313190 None:intergenic 40.0%
TTTGTGGTTCCTCATGACTT+TGG + chr4_2:71313261-71313280 Msa0620000:intron 40.0%
TTGTGGTTCCTCATGACTTT+GGG + chr4_2:71313262-71313281 Msa0620000:intron 40.0%
CTAGATCTCGTACTTGGTAA+TGG - chr4_2:71313296-71313315 None:intergenic 40.0%
TCAACTATTAATGCCTCACG+TGG + chr4_2:71313378-71313397 Msa0620000:intron 40.0%
CAACTATTAATGCCTCACGT+GGG + chr4_2:71313379-71313398 Msa0620000:intron 40.0%
GAAGAGAAGGCAATTGAAAG+AGG + chr4_2:71313430-71313449 Msa0620000:intron 40.0%
GCTACCTTGGTTCAAACATT+TGG + chr4_2:71313475-71313494 Msa0620000:intron 40.0%
CTGACCAAATGTTTGAACCA+AGG - chr4_2:71313482-71313501 None:intergenic 40.0%
!! ATTTTCTGTGGTGGAGCATA+TGG - chr4_2:71313547-71313566 None:intergenic 40.0%
! ATAGACCTGGGGATTTTATC+AGG - chr4_2:71313586-71313605 None:intergenic 40.0%
TTGCATAGTATCCACCTTCA+GGG - chr4_2:71313651-71313670 None:intergenic 40.0%
ACTTCAAATGAGGCTTGAGT+AGG + chr4_2:71313694-71313713 Msa0620000:intron 40.0%
! CTCATCCTTCTACTCTGAAA+AGG + chr4_2:71313762-71313781 Msa0620000:intron 40.0%
AGCAGTATGGGAGAACTTTA+AGG + chr4_2:71314024-71314043 Msa0620000:intron 40.0%
GCACCCAACAACATATTATG+AGG + chr4_2:71314075-71314094 Msa0620000:intron 40.0%
TTGGTTGAAGCTGTGGTATT+TGG + chr4_2:71314157-71314176 Msa0620000:intron 40.0%
GCAATACCATGGGAAGATAT+TGG + chr4_2:71314229-71314248 Msa0620000:intron 40.0%
GTGAGTATGGTATCCAACTT+GGG - chr4_2:71314280-71314299 None:intergenic 40.0%
TGTGAGTATGGTATCCAACT+TGG - chr4_2:71314281-71314300 None:intergenic 40.0%
GCATTGCTTGTTTCATGGAA+GGG - chr4_2:71314351-71314370 None:intergenic 40.0%
AGCATTGCTTGTTTCATGGA+AGG - chr4_2:71314352-71314371 None:intergenic 40.0%
AAGAATACACTCCTGTCATG+CGG - chr4_2:71314442-71314461 None:intergenic 40.0%
! AGGAGTGTATTCTTGAAACC+AGG + chr4_2:71314448-71314467 Msa0620000:intron 40.0%
GGAGTGTATTCTTGAAACCA+GGG + chr4_2:71314449-71314468 Msa0620000:intron 40.0%
GAGTGTATTCTTGAAACCAG+GGG + chr4_2:71314450-71314469 Msa0620000:intron 40.0%
AAAAGCTTGAATTGGACTGC+TGG + chr4_2:71314475-71314494 Msa0620000:intron 40.0%
TGCAGCACAAAAAAGAGAAC+AGG - chr4_2:71314762-71314781 None:intergenic 40.0%
TACCAGTGACCTTTGTAACT+TGG + chr4_2:71314892-71314911 Msa0620000:intron 40.0%
AACCAAGTTACAAAGGTCAC+TGG - chr4_2:71314897-71314916 None:intergenic 40.0%
CACATGGAACCAAGTTACAA+AGG - chr4_2:71314904-71314923 None:intergenic 40.0%
GAAGCACAGATGATAAGATC+TGG - chr4_2:71315036-71315055 None:intergenic 40.0%
AAGAACCAATGGTAACCACT+TGG - chr4_2:71315084-71315103 None:intergenic 40.0%
!! GAACTACATTCGAGTTGGTT+CGG - chr4_2:71315622-71315641 None:intergenic 40.0%
GACAATTGATCCGTTGAACT+TGG + chr4_2:71315654-71315673 Msa0620000:intron 40.0%
GGTTCATGAACCAAGTTCAA+CGG - chr4_2:71315667-71315686 None:intergenic 40.0%
GGAACGGATGGGTAAAAAAA+GGG - chr4_2:71315925-71315944 None:intergenic 40.0%
TGGAACGGATGGGTAAAAAA+AGG - chr4_2:71315926-71315945 None:intergenic 40.0%
AGATAGACAATGGAACGGAT+GGG - chr4_2:71315936-71315955 None:intergenic 40.0%
TAGATAGACAATGGAACGGA+TGG - chr4_2:71315937-71315956 None:intergenic 40.0%
ATCCGTTCCATTGTCTATCT+AGG + chr4_2:71315936-71315955 Msa0620000:intron 40.0%
AATTCATATGCGAAGCCCTT+TGG + chr4_2:71316074-71316093 Msa0620000:intron 40.0%
GGTCCCTTAGTTGTTTGTAT+AGG + chr4_2:71316123-71316142 Msa0620000:intron 40.0%
!! TGAAGCTTGTTGATGCCTAA+AGG + chr4_2:71316344-71316363 Msa0620000:intron 40.0%
! ATTTGGTTCAGCTCGAAACT+CGG - chr4_2:71316792-71316811 None:intergenic 40.0%
! CACAATAAAAGTGGAGGTGT+CGG + chr4_2:71317012-71317031 Msa0620000:intron 40.0%
! AGGTGGTGGTAATGTAAAAC+TGG - chr4_2:71317951-71317970 None:intergenic 40.0%
AGTGAAGAAGAAGATGAAGG+TGG - chr4_2:71317968-71317987 None:intergenic 40.0%
GGTCAAAGAAGAAGGTTAAG+AGG - chr4_2:71318111-71318130 None:intergenic 40.0%
! CAGTATTGAACTAGAAGGCA+TGG - chr4_2:71318623-71318642 None:intergenic 40.0%
TCCTTAGATTAGGTCCAATC+AGG + chr4_2:71318695-71318714 Msa0620000:intron 40.0%
CCTTAGATTAGGTCCAATCA+GGG + chr4_2:71318696-71318715 Msa0620000:intron 40.0%
ATGGAGCTGGACATATATGA+TGG + chr4_2:71318719-71318738 Msa0620000:intron 40.0%
TAAGTTTGGCATTGTTGCAG+TGG - chr4_2:71319118-71319137 None:intergenic 40.0%
GCAAGCAAAATTGAACCTTG+CGG + chr4_2:71319224-71319243 Msa0620000:intron 40.0%
TGCTCATTGGAAATCAAGCA+CGG - chr4_2:71319262-71319281 None:intergenic 40.0%
TATAGGGTGGAAAAGGAAAG+AGG - chr4_2:71319497-71319516 None:intergenic 40.0%
! CTCTACAAATGGGCTTAACT+GGG - chr4_2:71319539-71319558 None:intergenic 40.0%
TAAGCCCATTTGTAGAGCTT+AGG + chr4_2:71319542-71319561 Msa0620000:intron 40.0%
CTAGACCTAAGCTCTACAAA+TGG - chr4_2:71319550-71319569 None:intergenic 40.0%
AAGACAACGCTGTTCTTCAA+GGG - chr4_2:71319597-71319616 None:intergenic 40.0%
GGGAAGGATACATTTCTACT+CGG - chr4_2:71319646-71319665 None:intergenic 40.0%
TCGGGAAATAGTTCAACAAG+AGG - chr4_2:71319698-71319717 None:intergenic 40.0%
TGACTTCAGATAGCAACACT+CGG - chr4_2:71319717-71319736 None:intergenic 40.0%
! GTTGCTATCTGAAGTCATCA+AGG + chr4_2:71319720-71319739 Msa0620000:intron 40.0%
CTTTGATCCAGCTGGAATTA+TGG + chr4_2:71319768-71319787 Msa0620000:intron 40.0%
TCCAGCTGGAATTATGGAAT+CGG + chr4_2:71319774-71319793 Msa0620000:intron 40.0%
!! ACAAATTTTAAGGGTCCTCG+TGG - chr4_2:71319819-71319838 None:intergenic 40.0%
! GCTTTATGGCTTGTAAAGCA+TGG - chr4_2:71319863-71319882 None:intergenic 40.0%
!! ACTACAGGTTTTGTGTTGCA+GGG - chr4_2:71320094-71320113 None:intergenic 40.0%
!! TACTACAGGTTTTGTGTTGC+AGG - chr4_2:71320095-71320114 None:intergenic 40.0%
TACTGAAATTTGGGCTCCAA+TGG + chr4_2:71320149-71320168 Msa0620000:intron 40.0%
AACAATGTCAGATCTGCCAT+TGG - chr4_2:71320168-71320187 None:intergenic 40.0%
AATGGCAGATCTGACATTGT+TGG + chr4_2:71320167-71320186 Msa0620000:intron 40.0%
AAGCGGAAAATATGAGCGTT+AGG - chr4_2:71320218-71320237 None:intergenic 40.0%
ATGTGTGAGGAAGAATCTAC+TGG - chr4_2:71320278-71320297 None:intergenic 40.0%
TGATACTTTGCAACGCTACA+GGG - chr4_2:71320326-71320345 None:intergenic 40.0%
TTGATACTTTGCAACGCTAC+AGG - chr4_2:71320327-71320346 None:intergenic 40.0%
TGAACTTTAGTAGACACCGA+GGG + chr4_2:71320431-71320450 Msa0620000:intron 40.0%
TTTGTTCTTAGTGTTGCCCT+CGG - chr4_2:71320450-71320469 None:intergenic 40.0%
AGGGCAACACTAAGAACAAA+AGG + chr4_2:71320450-71320469 Msa0620000:intron 40.0%
GTTAATTCTGGTCCAACATC+AGG - chr4_2:71320501-71320520 None:intergenic 40.0%
TGGTCAGATAAACAAAGGCA+AGG - chr4_2:71320591-71320610 None:intergenic 40.0%
CAGCTTGGTCAGATAAACAA+AGG - chr4_2:71320596-71320615 None:intergenic 40.0%
TTCAGTGTCTTGCCATTATC+TGG + chr4_2:71320638-71320657 Msa0620000:intron 40.0%
TCAGTGTCTTGCCATTATCT+GGG + chr4_2:71320639-71320658 Msa0620000:intron 40.0%
! CAGGCTTTTCGATGTTTTGT+GGG - chr4_2:71320669-71320688 None:intergenic 40.0%
! TCAGGCTTTTCGATGTTTTG+TGG - chr4_2:71320670-71320689 None:intergenic 40.0%
! GCTTAACATGCTCTCTGAAA+TGG + chr4_2:71320739-71320758 Msa0620000:intron 40.0%
TAATATATCCTTCCGCAAGG+GGG - chr4_2:71320852-71320871 None:intergenic 40.0%
CTCAAAATTCCAAGTGACCA+AGG - chr4_2:71320974-71320993 None:intergenic 40.0%
! CTTGGTCACTTGGAATTTTG+AGG + chr4_2:71320972-71320991 Msa0620000:intron 40.0%
!! TCTGTTTCTGGAGATACAGT+AGG + chr4_2:71321046-71321065 Msa0620000:intron 40.0%
!! CTGTTTCTGGAGATACAGTA+GGG + chr4_2:71321047-71321066 Msa0620000:intron 40.0%
GAACTAATTGTAGGTAGTGC+TGG + chr4_2:71321159-71321178 Msa0620000:intron 40.0%
AAAACCTTCAACCTTCCAAC+CGG - chr4_2:71312946-71312965 None:intergenic 40.0%
!! ACATATGGGTTAGGCATCTT+GGG - chr4_2:71321275-71321294 None:intergenic 40.0%
!! AACATATGGGTTAGGCATCT+TGG - chr4_2:71321276-71321295 None:intergenic 40.0%
GATCTCAGCAGCAAACATAT+GGG - chr4_2:71313031-71313050 None:intergenic 40.0%
AGATCTCAGCAGCAAACATA+TGG - chr4_2:71313032-71313051 None:intergenic 40.0%
CTTCTTCAGGATTAAGGGTT+CGG - chr4_2:71313086-71313105 None:intergenic 40.0%
ATCATTCGAGGCGACTTAAA+GGG - chr4_2:71313171-71313190 None:intergenic 40.0%
TTTGTGGTTCCTCATGACTT+TGG + chr4_2:71313261-71313280 Msa0620000:intron 40.0%
TTGTGGTTCCTCATGACTTT+GGG + chr4_2:71313262-71313281 Msa0620000:intron 40.0%
GAAGAGAAGGCAATTGAAAG+AGG + chr4_2:71313430-71313449 Msa0620000:intron 40.0%
GCTACCTTGGTTCAAACATT+TGG + chr4_2:71313475-71313494 Msa0620000:intron 40.0%
!! ATTTTCTGTGGTGGAGCATA+TGG - chr4_2:71313547-71313566 None:intergenic 40.0%
! AAGTGGGTATGCATTTTCTG+TGG - chr4_2:71321814-71321833 None:intergenic 40.0%
! GGTCTTATCAGGAATCAAGT+GGG - chr4_2:71321830-71321849 None:intergenic 40.0%
GTACACAAAAATTGACCTGG+GGG - chr4_2:71321851-71321870 None:intergenic 40.0%
! CGAGGACTGTTTTATGATGT+TGG + chr4_2:71321874-71321893 Msa0620000:CDS 40.0%
CTTGCATAATAACCACCTTC+AGG - chr4_2:71321907-71321926 None:intergenic 40.0%
CTGAAGGTGGTTATTATGCA+AGG + chr4_2:71321905-71321924 Msa0620000:CDS 40.0%
AGGTGGTTATTATGCAAGGT+AGG + chr4_2:71321909-71321928 Msa0620000:intron 40.0%
ATCGGTCCAAACTTCAAATG+AGG + chr4_2:71321939-71321958 Msa0620000:intron 40.0%
TCGGTCCAAACTTCAAATGA+GGG + chr4_2:71321940-71321959 Msa0620000:intron 40.0%
! GCATGCATTCTTTTACCGAA+AGG + chr4_2:71322019-71322038 Msa0620000:intron 40.0%
! TCTTTTACCGAAAGGCGAAA+AGG + chr4_2:71322027-71322046 Msa0620000:intron 40.0%
CAAGTAATGCATACACGTCT+TGG + chr4_2:71322197-71322216 Msa0620000:intron 40.0%
TGGTCAATCTGTCTGTGATT+TGG + chr4_2:71322276-71322295 Msa0620000:intron 40.0%
TCCGTCGAAATGTCAAATAG+TGG - chr4_2:71322353-71322372 None:intergenic 40.0%
GCATCCAACAACATATTACG+AGG + chr4_2:71322373-71322392 Msa0620000:CDS 40.0%
AAGTGGGCATAGACAAAACA+CGG - chr4_2:71314113-71314132 None:intergenic 40.0%
TTGGTTGAAGCTGTGGTATT+TGG + chr4_2:71314157-71314176 Msa0620000:intron 40.0%
GTGAGTATGGTATCCAACTT+GGG - chr4_2:71314280-71314299 None:intergenic 40.0%
TGTGAGTATGGTATCCAACT+TGG - chr4_2:71314281-71314300 None:intergenic 40.0%
TCCCACCAGAAGTTATACTA+AGG + chr4_2:71322603-71322622 Msa0620000:CDS 40.0%
!! GCCTTCCATCAAGTTCTAAA+TGG + chr4_2:71322698-71322717 Msa0620000:CDS 40.0%
AAGAATACACTCCTGTCATG+TGG - chr4_2:71314442-71314461 None:intergenic 40.0%
GACTGTTAAAACTGCTACCA+AGG - chr4_2:71322818-71322837 None:intergenic 40.0%
!! TAGCAGTTTTAACAGTCCTG+AGG + chr4_2:71322821-71322840 Msa0620000:exon 40.0%
ATCCTCCCCAAAATGTTCAT+AGG + chr4_2:71322873-71322892 Msa0620000:three_prime_UTR 40.0%
TCCTCCCCAAAATGTTCATA+GGG + chr4_2:71322874-71322893 Msa0620000:three_prime_UTR 40.0%
GAAAACAGACACTCCTACTA+AGG - chr4_2:71323032-71323051 None:intergenic 40.0%
! GTCTGTTTTCTCTTGTGTCA+CGG + chr4_2:71323042-71323061 Msa0620000:three_prime_UTR 40.0%
! TGTGTGTGTGGATTTAGGTT+AGG + chr4_2:71323264-71323283 Msa0620000:three_prime_UTR 40.0%
! GTGTGGATTTAGGTTAGGTT+AGG + chr4_2:71323269-71323288 Msa0620000:three_prime_UTR 40.0%
!! TCTGGCTTGCTTAGAAGAAA+CGG + chr4_2:71323305-71323324 Msa0620000:three_prime_UTR 40.0%
AGAGACAGGTTAGAAGAGTG+AGG - chr4_2:71311040-71311059 None:intergenic 45.0%
! TTCTGAGAAGCAACAGAGAC+AGG - chr4_2:71311054-71311073 None:intergenic 45.0%
AGCTGGAAGGAAAGGGAAAT+GGG - chr4_2:71311080-71311099 None:intergenic 45.0%
TAGCTGGAAGGAAAGGGAAA+TGG - chr4_2:71311081-71311100 None:intergenic 45.0%
GGGGTTTCAATGGAATTAGC+TGG - chr4_2:71311097-71311116 None:intergenic 45.0%
! ATGTGATCTGCTCTGGATTG+AGG + chr4_2:71311515-71311534 Msa0620000:intron 45.0%
! GCTCTGGATTGAGGTTGATT+AGG + chr4_2:71311524-71311543 Msa0620000:intron 45.0%
ACTCTGCATTATGCTCCGTT+AGG + chr4_2:71311720-71311739 Msa0620000:intron 45.0%
TGTTGAAACTCTCACCCATC+CGG + chr4_2:71311863-71311882 Msa0620000:intron 45.0%
TAACCGTGACATAACCGGAT+GGG - chr4_2:71311880-71311899 None:intergenic 45.0%
TGACGTAACCGTGACATAAC+CGG - chr4_2:71311885-71311904 None:intergenic 45.0%
GTGTACCTCTTACGTAAGTG+CGG + chr4_2:71312498-71312517 Msa0620000:intron 45.0%
TAGGGATTCTTGCTGAATCC+CGG + chr4_2:71312554-71312573 Msa0620000:intron 45.0%
! TACAACAAAAGCACATCCCC+GGG + chr4_2:71312688-71312707 Msa0620000:intron 45.0%
GAACCAATTGTAGGTAGTGC+TGG + chr4_2:71312901-71312920 Msa0620000:intron 45.0%
GTATTGGAAGATGATCCGGT+TGG + chr4_2:71312928-71312947 Msa0620000:intron 45.0%
! ACATATGGGTGAGGCATCTT+GGG - chr4_2:71313017-71313036 None:intergenic 45.0%
! AACATATGGGTGAGGCATCT+TGG - chr4_2:71313018-71313037 None:intergenic 45.0%
AGTCACAGGTGGTGTATACA+GGG - chr4_2:71313125-71313144 None:intergenic 45.0%
AAGTCACAGGTGGTGTATAC+AGG - chr4_2:71313126-71313145 None:intergenic 45.0%
!! ATTTGGTGTCAAGTCACAGG+TGG - chr4_2:71313136-71313155 None:intergenic 45.0%
ACCTGTGACTTGACACCAAA+TGG + chr4_2:71313135-71313154 Msa0620000:intron 45.0%
GAGGCGACTTAAAGGGTAAA+GGG - chr4_2:71313164-71313183 None:intergenic 45.0%
CATCATTCGAGGCGACTTAA+AGG - chr4_2:71313172-71313191 None:intergenic 45.0%
ATGGCACTTCTCATCATTCG+AGG - chr4_2:71313183-71313202 None:intergenic 45.0%
CCTTATTGGAACCGAACAGA+GGG + chr4_2:71313225-71313244 Msa0620000:intron 45.0%
TGTGGTTCCTCATGACTTTG+GGG + chr4_2:71313263-71313282 Msa0620000:intron 45.0%
AAACATGCCCCAAAGTCATG+AGG - chr4_2:71313273-71313292 None:intergenic 45.0%
TATGTTACATGACCCACGTG+AGG - chr4_2:71313394-71313413 None:intergenic 45.0%
! TGGGAATGCATTTTCTGTGG+TGG - chr4_2:71313556-71313575 None:intergenic 45.0%
! AGGTGGGAATGCATTTTCTG+TGG - chr4_2:71313559-71313578 None:intergenic 45.0%
! CGAGGACTGTTTTATGACGT+TGG + chr4_2:71313619-71313638 Msa0620000:intron 45.0%
CTTGCATAGTATCCACCTTC+AGG - chr4_2:71313652-71313671 None:intergenic 45.0%
CTGAAGGTGGATACTATGCA+AGG + chr4_2:71313650-71313669 Msa0620000:intron 45.0%
TTCAGAGTAGAAGGATGAGC+CGG - chr4_2:71313761-71313780 None:intergenic 45.0%
! TGTCGCCTTTTCAGAGTAGA+AGG - chr4_2:71313770-71313789 None:intergenic 45.0%
CACAGCCAGTTTGAATAGTC+AGG - chr4_2:71313976-71313995 None:intergenic 45.0%
! GTGTTTTGTCTATGCCCACT+TGG + chr4_2:71314112-71314131 Msa0620000:intron 45.0%
TTTGTCTATGCCCACTTGGA+TGG + chr4_2:71314116-71314135 Msa0620000:intron 45.0%
TTGTCTATGCCCACTTGGAT+GGG + chr4_2:71314117-71314136 Msa0620000:intron 45.0%
CCACAGCTTCAACCAATCTT+GGG - chr4_2:71314153-71314172 None:intergenic 45.0%
ACCACAGCTTCAACCAATCT+TGG - chr4_2:71314154-71314173 None:intergenic 45.0%
ATCTTCCCATGGTATTGCGT+CGG - chr4_2:71314227-71314246 None:intergenic 45.0%
AACACCCCAATATCTTCCCA+TGG - chr4_2:71314238-71314257 None:intergenic 45.0%
TGAGCAAGATGTTCCCAAGT+TGG + chr4_2:71314264-71314283 Msa0620000:intron 45.0%
! CAATTCAAGCTTTTCTCCCC+TGG - chr4_2:71314469-71314488 None:intergenic 45.0%
CAGGGGAGAAAAGCTTGAAT+TGG + chr4_2:71314467-71314486 Msa0620000:intron 45.0%
! AAGGTTTAAGGTCACCGACA+GGG - chr4_2:71314501-71314520 None:intergenic 45.0%
TGCTTTCAAAACGTGTTCCC+TGG + chr4_2:71314723-71314742 Msa0620000:intron 45.0%
GGATTCCAAGTGGTTACCAT+TGG + chr4_2:71315076-71315095 Msa0620000:intron 45.0%
! CGTTTTCTCTTCTTCTCCGA+CGG + chr4_2:71316042-71316061 Msa0620000:intron 45.0%
ATGAATTTGCCTATGGCCGT+CGG - chr4_2:71316061-71316080 None:intergenic 45.0%
! ATTTGAGTTCGCGAGCAGAT+CGG - chr4_2:71316726-71316745 None:intergenic 45.0%
TACGTTGGATGCAATGACTG+AGG - chr4_2:71317046-71317065 None:intergenic 45.0%
! GTCGATTCAACTAGGACTTG+TGG + chr4_2:71317082-71317101 Msa0620000:intron 45.0%
! GACAGCAGTTGGTGCAAAAA+TGG + chr4_2:71317861-71317880 Msa0620000:intron 45.0%
GAAGAAGAAGATGAAGGTGG+TGG - chr4_2:71317965-71317984 None:intergenic 45.0%
TTGATGCTGTTGAGCTTCGT+AGG + chr4_2:71318275-71318294 Msa0620000:CDS 45.0%
CCCTGATTGGACCTAATCTA+AGG - chr4_2:71318699-71318718 None:intergenic 45.0%
AGATTAGGTCCAATCAGGGA+TGG + chr4_2:71318700-71318719 Msa0620000:intron 45.0%
GAGCTGGACATATATGATGG+CGG + chr4_2:71318722-71318741 Msa0620000:intron 45.0%
AGCTGGACATATATGATGGC+GGG + chr4_2:71318723-71318742 Msa0620000:intron 45.0%
CCGGTAATACAGCAGATTTG+CGG - chr4_2:71318838-71318857 None:intergenic 45.0%
CCGCAAATCTGCTGTATTAC+CGG + chr4_2:71318835-71318854 Msa0620000:intron 45.0%
AGTTAGTAACCACTGGGGTT+GGG - chr4_2:71319456-71319475 None:intergenic 45.0%
TCTGGCAGTTAGTAACCACT+GGG - chr4_2:71319462-71319481 None:intergenic 45.0%
TTCTGGCAGTTAGTAACCAC+TGG - chr4_2:71319463-71319482 None:intergenic 45.0%
! GCTCTACAAATGGGCTTAAC+TGG - chr4_2:71319540-71319559 None:intergenic 45.0%
GTAGAGCTTAGGTCTAGATC+TGG + chr4_2:71319553-71319572 Msa0620000:intron 45.0%
AGACAACGCTGTTCTTCAAG+GGG - chr4_2:71319596-71319615 None:intergenic 45.0%
GAAGACAACGCTGTTCTTCA+AGG - chr4_2:71319598-71319617 None:intergenic 45.0%
GAAGAACAGCGTTGTCTTCA+AGG + chr4_2:71319599-71319618 Msa0620000:intron 45.0%
GACTTCAGATAGCAACACTC+GGG - chr4_2:71319716-71319735 None:intergenic 45.0%
TCCGATTCCATAATTCCAGC+TGG - chr4_2:71319778-71319797 None:intergenic 45.0%
ATACAGAGATAGTGACCACG+AGG + chr4_2:71319801-71319820 Msa0620000:intron 45.0%
! CTCCCTATGTACTTGGTCTT+TGG - chr4_2:71319889-71319908 None:intergenic 45.0%
! TTGTGACAGCTCTCTAGGAA+AGG - chr4_2:71319959-71319978 None:intergenic 45.0%
GCTGTCACAATCGAGTTTCA+AGG + chr4_2:71319969-71319988 Msa0620000:intron 45.0%
GAAAGATAGCTATGAGGGCA+AGG + chr4_2:71320065-71320084 Msa0620000:intron 45.0%
!! CTACAGGTTTTGTGTTGCAG+GGG - chr4_2:71320093-71320112 None:intergenic 45.0%
!! CTCGGTGTCTACTAAAGTTC+AGG - chr4_2:71320432-71320451 None:intergenic 45.0%
CTGAACTTTAGTAGACACCG+AGG + chr4_2:71320430-71320449 Msa0620000:intron 45.0%
CTCGATACAGTTCCTGATGT+TGG + chr4_2:71320486-71320505 Msa0620000:intron 45.0%
!! TGTGTTAGGATACTGGCTCT+GGG - chr4_2:71320829-71320848 None:intergenic 45.0%
!! AGGTAGTGCTGGTGATGTAT+TGG + chr4_2:71321170-71321189 Msa0620000:intron 45.0%
GTATTGGAAGATGATCCGGT+TGG + chr4_2:71312928-71312947 Msa0620000:intron 45.0%
CAGCAGCAAACATATGGGTT+AGG - chr4_2:71321284-71321303 None:intergenic 45.0%
CTGCTGAGATCTTTATGCAC+CGG + chr4_2:71321298-71321317 Msa0620000:CDS 45.0%
CAGCGCTAGATAAGAGAAAC+CGG - chr4_2:71321320-71321339 None:intergenic 45.0%
AGTCACAGGTGGTGTATACA+GGG - chr4_2:71313125-71313144 None:intergenic 45.0%
AAGTCACAGGTGGTGTATAC+AGG - chr4_2:71313126-71313145 None:intergenic 45.0%
!! ATTTGGTGTCAAGTCACAGG+TGG - chr4_2:71313136-71313155 None:intergenic 45.0%
ACCTGTGACTTGACACCAAA+TGG + chr4_2:71313135-71313154 Msa0620000:intron 45.0%
GAGGCGACTTAAAGGGTAAA+GGG - chr4_2:71313164-71313183 None:intergenic 45.0%
CATCATTCGAGGCGACTTAA+AGG - chr4_2:71313172-71313191 None:intergenic 45.0%
ATGGCACTTCTCATCATTCG+AGG - chr4_2:71313183-71313202 None:intergenic 45.0%
CCTTATTGGAACCGAACAGA+GGG + chr4_2:71313225-71313244 Msa0620000:intron 45.0%
TGTGGTTCCTCATGACTTTG+GGG + chr4_2:71313263-71313282 Msa0620000:intron 45.0%
AAACATGCCCCAAAGTCATG+AGG - chr4_2:71313273-71313292 None:intergenic 45.0%
CTGCCCAAATGTTTGAACCA+AGG - chr4_2:71321737-71321756 None:intergenic 45.0%
TGGTTCAAACATTTGGGCAG+AGG + chr4_2:71321737-71321756 Msa0620000:CDS 45.0%
! TGGGTATGCATTTTCTGTGG+TGG - chr4_2:71321811-71321830 None:intergenic 45.0%
! GGGTCTTATCAGGAATCAAG+TGG - chr4_2:71321831-71321850 None:intergenic 45.0%
GATGTTGGAAATGACCCTGA+AGG + chr4_2:71321889-71321908 Msa0620000:CDS 45.0%
! TCCATTGCCTTTTCGCCTTT+CGG - chr4_2:71322037-71322056 None:intergenic 45.0%
CACAGACAGATTGACCAGTT+AGG - chr4_2:71322273-71322292 None:intergenic 45.0%
! GTGTTTTGTCTATGCCCACT+TGG + chr4_2:71314112-71314131 Msa0620000:intron 45.0%
TTTGTCTATGCCCACTTGGA+TGG + chr4_2:71314116-71314135 Msa0620000:intron 45.0%
TTGTCTATGCCCACTTGGAT+GGG + chr4_2:71314117-71314136 Msa0620000:intron 45.0%
CCACAGCTTCAACCAATCTT+GGG - chr4_2:71314153-71314172 None:intergenic 45.0%
ACCACAGCTTCAACCAATCT+TGG - chr4_2:71314154-71314173 None:intergenic 45.0%
TGCTTGCTTCATAGAAGGGT+TGG - chr4_2:71322645-71322664 None:intergenic 45.0%
AAGGGGAGAAGAGCTTGAAT+TGG + chr4_2:71322765-71322784 Msa0620000:CDS 45.0%
AAGAGCTTGAATTGGACTGC+TGG + chr4_2:71322773-71322792 Msa0620000:CDS 45.0%
! AAGGTTTAAGGTCGCCAACA+GGG - chr4_2:71322799-71322818 None:intergenic 45.0%
CCTCCCCAAAATGTTCATAG+GGG + chr4_2:71322875-71322894 Msa0620000:three_prime_UTR 45.0%
! CGACCCCTATGAACATTTTG+GGG - chr4_2:71322881-71322900 None:intergenic 45.0%
! CCGACCCCTATGAACATTTT+GGG - chr4_2:71322882-71322901 None:intergenic 45.0%
CCCAAAATGTTCATAGGGGT+CGG + chr4_2:71322879-71322898 Msa0620000:three_prime_UTR 45.0%
! ACCGACCCCTATGAACATTT+TGG - chr4_2:71322883-71322902 None:intergenic 45.0%
!! TCCACAAAAAAAGGGCACCT+CGG - chr4_2:71322908-71322927 None:intergenic 45.0%
TTTCTCTTGTGTCACGGCAT+TGG + chr4_2:71323048-71323067 Msa0620000:three_prime_UTR 45.0%
GTGTCTGTGTGTGTGGATTT+AGG + chr4_2:71323259-71323278 Msa0620000:three_prime_UTR 45.0%
AGTTTATTCTCCAGGTAGGG+TGG + chr4_2:71323503-71323522 Msa0620000:three_prime_UTR 45.0%
!! AAAAGTAAAAAAATTATTAA+TGG - chr4_2:71317222-71317241 None:intergenic 5.0%
!!! ATATGTTATTTAAAATTTAT+TGG + chr4_2:71321574-71321593 Msa0620000:intron 5.0%
TTGATGCTGTGGAGTTGCAC+AGG + chr4_2:71311313-71311332 Msa0620000:intron 50.0%
TCACCCATCCGGTTATGTCA+CGG + chr4_2:71311874-71311893 Msa0620000:intron 50.0%
GTAACCGTGACATAACCGGA+TGG - chr4_2:71311881-71311900 None:intergenic 50.0%
TGCATCCGCACTTACGTAAG+AGG - chr4_2:71312506-71312525 None:intergenic 50.0%
AGGGATTCTTGCTGAATCCC+GGG + chr4_2:71312555-71312574 Msa0620000:intron 50.0%
! ACAACAAAAGCACATCCCCG+GGG + chr4_2:71312689-71312708 Msa0620000:intron 50.0%
ACTTAAAACTCCAGGACCCC+GGG - chr4_2:71312708-71312727 None:intergenic 50.0%
GACTTAAAACTCCAGGACCC+CGG - chr4_2:71312709-71312728 None:intergenic 50.0%
TCGCCAGCACTACCTACAAT+TGG - chr4_2:71312907-71312926 None:intergenic 50.0%
!! AGGTAGTGCTGGCGATGTAT+TGG + chr4_2:71312912-71312931 Msa0620000:intron 50.0%
TGGAAGATGATCCGGTTGGA+AGG + chr4_2:71312932-71312951 Msa0620000:intron 50.0%
TGATCCGGTTGGAAGGTTGA+AGG + chr4_2:71312939-71312958 Msa0620000:intron 50.0%
CAGCAGCAAACATATGGGTG+AGG - chr4_2:71313026-71313045 None:intergenic 50.0%
GTCACAGGTGGTGTATACAG+GGG - chr4_2:71313124-71313143 None:intergenic 50.0%
!! GCCATTTGGTGTCAAGTCAC+AGG - chr4_2:71313139-71313158 None:intergenic 50.0%
AAGGGTAAAGGGAGGCCATT+TGG - chr4_2:71313153-71313172 None:intergenic 50.0%
GCGACTTAAAGGGTAAAGGG+AGG - chr4_2:71313161-71313180 None:intergenic 50.0%
CGAGGCGACTTAAAGGGTAA+AGG - chr4_2:71313165-71313184 None:intergenic 50.0%
! GCCTTATTGGAACCGAACAG+AGG + chr4_2:71313224-71313243 Msa0620000:intron 50.0%
CCCTCTGTTCGGTTCCAATA+AGG - chr4_2:71313228-71313247 None:intergenic 50.0%
! AATGATCGGCTCCCTCTGTT+CGG - chr4_2:71313239-71313258 None:intergenic 50.0%
GGGAGCCGATCATTTCTTTG+TGG + chr4_2:71313245-71313264 Msa0620000:intron 50.0%
! TTCTGTGGTGGAGCATATGG+AGG - chr4_2:71313544-71313563 None:intergenic 50.0%
GACGTTGGAAATGACCCTGA+AGG + chr4_2:71313634-71313653 Msa0620000:intron 50.0%
GTTGGAAATGACCCTGAAGG+TGG + chr4_2:71313637-71313656 Msa0620000:intron 50.0%
AGGTGCAAGAGCAGCAGTAT+GGG + chr4_2:71314012-71314031 Msa0620000:intron 50.0%
AACCAATCTTGGGCTCCAAG+GGG - chr4_2:71314143-71314162 None:intergenic 50.0%
CAACCAATCTTGGGCTCCAA+GGG - chr4_2:71314144-71314163 None:intergenic 50.0%
TCAACCAATCTTGGGCTCCA+AGG - chr4_2:71314145-71314164 None:intergenic 50.0%
! CCCAAGATTGGTTGAAGCTG+TGG + chr4_2:71314150-71314169 Msa0620000:intron 50.0%
! CATGGTATTGCGTCGGCAAA+CGG - chr4_2:71314220-71314239 None:intergenic 50.0%
GTTTGCCGACGCAATACCAT+GGG + chr4_2:71314219-71314238 Msa0620000:intron 50.0%
TGGTCGGATCGATGTGAGTA+TGG - chr4_2:71314293-71314312 None:intergenic 50.0%
! CAAGGTTTAAGGTCACCGAC+AGG - chr4_2:71314502-71314521 None:intergenic 50.0%
CTGTCGGTGACCTTAAACCT+TGG + chr4_2:71314500-71314519 Msa0620000:intron 50.0%
AACGTGTTCCCTGGTCTAGT+AGG + chr4_2:71314732-71314751 Msa0620000:intron 50.0%
GGTAATTTGGGTCACGGCTT+TGG + chr4_2:71314792-71314811 Msa0620000:intron 50.0%
! GAGCTCGGCTCGATAAGATT+TGG - chr4_2:71316809-71316828 None:intergenic 50.0%
TAACCCCAACAGACAGCAGT+TGG + chr4_2:71317850-71317869 Msa0620000:intron 50.0%
TGCACCAACTGCTGTCTGTT+GGG - chr4_2:71317857-71317876 None:intergenic 50.0%
TTGCACCAACTGCTGTCTGT+TGG - chr4_2:71317858-71317877 None:intergenic 50.0%
! GCTGGACATATATGATGGCG+GGG + chr4_2:71318724-71318743 Msa0620000:intron 50.0%
CCAAACTTACGTCCATCCCT+GGG + chr4_2:71319129-71319148 Msa0620000:intron 50.0%
AGTTGCTGACATTGGACCCA+GGG - chr4_2:71319148-71319167 None:intergenic 50.0%
CGGCCCTATTTATAACCGCA+AGG - chr4_2:71319242-71319261 None:intergenic 50.0%
TGTGCACATTGAGAGGGAGT+AGG - chr4_2:71319301-71319320 None:intergenic 50.0%
TACTCCCTCTCAATGTGCAC+AGG + chr4_2:71319300-71319319 Msa0620000:intron 50.0%
GTGTCCTGTGCACATTGAGA+GGG - chr4_2:71319307-71319326 None:intergenic 50.0%
TGTGTCCTGTGCACATTGAG+AGG - chr4_2:71319308-71319327 None:intergenic 50.0%
CAGTTAGTAACCACTGGGGT+TGG - chr4_2:71319457-71319476 None:intergenic 50.0%
CTGGCAGTTAGTAACCACTG+GGG - chr4_2:71319461-71319480 None:intergenic 50.0%
GAAAAGGAAAGAGGCGGTCA+TGG - chr4_2:71319488-71319507 None:intergenic 50.0%
AGGGTGGAAAAGGAAAGAGG+CGG - chr4_2:71319494-71319513 None:intergenic 50.0%
TTCAAGGGGTGGGTCATGTT+AGG - chr4_2:71319582-71319601 None:intergenic 50.0%
AACGCTGTTCTTCAAGGGGT+GGG - chr4_2:71319592-71319611 None:intergenic 50.0%
CAGCGTTGTCTTCAAGGATG+AGG + chr4_2:71319605-71319624 Msa0620000:intron 50.0%
TCCTTCCCAGCTATGACTAG+AGG + chr4_2:71319658-71319677 Msa0620000:intron 50.0%
CCTTCCCAGCTATGACTAGA+GGG + chr4_2:71319659-71319678 Msa0620000:intron 50.0%
CAGTCCCTCTAGTCATAGCT+GGG - chr4_2:71319666-71319685 None:intergenic 50.0%
TCAGTCCCTCTAGTCATAGC+TGG - chr4_2:71319667-71319686 None:intergenic 50.0%
CTCGATTGTGACAGCTCTCT+AGG - chr4_2:71319964-71319983 None:intergenic 50.0%
CAACGCTACAGGGTTGTTGT+TGG - chr4_2:71320316-71320335 None:intergenic 50.0%
ACTCTCGGCTCATGTGTATG+TGG + chr4_2:71320406-71320425 Msa0620000:intron 50.0%
!! GGCAAGACACTGAAAGCGTT+TGG - chr4_2:71320632-71320651 None:intergenic 50.0%
TTGTGGGTGTGCCCAGATAA+TGG - chr4_2:71320653-71320672 None:intergenic 50.0%
!! GTGTTAGGATACTGGCTCTG+GGG - chr4_2:71320828-71320847 None:intergenic 50.0%
!! GTGTGTTAGGATACTGGCTC+TGG - chr4_2:71320830-71320849 None:intergenic 50.0%
! AAGGGGGTGTGTTAGGATAC+TGG - chr4_2:71320836-71320855 None:intergenic 50.0%
TATCCTAACACACCCCCTTG+CGG + chr4_2:71320837-71320856 Msa0620000:intron 50.0%
TGTGCACATCCTTGGTCACT+TGG + chr4_2:71320962-71320981 Msa0620000:intron 50.0%
TGGAAGATGATCCGGTTGGA+AGG + chr4_2:71312932-71312951 Msa0620000:intron 50.0%
TGATCCGGTTGGAAGGTTGA+AGG + chr4_2:71312939-71312958 Msa0620000:intron 50.0%
GTCACAGGTGGTGTATACAG+GGG - chr4_2:71313124-71313143 None:intergenic 50.0%
!! GCCATTTGGTGTCAAGTCAC+AGG - chr4_2:71313139-71313158 None:intergenic 50.0%
AAGGGTAAAGGGAGGCCATT+TGG - chr4_2:71313153-71313172 None:intergenic 50.0%
GCGACTTAAAGGGTAAAGGG+AGG - chr4_2:71313161-71313180 None:intergenic 50.0%
CGAGGCGACTTAAAGGGTAA+AGG - chr4_2:71313165-71313184 None:intergenic 50.0%
! GCCTTATTGGAACCGAACAG+AGG + chr4_2:71313224-71313243 Msa0620000:intron 50.0%
CCCTCTGTTCGGTTCCAATA+AGG - chr4_2:71313228-71313247 None:intergenic 50.0%
! AATGATCGGCTCCCTCTGTT+CGG - chr4_2:71313239-71313258 None:intergenic 50.0%
GGGAGCCGATCATTTCTTTG+TGG + chr4_2:71313245-71313264 Msa0620000:intron 50.0%
TGGTGGAGCATATGGAGGAA+TGG - chr4_2:71313539-71313558 None:intergenic 50.0%
! TTCTGTGGTGGAGCATATGG+AGG - chr4_2:71313544-71313563 None:intergenic 50.0%
TGATTCCTGATAAGACCCCC+AGG + chr4_2:71321833-71321852 Msa0620000:CDS 50.0%
! ATTGACCTGGGGGTCTTATC+AGG - chr4_2:71321841-71321860 None:intergenic 50.0%
GTTGGAAATGACCCTGAAGG+TGG + chr4_2:71313637-71313656 Msa0620000:intron 50.0%
ACCGAAAGGCGAAAAGGCAA+TGG + chr4_2:71322033-71322052 Msa0620000:intron 50.0%
! TAACAGAGGTGCAAGAGCAG+CGG + chr4_2:71322304-71322323 Msa0620000:intron 50.0%
AGCGGTGTGGGAGAACTTTA+AGG + chr4_2:71322322-71322341 Msa0620000:CDS 50.0%
TCAACCAATCTTGGGCTCCA+GGG - chr4_2:71314145-71314164 None:intergenic 50.0%
TTCAACCAATCTTGGGCTCC+AGG - chr4_2:71314146-71314165 None:intergenic 50.0%
! CCCAAGATTGGTTGAAGCTG+TGG + chr4_2:71314150-71314169 Msa0620000:intron 50.0%
! CACGGTATTGCATCGGCAAA+CGG - chr4_2:71322518-71322537 None:intergenic 50.0%
GTTTGCCGATGCAATACCGT+GGG + chr4_2:71322517-71322536 Msa0620000:CDS 50.0%
CTCTTCCCACGGTATTGCAT+CGG - chr4_2:71322525-71322544 None:intergenic 50.0%
GCAATACCGTGGGAAGAGAT+CGG + chr4_2:71322527-71322546 Msa0620000:CDS 50.0%
CAATACCGTGGGAAGAGATC+GGG + chr4_2:71322528-71322547 Msa0620000:CDS 50.0%
AATACCGTGGGAAGAGATCG+GGG + chr4_2:71322529-71322548 Msa0620000:CDS 50.0%
TGAGCAGGATGTTCCCAAGT+TGG + chr4_2:71322562-71322581 Msa0620000:CDS 50.0%
TGGTGGGATCGATGTGAGTA+TGG - chr4_2:71322591-71322610 None:intergenic 50.0%
ATCTCCTGATTGTGCGGGTT+GGG - chr4_2:71322678-71322697 None:intergenic 50.0%
! AAGGCATCTCCTGATTGTGC+GGG - chr4_2:71322683-71322702 None:intergenic 50.0%
!! GAAGGCATCTCCTGATTGTG+CGG - chr4_2:71322684-71322703 None:intergenic 50.0%
! CAAGGTTTAAGGTCGCCAAC+AGG - chr4_2:71322800-71322819 None:intergenic 50.0%
CTGTTGGCGACCTTAAACCT+TGG + chr4_2:71322798-71322817 Msa0620000:CDS 50.0%
!! CCCCTATGAACATTTTGGGG+AGG - chr4_2:71322878-71322897 None:intergenic 50.0%
!!! ACCGAGGTGCCCTTTTTTTG+TGG + chr4_2:71322904-71322923 Msa0620000:three_prime_UTR 50.0%
AAGCTATCTACCACCCTACC+TGG - chr4_2:71323516-71323535 None:intergenic 50.0%
AGGTAGGGTGGTAGATAGCT+TGG + chr4_2:71323515-71323534 Msa0620000:three_prime_UTR 50.0%
AGACATGCCGACAGCGTGTT+GGG - chr4_2:71311803-71311822 None:intergenic 55.0%
GGGATTCTTGCTGAATCCCG+GGG + chr4_2:71312556-71312575 Msa0620000:intron 55.0%
CTTAAAACTCCAGGACCCCG+GGG - chr4_2:71312707-71312726 None:intergenic 55.0%
TAGCACGCTGTAGCAGTGGA+AGG - chr4_2:71313459-71313478 None:intergenic 55.0%
AAGGTAGCACGCTGTAGCAG+TGG - chr4_2:71313463-71313482 None:intergenic 55.0%
ACTGCTACAGCGTGCTACCT+TGG + chr4_2:71313462-71313481 Msa0620000:intron 55.0%
GAGGTGCAAGAGCAGCAGTA+TGG + chr4_2:71314011-71314030 Msa0620000:intron 55.0%
CGTTTGCCGACGCAATACCA+TGG + chr4_2:71314218-71314237 Msa0620000:intron 55.0%
TTCCCTCAACCTGCTCAAGC+TGG + chr4_2:71314373-71314392 Msa0620000:intron 55.0%
! CTCCAGCTTGAGCAGGTTGA+GGG - chr4_2:71314378-71314397 None:intergenic 55.0%
TCTCCAGCTTGAGCAGGTTG+AGG - chr4_2:71314379-71314398 None:intergenic 55.0%
! AAAGCGTCTCCAGCTTGAGC+AGG - chr4_2:71314385-71314404 None:intergenic 55.0%
AATTGGACTGCTGGCCCTGT+CGG + chr4_2:71314484-71314503 Msa0620000:intron 55.0%
CAGGCACTCCTACTAGACCA+GGG - chr4_2:71314743-71314762 None:intergenic 55.0%
ACAGGCACTCCTACTAGACC+AGG - chr4_2:71314744-71314763 None:intergenic 55.0%
CAGCTCAGGTTCGGCTCATT+TGG - chr4_2:71315688-71315707 None:intergenic 55.0%
TCTTCTTCTCCGACGGCCAT+AGG + chr4_2:71316049-71316068 Msa0620000:intron 55.0%
AGTTCGCGAGCAGATCGGTT+CGG - chr4_2:71316721-71316740 None:intergenic 55.0%
GAACCGAACTCGTCTGAGCT+CGG - chr4_2:71316824-71316843 None:intergenic 55.0%
GCACCAACTGCTGTCTGTTG+GGG - chr4_2:71317856-71317875 None:intergenic 55.0%
TGTCCAGCTCCATCCCTGAT+TGG - chr4_2:71318712-71318731 None:intergenic 55.0%
GCCAAACTTACGTCCATCCC+TGG + chr4_2:71319128-71319147 Msa0620000:intron 55.0%
CCCAGGGATGGACGTAAGTT+TGG - chr4_2:71319132-71319151 None:intergenic 55.0%
GAGTTGCTGACATTGGACCC+AGG - chr4_2:71319149-71319168 None:intergenic 55.0%
AAGAGGCGGTCATGGAGTTC+TGG - chr4_2:71319480-71319499 None:intergenic 55.0%
CAACGCTGTTCTTCAAGGGG+TGG - chr4_2:71319593-71319612 None:intergenic 55.0%
CCCTCTAGTCATAGCTGGGA+AGG - chr4_2:71319662-71319681 None:intergenic 55.0%
AACCAATCTTGGGCTCCAGG+GGG - chr4_2:71322441-71322460 None:intergenic 55.0%
CAACCAATCTTGGGCTCCAG+GGG - chr4_2:71322442-71322461 None:intergenic 55.0%
CGTTTGCCGATGCAATACCG+TGG + chr4_2:71322516-71322535 Msa0620000:CDS 55.0%
AACACCCCGATCTCTTCCCA+CGG - chr4_2:71322536-71322555 None:intergenic 55.0%
! CGGGGTGTTTGTTGATGAGC+AGG + chr4_2:71322547-71322566 Msa0620000:CDS 55.0%
! TCTCCTGATTGTGCGGGTTG+GGG - chr4_2:71322677-71322696 None:intergenic 55.0%
CATCTCCTGATTGTGCGGGT+TGG - chr4_2:71322679-71322698 None:intergenic 55.0%
CACGGAAGTTGCCACATGAC+AGG + chr4_2:71322726-71322745 Msa0620000:CDS 55.0%
AATTGGACTGCTGGCCCTGT+TGG + chr4_2:71314484-71314503 Msa0620000:intron 55.0%
TTCATAGGGGTCGGTAACCG+AGG + chr4_2:71322888-71322907 Msa0620000:three_prime_UTR 55.0%
CAGACATGCCGACAGCGTGT+TGG - chr4_2:71311804-71311823 None:intergenic 60.0%
TGCTGAATCCCGGGGCTTTC+TGG + chr4_2:71312564-71312583 Msa0620000:intron 60.0%
!! ATCCCGGGGCTTTCTGGCTT+CGG + chr4_2:71312570-71312589 Msa0620000:intron 60.0%
ACTCCGAAGCCAGAAAGCCC+CGG - chr4_2:71312576-71312595 None:intergenic 60.0%
TCCAAGGGGCCCATCCAAGT+GGG - chr4_2:71314129-71314148 None:intergenic 60.0%
CACGGAAGTTGCCGCATGAC+AGG + chr4_2:71314428-71314447 Msa0620000:intron 60.0%
!! GCAGATCGGTTCGGCTCGTT+AGG - chr4_2:71316712-71316731 None:intergenic 60.0%
GAGCCGAGCTCAGACGAGTT+CGG + chr4_2:71316818-71316837 Msa0620000:intron 60.0%
GGTCCAATCAGGGATGGAGC+TGG + chr4_2:71318706-71318725 Msa0620000:intron 60.0%
GCTGACATTGGACCCAGGGA+TGG - chr4_2:71319144-71319163 None:intergenic 60.0%
AATTCCCTGCCCAACCCCAG+TGG + chr4_2:71319444-71319463 Msa0620000:intron 60.0%
GTAACCACTGGGGTTGGGCA+GGG - chr4_2:71319451-71319470 None:intergenic 60.0%
AGTAACCACTGGGGTTGGGC+AGG - chr4_2:71319452-71319471 None:intergenic 60.0%
! CTTCCGCAAGGGGGTGTGTT+AGG - chr4_2:71320843-71320862 None:intergenic 60.0%
CTAACACACCCCCTTGCGGA+AGG + chr4_2:71320841-71320860 Msa0620000:intron 60.0%
GAGGGATTCTTCCGCTGCTG+CGG + chr4_2:71321704-71321723 Msa0620000:CDS 60.0%
AGGTGCAAGAGCAGCGGTGT+GGG + chr4_2:71322310-71322329 Msa0620000:CDS 60.0%
TTCCCCCAACCCGCACAATC+AGG + chr4_2:71322671-71322690 Msa0620000:CDS 60.0%
!! CTCCTGATTGTGCGGGTTGG+GGG - chr4_2:71322676-71322695 None:intergenic 60.0%
CTCCGAAGCCAGAAAGCCCC+GGG - chr4_2:71312575-71312594 None:intergenic 65.0%
AAAGCACATCCCCGGGGTCC+TGG + chr4_2:71312695-71312714 Msa0620000:intron 65.0%
CTCCAAGGGGCCCATCCAAG+TGG - chr4_2:71314130-71314149 None:intergenic 65.0%
GGCCCCTTGGAGCCCAAGAT+TGG + chr4_2:71314138-71314157 Msa0620000:intron 65.0%
AAGGTAGCACGCCGCAGCAG+CGG - chr4_2:71321718-71321737 None:intergenic 65.0%
GAGGTGCAAGAGCAGCGGTG+TGG + chr4_2:71322309-71322328 Msa0620000:intron 65.0%
TCCAGGGGGCCCATCCAAGT+GGG - chr4_2:71322427-71322446 None:intergenic 65.0%
GCCCACTTGGATGGGCCCCT+TGG + chr4_2:71314125-71314144 Msa0620000:intron 70.0%
GCTGCTGCGGCGTGCTACCT+TGG + chr4_2:71321717-71321736 Msa0620000:CDS 70.0%
CTCCAGGGGGCCCATCCAAG+TGG - chr4_2:71322428-71322447 None:intergenic 70.0%
GGCCCCCTGGAGCCCAAGAT+TGG + chr4_2:71322436-71322455 Msa0620000:CDS 70.0%
GCCCACTTGGATGGGCCCCC+TGG + chr4_2:71322423-71322442 Msa0620000:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 71310890 71323543 71310890 ID=Msa0620000;Name=Msa0620000
chr4_2 mRNA 71310890 71323543 71310890 ID=Msa0620000-mRNA-1;Parent=Msa0620000;Name=Msa0620000-mRNA-1;_AED=0.24;_eAED=0.24;_QI=380|1|1|1|0.75|0.6|5|720|416
chr4_2 exon 71310890 71311187 71310890 ID=Msa0620000-mRNA-1:exon:21066;Parent=Msa0620000-mRNA-1
chr4_2 exon 71318135 71318322 71318135 ID=Msa0620000-mRNA-1:exon:21067;Parent=Msa0620000-mRNA-1
chr4_2 exon 71321172 71321560 71321172 ID=Msa0620000-mRNA-1:exon:21068;Parent=Msa0620000-mRNA-1
chr4_2 exon 71321685 71321926 71321685 ID=Msa0620000-mRNA-1:exon:21069;Parent=Msa0620000-mRNA-1
chr4_2 exon 71322310 71323543 71322310 ID=Msa0620000-mRNA-1:exon:21070;Parent=Msa0620000-mRNA-1
chr4_2 five_prime_UTR 71310890 71311187 71310890 ID=Msa0620000-mRNA-1:five_prime_utr;Parent=Msa0620000-mRNA-1
chr4_2 five_prime_UTR 71318135 71318216 71318135 ID=Msa0620000-mRNA-1:five_prime_utr;Parent=Msa0620000-mRNA-1
chr4_2 CDS 71318217 71318322 71318217 ID=Msa0620000-mRNA-1:cds;Parent=Msa0620000-mRNA-1
chr4_2 CDS 71321172 71321560 71321172 ID=Msa0620000-mRNA-1:cds;Parent=Msa0620000-mRNA-1
chr4_2 CDS 71321685 71321926 71321685 ID=Msa0620000-mRNA-1:cds;Parent=Msa0620000-mRNA-1
chr4_2 CDS 71322310 71322823 71322310 ID=Msa0620000-mRNA-1:cds;Parent=Msa0620000-mRNA-1
chr4_2 three_prime_UTR 71322824 71323543 71322824 ID=Msa0620000-mRNA-1:three_prime_utr;Parent=Msa0620000-mRNA-1
Gene Sequence

>Msa0620000

ATGGGTATTTGGAAATTGGGTTTTTTGGGGATCCTTTGTGTTGCTTTTCTCTTTACAATTGATGCTGTTGAGCTTCGTAGGAATCAACCTACTGAAAGAATTTCAGGTAGTGCTGGTGATGTATTGGAAGATGATCCGGTTGGAAGGTTGAAGGTTTTTGTTTATGAGCTTCCAAGCAAGTATAATAAGAAAATTTTGCAAAAGGACCCAAGATGCCTAACCCATATGTTTGCTGCTGAGATCTTTATGCACCGGTTTCTCTTATCTAGCGCTGTCCGAACCCTTAATCCTGAAGAAGCTGATTGGTTTTATACCCCTGTATACACCACCTGTGACTTGACACCAAATGGCCTCCCTTTACCCTTTAAGTCGCCTCGAATGATGAGAAGTGCCATACAACTTATTTCTTCAAATTGGCCTTATTGGAACCGAACAGAGGGAGCCGATCATTTCTTTGTGGTTCCTCATGACTTTGGGGCATGTTTCCATTACCAAGAAGAGAAGGCAATTGAAAGAGGGATTCTTCCGCTGCTGCGGCGTGCTACCTTGGTTCAAACATTTGGGCAGAGGAATCATGTGTGCTTGAAAGATGGCTCAATAACCATTCCTCCATATGCTCCACCACAGAAAATGCATACCCACTTGATTCCTGATAAGACCCCCAGGTCAATTTTTGTGTACTTCCGAGGACTGTTTTATGATGTTGGAAATGACCCTGAAGGTGGTTATTATGCAAGAGGTGCAAGAGCAGCGGTGTGGGAGAACTTTAAGGACAATCCACTATTTGACATTTCGACGGAGCATCCAACAACATATTACGAGGACATGCAACGAGCCGTGTTTTGTCTATGCCCACTTGGATGGGCCCCCTGGAGCCCAAGATTGGTTGAAGCTGTGGTATTTGGTTGCATTCCTGTTATTATTGCCGATGATATTGTTCTACCGTTTGCCGATGCAATACCGTGGGAAGAGATCGGGGTGTTTGTTGATGAGCAGGATGTTCCCAAGTTGGATACCATACTCACATCGATCCCACCAGAAGTTATACTAAGGAAACAAAGATTGCTTGCCAACCCTTCTATGAAGCAAGCAATGTTATTCCCCCAACCCGCACAATCAGGAGATGCCTTCCATCAAGTTCTAAATGGACTTGCACGGAAGTTGCCACATGACAGGAGTGTATTCTTGAAACAAGGGGAGAAGAGCTTGAATTGGACTGCTGGCCCTGTTGGCGACCTTAAACCTTGGTAG

Protein sequence

>Msa0620000

MGIWKLGFLGILCVAFLFTIDAVELRRNQPTERISGSAGDVLEDDPVGRLKVFVYELPSKYNKKILQKDPRCLTHMFAAEIFMHRFLLSSAVRTLNPEEADWFYTPVYTTCDLTPNGLPLPFKSPRMMRSAIQLISSNWPYWNRTEGADHFFVVPHDFGACFHYQEEKAIERGILPLLRRATLVQTFGQRNHVCLKDGSITIPPYAPPQKMHTHLIPDKTPRSIFVYFRGLFYDVGNDPEGGYYARGARAAVWENFKDNPLFDISTEHPTTYYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGVFVDEQDVPKLDTILTSIPPEVILRKQRLLANPSMKQAMLFPQPAQSGDAFHQVLNGLARKLPHDRSVFLKQGEKSLNWTAGPVGDLKPW*