AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene001804

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene001804.t1 MTR_8g031430 89.337 347 35 1 1 345 19 365 0.0 636
MS.gene001804.t1 MTR_8g031420 86.667 345 46 0 1 345 19 363 0.0 625
MS.gene001804.t1 MTR_8g031390 84.211 342 51 2 1 340 19 359 0.0 587
MS.gene001804.t1 MTR_8g031400 79.251 347 70 1 1 345 19 365 0.0 575
MS.gene001804.t1 MTR_8g031390 84.385 301 44 2 1 299 19 318 0.0 512
MS.gene001804.t1 MTR_8g022790 58.358 341 126 5 10 344 30 360 1.33e-130 377
MS.gene001804.t1 MTR_8g022810 50.882 340 158 4 13 344 37 375 9.20e-118 345
MS.gene001804.t1 MTR_2g044100 50.000 334 159 4 17 343 43 375 2.72e-109 325
MS.gene001804.t1 MTR_8g022810 45.294 340 124 6 13 344 37 322 1.73e-93 281
MS.gene001804.t1 MTR_1g024890 35.484 341 196 9 17 343 32 362 7.77e-55 184
MS.gene001804.t1 MTR_8g014910 34.056 323 186 11 17 323 32 343 3.53e-54 181
MS.gene001804.t1 MTR_8g074570 33.913 345 204 9 13 342 34 369 1.09e-53 181
MS.gene001804.t1 MTR_7g116520 34.311 341 200 9 17 343 34 364 7.82e-53 178
MS.gene001804.t1 MTR_3g005650 32.641 337 208 5 17 344 30 356 9.31e-53 178
MS.gene001804.t1 MTR_4g087985 35.202 321 181 10 17 318 36 348 1.67e-52 177
MS.gene001804.t1 MTR_7g116500 33.051 354 206 10 8 343 23 363 5.25e-52 176
MS.gene001804.t1 MTR_3g464730 32.609 322 198 9 17 326 28 342 5.97e-52 176
MS.gene001804.t1 MTR_1g079540 34.104 346 202 10 12 343 28 361 9.45e-52 176
MS.gene001804.t1 MTR_5g093090 33.918 342 200 8 17 342 28 359 1.36e-51 175
MS.gene001804.t1 MTR_3g082830 33.230 322 195 9 17 326 38 351 5.34e-51 173
MS.gene001804.t1 MTR_7g116570 33.430 344 205 9 14 343 31 364 1.34e-50 172
MS.gene001804.t1 MTR_5g084770 33.956 321 195 7 17 326 28 342 3.07e-50 171
MS.gene001804.t1 MTR_1g079530 34.211 342 193 10 17 343 29 353 5.80e-50 171
MS.gene001804.t1 MTR_4g056280 34.483 319 187 10 17 322 30 339 1.18e-49 170
MS.gene001804.t1 MTR_4g019880 33.043 345 205 9 14 342 29 363 2.43e-49 169
MS.gene001804.t1 MTR_2g033920 30.994 342 213 8 17 344 35 367 2.49e-49 169
MS.gene001804.t1 MTR_7g116510 32.471 348 212 8 10 343 18 356 4.93e-49 168
MS.gene001804.t1 MTR_2g033930 30.612 343 217 8 14 344 29 362 8.04e-49 168
MS.gene001804.t1 MTR_2g100620 31.343 335 203 11 17 335 31 354 1.17e-48 167
MS.gene001804.t1 MTR_3g024510 33.746 323 193 9 19 329 40 353 2.16e-48 167
MS.gene001804.t1 MTR_5g084750 33.636 330 198 10 10 326 22 343 5.59e-48 165
MS.gene001804.t1 MTR_3g052490 31.195 343 210 7 17 343 32 364 1.00e-47 165
MS.gene001804.t1 MTR_1g069175 33.236 343 201 11 17 342 33 364 1.01e-47 165
MS.gene001804.t1 MTR_3g052580 30.612 343 213 7 17 344 28 360 1.03e-47 166
MS.gene001804.t1 MTR_5g022640 32.609 322 198 8 17 326 43 357 1.38e-47 164
MS.gene001804.t1 MTR_3g052580 30.612 343 213 7 17 344 27 359 1.46e-47 166
MS.gene001804.t1 MTR_4g122200 29.738 343 218 8 17 345 35 368 1.47e-47 164
MS.gene001804.t1 MTR_2g084585 30.000 320 204 8 17 324 30 341 2.26e-47 164
MS.gene001804.t1 MTR_8g075230 31.579 323 199 9 17 326 36 349 3.72e-47 163
MS.gene001804.t1 MTR_1g025700 32.698 315 193 9 17 320 50 356 3.86e-47 164
MS.gene001804.t1 MTR_4g056160 30.240 334 214 7 1 323 15 340 1.09e-46 162
MS.gene001804.t1 MTR_2g015080 33.333 321 187 9 18 318 39 352 1.82e-46 162
MS.gene001804.t1 MTR_5g022630 30.154 325 205 9 17 327 43 359 2.30e-46 161
MS.gene001804.t1 MTR_5g084790 31.366 322 201 9 17 326 32 345 6.88e-46 160
MS.gene001804.t1 MTR_8g074580 30.809 383 206 10 13 342 40 416 7.92e-46 161
MS.gene001804.t1 MTR_6g021530 30.882 340 210 8 19 343 31 360 9.53e-46 160
MS.gene001804.t1 MTR_1g025720 32.177 317 196 9 17 322 37 345 2.35e-45 159
MS.gene001804.t1 MTR_1g025680 33.851 322 189 11 8 317 29 338 3.38e-45 160
MS.gene001804.t1 MTR_4g108690 29.907 321 203 7 16 323 26 337 3.38e-45 158
MS.gene001804.t1 MTR_7g008060 31.831 355 209 12 2 343 16 350 4.89e-45 157
MS.gene001804.t1 MTR_3g052480 33.236 343 202 9 17 342 33 365 7.13e-45 157
MS.gene001804.t1 MTR_3g435540 30.503 318 199 7 19 323 25 333 1.06e-44 157
MS.gene001804.t1 MTR_8g087890 31.579 323 200 8 19 329 33 346 1.46e-44 157
MS.gene001804.t1 MTR_1g025760 33.232 328 194 11 8 322 75 390 1.84e-44 157
MS.gene001804.t1 MTR_1g025780 32.727 330 198 11 2 320 30 346 1.96e-44 156
MS.gene001804.t1 MTR_2g461580 31.858 339 196 11 17 342 31 347 4.52e-44 155
MS.gene001804.t1 MTR_8g079050 30.484 351 209 12 17 344 37 375 2.17e-43 154
MS.gene001804.t1 MTR_5g074270 30.058 346 214 10 1 326 11 348 4.45e-43 153
MS.gene001804.t1 MTR_3g098270 31.686 344 212 8 17 345 34 369 6.53e-43 153
MS.gene001804.t1 MTR_3g005660 31.287 342 207 10 18 342 37 367 1.17e-42 152
MS.gene001804.t1 MTR_5g078210 30.000 340 211 10 3 328 12 338 1.31e-42 151
MS.gene001804.t1 MTR_0565s0010 28.488 344 226 7 1 332 16 351 1.76e-42 151
MS.gene001804.t1 MTR_5g009100 29.080 337 218 9 19 342 48 376 1.78e-42 151
MS.gene001804.t1 MTR_4g035353 28.657 335 211 9 17 338 31 350 3.39e-42 150
MS.gene001804.t1 MTR_2g017925 33.041 342 197 12 17 345 33 355 2.76e-41 148
MS.gene001804.t1 MTR_3g021460 31.287 342 194 10 17 342 31 347 4.33e-40 144
MS.gene001804.t1 MTR_7g116870 29.532 342 206 9 17 332 33 365 5.76e-40 145
MS.gene001804.t1 MTR_8g075220 29.321 324 206 10 17 324 40 356 2.69e-39 143
MS.gene001804.t1 MTR_3g114090 30.699 329 202 11 5 317 22 340 4.63e-39 142
MS.gene001804.t1 MTR_1g030220 32.164 342 193 11 17 329 40 371 4.77e-39 142
MS.gene001804.t1 MTR_0009s0250 30.267 337 213 11 13 342 29 350 5.95e-39 141
MS.gene001804.t1 MTR_2g015650 30.704 355 208 14 12 342 26 366 6.34e-39 142
MS.gene001804.t1 MTR_8g087870 32.716 324 187 10 18 329 30 334 1.80e-38 140
MS.gene001804.t1 MTR_1g030275 31.343 335 203 9 17 329 39 368 2.04e-38 141
MS.gene001804.t1 MTR_8g074560 29.513 349 213 12 17 344 31 367 2.41e-38 140
MS.gene001804.t1 MTR_1g025910 28.739 341 214 11 22 342 41 372 3.26e-38 140
MS.gene001804.t1 MTR_5g083040 27.554 323 209 9 17 322 32 346 5.39e-38 139
MS.gene001804.t1 MTR_8g075200 29.653 317 205 9 17 322 41 350 9.99e-38 139
MS.gene001804.t1 MTR_2g017965 30.233 344 208 11 18 345 34 361 2.81e-37 137
MS.gene001804.t1 MTR_1g030230 31.212 330 198 9 17 322 32 356 4.88e-37 137
MS.gene001804.t1 MTR_8g089805 30.029 343 202 10 17 329 40 374 1.18e-36 136
MS.gene001804.t1 MTR_1g030268 31.098 328 199 9 17 322 40 362 1.42e-36 136
MS.gene001804.t1 MTR_3g023220 32.754 345 188 12 18 344 34 352 1.49e-36 135
MS.gene001804.t1 MTR_2g015670 31.897 348 199 15 12 342 26 352 2.10e-36 135
MS.gene001804.t1 MTR_3g114120 32.308 325 195 12 8 320 42 353 2.30e-36 135
MS.gene001804.t1 MTR_2g033920 32.075 265 163 6 17 268 35 295 2.94e-36 133
MS.gene001804.t1 MTR_7g087190 29.683 347 211 9 14 332 40 381 4.89e-36 135
MS.gene001804.t1 MTR_5g093090 34.572 269 155 7 17 269 28 291 6.70e-36 132
MS.gene001804.t1 MTR_7g033155 26.146 371 223 7 12 342 33 392 2.05e-35 133
MS.gene001804.t1 MTR_2g017955 30.904 343 208 12 17 345 33 360 3.12e-35 132
MS.gene001804.t1 MTR_4g104240 27.492 331 219 8 18 332 40 365 4.08e-35 132
MS.gene001804.t1 MTR_2g015590 28.611 360 226 12 1 339 15 364 5.46e-35 131
MS.gene001804.t1 MTR_1g060490 29.618 314 195 10 18 322 38 334 8.15e-35 130
MS.gene001804.t1 MTR_1g092750 29.193 322 203 9 16 328 39 344 1.76e-34 129
MS.gene001804.t1 MTR_2g015580 30.857 350 210 14 17 342 47 388 3.10e-34 130
MS.gene001804.t1 MTR_7g033150 27.887 355 214 9 14 338 32 374 3.47e-34 129
MS.gene001804.t1 MTR_8g028160 28.940 349 201 9 18 332 37 372 5.68e-34 129
MS.gene001804.t1 MTR_6g007090 28.824 340 214 8 14 332 36 368 1.35e-33 128
MS.gene001804.t1 MTR_2g015630 30.523 344 205 12 22 342 36 368 3.48e-33 127
MS.gene001804.t1 MTR_7g104220 31.661 319 183 13 18 322 43 340 5.18e-33 125
MS.gene001804.t1 MTR_2g017875 29.769 346 206 10 17 344 34 360 1.69e-32 124
MS.gene001804.t1 MTR_6g007095 29.586 338 204 9 17 330 41 368 2.27e-32 128
MS.gene001804.t1 MTR_6g007095 29.483 329 200 9 21 330 369 684 8.14e-28 114
MS.gene001804.t1 MTR_7g111780 30.091 329 204 11 10 324 30 346 3.65e-32 124
MS.gene001804.t1 MTR_2g079090 29.395 347 206 13 12 336 25 354 4.11e-32 123
MS.gene001804.t1 MTR_5g078210 30.000 280 175 8 3 268 12 284 6.57e-32 122
MS.gene001804.t1 MTR_2g079080 29.107 347 207 13 12 336 25 354 1.05e-31 122
MS.gene001804.t1 MTR_1g030340 28.743 334 202 8 17 322 42 367 1.06e-31 123
MS.gene001804.t1 MTR_6g007100 29.882 338 196 12 17 332 33 351 1.08e-31 122
MS.gene001804.t1 MTR_7g113860 29.834 362 210 15 2 332 16 364 1.59e-31 122
MS.gene001804.t1 MTR_2g017915 30.117 342 189 13 18 345 34 339 2.08e-31 121
MS.gene001804.t1 MTR_1g092760 28.659 328 202 11 13 328 35 342 3.97e-31 120
MS.gene001804.t1 MTR_3g463960 29.379 354 212 15 11 336 40 383 4.03e-31 121
MS.gene001804.t1 MTR_3g463950 29.379 354 212 15 11 336 40 383 4.03e-31 121
MS.gene001804.t1 MTR_3g463970 29.379 354 212 15 11 336 40 383 4.03e-31 121
MS.gene001804.t1 MTR_3g463940 29.379 354 212 15 11 336 40 383 4.03e-31 121
MS.gene001804.t1 MTR_0029s0050 29.107 347 207 13 12 336 25 354 5.52e-31 120
MS.gene001804.t1 MTR_1g092690 29.073 313 193 9 16 318 50 343 8.23e-31 120
MS.gene001804.t1 MTR_7g033165 28.402 338 212 7 17 329 33 365 1.05e-30 120
MS.gene001804.t1 MTR_0029s0100 29.107 347 207 13 12 336 25 354 1.40e-30 119
MS.gene001804.t1 MTR_8g038680 28.863 343 209 10 17 332 28 362 1.89e-29 116
MS.gene001804.t1 MTR_1g082390 29.360 344 210 10 17 334 31 367 2.92e-29 116
MS.gene001804.t1 MTR_3g448360 29.446 343 209 13 12 330 24 357 2.97e-29 116
MS.gene001804.t1 MTR_1g060500 29.102 323 193 13 18 322 41 345 3.84e-29 115
MS.gene001804.t1 MTR_3g463930 29.722 360 210 17 11 336 40 390 3.96e-29 116
MS.gene001804.t1 MTR_3g069780 28.895 353 215 13 12 342 25 363 5.28e-29 115
MS.gene001804.t1 MTR_1g092740 28.875 329 206 10 15 333 36 346 1.03e-28 114
MS.gene001804.t1 MTR_3g438030 28.329 353 217 13 12 342 25 363 3.66e-28 113
MS.gene001804.t1 MTR_2g043980 29.042 334 195 11 17 329 34 346 5.17e-28 112
MS.gene001804.t1 MTR_7g113860 28.818 347 205 14 17 332 35 370 1.48e-27 111
MS.gene001804.t1 MTR_3g069520 29.240 342 208 13 12 330 25 355 2.48e-27 110
MS.gene001804.t1 MTR_1g030268 31.227 269 163 7 17 268 40 303 7.69e-27 108
MS.gene001804.t1 MTR_1g079590 39.227 181 93 6 17 183 31 208 4.57e-26 103
MS.gene001804.t1 MTR_2g015590 28.421 285 187 8 1 268 15 299 8.89e-26 105
MS.gene001804.t1 MTR_1108s0010 27.602 221 142 5 117 333 3 209 4.90e-25 101
MS.gene001804.t1 MTR_5g087690 23.708 329 215 9 17 328 50 359 5.62e-25 104
MS.gene001804.t1 MTR_7g033165 30.888 259 153 7 17 254 33 286 8.68e-24 100
MS.gene001804.t1 MTR_1g060520 26.923 312 170 11 18 318 41 305 6.32e-23 97.8
MS.gene001804.t1 MTR_0127s0040 26.639 244 160 7 109 342 1 235 2.07e-22 94.7
MS.gene001804.t1 MTR_2g017925 30.242 248 146 9 108 345 22 252 3.59e-22 94.7
MS.gene001804.t1 MTR_1g030265 27.148 291 186 9 70 336 53 341 2.54e-21 93.6
MS.gene001804.t1 MTR_8g089805 26.263 297 186 9 63 329 13 306 2.75e-21 93.2
MS.gene001804.t1 MTR_7g111780 28.226 248 158 7 89 323 6 246 5.14e-21 91.3
MS.gene001804.t1 MTR_8g012540 27.759 299 184 8 17 291 28 318 6.36e-21 92.4
MS.gene001804.t1 MTR_5g093090 38.636 176 91 6 17 176 28 202 7.81e-21 89.7
MS.gene001804.t1 MTR_5g074210 31.034 145 93 3 183 326 66 204 3.96e-20 87.8
MS.gene001804.t1 MTR_2g087292 25.075 335 166 10 12 342 28 281 5.82e-20 88.6
MS.gene001804.t1 MTR_2g018015 35.789 190 103 7 17 191 36 221 2.03e-19 87.8
MS.gene001804.t1 MTR_4g036375 36.774 155 84 7 17 163 30 178 2.52e-19 85.1
MS.gene001804.t1 MTR_4g036385 31.250 112 73 1 211 322 16 123 8.45e-17 76.6
MS.gene001804.t1 MTR_6g049230 30.882 136 89 2 173 308 64 194 1.21e-15 74.7
MS.gene001804.t1 MTR_7g113860 26.351 296 180 13 68 332 8 296 1.46e-15 76.6
MS.gene001804.t1 MTR_2g043990 27.881 269 149 8 17 267 96 337 1.52e-15 77.0
MS.gene001804.t1 MTR_2g017895 25.461 271 152 10 90 344 30 266 2.43e-14 72.4
MS.gene001804.t1 MTR_1g079570 28.788 132 89 1 212 343 13 139 7.26e-14 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene001804.t1 AT1G53920 51.775 338 153 5 16 344 47 383 1.45e-120 353
MS.gene001804.t1 AT5G40990 51.852 351 159 5 3 344 23 372 9.69e-117 343
MS.gene001804.t1 AT1G53940 49.271 343 164 5 11 344 33 374 1.65e-109 324
MS.gene001804.t1 AT3G14225 46.512 344 172 6 11 344 31 372 3.37e-103 308
MS.gene001804.t1 AT3G14225 46.264 348 171 7 11 344 31 376 3.47e-102 306
MS.gene001804.t1 AT1G53990 46.439 351 171 6 3 344 21 363 1.16e-98 296
MS.gene001804.t1 AT1G53940 49.627 268 126 4 11 270 33 299 8.82e-79 243
MS.gene001804.t1 AT5G15720 35.882 340 196 8 17 342 30 361 2.10e-59 195
MS.gene001804.t1 AT5G45960 37.975 316 172 10 17 316 47 354 2.52e-57 190
MS.gene001804.t1 AT1G71120 31.657 338 206 9 17 342 31 355 2.71e-56 187
MS.gene001804.t1 AT5G45950 33.438 317 187 10 17 322 40 343 8.87e-53 178
MS.gene001804.t1 AT3G04290 33.628 339 201 8 17 341 29 357 2.68e-52 177
MS.gene001804.t1 AT1G54030 31.420 331 200 9 18 343 53 361 4.30e-52 178
MS.gene001804.t1 AT5G41890 33.621 348 199 12 19 342 33 372 1.09e-51 176
MS.gene001804.t1 AT2G04570 33.731 335 202 9 2 324 13 339 1.86e-51 174
MS.gene001804.t1 AT4G26790 35.404 322 182 10 17 323 29 339 4.47e-51 173
MS.gene001804.t1 AT4G26790 35.404 322 182 10 17 323 29 339 4.47e-51 173
MS.gene001804.t1 AT5G33370 32.059 340 209 7 17 343 30 360 2.96e-50 172
MS.gene001804.t1 AT5G18430 33.623 345 201 10 14 341 25 358 3.47e-50 171
MS.gene001804.t1 AT4G28780 33.138 341 204 10 17 343 31 361 1.69e-49 170
MS.gene001804.t1 AT1G06990 32.308 325 189 10 17 323 37 348 9.69e-49 167
MS.gene001804.t1 AT2G40250 32.407 324 197 9 17 325 36 352 1.47e-48 167
MS.gene001804.t1 AT3G16370 32.344 337 197 12 17 335 30 353 1.68e-48 167
MS.gene001804.t1 AT1G71691 31.845 336 209 6 17 342 55 380 6.67e-48 166
MS.gene001804.t1 AT3G50400 31.700 347 209 12 16 342 33 371 1.69e-46 162
MS.gene001804.t1 AT5G03820 31.579 323 197 11 17 324 33 346 1.92e-46 161
MS.gene001804.t1 AT1G20120 32.915 319 196 9 17 324 78 389 3.45e-46 162
MS.gene001804.t1 AT4G18970 31.454 337 210 8 19 342 30 358 4.63e-46 160
MS.gene001804.t1 AT5G03820 31.579 323 197 11 17 324 61 374 6.36e-46 160
MS.gene001804.t1 AT1G20132 30.435 322 206 9 17 327 61 375 1.17e-45 160
MS.gene001804.t1 AT4G10950 28.947 342 222 9 17 345 71 404 1.42e-45 160
MS.gene001804.t1 AT2G23540 30.725 345 212 10 17 342 48 384 1.52e-45 160
MS.gene001804.t1 AT4G18970 31.454 337 210 8 19 342 30 358 1.66e-45 160
MS.gene001804.t1 AT1G75890 31.447 318 201 9 17 323 47 358 2.06e-45 159
MS.gene001804.t1 AT2G42990 31.307 329 206 9 17 333 28 348 2.78e-45 158
MS.gene001804.t1 AT3G14820 33.542 319 190 11 17 324 32 339 3.19e-45 158
MS.gene001804.t1 AT1G75890 31.447 318 201 9 17 323 76 387 5.10e-45 159
MS.gene001804.t1 AT5G45670 31.157 337 211 8 19 342 31 359 8.05e-45 157
MS.gene001804.t1 AT5G15720 37.218 266 150 7 17 268 30 292 1.22e-44 155
MS.gene001804.t1 AT5G03810 28.840 319 210 6 17 324 30 342 4.55e-44 155
MS.gene001804.t1 AT1G59406 31.962 316 196 10 17 322 30 336 7.18e-44 154
MS.gene001804.t1 AT1G59030 31.962 316 196 10 17 322 30 336 7.18e-44 154
MS.gene001804.t1 AT1G58725 31.962 316 196 10 17 322 30 336 7.18e-44 154
MS.gene001804.t1 AT2G19010 30.362 359 210 12 2 345 15 348 8.31e-44 154
MS.gene001804.t1 AT1G29660 31.193 327 202 9 19 332 34 350 1.03e-43 154
MS.gene001804.t1 AT1G75890 30.211 331 201 9 17 323 47 371 1.65e-43 154
MS.gene001804.t1 AT2G19010 30.362 359 210 12 2 345 45 378 2.30e-43 154
MS.gene001804.t1 AT3G14220 31.940 335 201 13 18 342 33 350 3.19e-43 153
MS.gene001804.t1 AT1G29670 31.098 328 202 9 18 332 33 349 3.54e-43 153
MS.gene001804.t1 AT5G37690 29.412 323 202 9 19 327 29 339 4.16e-43 152
MS.gene001804.t1 AT5G08460 30.702 342 213 8 17 342 49 382 4.85e-43 153
MS.gene001804.t1 AT5G22810 31.077 325 197 12 17 324 34 348 4.99e-43 152
MS.gene001804.t1 AT1G20130 31.118 331 197 11 17 326 184 504 5.38e-43 155
MS.gene001804.t1 AT4G10950 28.655 342 219 10 17 345 71 400 5.69e-43 153
MS.gene001804.t1 AT3G53100 30.000 320 202 9 17 323 29 339 7.75e-43 152
MS.gene001804.t1 AT1G20130 31.118 331 197 11 17 326 204 524 1.11e-42 155
MS.gene001804.t1 AT5G42170 30.341 323 206 10 8 322 45 356 1.20e-42 152
MS.gene001804.t1 AT1G29670 31.875 320 194 9 18 324 101 409 1.49e-42 153
MS.gene001804.t1 AT1G58430 30.794 315 196 7 17 317 35 341 1.50e-42 151
MS.gene001804.t1 AT1G58520 31.975 319 185 10 17 322 30 329 2.12e-42 150
MS.gene001804.t1 AT1G58525 31.975 319 185 10 17 322 30 329 2.12e-42 150
MS.gene001804.t1 AT2G30220 30.769 325 201 8 17 326 33 348 3.47e-42 150
MS.gene001804.t1 AT2G24560 30.183 328 199 10 17 326 34 349 4.57e-41 147
MS.gene001804.t1 AT1G75900 28.783 337 221 9 2 326 26 355 1.34e-40 146
MS.gene001804.t1 AT5G15720 31.597 288 178 6 69 342 48 330 1.66e-40 145
MS.gene001804.t1 AT1G75880 30.503 318 202 8 17 322 52 362 1.81e-40 146
MS.gene001804.t1 AT2G30310 29.814 322 208 7 17 326 34 349 1.87e-40 145
MS.gene001804.t1 AT1G28600 30.769 351 193 14 17 337 31 361 3.65e-40 145
MS.gene001804.t1 AT1G75880 30.284 317 203 8 17 322 52 361 5.52e-40 145
MS.gene001804.t1 AT2G27360 32.194 351 205 14 17 342 33 375 6.94e-40 145
MS.gene001804.t1 AT1G20135 30.312 320 187 10 17 322 29 326 9.80e-40 143
MS.gene001804.t1 AT5G63170 32.177 317 177 12 17 318 28 321 9.83e-40 143
MS.gene001804.t1 AT1G74460 28.704 324 209 7 16 326 22 336 1.08e-39 144
MS.gene001804.t1 AT2G19060 30.861 337 199 12 19 342 32 347 1.29e-39 143
MS.gene001804.t1 AT3G14210 30.029 343 205 13 15 342 34 356 2.47e-39 144
MS.gene001804.t1 AT5G55050 30.321 343 212 11 18 342 40 373 4.61e-39 142
MS.gene001804.t1 AT1G54000 30.383 339 205 13 16 342 35 354 6.42e-39 142
MS.gene001804.t1 AT1G71250 27.515 338 225 6 17 342 41 370 1.33e-38 141
MS.gene001804.t1 AT4G01130 29.825 342 209 8 17 332 34 370 1.88e-38 141
MS.gene001804.t1 AT5G37690 28.261 322 199 9 19 327 29 331 2.13e-38 140
MS.gene001804.t1 AT2G19050 30.088 339 197 13 19 342 33 346 2.29e-38 140
MS.gene001804.t1 AT1G54010 29.290 338 210 11 16 342 35 354 2.47e-38 140
MS.gene001804.t1 AT1G54020 28.060 335 215 11 16 343 32 347 5.48e-38 139
MS.gene001804.t1 AT2G31540 29.321 324 207 7 17 326 35 350 1.23e-37 138
MS.gene001804.t1 AT1G28580 29.598 348 208 12 13 333 33 370 2.43e-37 138
MS.gene001804.t1 AT1G28650 29.970 337 213 9 13 329 33 366 2.78e-37 138
MS.gene001804.t1 AT1G33811 29.462 353 222 11 9 342 23 367 7.80e-37 136
MS.gene001804.t1 AT1G75920 31.790 324 185 11 17 324 29 332 1.65e-36 135
MS.gene001804.t1 AT1G28590 29.972 357 210 14 17 345 36 380 2.67e-36 135
MS.gene001804.t1 AT1G28570 28.814 354 218 13 17 345 34 378 3.18e-36 135
MS.gene001804.t1 AT4G30140 28.529 333 208 8 19 342 35 346 4.85e-36 134
MS.gene001804.t1 AT1G28640 30.117 342 198 12 17 329 35 364 5.38e-36 134
MS.gene001804.t1 AT1G75910 29.814 322 195 10 17 324 28 332 9.54e-36 133
MS.gene001804.t1 AT3G48460 27.988 343 222 11 5 329 28 363 1.11e-35 133
MS.gene001804.t1 AT1G28610 29.661 354 203 13 17 342 31 366 1.66e-35 133
MS.gene001804.t1 AT1G31550 30.028 353 208 13 17 342 36 376 2.69e-35 132
MS.gene001804.t1 AT3G43550 31.868 273 163 9 8 268 25 286 3.19e-35 130
MS.gene001804.t1 AT2G03980 30.154 325 198 13 17 328 43 351 9.85e-35 130
MS.gene001804.t1 AT2G03980 30.154 325 198 13 17 328 43 351 9.85e-35 130
MS.gene001804.t1 AT2G03980 30.154 325 198 13 17 328 43 351 9.85e-35 130
MS.gene001804.t1 AT2G03980 30.154 325 198 13 17 328 43 351 9.85e-35 130
MS.gene001804.t1 AT1G54030 33.058 242 142 7 18 254 53 279 1.06e-34 129
MS.gene001804.t1 AT1G23500 32.110 327 190 11 17 331 35 341 1.17e-34 130
MS.gene001804.t1 AT5G14450 28.655 342 206 9 17 329 41 373 1.26e-34 131
MS.gene001804.t1 AT1G73610 30.530 321 186 11 17 323 35 332 8.41e-34 127
MS.gene001804.t1 AT3G43570 27.532 316 181 8 17 322 30 307 1.50e-33 126
MS.gene001804.t1 AT5G03610 30.031 323 198 10 12 322 38 344 1.88e-33 127
MS.gene001804.t1 AT3G26430 29.446 343 204 8 17 329 31 365 2.03e-33 127
MS.gene001804.t1 AT1G71691 32.443 262 162 5 17 268 55 311 3.58e-33 125
MS.gene001804.t1 AT1G75920 30.357 336 189 11 17 324 24 342 4.26e-33 126
MS.gene001804.t1 AT1G54790 30.028 363 210 14 1 332 18 367 7.58e-33 126
MS.gene001804.t1 AT1G31550 29.545 352 208 14 17 342 36 373 1.33e-32 125
MS.gene001804.t1 AT1G28660 28.824 340 213 9 13 329 31 364 2.58e-32 124
MS.gene001804.t1 AT3G05180 28.297 364 221 12 2 335 21 374 6.30e-32 123
MS.gene001804.t1 AT1G75930 30.218 321 194 11 17 324 29 332 1.74e-31 121
MS.gene001804.t1 AT1G28670 29.341 334 212 9 17 329 35 365 1.80e-31 122
MS.gene001804.t1 AT2G19050 32.258 248 145 8 19 254 33 269 1.94e-31 120
MS.gene001804.t1 AT1G71691 26.667 285 191 5 68 342 3 279 2.00e-31 120
MS.gene001804.t1 AT5G33370 29.818 275 175 7 8 268 20 290 2.04e-31 121
MS.gene001804.t1 AT5G45910 32.277 347 195 12 14 329 27 364 2.32e-31 122
MS.gene001804.t1 AT1G28660 29.118 340 211 10 13 329 31 363 2.43e-31 122
MS.gene001804.t1 AT1G67830 29.129 333 204 10 17 322 30 357 3.34e-31 121
MS.gene001804.t1 AT1G56670 28.834 326 208 10 18 328 41 357 3.90e-30 118
MS.gene001804.t1 AT3G09930 29.217 332 200 11 18 333 40 352 5.65e-30 117
MS.gene001804.t1 AT3G09930 29.217 332 200 11 18 333 40 352 5.65e-30 117
MS.gene001804.t1 AT1G09390 28.339 307 190 10 46 332 62 358 8.71e-30 117
MS.gene001804.t1 AT1G75920 29.934 304 179 10 37 324 19 304 7.97e-29 114
MS.gene001804.t1 AT1G75920 28.616 318 172 10 17 324 29 301 1.76e-28 112
MS.gene001804.t1 AT2G24560 28.938 273 169 9 17 271 34 299 1.44e-27 110
MS.gene001804.t1 AT5G03600 29.907 321 193 10 12 322 9 307 2.22e-27 110
MS.gene001804.t1 AT5G03600 29.907 321 193 10 12 322 44 342 3.49e-27 110
MS.gene001804.t1 AT3G62280 30.272 294 179 9 46 322 61 345 1.04e-26 108
MS.gene001804.t1 AT1G54790 28.986 345 200 14 24 332 31 366 1.14e-26 109
MS.gene001804.t1 AT4G01130 29.259 270 168 5 17 268 34 298 1.69e-26 107
MS.gene001804.t1 AT4G16230 32.857 210 123 8 9 203 21 227 4.39e-25 102
MS.gene001804.t1 AT2G04020 35.714 210 123 7 17 216 43 250 7.39e-25 103
MS.gene001804.t1 AT2G04020 36.181 199 117 6 17 207 43 239 8.25e-25 101
MS.gene001804.t1 AT3G27950 27.434 339 219 8 17 336 32 362 1.52e-24 103
MS.gene001804.t1 AT4G01130 26.761 284 182 7 75 332 1 284 3.56e-24 100
MS.gene001804.t1 AT1G53970 60.526 76 30 0 11 86 14 89 4.09e-24 95.1
MS.gene001804.t1 AT1G53970 60.526 76 30 0 11 86 14 89 4.09e-24 95.1
MS.gene001804.t1 AT1G28600 34.783 184 90 7 17 180 31 204 3.67e-22 93.6
MS.gene001804.t1 AT2G31550 25.592 211 141 3 119 322 4 205 4.62e-22 93.2
MS.gene001804.t1 AT2G36325 28.750 320 192 15 18 322 48 346 5.27e-22 95.9
MS.gene001804.t1 AT1G54790 27.493 371 198 16 24 332 31 392 1.05e-21 95.5
MS.gene001804.t1 AT1G56670 27.899 276 181 9 4 268 29 297 2.65e-21 92.8
MS.gene001804.t1 AT1G54020 23.897 272 184 8 78 343 7 261 1.40e-20 90.5
MS.gene001804.t1 AT1G54020 23.897 272 184 8 78 343 7 261 1.40e-20 90.5
MS.gene001804.t1 AT1G54020 23.897 272 184 8 78 343 7 261 1.40e-20 90.5
MS.gene001804.t1 AT3G62280 33.036 224 132 7 46 256 61 279 3.18e-20 89.7
MS.gene001804.t1 AT1G54020 25.359 209 144 5 141 343 10 212 4.47e-20 88.2
MS.gene001804.t1 AT1G28580 26.117 291 181 10 68 333 8 289 5.02e-20 89.4
MS.gene001804.t1 AT3G14210 24.896 241 158 8 112 342 1 228 1.48e-16 79.0
MS.gene001804.t1 AT4G16233 31.496 127 81 2 217 342 6 127 1.80e-16 75.5
MS.gene001804.t1 AT1G28610 33.696 184 92 8 17 180 31 204 1.09e-15 76.3
MS.gene001804.t1 AT1G28570 26.540 211 133 8 150 345 12 215 1.47e-15 75.5
MS.gene001804.t1 AT5G03980 26.190 252 161 10 93 326 66 310 4.21e-15 75.5
MS.gene001804.t1 AT1G28570 26.540 211 133 8 150 345 103 306 5.61e-15 75.1
MS.gene001804.t1 AT4G16220 46.465 99 46 5 9 103 21 116 2.82e-12 66.2

Find 68 sgRNAs with CRISPR-Local

Find 134 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTTCCACTCCACATAAAT+TGG 0.117994 8.3:+63858544 None:intergenic
GAGATTGGAGGGAGGAAATT+TGG 0.128940 8.3:-63859539 MS.gene001804:CDS
ATAAGGAACCCTTCCAAATT+TGG 0.194977 8.3:-63859311 MS.gene001804:intron
AATAGATATGGTTGAATTAA+TGG 0.240239 8.3:+63860642 None:intergenic
ATGTCGTAACCTACCAAATT+TGG 0.250255 8.3:+63859298 None:intergenic
CATGTTGCGTTGTTTGTATT+TGG 0.276431 8.3:-63861069 MS.gene001804:CDS
CAATACTACTGCTGATTATC+TGG 0.284780 8.3:-63861010 MS.gene001804:CDS
AGATTGGAGGGAGGAAATTT+GGG 0.288893 8.3:-63859538 MS.gene001804:CDS
ACCATCAAGGCATTTGTAAA+TGG 0.295353 8.3:-63859482 MS.gene001804:CDS
TCCATTTACAAATGCCTTGA+TGG 0.302148 8.3:+63859481 None:intergenic
AAAGTATTGAGGCAGAAATT+AGG 0.330525 8.3:-63860060 MS.gene001804:CDS
ATTCAACCATATCTATTTCC+TGG 0.336634 8.3:-63860636 MS.gene001804:CDS
AACAACGCAACATGTTCTTT+TGG 0.354884 8.3:+63861078 None:intergenic
ATCTATTTATTGAAGTCATA+AGG 0.388340 8.3:-63859328 MS.gene001804:CDS
GTTGATTAAGTAAACAGCTT+TGG 0.391709 8.3:+63860011 None:intergenic
TTTCAGGGAATACATGAGAT+TGG 0.392735 8.3:-63859554 MS.gene001804:intron
TTGAAGAAGGTTTCACCATA+TGG 0.403375 8.3:+63860976 None:intergenic
ATATTCTTACCTATGAAATC+TGG 0.406113 8.3:+63860916 None:intergenic
CTGTGGTAGTGGACCTTACA+AGG 0.416741 8.3:-63858685 MS.gene001804:CDS
ATTTCCACTCCACATAAATT+GGG 0.417782 8.3:+63858545 None:intergenic
CGTGTCATTCCAGATTTCAT+AGG 0.463040 8.3:-63860925 MS.gene001804:intron
GGATTATTTCCCAATTTATG+TGG 0.464274 8.3:-63858554 MS.gene001804:CDS
TTTACAAATGCCTTGATGGT+TGG 0.467592 8.3:+63859485 None:intergenic
GCCATTCATCCTACTGAAAG+TGG 0.478067 8.3:-63858582 MS.gene001804:CDS
ACCTTCTTCAAGTATCCATC+TGG 0.479315 8.3:-63860964 MS.gene001804:CDS
GCTGTTTACTTAATCAACAT+TGG 0.479448 8.3:-63860006 MS.gene001804:CDS
TGAGAACCAGGAAATAGATA+TGG 0.483185 8.3:+63860630 None:intergenic
GGAGTAGCATGCTGTGGTAG+TGG 0.486878 8.3:-63858696 MS.gene001804:CDS
CAACTGTAATATCCCTTGTA+AGG 0.490108 8.3:+63858672 None:intergenic
TGATGAAAAGGTTTGAAAGA+AGG 0.492946 8.3:-63858720 MS.gene001804:intron
CTGGCAAATTACCCACCATA+TGG 0.493318 8.3:-63860991 MS.gene001804:CDS
ATCCTACTGAAAGTGGTAGT+AGG 0.503174 8.3:-63858575 MS.gene001804:CDS
GGAGATTCATTATTTGATGT+CGG 0.507507 8.3:-63861048 MS.gene001804:CDS
GGTTCTCAACTATATATCAA+TGG 0.507572 8.3:-63860615 MS.gene001804:CDS
TGAAGAAACCACAACTCTGC+TGG 0.512505 8.3:-63860034 MS.gene001804:CDS
ATTTCCCAATTTATGTGGAG+TGG 0.520045 8.3:-63858549 MS.gene001804:CDS
ACCACTTTCAGTAGGATGAA+TGG 0.524662 8.3:+63858581 None:intergenic
AGCTTTGGCCAGCAGAGTTG+TGG 0.539024 8.3:+63860026 None:intergenic
ATTCTTAACACACCATCACT+TGG 0.539789 8.3:-63859515 MS.gene001804:CDS
TACAAGGGATATTACAGTTG+TGG 0.540378 8.3:-63858669 MS.gene001804:CDS
CAGGGAATACATGAGATTGG+AGG 0.540491 8.3:-63859551 MS.gene001804:CDS
ACCAGATGGATACTTGAAGA+AGG 0.545031 8.3:+63860963 None:intergenic
GTTTACTTAATCAACATTGG+AGG 0.549518 8.3:-63860003 MS.gene001804:CDS
TGAAAAGGTTTGAAAGAAGG+AGG 0.555812 8.3:-63858717 MS.gene001804:intron
CGTAACCTACCAAATTTGGA+AGG 0.560332 8.3:+63859302 None:intergenic
AGGGAATACATGAGATTGGA+GGG 0.573956 8.3:-63859550 MS.gene001804:CDS
AAACATATGTTACCAAGTGT+TGG 0.574366 8.3:+63861102 None:intergenic
GGAATGCTAATTCCAACACT+TGG 0.575060 8.3:-63861114 MS.gene001804:CDS
AAGAAGGTTTCACCATATGG+TGG 0.576872 8.3:+63860979 None:intergenic
AGTAGAAACTCATCAAGGAC+TGG 0.581951 8.3:-63860559 MS.gene001804:intron
TCAAAGAACAAATATTCAGA+AGG 0.585115 8.3:+63858606 None:intergenic
TTGATATATAGTTGAGAACC+AGG 0.593545 8.3:+63860618 None:intergenic
AGTGGAAATAAGAGTATCAC+CGG 0.594030 8.3:-63858531 MS.gene001804:CDS
TAGTTTAGTGTTGTGCACTT+TGG 0.595776 8.3:+63859418 None:intergenic
AAATACGTATCAATGGTTGT+TGG 0.595900 8.3:-63859937 MS.gene001804:CDS
CCATCAGAAAATCTACCAGA+TGG 0.603978 8.3:+63860949 None:intergenic
AGAAGGTTTCACCATATGGT+GGG 0.608192 8.3:+63860980 None:intergenic
AAGGGATATTACAGTTGTGG+AGG 0.618906 8.3:-63858666 MS.gene001804:CDS
AGAATGTCAAGAAAGTATTG+AGG 0.633947 8.3:-63860071 MS.gene001804:CDS
GAAGGAGGAGTAGCATGCTG+TGG 0.634403 8.3:-63858702 MS.gene001804:CDS
AATTTAACGAAACAGATCAA+AGG 0.635768 8.3:-63859380 MS.gene001804:CDS
ATCCTACTACCACTTTCAGT+AGG 0.638183 8.3:+63858573 None:intergenic
GTAACCTACCAAATTTGGAA+GGG 0.642469 8.3:+63859303 None:intergenic
GTAAGAGATTATGACTTGTG+TGG 0.643556 8.3:-63858633 MS.gene001804:CDS
GCTTTAGTAGAAACTCATCA+AGG 0.663302 8.3:-63860564 MS.gene001804:CDS
GTTGGAAAACAACCAAGTGA+TGG 0.678111 8.3:+63859503 None:intergenic
TGTGGTAGTGGACCTTACAA+GGG 0.691944 8.3:-63858684 MS.gene001804:CDS
GAATACATGAGATTGGAGGG+AGG 0.702913 8.3:-63859547 MS.gene001804:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCAAAAAAAAAAAAATTGAG+AGG + chr8.3:63859305-63859324 None:intergenic 15.0%
!! TTACGATAAAAGTTAAAATT+AGG + chr8.3:63858879-63858898 None:intergenic 15.0%
!!! ACTGTTTTGATAAATTATTA+TGG + chr8.3:63858783-63858802 None:intergenic 15.0%
!!! GATATTAGTTTTCAATATAA+TGG - chr8.3:63860785-63860804 MS.gene001804:intron 15.0%
!!! TTAATTTTTTAGCTTAATTG+CGG - chr8.3:63859117-63859136 MS.gene001804:intron 15.0%
!!! TTATCTAATTCTAAAATTTG+TGG - chr8.3:63860855-63860874 MS.gene001804:intron 15.0%
!! AATAGATATGGTTGAATTAA+TGG + chr8.3:63858969-63858988 None:intergenic 20.0%
!! AATTTCACAATACAAATTTG+CGG + chr8.3:63860692-63860711 None:intergenic 20.0%
!! ATATTCGACAAAATTATTGA+AGG + chr8.3:63860382-63860401 None:intergenic 20.0%
!! ATCTATTTATTGAAGTCATA+AGG - chr8.3:63860280-63860299 MS.gene001804:intron 20.0%
!! ATTAAAAATAAGTAGATACG+AGG + chr8.3:63859868-63859887 None:intergenic 20.0%
!! ATTAGAATAGTAGAAGATTT+AGG + chr8.3:63860002-63860021 None:intergenic 20.0%
!! GAAAATATATAAACACCATA+TGG + chr8.3:63859481-63859500 None:intergenic 20.0%
!! TACATAAACACTTGTATAAT+AGG - chr8.3:63859940-63859959 MS.gene001804:CDS 20.0%
!! TATAGTATTTCAATACAATC+TGG + chr8.3:63859274-63859293 None:intergenic 20.0%
!! TATTCCCTGAAATTAAATAT+TGG + chr8.3:63860046-63860065 None:intergenic 20.0%
!! TGTTATGGTGTAAAAAAATA+CGG + chr8.3:63860625-63860644 None:intergenic 20.0%
!! TTAGAATATAACCTATTTGA+TGG + chr8.3:63860721-63860740 None:intergenic 20.0%
!! TTGACATGTCAATAAAAAAT+TGG - chr8.3:63859321-63859340 MS.gene001804:CDS 20.0%
!! TTGATACATTAAATGTGTTA+TGG + chr8.3:63860640-63860659 None:intergenic 20.0%
!!! AAATGTTACTTCATCATTTT+TGG + chr8.3:63859203-63859222 None:intergenic 20.0%
!!! ATTTTTGGTTTTAGAAATCT+TGG + chr8.3:63859188-63859207 None:intergenic 20.0%
!!! CATTCCAATATTTAATTTCA+GGG - chr8.3:63860039-63860058 MS.gene001804:CDS 20.0%
!!! TATGGTGTTTATATATTTTC+AGG - chr8.3:63859481-63859500 MS.gene001804:CDS 20.0%
!!! TCATTCCAATATTTAATTTC+AGG - chr8.3:63860038-63860057 MS.gene001804:CDS 20.0%
!!! TGATGAAGTAACATTTTTTT+TGG - chr8.3:63859207-63859226 MS.gene001804:intron 20.0%
!!! TTTACTTGTCTAGATTTTTT+TGG - chr8.3:63859155-63859174 MS.gene001804:intron 20.0%
!!! TTTGAAGTCATTGATTTAAT+TGG + chr8.3:63860471-63860490 None:intergenic 20.0%
!!! TTTGGATTGACTTATTTAAA+CGG - chr8.3:63859784-63859803 MS.gene001804:intron 20.0%
!!! TTTTTTTTTCATCACTCAAA+CGG + chr8.3:63858736-63858755 None:intergenic 20.0%
! AATGTATCAACCTAAACATT+GGG - chr8.3:63860650-63860669 MS.gene001804:CDS 25.0%
! AATTTAACGAAACAGATCAA+AGG - chr8.3:63860228-63860247 MS.gene001804:intron 25.0%
! ACTACGATATTAGAAAATAC+AGG + chr8.3:63859740-63859759 None:intergenic 25.0%
! ATATTCTTACCTATGAAATC+TGG + chr8.3:63858695-63858714 None:intergenic 25.0%
! ATCATGATCAGATTGTTAAT+TGG + chr8.3:63858916-63858935 None:intergenic 25.0%
! ATTTCACAATACAAATTTGC+GGG + chr8.3:63860691-63860710 None:intergenic 25.0%
! GGTTATGATTAAAACATGTT+TGG - chr8.3:63859766-63859785 MS.gene001804:intron 25.0%
! TAATGTATCAACCTAAACAT+TGG - chr8.3:63860649-63860668 MS.gene001804:CDS 25.0%
! TCAAAGAACAAATATTCAGA+AGG + chr8.3:63861005-63861024 None:intergenic 25.0%
! TCATGAAAAATACGTATCAA+TGG - chr8.3:63859664-63859683 MS.gene001804:intron 25.0%
! TGTCAAATAACTAAACAACT+CGG + chr8.3:63859374-63859393 None:intergenic 25.0%
!! AAATTGACTTACCATCAAAT+AGG - chr8.3:63860707-63860726 MS.gene001804:intron 25.0%
!! ACCAATTTTTGCTTACATTT+TGG + chr8.3:63858829-63858848 None:intergenic 25.0%
!! CCAATTTTTGCTTACATTTT+GGG + chr8.3:63858828-63858847 None:intergenic 25.0%
!! TTCTAATATCGTAGTTCTTT+TGG - chr8.3:63859745-63859764 MS.gene001804:intron 25.0%
!!! TGAAGTAACATTTTTTTTGG+CGG - chr8.3:63859210-63859229 MS.gene001804:intron 25.0%
AAACATATGTTACCAAGTGT+TGG + chr8.3:63858509-63858528 None:intergenic 30.0%
AAATACGTATCAATGGTTGT+TGG - chr8.3:63859671-63859690 MS.gene001804:intron 30.0%
ATAAGAGAGATTTGACCATA+TGG - chr8.3:63859463-63859482 MS.gene001804:CDS 30.0%
ATTCAACCATATCTATTTCC+TGG - chr8.3:63858972-63858991 MS.gene001804:intron 30.0%
ATTTCCACTCCACATAAATT+GGG + chr8.3:63861066-63861085 None:intergenic 30.0%
CCCAAAATGTAAGCAAAAAT+TGG - chr8.3:63858825-63858844 MS.gene001804:intron 30.0%
GACTTATTTAAACGGTTGTT+AGG - chr8.3:63859792-63859811 MS.gene001804:intron 30.0%
GCTGTTTACTTAATCAACAT+TGG - chr8.3:63859602-63859621 MS.gene001804:intron 30.0%
GGAGATTCATTATTTGATGT+CGG - chr8.3:63858560-63858579 MS.gene001804:CDS 30.0%
GGATTATTTCCCAATTTATG+TGG - chr8.3:63861054-63861073 MS.gene001804:CDS 30.0%
GGTTCTCAACTATATATCAA+TGG - chr8.3:63858993-63859012 MS.gene001804:intron 30.0%
GTTGATTAAGTAAACAGCTT+TGG + chr8.3:63859600-63859619 None:intergenic 30.0%
GTTTACTTAATCAACATTGG+AGG - chr8.3:63859605-63859624 MS.gene001804:intron 30.0%
TATTTCCACTCCACATAAAT+TGG + chr8.3:63861067-63861086 None:intergenic 30.0%
TGATGAAAAGGTTTGAAAGA+AGG - chr8.3:63860888-63860907 MS.gene001804:intron 30.0%
TTGATATATAGTTGAGAACC+AGG + chr8.3:63858993-63859012 None:intergenic 30.0%
! AACTAAACAACTCGGATTTT+TGG + chr8.3:63859366-63859385 None:intergenic 30.0%
!! AAAGTATTGAGGCAGAAATT+AGG - chr8.3:63859548-63859567 MS.gene001804:CDS 30.0%
!! AGAATGTCAAGAAAGTATTG+AGG - chr8.3:63859537-63859556 MS.gene001804:CDS 30.0%
!! GGCTTAATTTGATGATGAAA+AGG - chr8.3:63860876-63860895 MS.gene001804:intron 30.0%
!! TTTTTGCTTACATTTTGGGA+CGG + chr8.3:63858824-63858843 None:intergenic 30.0%
!!! AACAGAGTTTTGAGATTGTA+AGG + chr8.3:63861104-63861123 None:intergenic 30.0%
!!! ACAGAGTTTTGAGATTGTAA+GGG + chr8.3:63861103-63861122 None:intergenic 30.0%
ATAAGGAACCCTTCCAAATT+TGG - chr8.3:63860297-63860316 MS.gene001804:intron 35.0%
ATGTCGTAACCTACCAAATT+TGG + chr8.3:63860313-63860332 None:intergenic 35.0%
ATTCTTAACACACCATCACT+TGG - chr8.3:63860093-63860112 MS.gene001804:CDS 35.0%
ATTTCCCAATTTATGTGGAG+TGG - chr8.3:63861059-63861078 MS.gene001804:CDS 35.0%
CAACTGTAATATCCCTTGTA+AGG + chr8.3:63860939-63860958 None:intergenic 35.0%
CATGTTGCGTTGTTTGTATT+TGG - chr8.3:63858539-63858558 MS.gene001804:CDS 35.0%
CTCAAAACTAGCTGATAAAG+AGG + chr8.3:63859236-63859255 None:intergenic 35.0%
GAAGGAATAACCCAATGTTT+AGG + chr8.3:63860663-63860682 None:intergenic 35.0%
GCTTTAGTAGAAACTCATCA+AGG - chr8.3:63859044-63859063 MS.gene001804:intron 35.0%
GTAACCTACCAAATTTGGAA+GGG + chr8.3:63860308-63860327 None:intergenic 35.0%
TACAAGGGATATTACAGTTG+TGG - chr8.3:63860939-63860958 MS.gene001804:CDS 35.0%
TAGTTTAGTGTTGTGCACTT+TGG + chr8.3:63860193-63860212 None:intergenic 35.0%
TCCATTTACAAATGCCTTGA+TGG + chr8.3:63860130-63860149 None:intergenic 35.0%
TCTAGACAAGTAAAAACACG+AGG + chr8.3:63859149-63859168 None:intergenic 35.0%
TGAAAAGGTTTGAAAGAAGG+AGG - chr8.3:63860891-63860910 MS.gene001804:intron 35.0%
TGAGAACCAGGAAATAGATA+TGG + chr8.3:63858981-63859000 None:intergenic 35.0%
TTGAAGAAGGTTTCACCATA+TGG + chr8.3:63858635-63858654 None:intergenic 35.0%
TTTCAGGGAATACATGAGAT+TGG - chr8.3:63860054-63860073 MS.gene001804:CDS 35.0%
! AACAACGCAACATGTTCTTT+TGG + chr8.3:63858533-63858552 None:intergenic 35.0%
! ACCATCAAGGCATTTGTAAA+TGG - chr8.3:63860126-63860145 MS.gene001804:intron 35.0%
! CAATACTACTGCTGATTATC+TGG - chr8.3:63858598-63858617 MS.gene001804:CDS 35.0%
! GTAAGAGATTATGACTTGTG+TGG - chr8.3:63860975-63860994 MS.gene001804:CDS 35.0%
! TTTACAAATGCCTTGATGGT+TGG + chr8.3:63860126-63860145 None:intergenic 35.0%
!! AGTGGAAATAAGAGTATCAC+CGG - chr8.3:63861077-63861096 MS.gene001804:CDS 35.0%
!!! CTCTTTATCAGCTAGTTTTG+AGG - chr8.3:63859234-63859253 MS.gene001804:intron 35.0%
AAGAAGGTTTCACCATATGG+TGG + chr8.3:63858632-63858651 None:intergenic 40.0%
AAGGGATATTACAGTTGTGG+AGG - chr8.3:63860942-63860961 MS.gene001804:CDS 40.0%
ACCACTTTCAGTAGGATGAA+TGG + chr8.3:63861030-63861049 None:intergenic 40.0%
ACCAGATGGATACTTGAAGA+AGG + chr8.3:63858648-63858667 None:intergenic 40.0%
ACCTTCTTCAAGTATCCATC+TGG - chr8.3:63858644-63858663 MS.gene001804:CDS 40.0%
AGAAGGTTTCACCATATGGT+GGG + chr8.3:63858631-63858650 None:intergenic 40.0%
AGATTGGAGGGAGGAAATTT+GGG - chr8.3:63860070-63860089 MS.gene001804:CDS 40.0%
AGGGAATACATGAGATTGGA+GGG - chr8.3:63860058-63860077 MS.gene001804:CDS 40.0%
AGTAGAAACTCATCAAGGAC+TGG - chr8.3:63859049-63859068 MS.gene001804:intron 40.0%
ATCCTACTACCACTTTCAGT+AGG + chr8.3:63861038-63861057 None:intergenic 40.0%
ATCCTACTGAAAGTGGTAGT+AGG - chr8.3:63861033-63861052 MS.gene001804:CDS 40.0%
CAATACAAATTTGCGGGTCA+CGG + chr8.3:63860685-63860704 None:intergenic 40.0%
CCATCAGAAAATCTACCAGA+TGG + chr8.3:63858662-63858681 None:intergenic 40.0%
CGTAACCTACCAAATTTGGA+AGG + chr8.3:63860309-63860328 None:intergenic 40.0%
GTTGGAAAACAACCAAGTGA+TGG + chr8.3:63860108-63860127 None:intergenic 40.0%
TACAATCTGGTATTGCAACC+AGG + chr8.3:63859261-63859280 None:intergenic 40.0%
! CCATCTGGTAGATTTTCTGA+TGG - chr8.3:63858659-63858678 MS.gene001804:CDS 40.0%
! CGTGTCATTCCAGATTTCAT+AGG - chr8.3:63858683-63858702 MS.gene001804:CDS 40.0%
!! TGGTTGTTTTCCAACCATCA+AGG - chr8.3:63860113-63860132 MS.gene001804:intron 40.0%
!!! AGTTTTGAGATTGTAAGGGC+CGG + chr8.3:63861099-63861118 None:intergenic 40.0%
CAGGGAATACATGAGATTGG+AGG - chr8.3:63860057-63860076 MS.gene001804:CDS 45.0%
CTGGCAAATTACCCACCATA+TGG - chr8.3:63858617-63858636 MS.gene001804:CDS 45.0%
GAATACATGAGATTGGAGGG+AGG - chr8.3:63860061-63860080 MS.gene001804:CDS 45.0%
GAGATTGGAGGGAGGAAATT+TGG - chr8.3:63860069-63860088 MS.gene001804:CDS 45.0%
GCCATTCATCCTACTGAAAG+TGG - chr8.3:63861026-63861045 MS.gene001804:CDS 45.0%
GGAACCCTTCCAAATTTGGT+AGG - chr8.3:63860301-63860320 MS.gene001804:intron 45.0%
TGAAGAAACCACAACTCTGC+TGG - chr8.3:63859574-63859593 MS.gene001804:intron 45.0%
! AATTTTGCATCAGCTGGAGC+TGG - chr8.3:63859020-63859039 MS.gene001804:intron 45.0%
! ATTTTGCATCAGCTGGAGCT+GGG - chr8.3:63859021-63859040 MS.gene001804:intron 45.0%
! GGAGTCAATTTTGCATCAGC+TGG - chr8.3:63859014-63859033 MS.gene001804:intron 45.0%
!! TGTGGTAGTGGACCTTACAA+GGG - chr8.3:63860924-63860943 MS.gene001804:intron 45.0%
!!! ATCAGCTAGTTTTGAGGTCC+TGG - chr8.3:63859240-63859259 MS.gene001804:intron 45.0%
!!! TGCTTACATTTTGGGACGGA+GGG + chr8.3:63858820-63858839 None:intergenic 45.0%
!!! TTGCTTACATTTTGGGACGG+AGG + chr8.3:63858821-63858840 None:intergenic 45.0%
ACAAATTTGCGGGTCACGGA+AGG + chr8.3:63860681-63860700 None:intergenic 50.0%
! TTTTGCATCAGCTGGAGCTG+GGG - chr8.3:63859022-63859041 MS.gene001804:intron 50.0%
!! CTGTGGTAGTGGACCTTACA+AGG - chr8.3:63860923-63860942 MS.gene001804:intron 50.0%
GAAGGAGGAGTAGCATGCTG+TGG - chr8.3:63860906-63860925 MS.gene001804:intron 55.0%
GGAGTAGCATGCTGTGGTAG+TGG - chr8.3:63860912-63860931 MS.gene001804:intron 55.0%
! AGCTTTGGCCAGCAGAGTTG+TGG + chr8.3:63859585-63859604 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 63858497 63861133 63858497 ID=MS.gene001804
chr8.3 mRNA 63858497 63861133 63858497 ID=MS.gene001804.t1;Parent=MS.gene001804
chr8.3 exon 63860926 63861133 63860926 ID=MS.gene001804.t1.exon1;Parent=MS.gene001804.t1
chr8.3 CDS 63860926 63861133 63860926 ID=cds.MS.gene001804.t1;Parent=MS.gene001804.t1
chr8.3 exon 63860560 63860681 63860560 ID=MS.gene001804.t1.exon2;Parent=MS.gene001804.t1
chr8.3 CDS 63860560 63860681 63860560 ID=cds.MS.gene001804.t1;Parent=MS.gene001804.t1
chr8.3 exon 63859915 63860127 63859915 ID=MS.gene001804.t1.exon3;Parent=MS.gene001804.t1
chr8.3 CDS 63859915 63860127 63859915 ID=cds.MS.gene001804.t1;Parent=MS.gene001804.t1
chr8.3 exon 63859312 63859570 63859312 ID=MS.gene001804.t1.exon4;Parent=MS.gene001804.t1
chr8.3 CDS 63859312 63859570 63859312 ID=cds.MS.gene001804.t1;Parent=MS.gene001804.t1
chr8.3 exon 63858497 63858732 63858497 ID=MS.gene001804.t1.exon5;Parent=MS.gene001804.t1
chr8.3 CDS 63858497 63858732 63858497 ID=cds.MS.gene001804.t1;Parent=MS.gene001804.t1
Gene Sequence

>MS.gene001804

ATGCTAATTCCAACACTTGGTAACATATGTTTGCCAAAAGAACATGTTGCGTTGTTTGTATTTGGAGATTCATTATTTGATGTCGGAAACAATAATTATATCAATACTACTGCTGATTATCTGGCAAATTACCCACCATATGGTGAAACCTTCTTCAAGTATCCATCTGGTAGATTTTCTGATGGACGTGTCATTCCAGATTTCATAGGTAAGAATATATGTGTCTGCTTGTGAAACCGTTTGAGTGATGAAAAAAAAATTTCAACTTATTTTTATAATTTCTCCATAATAATTTATCAAAACAGTGCTTATAGCTTACTCCCTCCGTCCCAAAATGTAAGCAAAAATTGGTCAACAAAAGTTAATGTAAACAATTTAACCTAATTTTAACTTTTATCGTAATTTAATTACATATTCCAATTAACAATCTGATCATGATTACTTTGTTGCAGCTGAGTATGCTAAGTTACCATTAATTCAACCATATCTATTTCCTGGTTCTCAACTATATATCAATGGAGTCAATTTTGCATCAGCTGGAGCTGGGGCTTTAGTAGAAACTCATCAAGGACTGGTCTGTTCTATGTTCTTAATTACTTAATTTAATGATCTTGTGCTTGTTAATTTTTTAGCTTAATTGCGGTTTATGCCTCGTGTTTTTACTTGTCTAGATTTTTTTGGTCACTCACCAAGATTTCTAAAACCAAAAATGATGAAGTAACATTTTTTTTGGCGGCCTCTTTATCAGCTAGTTTTGAGGTCCTGGTTGCAATACCAGATTGTATTGAAATACTATAAGTTGTTTCCTCTCAATTTTTTTTTTTTTGACATGTCAATAAAAAATTGGTACATTGTCATTTTTAGATCCAAAAATCCGAGTTGTTTAGTTATTTGACAAAAATTATTTATAGATTATGTTTTTTTTATACAAATATTTATAGATTATGTAGCATATGACATTTGTGTATAAGAGAGATTTGACCATATGGTGTTTATATATTTTCAGGTGATAGATCTAAAGACACAATTGAGTTATCTGAAGAATGTCAAGAAAGTATTGAGGCAGAAATTAGGAGATGAAGAAACCACAACTCTGCTGGCCAAAGCTGTTTACTTAATCAACATTGGAGGCAATGATTATTTTGTAGAAAATTCGAGCTTATACACTCATGAAAAATACGTATCAATGGTTGTTGGTAATCTTACAACTGTGATCAAAGTATGTCAAAGTTACTTCACTCCTGTATTTTCTAATATCGTAGTTCTTTTGGTTATGATTAAAACATGTTTGGATTGACTTATTTAAACGGTTGTTAGGCGCTGTTTGATAAAATCTATGAAAACAACTCATGATATACATGTCTATAACCTCGTATCTACTTATTTTTAATAATTATATGAACATAATTTGACTTTATTTATATTTTTAATTGAAATGATGTGTACATAAACACTTGTATAATAGGTGCTTACGCATAATTAAGATGTTTATTTAAACATTGCCTAAATCTTCTACTATTCTAATTTTTTATGTATATAATTCATTCCAATATTTAATTTCAGGGAATACATGAGATTGGAGGGAGGAAATTTGGGATTCTTAACACACCATCACTTGGTTGTTTTCCAACCATCAAGGCATTTGTAAATGGAACTAAATCAAGTTCTTGCATTGAAGAGTATTCAACACTTGCCAAAGTGCACAACACTAAACTATCAGTGAAACTTCAGAATTTAACGAAACAGATCAAAGGATTTAAATATTCTTATTTTGATTTCTTTGATCTATTTATTGAAGTCATAAGGAACCCTTCCAAATTTGGTAGGTTACGACATATTCATTTTTAGCATTATTAATTTCTAAAATTAAATACTGTTACATCCTTCAATAATTTTGTCGAATATAATTTTTTTAATTTAATTTATATGTCTCGTTAGCGTAAAATGTTTTACAATGTCAAGAAATTATAGCCAATTAAATCAATGACTTCAAAAGTAGTTATGAATAAAATAAAATATTTGAATAATTTTATAGTTATGATTGTTTGACAGTGTAAAACATATTTACGTTGACAACATATATGAAATATATTATTAATTTTTTTGTTATTTTGACTAGTATAGTCCGTATTTTTTTACACCATAACACATTTAATGTATCAACCTAAACATTGGGTTATTCCTTCCGTGACCCGCAAATTTGTATTGTGAAATTGACTTACCATCAAATAGGTTATATTCTAATAACATATCAAATGAGTTAATAGACATAACTACATAACTTATATGATATTAGTTTTCAATATAATGGTGAGTTTTGTAATATTCAAATATTACATTGTTGTAGTTTCTTTATATTTATCTAATTCTAAAATTTGTGGCTTAATTTGATGATGAAAAGGTTTGAAAGAAGGAGGAGTAGCATGCTGTGGTAGTGGACCTTACAAGGGATATTACAGTTGTGGAGGTAAAAGAGAAGTAAGAGATTATGACTTGTGTGGTAATCCTTCTGAATATTTGTTCTTTGATGCCATTCATCCTACTGAAAGTGGTAGTAGGATTATTTCCCAATTTATGTGGAGTGGAAATAAGAGTATCACCGGCCCTTACAATCTCAAAACTCTGTTTGAAGAATAA
Protein sequence

>MS.gene001804.t1

MLIPTLGNICLPKEHVALFVFGDSLFDVGNNNYINTTADYLANYPPYGETFFKYPSGRFSDGRVIPDFIAEYAKLPLIQPYLFPGSQLYINGVNFASAGAGALVETHQGLVIDLKTQLSYLKNVKKVLRQKLGDEETTTLLAKAVYLINIGGNDYFVENSSLYTHEKYVSMVVGNLTTVIKGIHEIGGRKFGILNTPSLGCFPTIKAFVNGTKSSSCIEEYSTLAKVHNTKLSVKLQNLTKQIKGFKYSYFDFFDLFIEVIRNPSKFGLKEGGVACCGSGPYKGYYSCGGKREVRDYDLCGNPSEYLFFDAIHPTESGSRIISQFMWSGNKSITGPYNLKTLFEE