AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene92254

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92254.t1 MTR_8g022790 97.619 336 8 0 1 336 26 361 0.0 679
MS.gene92254.t1 MTR_8g031420 56.305 341 133 4 5 335 28 362 6.88e-139 398
MS.gene92254.t1 MTR_8g031430 56.305 341 133 4 5 335 30 364 1.05e-135 390
MS.gene92254.t1 MTR_8g031390 55.030 338 135 5 5 332 30 360 3.99e-128 371
MS.gene92254.t1 MTR_8g031400 52.786 341 145 4 5 335 30 364 9.43e-128 370
MS.gene92254.t1 MTR_8g022810 49.412 340 159 4 8 335 37 375 8.00e-114 335
MS.gene92254.t1 MTR_8g031390 56.207 290 113 4 5 287 30 312 9.87e-111 325
MS.gene92254.t1 MTR_2g044100 50.599 334 153 4 12 334 43 375 5.52e-109 323
MS.gene92254.t1 MTR_8g022810 43.529 340 126 5 8 335 37 322 1.50e-86 263
MS.gene92254.t1 MTR_3g005650 34.535 333 205 5 12 336 30 357 3.75e-59 194
MS.gene92254.t1 MTR_5g022630 34.375 320 196 7 12 319 43 360 4.56e-57 189
MS.gene92254.t1 MTR_8g079050 34.682 346 201 11 11 336 36 376 2.13e-56 187
MS.gene92254.t1 MTR_5g093090 33.136 338 204 7 12 333 28 359 1.16e-55 185
MS.gene92254.t1 MTR_8g075230 35.714 322 187 8 12 319 36 351 1.42e-55 185
MS.gene92254.t1 MTR_8g014910 35.168 327 196 8 12 325 32 355 3.59e-55 184
MS.gene92254.t1 MTR_8g074570 34.393 346 197 10 8 333 34 369 6.72e-55 184
MS.gene92254.t1 MTR_2g033930 34.211 342 196 10 12 335 32 362 9.47e-55 183
MS.gene92254.t1 MTR_1g079530 34.694 343 190 13 12 336 29 355 2.27e-54 182
MS.gene92254.t1 MTR_7g116520 32.743 339 208 8 12 336 34 366 1.23e-53 180
MS.gene92254.t1 MTR_3g464730 35.202 321 187 10 9 314 25 339 3.03e-53 179
MS.gene92254.t1 MTR_3g052490 33.333 348 204 10 8 336 28 366 3.68e-53 179
MS.gene92254.t1 MTR_3g082830 35.535 318 183 10 12 314 38 348 1.43e-52 177
MS.gene92254.t1 MTR_5g084770 34.084 311 192 6 12 311 28 336 1.72e-52 177
MS.gene92254.t1 MTR_2g033920 33.529 340 209 9 9 335 32 367 2.28e-52 177
MS.gene92254.t1 MTR_2g084585 34.395 314 192 6 12 314 30 340 1.65e-51 174
MS.gene92254.t1 MTR_3g052480 33.048 351 202 10 8 336 29 368 3.84e-51 174
MS.gene92254.t1 MTR_7g116570 31.176 340 218 7 9 336 31 366 5.78e-51 173
MS.gene92254.t1 MTR_2g461580 31.832 333 200 8 12 333 31 347 7.26e-51 172
MS.gene92254.t1 MTR_5g084790 35.780 327 194 8 3 317 23 345 8.63e-51 172
MS.gene92254.t1 MTR_8g074580 31.606 386 195 11 8 333 40 416 1.05e-50 174
MS.gene92254.t1 MTR_5g022640 32.812 320 200 7 12 319 43 359 1.15e-50 172
MS.gene92254.t1 MTR_4g087985 33.846 325 182 11 9 309 33 348 1.39e-50 172
MS.gene92254.t1 MTR_1g069175 31.884 345 205 12 12 336 33 367 1.77e-50 172
MS.gene92254.t1 MTR_4g035353 30.946 349 223 8 1 336 20 363 1.88e-50 172
MS.gene92254.t1 MTR_4g122200 33.041 342 202 11 12 335 35 367 3.64e-50 171
MS.gene92254.t1 MTR_2g100620 33.851 322 197 8 12 320 31 349 6.13e-50 170
MS.gene92254.t1 MTR_3g098270 33.728 338 207 7 12 335 34 368 3.24e-49 169
MS.gene92254.t1 MTR_5g078210 33.758 314 190 9 14 315 27 334 3.44e-49 168
MS.gene92254.t1 MTR_3g435540 32.907 313 194 7 14 314 25 333 4.20e-49 168
MS.gene92254.t1 MTR_4g056160 36.164 318 184 8 12 314 27 340 5.41e-49 167
MS.gene92254.t1 MTR_1g025760 35.484 310 180 11 12 307 80 383 5.79e-49 169
MS.gene92254.t1 MTR_1g024890 31.858 339 211 8 12 336 32 364 6.76e-49 168
MS.gene92254.t1 MTR_5g084750 33.025 324 198 10 1 310 18 336 7.21e-49 167
MS.gene92254.t1 MTR_3g052580 30.925 346 214 9 8 336 24 361 9.54e-49 168
MS.gene92254.t1 MTR_2g017925 35.629 334 193 11 12 335 33 354 1.31e-48 167
MS.gene92254.t1 MTR_3g052580 30.925 346 214 9 8 336 23 360 1.56e-48 168
MS.gene92254.t1 MTR_5g074270 33.540 322 200 7 6 315 27 346 2.35e-48 166
MS.gene92254.t1 MTR_3g024510 32.537 335 210 9 14 336 40 370 2.52e-48 166
MS.gene92254.t1 MTR_7g116510 30.460 348 223 8 3 336 16 358 3.26e-48 166
MS.gene92254.t1 MTR_3g021460 32.229 332 200 8 12 333 31 347 4.35e-48 165
MS.gene92254.t1 MTR_0565s0010 31.858 339 208 11 14 336 34 365 1.57e-47 164
MS.gene92254.t1 MTR_1g079540 31.395 344 214 9 7 336 28 363 2.48e-47 164
MS.gene92254.t1 MTR_0009s0250 33.750 320 183 11 8 314 29 332 2.92e-47 163
MS.gene92254.t1 MTR_2g015080 33.742 326 189 10 6 309 32 352 3.05e-47 164
MS.gene92254.t1 MTR_4g108690 32.268 313 196 7 14 314 29 337 4.22e-47 163
MS.gene92254.t1 MTR_7g008060 32.047 337 202 10 9 334 30 350 4.47e-47 163
MS.gene92254.t1 MTR_3g114090 34.091 308 191 8 12 309 36 341 5.05e-47 162
MS.gene92254.t1 MTR_1g025780 34.839 310 184 9 12 309 41 344 6.48e-47 162
MS.gene92254.t1 MTR_7g116500 30.294 340 211 9 12 334 33 363 4.88e-46 160
MS.gene92254.t1 MTR_4g056280 35.048 311 188 6 12 311 30 337 1.28e-45 159
MS.gene92254.t1 MTR_1g025680 34.194 310 188 9 12 309 34 339 3.23e-45 160
MS.gene92254.t1 MTR_6g021530 30.060 336 218 7 14 336 31 362 4.83e-45 157
MS.gene92254.t1 MTR_1g025720 32.492 317 197 9 12 316 37 348 2.27e-44 155
MS.gene92254.t1 MTR_8g075220 30.368 326 204 9 12 319 40 360 2.80e-44 155
MS.gene92254.t1 MTR_5g009100 32.544 338 201 13 14 333 48 376 3.32e-44 156
MS.gene92254.t1 MTR_7g116870 32.571 350 181 11 12 323 33 365 6.09e-44 155
MS.gene92254.t1 MTR_4g019880 30.321 343 213 10 12 336 32 366 1.19e-43 154
MS.gene92254.t1 MTR_1g025700 33.442 308 192 8 12 309 50 354 1.25e-43 154
MS.gene92254.t1 MTR_2g017955 33.828 337 200 12 12 335 33 359 1.57e-43 154
MS.gene92254.t1 MTR_3g023220 32.335 334 202 10 12 335 33 352 4.43e-43 152
MS.gene92254.t1 MTR_8g087870 31.737 334 208 9 12 336 29 351 1.48e-42 150
MS.gene92254.t1 MTR_3g114120 32.390 318 198 8 12 317 47 359 5.56e-42 150
MS.gene92254.t1 MTR_8g075200 29.653 317 209 7 12 317 41 354 5.84e-42 150
MS.gene92254.t1 MTR_8g074560 30.199 351 210 12 9 335 28 367 1.25e-41 149
MS.gene92254.t1 MTR_8g087890 30.205 341 210 11 14 336 33 363 1.60e-41 148
MS.gene92254.t1 MTR_8g028160 31.302 361 198 9 13 336 37 384 2.27e-41 149
MS.gene92254.t1 MTR_1g025910 29.085 306 201 8 17 311 41 341 2.13e-40 145
MS.gene92254.t1 MTR_2g017875 31.085 341 206 12 12 336 34 361 2.14e-40 145
MS.gene92254.t1 MTR_3g005660 29.464 336 217 9 13 333 37 367 1.31e-38 140
MS.gene92254.t1 MTR_2g017965 30.178 338 210 11 13 335 34 360 3.32e-38 140
MS.gene92254.t1 MTR_5g093090 32.342 269 165 6 12 269 28 290 3.81e-37 135
MS.gene92254.t1 MTR_7g087190 31.700 347 194 11 12 323 43 381 1.04e-36 136
MS.gene92254.t1 MTR_2g033920 34.328 268 165 8 9 269 32 295 1.37e-36 134
MS.gene92254.t1 MTR_1g030220 31.897 348 182 10 12 320 40 371 1.42e-36 136
MS.gene92254.t1 MTR_7g033155 27.945 365 206 8 7 323 33 388 2.00e-36 135
MS.gene92254.t1 MTR_2g015590 30.769 338 201 10 10 320 29 360 2.29e-36 135
MS.gene92254.t1 MTR_5g078210 32.824 262 166 7 14 269 27 284 3.09e-36 133
MS.gene92254.t1 MTR_7g113860 30.000 350 187 10 12 320 29 361 6.29e-36 134
MS.gene92254.t1 MTR_8g089805 29.480 346 196 10 12 320 40 374 1.88e-35 133
MS.gene92254.t1 MTR_5g083040 29.874 318 200 10 9 308 29 341 9.93e-35 130
MS.gene92254.t1 MTR_7g111780 30.488 328 199 9 8 317 32 348 1.74e-34 129
MS.gene92254.t1 MTR_7g113860 29.714 350 188 11 12 320 35 367 2.16e-34 130
MS.gene92254.t1 MTR_1g092750 29.179 329 196 9 13 324 41 349 2.92e-34 129
MS.gene92254.t1 MTR_1g030275 29.912 341 196 8 12 320 39 368 3.42e-34 129
MS.gene92254.t1 MTR_7g104220 34.185 313 167 16 13 307 43 334 4.49e-34 128
MS.gene92254.t1 MTR_7g033150 27.809 356 197 9 12 323 35 374 3.74e-33 126
MS.gene92254.t1 MTR_1g092690 28.923 325 184 11 8 307 39 341 4.89e-33 125
MS.gene92254.t1 MTR_2g015630 30.145 345 201 11 17 333 36 368 5.83e-33 126
MS.gene92254.t1 MTR_1g092760 30.868 311 179 11 13 307 40 330 1.83e-32 124
MS.gene92254.t1 MTR_1g030268 31.195 343 189 11 12 320 40 369 3.37e-32 124
MS.gene92254.t1 MTR_2g017915 29.377 337 192 11 13 335 34 338 3.60e-32 123
MS.gene92254.t1 MTR_5g087690 28.349 321 206 8 12 319 50 359 9.00e-32 122
MS.gene92254.t1 MTR_1g082390 29.086 361 207 11 1 325 20 367 2.12e-31 121
MS.gene92254.t1 MTR_1g060490 29.773 309 185 12 13 307 38 328 6.04e-31 120
MS.gene92254.t1 MTR_1g060500 31.546 317 177 12 13 307 41 339 6.59e-31 120
MS.gene92254.t1 MTR_7g033165 30.347 346 193 11 12 321 33 366 6.80e-31 120
MS.gene92254.t1 MTR_2g015650 28.409 352 216 11 1 324 20 363 7.32e-31 120
MS.gene92254.t1 MTR_1g030340 30.058 346 192 10 12 320 42 374 1.21e-30 120
MS.gene92254.t1 MTR_1g030230 29.446 343 197 9 12 320 32 363 1.94e-30 119
MS.gene92254.t1 MTR_2g087292 28.846 312 142 9 7 314 28 263 2.54e-30 116
MS.gene92254.t1 MTR_6g007090 27.778 342 211 7 9 323 36 368 3.51e-30 118
MS.gene92254.t1 MTR_2g043980 31.065 338 193 12 4 320 28 346 5.08e-30 117
MS.gene92254.t1 MTR_4g104240 25.826 333 218 6 13 323 40 365 6.13e-30 117
MS.gene92254.t1 MTR_6g007095 30.523 344 193 10 12 323 41 370 7.22e-30 120
MS.gene92254.t1 MTR_6g007095 27.181 298 199 5 40 323 393 686 1.03e-24 105
MS.gene92254.t1 MTR_6g007100 30.060 336 194 13 12 323 33 351 2.24e-29 115
MS.gene92254.t1 MTR_2g015580 28.902 346 208 11 8 324 43 379 2.40e-29 116
MS.gene92254.t1 MTR_2g017925 33.750 240 142 8 103 335 22 251 1.21e-27 109
MS.gene92254.t1 MTR_2g015670 28.286 350 205 11 1 324 20 349 1.35e-27 111
MS.gene92254.t1 MTR_2g079080 28.190 337 214 11 1 320 19 344 1.39e-27 111
MS.gene92254.t1 MTR_2g079090 28.190 337 214 11 1 320 19 344 1.60e-27 110
MS.gene92254.t1 MTR_0029s0050 28.190 337 214 11 1 320 19 344 1.64e-27 110
MS.gene92254.t1 MTR_2g015590 31.047 277 168 8 10 269 29 299 1.89e-27 110
MS.gene92254.t1 MTR_0029s0100 28.190 337 214 11 1 320 19 344 3.76e-27 109
MS.gene92254.t1 MTR_1g092740 27.885 312 187 9 13 307 39 329 1.38e-25 105
MS.gene92254.t1 MTR_3g448360 26.420 352 216 11 1 321 18 357 1.87e-25 105
MS.gene92254.t1 MTR_8g038680 26.331 357 220 10 1 323 15 362 4.79e-25 104
MS.gene92254.t1 MTR_7g033165 31.343 268 150 8 12 257 33 288 6.21e-25 102
MS.gene92254.t1 MTR_3g463930 27.577 359 202 16 4 320 38 380 1.01e-24 103
MS.gene92254.t1 MTR_3g463960 26.836 354 204 15 4 320 38 373 1.55e-24 103
MS.gene92254.t1 MTR_3g463950 26.836 354 204 15 4 320 38 373 1.55e-24 103
MS.gene92254.t1 MTR_3g463970 26.836 354 204 15 4 320 38 373 1.55e-24 103
MS.gene92254.t1 MTR_3g463940 26.836 354 204 15 4 320 38 373 1.55e-24 103
MS.gene92254.t1 MTR_1g030268 31.047 277 159 8 12 269 40 303 3.33e-24 101
MS.gene92254.t1 MTR_0127s0040 28.279 244 158 8 104 336 1 238 2.53e-23 97.1
MS.gene92254.t1 MTR_3g069780 27.586 348 214 11 1 320 19 356 1.01e-22 97.8
MS.gene92254.t1 MTR_3g438030 27.586 348 214 11 1 320 19 356 1.90e-22 97.1
MS.gene92254.t1 MTR_1g079590 33.880 183 112 5 12 187 31 211 2.68e-22 93.6
MS.gene92254.t1 MTR_7g111780 29.435 248 151 6 87 317 9 249 1.07e-21 93.2
MS.gene92254.t1 MTR_1g060520 27.532 316 155 12 13 307 41 303 1.57e-21 93.6
MS.gene92254.t1 MTR_1108s0010 29.187 209 124 4 112 311 3 196 3.91e-21 90.5
MS.gene92254.t1 MTR_3g069520 26.629 353 211 11 1 321 19 355 4.78e-21 93.2
MS.gene92254.t1 MTR_7g113860 26.756 299 165 9 63 320 8 293 8.97e-21 91.3
MS.gene92254.t1 MTR_8g012540 25.000 308 203 7 1 288 15 314 4.51e-20 90.1
MS.gene92254.t1 MTR_8g089805 25.667 300 180 8 58 320 13 306 6.25e-20 89.4
MS.gene92254.t1 MTR_5g093090 33.898 177 104 5 12 177 28 202 8.20e-20 86.7
MS.gene92254.t1 MTR_5g074210 31.944 144 91 3 180 317 62 204 5.11e-19 84.7
MS.gene92254.t1 MTR_1g030265 26.621 293 169 8 65 320 53 336 7.80e-19 86.7
MS.gene92254.t1 MTR_2g018015 34.653 202 113 8 12 201 36 230 1.07e-18 85.5
MS.gene92254.t1 MTR_2g043990 30.175 285 144 10 4 269 90 338 4.05e-17 81.3
MS.gene92254.t1 MTR_4g036375 34.483 145 88 4 12 151 30 172 4.38e-16 75.9
MS.gene92254.t1 MTR_6g049230 40.541 111 63 2 171 281 63 170 1.54e-15 74.3
MS.gene92254.t1 MTR_4g036385 35.922 103 60 1 217 313 21 123 3.15e-14 69.3
MS.gene92254.t1 MTR_2g017895 24.101 278 171 12 72 336 17 267 4.22e-13 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92254.t1 AT1G53920 50.882 340 149 6 12 336 48 384 1.01e-119 350
MS.gene92254.t1 AT5G40990 49.422 346 161 4 4 336 29 373 2.82e-119 349
MS.gene92254.t1 AT1G53940 48.547 344 163 4 6 336 33 375 3.18e-114 336
MS.gene92254.t1 AT3G14225 45.640 344 173 4 6 336 31 373 3.90e-108 320
MS.gene92254.t1 AT3G14225 45.402 348 172 5 6 336 31 377 3.21e-107 318
MS.gene92254.t1 AT1G53990 45.665 346 167 5 4 336 27 364 2.07e-102 305
MS.gene92254.t1 AT1G53940 48.134 268 136 2 6 271 33 299 1.05e-85 261
MS.gene92254.t1 AT1G71120 33.531 337 197 7 12 333 31 355 6.62e-61 199
MS.gene92254.t1 AT5G08460 33.828 337 205 9 12 333 49 382 7.03e-56 186
MS.gene92254.t1 AT2G04570 35.347 331 194 9 12 330 28 350 2.32e-55 184
MS.gene92254.t1 AT4G26790 35.938 320 185 10 9 314 26 339 1.68e-54 182
MS.gene92254.t1 AT4G26790 35.938 320 185 10 9 314 26 339 1.68e-54 182
MS.gene92254.t1 AT1G54030 33.945 327 193 10 13 334 53 361 2.59e-54 183
MS.gene92254.t1 AT5G41890 35.244 349 194 12 14 336 33 375 4.33e-53 179
MS.gene92254.t1 AT1G71691 34.139 331 204 6 12 333 55 380 6.72e-53 179
MS.gene92254.t1 AT1G20132 32.508 323 202 8 8 318 57 375 3.50e-52 177
MS.gene92254.t1 AT5G15720 32.544 338 212 7 12 336 30 364 5.88e-52 176
MS.gene92254.t1 AT3G14820 36.538 312 178 10 12 311 32 335 1.04e-51 175
MS.gene92254.t1 AT1G20120 34.043 329 190 11 12 322 78 397 1.64e-51 176
MS.gene92254.t1 AT5G45960 36.890 328 177 14 8 314 41 359 2.29e-51 174
MS.gene92254.t1 AT2G23540 33.524 349 201 12 11 336 47 387 3.11e-51 174
MS.gene92254.t1 AT1G06990 34.713 314 182 12 12 309 37 343 3.28e-51 174
MS.gene92254.t1 AT3G50400 33.523 352 204 13 8 336 30 374 8.60e-51 173
MS.gene92254.t1 AT5G42170 33.125 320 194 10 13 319 51 363 4.98e-50 171
MS.gene92254.t1 AT5G33370 32.448 339 209 8 12 336 30 362 5.13e-49 168
MS.gene92254.t1 AT2G40250 33.856 319 191 11 12 314 36 350 6.40e-49 168
MS.gene92254.t1 AT5G45950 31.288 326 204 10 2 315 28 345 1.18e-48 167
MS.gene92254.t1 AT2G42990 33.228 316 187 10 12 311 28 335 1.43e-48 166
MS.gene92254.t1 AT1G29660 33.036 336 207 10 14 336 34 364 2.87e-48 166
MS.gene92254.t1 AT3G53100 32.492 317 194 9 12 314 29 339 3.15e-48 166
MS.gene92254.t1 AT5G37690 32.588 313 193 8 14 314 29 335 4.48e-48 165
MS.gene92254.t1 AT5G03820 33.962 318 190 10 12 314 33 345 1.00e-47 164
MS.gene92254.t1 AT3G16370 32.919 322 193 10 12 317 30 344 1.74e-47 164
MS.gene92254.t1 AT5G03820 33.962 318 190 10 12 314 61 373 4.29e-47 164
MS.gene92254.t1 AT5G22810 34.700 317 190 8 12 314 34 347 4.57e-47 163
MS.gene92254.t1 AT4G28780 29.586 338 220 8 12 336 31 363 1.00e-46 162
MS.gene92254.t1 AT3G04290 30.861 337 213 8 9 331 26 356 2.59e-46 161
MS.gene92254.t1 AT1G20135 33.438 317 190 10 3 309 17 322 3.96e-46 159
MS.gene92254.t1 AT1G75890 32.298 322 200 9 12 317 47 366 6.76e-46 160
MS.gene92254.t1 AT5G18430 32.070 343 207 10 12 336 28 362 6.93e-46 160
MS.gene92254.t1 AT1G20130 32.012 328 194 11 12 317 184 504 8.49e-46 163
MS.gene92254.t1 AT1G20130 32.012 328 194 11 12 317 204 524 1.09e-45 163
MS.gene92254.t1 AT1G75890 32.298 322 200 9 12 317 76 395 1.32e-45 160
MS.gene92254.t1 AT3G14210 32.143 336 199 11 12 333 36 356 2.11e-45 159
MS.gene92254.t1 AT5G03810 31.962 316 198 7 12 314 30 341 9.73e-45 157
MS.gene92254.t1 AT1G71250 30.357 336 214 8 12 333 41 370 1.09e-44 157
MS.gene92254.t1 AT1G58430 32.716 324 192 11 12 317 35 350 1.38e-44 156
MS.gene92254.t1 AT1G54010 31.045 335 200 12 13 333 37 354 1.69e-44 157
MS.gene92254.t1 AT1G75890 31.045 335 200 9 12 317 47 379 2.21e-44 156
MS.gene92254.t1 AT1G54000 31.437 334 202 11 12 333 36 354 2.36e-44 156
MS.gene92254.t1 AT1G59406 32.372 312 192 10 12 311 30 334 3.18e-44 155
MS.gene92254.t1 AT1G59030 32.372 312 192 10 12 311 30 334 3.18e-44 155
MS.gene92254.t1 AT1G58725 32.372 312 192 10 12 311 30 334 3.18e-44 155
MS.gene92254.t1 AT1G74460 31.646 316 200 7 14 317 25 336 4.28e-44 155
MS.gene92254.t1 AT1G54020 31.627 332 199 12 13 334 34 347 5.66e-44 155
MS.gene92254.t1 AT2G19050 30.564 337 200 10 14 336 33 349 1.11e-43 154
MS.gene92254.t1 AT5G63170 32.803 314 175 13 12 309 28 321 1.12e-43 153
MS.gene92254.t1 AT2G19060 32.407 324 183 12 14 320 32 336 1.14e-43 154
MS.gene92254.t1 AT5G37690 32.484 314 184 10 14 314 29 327 1.80e-43 153
MS.gene92254.t1 AT3G14220 30.746 335 201 14 13 333 33 350 1.38e-42 151
MS.gene92254.t1 AT1G75900 30.650 323 201 9 12 319 43 357 2.62e-42 150
MS.gene92254.t1 AT5G55050 32.267 344 200 13 13 333 40 373 5.96e-42 150
MS.gene92254.t1 AT5G45670 30.321 343 202 10 14 333 31 359 6.06e-42 149
MS.gene92254.t1 AT4G18970 30.925 346 202 11 14 336 30 361 7.39e-42 149
MS.gene92254.t1 AT4G30140 30.488 328 204 10 14 333 35 346 8.64e-42 149
MS.gene92254.t1 AT1G29670 30.383 339 213 12 13 336 33 363 1.33e-41 149
MS.gene92254.t1 AT1G28640 30.321 343 202 10 8 321 31 365 1.41e-41 149
MS.gene92254.t1 AT1G75880 32.602 319 199 8 12 317 52 367 1.66e-41 149
MS.gene92254.t1 AT2G03980 29.467 319 199 9 12 314 43 351 3.21e-41 147
MS.gene92254.t1 AT2G03980 29.467 319 199 9 12 314 43 351 3.21e-41 147
MS.gene92254.t1 AT2G03980 29.467 319 199 9 12 314 43 351 3.21e-41 147
MS.gene92254.t1 AT2G03980 29.467 319 199 9 12 314 43 351 3.21e-41 147
MS.gene92254.t1 AT4G18970 30.925 346 202 11 14 336 30 361 3.43e-41 149
MS.gene92254.t1 AT4G10950 29.032 341 217 11 12 335 71 403 4.35e-41 148
MS.gene92254.t1 AT2G30310 30.435 322 202 10 12 317 34 349 4.52e-41 147
MS.gene92254.t1 AT1G29670 30.383 339 213 12 13 336 101 431 8.99e-41 148
MS.gene92254.t1 AT1G75880 32.390 318 200 8 12 317 52 366 9.12e-41 147
MS.gene92254.t1 AT2G30220 31.056 322 200 10 12 317 33 348 1.12e-40 146
MS.gene92254.t1 AT4G01130 30.986 355 190 10 12 327 34 372 1.23e-40 146
MS.gene92254.t1 AT2G24560 31.366 322 199 10 12 317 34 349 4.71e-40 144
MS.gene92254.t1 AT1G58520 31.746 315 183 12 12 311 30 327 9.94e-40 143
MS.gene92254.t1 AT1G58525 31.746 315 183 12 12 311 30 327 9.94e-40 143
MS.gene92254.t1 AT1G75920 32.797 311 195 9 12 315 29 332 5.65e-39 141
MS.gene92254.t1 AT1G54030 35.081 248 141 8 12 257 52 281 6.51e-39 140
MS.gene92254.t1 AT5G15720 33.459 266 166 6 12 269 30 292 7.70e-39 140
MS.gene92254.t1 AT4G10950 29.326 341 212 13 12 335 71 399 8.39e-39 142
MS.gene92254.t1 AT2G19010 29.305 331 208 10 13 333 31 345 1.64e-38 140
MS.gene92254.t1 AT1G75930 34.603 315 188 11 12 317 29 334 2.02e-38 140
MS.gene92254.t1 AT2G19010 29.217 332 209 10 12 333 60 375 5.66e-38 139
MS.gene92254.t1 AT1G71691 33.969 262 164 5 12 269 55 311 1.86e-37 136
MS.gene92254.t1 AT1G28650 30.029 343 203 11 8 321 33 367 1.96e-37 138
MS.gene92254.t1 AT3G43570 30.449 312 169 11 12 311 30 305 2.44e-37 136
MS.gene92254.t1 AT1G33811 30.655 336 215 12 13 333 35 367 4.07e-37 137
MS.gene92254.t1 AT2G31540 31.056 322 200 10 12 317 35 350 4.82e-37 136
MS.gene92254.t1 AT3G26430 32.081 346 187 11 12 320 31 365 8.97e-37 136
MS.gene92254.t1 AT1G71691 30.035 283 186 5 63 336 3 282 9.98e-37 134
MS.gene92254.t1 AT2G27360 29.545 352 198 13 12 330 33 367 3.45e-36 135
MS.gene92254.t1 AT1G75920 31.288 326 195 9 12 315 24 342 6.78e-36 133
MS.gene92254.t1 AT1G23500 32.602 319 191 13 12 320 35 339 8.94e-36 132
MS.gene92254.t1 AT2G19050 31.746 252 149 6 14 256 33 270 1.12e-35 131
MS.gene92254.t1 AT5G03610 32.188 320 181 11 7 308 38 339 1.14e-35 133
MS.gene92254.t1 AT1G73610 30.128 312 201 7 12 317 35 335 1.30e-35 132
MS.gene92254.t1 AT1G75910 32.372 312 196 10 12 315 28 332 3.31e-35 131
MS.gene92254.t1 AT1G54790 29.745 353 190 11 9 320 29 364 7.07e-35 131
MS.gene92254.t1 AT3G09930 32.166 314 178 11 13 308 40 336 3.02e-34 129
MS.gene92254.t1 AT3G09930 32.166 314 178 11 13 308 40 336 3.02e-34 129
MS.gene92254.t1 AT1G28660 29.412 340 207 11 8 320 31 364 3.34e-34 129
MS.gene92254.t1 AT3G43550 31.939 263 168 7 12 269 30 286 4.70e-34 127
MS.gene92254.t1 AT5G33370 32.075 265 169 6 12 269 30 290 8.40e-34 127
MS.gene92254.t1 AT5G15720 28.671 286 191 5 64 336 48 333 8.47e-34 127
MS.gene92254.t1 AT1G28580 28.235 340 211 10 8 320 33 366 1.49e-33 127
MS.gene92254.t1 AT1G28670 29.240 342 206 11 8 320 31 365 3.42e-33 127
MS.gene92254.t1 AT1G28660 29.412 340 206 12 8 320 31 363 1.11e-32 125
MS.gene92254.t1 AT1G28600 28.698 338 203 11 12 320 31 359 2.20e-32 124
MS.gene92254.t1 AT5G14450 29.738 343 197 9 12 320 41 373 5.38e-32 123
MS.gene92254.t1 AT1G28570 27.143 350 214 11 3 320 23 363 6.02e-32 123
MS.gene92254.t1 AT4G01130 31.900 279 155 7 12 269 34 298 1.30e-31 121
MS.gene92254.t1 AT1G31550 28.736 348 204 12 12 330 36 368 1.50e-31 122
MS.gene92254.t1 AT1G67830 29.738 343 199 12 12 320 30 364 2.16e-31 121
MS.gene92254.t1 AT1G28590 27.485 342 211 10 8 320 32 365 3.06e-31 122
MS.gene92254.t1 AT1G75920 29.870 308 177 8 12 315 29 301 5.74e-31 119
MS.gene92254.t1 AT1G75920 31.228 285 184 8 38 315 25 304 6.09e-31 119
MS.gene92254.t1 AT5G03600 30.247 324 196 8 7 319 9 313 1.35e-30 118
MS.gene92254.t1 AT5G03600 30.990 313 186 8 7 308 44 337 1.91e-30 119
MS.gene92254.t1 AT5G45910 30.523 344 201 11 9 320 27 364 1.95e-30 119
MS.gene92254.t1 AT3G48460 28.070 342 197 12 13 321 39 364 2.03e-30 119
MS.gene92254.t1 AT4G16230 37.321 209 119 8 5 204 22 227 3.99e-29 112
MS.gene92254.t1 AT3G27950 30.473 338 200 10 12 323 32 360 5.36e-29 115
MS.gene92254.t1 AT2G24560 30.258 271 176 8 12 273 34 300 5.65e-29 114
MS.gene92254.t1 AT3G62280 27.864 323 213 6 9 317 33 349 1.39e-28 114
MS.gene92254.t1 AT1G09390 29.102 323 199 8 12 314 37 349 1.40e-28 114
MS.gene92254.t1 AT1G54790 27.500 360 203 11 2 320 21 363 1.63e-28 114
MS.gene92254.t1 AT1G54020 28.782 271 168 9 73 334 7 261 1.69e-28 112
MS.gene92254.t1 AT1G54020 28.782 271 168 9 73 334 7 261 1.69e-28 112
MS.gene92254.t1 AT1G54020 28.782 271 168 9 73 334 7 261 1.69e-28 112
MS.gene92254.t1 AT3G05180 27.954 347 208 11 12 325 36 373 4.11e-28 112
MS.gene92254.t1 AT1G31550 27.666 347 206 12 12 330 36 365 1.23e-27 111
MS.gene92254.t1 AT1G56670 27.523 327 199 8 12 314 40 352 1.38e-27 111
MS.gene92254.t1 AT1G28610 26.225 347 214 12 12 330 31 363 1.54e-27 111
MS.gene92254.t1 AT2G04020 36.190 210 104 9 12 206 43 237 3.50e-27 107
MS.gene92254.t1 AT2G04020 35.714 210 105 8 12 206 43 237 1.14e-26 107
MS.gene92254.t1 AT4G01130 28.328 293 168 8 70 327 1 286 2.14e-26 106
MS.gene92254.t1 AT1G54020 29.524 210 134 5 134 334 8 212 1.85e-25 102
MS.gene92254.t1 AT3G14210 31.905 210 128 6 136 333 22 228 2.39e-25 103
MS.gene92254.t1 AT1G53970 59.211 76 31 0 6 81 14 89 1.95e-24 95.9
MS.gene92254.t1 AT1G53970 59.211 76 31 0 6 81 14 89 1.95e-24 95.9
MS.gene92254.t1 AT1G54790 25.648 386 203 12 2 320 21 389 2.64e-23 100
MS.gene92254.t1 AT2G31550 29.756 205 124 6 114 307 4 199 1.23e-21 92.0
MS.gene92254.t1 AT3G62280 28.839 267 175 6 9 271 33 288 7.14e-21 91.7
MS.gene92254.t1 AT1G56670 27.273 275 166 8 12 269 40 297 2.37e-19 87.4
MS.gene92254.t1 AT1G28580 26.056 284 178 9 63 320 8 285 9.02e-19 85.9
MS.gene92254.t1 AT2G36325 28.972 321 184 14 9 308 44 341 3.33e-18 84.7
MS.gene92254.t1 AT1G28600 36.054 147 77 6 16 150 35 176 1.40e-17 80.9
MS.gene92254.t1 AT4G16233 31.200 125 76 2 217 333 5 127 1.56e-16 75.5
MS.gene92254.t1 AT5G03590 26.389 288 154 8 41 317 11 251 3.96e-16 77.4
MS.gene92254.t1 AT1G28610 41.573 89 47 2 16 101 35 121 1.72e-13 69.7

Find 66 sgRNAs with CRISPR-Local

Find 121 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATTTGGGTTGCTTAATT+TGG 0.083505 8.2:+73215870 MS.gene92254:CDS
GACCTAGGTGGAAGAAAATT+TGG 0.128289 8.2:+73215856 MS.gene92254:CDS
GAATTTATTCAAGGAGAAAT+TGG 0.181342 8.2:+73215565 MS.gene92254:CDS
CATGGTGCACTATTCATATT+TGG 0.201400 8.2:+73214329 MS.gene92254:CDS
ATTTCCATTCCATATCAATT+TGG 0.257049 8.2:-73216338 None:intergenic
AATATTTCGCCAAATTGATA+TGG 0.273243 8.2:+73216329 MS.gene92254:CDS
TTGCTTAATTTGGGTCCTTT+TGG 0.281909 8.2:+73215880 MS.gene92254:CDS
GGAGATTCACTATTTGATAA+TGG 0.318592 8.2:+73214350 MS.gene92254:CDS
TTAACTCCATAGATATATTC+AGG 0.319254 8.2:-73215334 None:intergenic
CAATTTGTTGATATTGTCAT+TGG 0.319994 8.2:+73215707 MS.gene92254:CDS
CAATGACTATGGTAGTCTTC+TGG 0.327833 8.2:+73215646 MS.gene92254:CDS
AATAGCTGCTTTAGATTGTA+AGG 0.329509 8.2:-73216376 None:intergenic
CAATACAAGCATTGGTAATC+AGG 0.334657 8.2:+73214388 MS.gene92254:CDS
AAATTTGGGTTGCTTAATTT+GGG 0.339152 8.2:+73215871 MS.gene92254:CDS
AATAGTGCACCATGTTTCTT+AGG 0.357221 8.2:-73214320 None:intergenic
ACTAAATAAGTATACAGATT+TGG 0.363697 8.2:-73215615 None:intergenic
GGGTGACCTGGATGCAAATA+TGG 0.373892 8.2:-73215313 None:intergenic
CTATCCTAGCATAAGAATAT+TGG 0.377524 8.2:+73215906 MS.gene92254:CDS
GGTAGAAGAACACCAGAGTT+TGG 0.379836 8.2:-73215671 None:intergenic
ATAAGAATATTGGTTAATAA+TGG 0.401415 8.2:+73215916 MS.gene92254:CDS
ATGAAGTATCCTTCAAACTA+TGG 0.406479 8.2:+73216084 MS.gene92254:CDS
ACCTAGGTGGAAGAAAATTT+GGG 0.409923 8.2:+73215857 MS.gene92254:CDS
ACAAATTGTTGATGATCAAC+AGG 0.420612 8.2:-73215692 None:intergenic
AAAATCGTACCAACAAAATC+TGG 0.421278 8.2:-73214482 None:intergenic
ACTTTCTTTAAGTACCCTTC+TGG 0.425473 8.2:+73214434 MS.gene92254:CDS
AATATTTGAATCCCTTTAGC+TGG 0.426031 8.2:-73216026 None:intergenic
GGTCACCCTGAATATATCTA+TGG 0.427944 8.2:+73215328 MS.gene92254:CDS
AATTTATTCAAGGAGAAATT+GGG 0.433733 8.2:+73215566 MS.gene92254:CDS
TTAACCAATATTCTTATGCT+AGG 0.460332 8.2:-73215910 None:intergenic
TCTGTATACTTATTTAGTGT+TGG 0.466966 8.2:+73215620 MS.gene92254:CDS
AAAGGTAAAGAATTTATTCA+AGG 0.471906 8.2:+73215556 MS.gene92254:CDS
AAATTGATATGGAATGGAAA+TGG 0.479120 8.2:+73216340 MS.gene92254:CDS
GCATGTTGTGGAAGTGGCTG+TGG 0.481080 8.2:+73216223 MS.gene92254:CDS
TTCGCCAAATTGATATGGAA+TGG 0.491966 8.2:+73216334 MS.gene92254:CDS
GAAGTTAGAGAACCAGCTAA+AGG 0.492941 8.2:+73216014 MS.gene92254:CDS
AACTACATCAATACAAGCAT+TGG 0.493799 8.2:+73214380 MS.gene92254:CDS
AGTGTTGGAAGCAATGACTA+TGG 0.497856 8.2:+73215635 MS.gene92254:CDS
AAGTTAGAGAACCAGCTAAA+GGG 0.499318 8.2:+73216015 MS.gene92254:CDS
TATTGATTAGCTTTCTCTGT+AGG 0.500420 8.2:-73216310 None:intergenic
CAGGCAAATTATCCTCCCTA+TGG 0.501668 8.2:+73214407 MS.gene92254:CDS
TGCAAATATGGTGGAAGTAG+AGG 0.513679 8.2:-73215301 None:intergenic
TTATAGGAAATTTATGACCT+AGG 0.517577 8.2:+73215841 MS.gene92254:intron
TTAAAGAAAGTCTGTCCATA+GGG 0.522108 8.2:-73214422 None:intergenic
GAATGTGTACCATAGTTTGA+AGG 0.527964 8.2:-73216093 None:intergenic
CTTCCACCATATTTGCATCC+AGG 0.531243 8.2:+73215307 MS.gene92254:CDS
TTGGTTAATAATGGAACAGA+AGG 0.533866 8.2:+73215925 MS.gene92254:CDS
AGTCTTCTGGATCCAAACTC+TGG 0.534866 8.2:+73215659 MS.gene92254:CDS
CTTAAAGAAAGTCTGTCCAT+AGG 0.538225 8.2:-73214423 None:intergenic
GCACTCTCTCAAACATCTCA+AGG 0.540073 8.2:+73215379 MS.gene92254:CDS
TGGTGGAAGTAGAGGCAACT+TGG 0.541652 8.2:-73215293 None:intergenic
ATGCTAGGATAGCAGCCAAA+AGG 0.547875 8.2:-73215895 None:intergenic
GAAGCAAGTGTAGCATGTTG+TGG 0.548799 8.2:+73216211 MS.gene92254:CDS
TAGATATATTCAGGGTGACC+TGG 0.550497 8.2:-73215325 None:intergenic
TAACTCCATAGATATATTCA+GGG 0.561814 8.2:-73215333 None:intergenic
AGTGTAGCATGTTGTGGAAG+TGG 0.577374 8.2:+73216217 MS.gene92254:CDS
CATAGATGAAATTTCAGCAG+TGG 0.592459 8.2:+73215954 MS.gene92254:CDS
CCGTCAGAAAATCTACCAGA+AGG 0.595079 8.2:-73214449 None:intergenic
TGTTGTGGAAGTGGCTGTGG+AGG 0.606060 8.2:+73216226 MS.gene92254:CDS
ATACTTTGATGACATTTGTG+AGG 0.609808 8.2:-73215733 None:intergenic
CGTCAGAAAATCTACCAGAA+GGG 0.641192 8.2:-73214448 None:intergenic
TAGGAAATTTATGACCTAGG+TGG 0.647961 8.2:+73215844 MS.gene92254:intron
AAGAAAGTCTGTCCATAGGG+AGG 0.658983 8.2:-73214419 None:intergenic
GTTGTGGAAGTGGCTGTGGA+GGG 0.661412 8.2:+73216227 MS.gene92254:CDS
ATGGAAATGGCAGTGTCACA+TGG 0.664922 8.2:+73216353 MS.gene92254:CDS
AATTGCTTGCCTAAGAAACA+TGG 0.674205 8.2:+73214311 MS.gene92254:CDS
TGACCTGGATGCAAATATGG+TGG 0.680616 8.2:-73215310 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATGATATGTTTATTTAT+AGG + chr8.2:73215825-73215844 MS.gene92254:intron 10.0%
!!! AAAAAGTTAACTTTTTTTAA+AGG - chr8.2:73214901-73214920 None:intergenic 10.0%
!!! ACATATGTTTATTTTTTTTT+AGG + chr8.2:73214525-73214544 MS.gene92254:intron 10.0%
!!! ATATGTTTATTTTTTTTTAG+GGG + chr8.2:73214527-73214546 MS.gene92254:intron 10.0%
!!! ATGTTTTGAAAAAAAAAAAT+TGG - chr8.2:73214509-73214528 None:intergenic 10.0%
!!! CATATGTTTATTTTTTTTTA+GGG + chr8.2:73214526-73214545 MS.gene92254:intron 10.0%
!!! TTTATGTTTGATAAATTTTT+GGG + chr8.2:73216177-73216196 MS.gene92254:intron 10.0%
!!! TTTTATGTTTGATAAATTTT+TGG + chr8.2:73216176-73216195 MS.gene92254:intron 10.0%
!! ATAGATTCAAATTAATTGTT+AGG + chr8.2:73214584-73214603 MS.gene92254:intron 15.0%
!!! AAAAAAGTTAACTTTTTATC+CGG + chr8.2:73214904-73214923 MS.gene92254:intron 15.0%
!!! AAATATAGTTTTCATTTTAG+AGG - chr8.2:73215447-73215466 None:intergenic 15.0%
!!! ATAAGAATATTGGTTAATAA+TGG + chr8.2:73215916-73215935 MS.gene92254:CDS 15.0%
!! AAAGGTAAAGAATTTATTCA+AGG + chr8.2:73215556-73215575 MS.gene92254:CDS 20.0%
!! AATTTATTCAAGGAGAAATT+GGG + chr8.2:73215566-73215585 MS.gene92254:CDS 20.0%
!! ACTAAATAAGTATACAGATT+TGG - chr8.2:73215618-73215637 None:intergenic 20.0%
!! TCAGTTGAGTTATTTAAAAA+AGG + chr8.2:73215538-73215557 MS.gene92254:CDS 20.0%
!!! AAAAAGTTAACTTTTTATCC+GGG + chr8.2:73214905-73214924 MS.gene92254:intron 20.0%
!!! AAGTTAACTTTTTTTAAAGG+AGG - chr8.2:73214898-73214917 None:intergenic 20.0%
!!! TTTTGTTTTCTTAGAAATCA+AGG - chr8.2:73215233-73215252 None:intergenic 20.0%
! AAATTGATATGGAATGGAAA+TGG + chr8.2:73216340-73216359 MS.gene92254:CDS 25.0%
! AATATTTCGCCAAATTGATA+TGG + chr8.2:73216329-73216348 MS.gene92254:CDS 25.0%
! AGAAAAATCATCTTAGACTT+TGG - chr8.2:73214737-73214756 None:intergenic 25.0%
! ATTTCCATTCCATATCAATT+TGG - chr8.2:73216341-73216360 None:intergenic 25.0%
! GAAAAATCATCTTAGACTTT+GGG - chr8.2:73214736-73214755 None:intergenic 25.0%
! GAATTTATTCAAGGAGAAAT+TGG + chr8.2:73215565-73215584 MS.gene92254:CDS 25.0%
! TAACTCCATAGATATATTCA+GGG - chr8.2:73215336-73215355 None:intergenic 25.0%
! TCTGTATACTTATTTAGTGT+TGG + chr8.2:73215620-73215639 MS.gene92254:CDS 25.0%
! TTAACCAATATTCTTATGCT+AGG - chr8.2:73215913-73215932 None:intergenic 25.0%
! TTAACTCCATAGATATATTC+AGG - chr8.2:73215337-73215356 None:intergenic 25.0%
! TTATAGGAAATTTATGACCT+AGG + chr8.2:73215841-73215860 MS.gene92254:intron 25.0%
! TTGTAACACTCTAATCAAAA+TGG - chr8.2:73215025-73215044 None:intergenic 25.0%
! TTGTTAGCACAAAAAAATCA+AGG - chr8.2:73215774-73215793 None:intergenic 25.0%
!! TTCGATTGTTGTTAACATAT+AGG + chr8.2:73215499-73215518 MS.gene92254:intron 25.0%
!!! AAAATTTGGGTTGCTTAATT+TGG + chr8.2:73215870-73215889 MS.gene92254:CDS 25.0%
!!! AAATTTGGGTTGCTTAATTT+GGG + chr8.2:73215871-73215890 MS.gene92254:CDS 25.0%
!!! CAATTTGTTGATATTGTCAT+TGG + chr8.2:73215707-73215726 MS.gene92254:CDS 25.0%
!!! TGTTTGATAAATTTTTGGGA+AGG + chr8.2:73216181-73216200 MS.gene92254:intron 25.0%
AAAATCGTACCAACAAAATC+TGG - chr8.2:73214485-73214504 None:intergenic 30.0%
AACTACATCAATACAAGCAT+TGG + chr8.2:73214380-73214399 MS.gene92254:CDS 30.0%
AATATTTGAATCCCTTTAGC+TGG - chr8.2:73216029-73216048 None:intergenic 30.0%
AATTAATTGTTAGGAGTCTG+AGG + chr8.2:73214593-73214612 MS.gene92254:intron 30.0%
AGAACTCCTAAAAAAAGTGA+CGG - chr8.2:73214766-73214785 None:intergenic 30.0%
ATTAATTGTTAGGAGTCTGA+GGG + chr8.2:73214594-73214613 MS.gene92254:intron 30.0%
CTATCCTAGCATAAGAATAT+TGG + chr8.2:73215906-73215925 MS.gene92254:CDS 30.0%
GGAGATTCACTATTTGATAA+TGG + chr8.2:73214350-73214369 MS.gene92254:CDS 30.0%
GTAATCTCTAGTATATCATG+TGG - chr8.2:73214796-73214815 None:intergenic 30.0%
TGCATGATGTAGTCTAATTA+AGG + chr8.2:73214845-73214864 MS.gene92254:intron 30.0%
TTAAAGAAAGTCTGTCCATA+GGG - chr8.2:73214425-73214444 None:intergenic 30.0%
! AATAACTCAACTGAGTTTTC+AGG - chr8.2:73215532-73215551 None:intergenic 30.0%
! AATAGCTGCTTTAGATTGTA+AGG - chr8.2:73216379-73216398 None:intergenic 30.0%
! ATACTTTGATGACATTTGTG+AGG - chr8.2:73215736-73215755 None:intergenic 30.0%
! ATGAAGTATCCTTCAAACTA+TGG + chr8.2:73216084-73216103 MS.gene92254:CDS 30.0%
! TATGGAGTTAATTTTGCATC+AGG + chr8.2:73215346-73215365 MS.gene92254:CDS 30.0%
! TTGGTTAATAATGGAACAGA+AGG + chr8.2:73215925-73215944 MS.gene92254:CDS 30.0%
!! ACAAATTGTTGATGATCAAC+AGG - chr8.2:73215695-73215714 None:intergenic 30.0%
!! TATTGATTAGCTTTCTCTGT+AGG - chr8.2:73216313-73216332 None:intergenic 30.0%
!!! TTCATTCCGTCACTTTTTTT+AGG + chr8.2:73214757-73214776 MS.gene92254:intron 30.0%
AAGTTAGAGAACCAGCTAAA+GGG + chr8.2:73216015-73216034 MS.gene92254:CDS 35.0%
AATAGTGCACCATGTTTCTT+AGG - chr8.2:73214323-73214342 None:intergenic 35.0%
AATTGCTTGCCTAAGAAACA+TGG + chr8.2:73214311-73214330 MS.gene92254:CDS 35.0%
ACCTAGGTGGAAGAAAATTT+GGG + chr8.2:73215857-73215876 MS.gene92254:CDS 35.0%
ACTTTCTTTAAGTACCCTTC+TGG + chr8.2:73214434-73214453 MS.gene92254:CDS 35.0%
ATATCTCGATAACAAGAGAG+AGG + chr8.2:73214643-73214662 MS.gene92254:intron 35.0%
ATCTCTAGTATATCATGTGG+CGG - chr8.2:73214793-73214812 None:intergenic 35.0%
CATAGATGAAATTTCAGCAG+TGG + chr8.2:73215954-73215973 MS.gene92254:CDS 35.0%
CATGGTGCACTATTCATATT+TGG + chr8.2:73214329-73214348 MS.gene92254:CDS 35.0%
CTTAAAGAAAGTCTGTCCAT+AGG - chr8.2:73214426-73214445 None:intergenic 35.0%
GAATGTGTACCATAGTTTGA+AGG - chr8.2:73216096-73216115 None:intergenic 35.0%
GATTGTCAAAAAACCTGAAC+AGG + chr8.2:73215178-73215197 MS.gene92254:intron 35.0%
TAGGAAATTTATGACCTAGG+TGG + chr8.2:73215844-73215863 MS.gene92254:intron 35.0%
TATCTCGATAACAAGAGAGA+GGG + chr8.2:73214644-73214663 MS.gene92254:intron 35.0%
TTCGCCAAATTGATATGGAA+TGG + chr8.2:73216334-73216353 MS.gene92254:CDS 35.0%
! ACACAGTAGTACTAGTCTAT+AGG - chr8.2:73215210-73215229 None:intergenic 35.0%
! ACTTTTTATCCGGGAAATTG+TGG + chr8.2:73214914-73214933 MS.gene92254:intron 35.0%
! GAGTTAATTTTGCATCAGGA+GGG + chr8.2:73215350-73215369 MS.gene92254:CDS 35.0%
! TTAGACTTTGGGAGAATATG+TGG - chr8.2:73214725-73214744 None:intergenic 35.0%
!! CAATACAAGCATTGGTAATC+AGG + chr8.2:73214388-73214407 MS.gene92254:CDS 35.0%
!! TATTGATTCGTTGTTTCTCC+CGG - chr8.2:73214624-73214643 None:intergenic 35.0%
!! TTGCTTAATTTGGGTCCTTT+TGG + chr8.2:73215880-73215899 MS.gene92254:CDS 35.0%
ACATCACTACCACAATTTCC+CGG - chr8.2:73214926-73214945 None:intergenic 40.0%
CAATGACTATGGTAGTCTTC+TGG + chr8.2:73215646-73215665 MS.gene92254:CDS 40.0%
CGTCAGAAAATCTACCAGAA+GGG - chr8.2:73214451-73214470 None:intergenic 40.0%
CTATAGGACAAATCCTGTTC+AGG - chr8.2:73215194-73215213 None:intergenic 40.0%
CTCCATAACCATAAGAGAGA+GGG + chr8.2:73214697-73214716 MS.gene92254:intron 40.0%
GAAGTTAGAGAACCAGCTAA+AGG + chr8.2:73216014-73216033 MS.gene92254:CDS 40.0%
GACCTAGGTGGAAGAAAATT+TGG + chr8.2:73215856-73215875 MS.gene92254:CDS 40.0%
GGTCACCCTGAATATATCTA+TGG + chr8.2:73215328-73215347 MS.gene92254:CDS 40.0%
TAGATATATTCAGGGTGACC+TGG - chr8.2:73215328-73215347 None:intergenic 40.0%
! ACCCAAATTTTCTTCCACCT+AGG - chr8.2:73215861-73215880 None:intergenic 40.0%
! AGTGTTGGAAGCAATGACTA+TGG + chr8.2:73215635-73215654 MS.gene92254:CDS 40.0%
! CCTTCTGGTAGATTTTCTGA+CGG + chr8.2:73214449-73214468 MS.gene92254:CDS 40.0%
! CGCATGATACCAGATTTTGT+TGG + chr8.2:73214473-73214492 MS.gene92254:CDS 40.0%
! GGAGTTAATTTTGCATCAGG+AGG + chr8.2:73215349-73215368 MS.gene92254:CDS 40.0%
! TGCAAATATGGTGGAAGTAG+AGG - chr8.2:73215304-73215323 None:intergenic 40.0%
AAGAAAGTCTGTCCATAGGG+AGG - chr8.2:73214422-73214441 None:intergenic 45.0%
AGTCTTCTGGATCCAAACTC+TGG + chr8.2:73215659-73215678 MS.gene92254:CDS 45.0%
AGTGTAGCATGTTGTGGAAG+TGG + chr8.2:73216217-73216236 MS.gene92254:CDS 45.0%
ATGCTAGGATAGCAGCCAAA+AGG - chr8.2:73215898-73215917 None:intergenic 45.0%
ATGGAAATGGCAGTGTCACA+TGG + chr8.2:73216353-73216372 MS.gene92254:CDS 45.0%
CACATGATGTTGTCGAGTGA+CGG + chr8.2:73214984-73215003 MS.gene92254:intron 45.0%
CAGGCAAATTATCCTCCCTA+TGG + chr8.2:73214407-73214426 MS.gene92254:CDS 45.0%
CCGTCAGAAAATCTACCAGA+AGG - chr8.2:73214452-73214471 None:intergenic 45.0%
CTTCCACCATATTTGCATCC+AGG + chr8.2:73215307-73215326 MS.gene92254:CDS 45.0%
GAAGCAAGTGTAGCATGTTG+TGG + chr8.2:73216211-73216230 MS.gene92254:CDS 45.0%
GCACTCTCTCAAACATCTCA+AGG + chr8.2:73215379-73215398 MS.gene92254:CDS 45.0%
GCTCCATAACCATAAGAGAG+AGG + chr8.2:73214696-73214715 MS.gene92254:intron 45.0%
GGTAGAAGAACACCAGAGTT+TGG - chr8.2:73215674-73215693 None:intergenic 45.0%
TGACCTGGATGCAAATATGG+TGG - chr8.2:73215313-73215332 None:intergenic 45.0%
! AATTTTGCATCAGGAGGGTC+TGG + chr8.2:73215355-73215374 MS.gene92254:CDS 45.0%
! GAGTGACGGAACTTAGCAAA+GGG + chr8.2:73214998-73215017 MS.gene92254:intron 45.0%
CGCCCTCTCTCTTATGGTTA+TGG - chr8.2:73214702-73214721 None:intergenic 50.0%
CGTCACTCGACAACATCATG+TGG - chr8.2:73214986-73215005 None:intergenic 50.0%
GGGTGACCTGGATGCAAATA+TGG - chr8.2:73215316-73215335 None:intergenic 50.0%
TGGTGGAAGTAGAGGCAACT+TGG - chr8.2:73215296-73215315 None:intergenic 50.0%
TTAGGAGTCTGAGGGAGTTC+CGG + chr8.2:73214602-73214621 MS.gene92254:intron 50.0%
! CGAGTGACGGAACTTAGCAA+AGG + chr8.2:73214997-73215016 MS.gene92254:intron 50.0%
ATGTGGCGCCCTCTCTCTTA+TGG - chr8.2:73214708-73214727 None:intergenic 55.0%
GCATGTTGTGGAAGTGGCTG+TGG + chr8.2:73216223-73216242 MS.gene92254:CDS 55.0%
GTTGTGGAAGTGGCTGTGGA+GGG + chr8.2:73216227-73216246 MS.gene92254:CDS 55.0%
TAGGAGTCTGAGGGAGTTCC+GGG + chr8.2:73214603-73214622 MS.gene92254:intron 55.0%
TGTTGTGGAAGTGGCTGTGG+AGG + chr8.2:73216226-73216245 MS.gene92254:CDS 55.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 73214302 73216408 73214302 ID=MS.gene92254
chr8.2 mRNA 73214302 73216408 73214302 ID=MS.gene92254.t1;Parent=MS.gene92254
chr8.2 exon 73214302 73214494 73214302 ID=MS.gene92254.t1.exon1;Parent=MS.gene92254.t1
chr8.2 CDS 73214302 73214494 73214302 ID=cds.MS.gene92254.t1;Parent=MS.gene92254.t1
chr8.2 exon 73215284 73215405 73215284 ID=MS.gene92254.t1.exon2;Parent=MS.gene92254.t1
chr8.2 CDS 73215284 73215405 73215284 ID=cds.MS.gene92254.t1;Parent=MS.gene92254.t1
chr8.2 exon 73215521 73215751 73215521 ID=MS.gene92254.t1.exon3;Parent=MS.gene92254.t1
chr8.2 CDS 73215521 73215751 73215521 ID=cds.MS.gene92254.t1;Parent=MS.gene92254.t1
chr8.2 exon 73215847 73216105 73215847 ID=MS.gene92254.t1.exon4;Parent=MS.gene92254.t1
chr8.2 CDS 73215847 73216105 73215847 ID=cds.MS.gene92254.t1;Parent=MS.gene92254.t1
chr8.2 exon 73216203 73216408 73216203 ID=MS.gene92254.t1.exon5;Parent=MS.gene92254.t1
chr8.2 CDS 73216203 73216408 73216203 ID=cds.MS.gene92254.t1;Parent=MS.gene92254.t1
Gene Sequence

>MS.gene92254

ATGATCATGAATTGCTTGCCTAAGAAACATGGTGCACTATTCATATTTGGAGATTCACTATTTGATAATGGTAACAACAACTACATCAATACAAGCATTGGTAATCAGGCAAATTATCCTCCCTATGGACAGACTTTCTTTAAGTACCCTTCTGGTAGATTTTCTGACGGACGCATGATACCAGATTTTGTTGGTACGATTTTTCCAATTTTTTTTTTTCAAAACATATGTTTATTTTTTTTTAGGGGAAAACATATGTTTATTTTATTGTGTAGTTAGTATATAGATTCAAATTAATTGTTAGGAGTCTGAGGGAGTTCCGGGAGAAACAACGAATCAATATATCTCGATAACAAGAGAGAGGGAGAGAGATAACACATCTCTACTCAATTTTGCTCCATAACCATAAGAGAGAGGGCGCCACATATTCTCCCAAAGTCTAAGATGATTTTTCTTTCATTCCGTCACTTTTTTTAGGAGTTCTCATTCCGCCACATGATATACTAGAGATTACATAGATTGTTACATTTTCATTTAACGTGTTGCATGATGTAGTCTAATTAAGGAACTTAGCTATGACATTAACTTTTTATCCTCCTTTAAAAAAAGTTAACTTTTTATCCGGGAAATTGTGGTAGTGATGTAGAGATTACTTAGATTGTAACATTTTCATTTAACGTACCACATGATGTTGTCGAGTGACGGAACTTAGCAAAGGGACCATTTTGATTAGAGTGTTACAATGTTGTAGACAAGATTGTTAATTCGTAAAAGTGAAAAACGAATTTAACTGACATTTATCATTTCAAGAAAAAAGAAAATACAAATAAATTTCGTCGCTAAATTTAGCTATGAGAAACAACATATGCACTATATGATTGTCAAAAAACCTGAACAGGATTTGTCCTATAGACTAGTACTACTGTGTCCTTGATTTCTAAGAAAACAAAAACATAACAAAATAGTTGTCTAATTTTTTCAGCTGAGTATGCCAAGTTGCCTCTACTTCCACCATATTTGCATCCAGGTCACCCTGAATATATCTATGGAGTTAATTTTGCATCAGGAGGGTCTGGTGCACTCTCTCAAACATCTCAAGGAAGTGTAAGCTCATCTTTAAATTCATTGAATATCTTTTTCTACCTCTAAAATGAAAACTATATTTATAGTATATACTAATATAAACATTATCTGAACTTCGATTGTTGTTAACATATAGGTGATAGACCTGAAAACTCAGTTGAGTTATTTAAAAAAGGTAAAGAATTTATTCAAGGAGAAATTGGGACATGAAAAAACAAAAGAATTGTTGTCCAAATCTGTATACTTATTTAGTGTTGGAAGCAATGACTATGGTAGTCTTCTGGATCCAAACTCTGGTGTTCTTCTACCTGTTGATCATCAACAATTTGTTGATATTGTCATTGGAAACCTCACAAATGTCATCAAAGTATGTAAAGTTTTATAAGCCTTGATTTTTTTGTGCTAACAATAGATATGATATTAATTTTGTGCTAACAATATATATGATATGTTTATTTATAGGAAATTTATGACCTAGGTGGAAGAAAATTTGGGTTGCTTAATTTGGGTCCTTTTGGCTGCTATCCTAGCATAAGAATATTGGTTAATAATGGAACAGAAGGTGAATGCATAGATGAAATTTCAGCAGTGGCAAGACTACACAACAATAAACTAACAAAAATGATTCAGAAGTTAGAGAACCAGCTAAAGGGATTCAAATATTCAATCAATGATTTCTACAGTGCATTTTCTGAAGTGATGAAGTATCCTTCAAACTATGGTACACATTCATGAAAAATATTATTATGTAGTGAGTTTTATGTGTGAGCATATATACTAATCATTGTTAATTTTATGTTTGATAAATTTTTGGGAAGGCTTTAAAGAAGCAAGTGTAGCATGTTGTGGAAGTGGCTGTGGAGGGAACAAAGAATATGAGTTATGTGACAATGTGAATGAACATGTATTCTTTGACACTCATCATCCTACAGAGAAAGCTAATCAATATTTCGCCAAATTGATATGGAATGGAAATGGCAGTGTCACATGGCCTTACAATCTAAAGCAGCTATTTGAAATTTGA
Protein sequence

>MS.gene92254.t1

MIMNCLPKKHGALFIFGDSLFDNGNNNYINTSIGNQANYPPYGQTFFKYPSGRFSDGRMIPDFVAEYAKLPLLPPYLHPGHPEYIYGVNFASGGSGALSQTSQGSVIDLKTQLSYLKKVKNLFKEKLGHEKTKELLSKSVYLFSVGSNDYGSLLDPNSGVLLPVDHQQFVDIVIGNLTNVIKEIYDLGGRKFGLLNLGPFGCYPSIRILVNNGTEGECIDEISAVARLHNNKLTKMIQKLENQLKGFKYSINDFYSAFSEVMKYPSNYGFKEASVACCGSGCGGNKEYELCDNVNEHVFFDTHHPTEKANQYFAKLIWNGNGSVTWPYNLKQLFEI