AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene046353

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene046353.t1 MTR_8g022790 97.917 336 7 0 1 336 26 361 0.0 679
MS.gene046353.t1 MTR_8g031420 56.891 341 131 4 5 335 28 362 1.49e-139 400
MS.gene046353.t1 MTR_8g031430 56.891 341 131 4 5 335 30 364 2.23e-136 392
MS.gene046353.t1 MTR_8g031390 55.621 338 133 5 5 332 30 360 8.85e-129 373
MS.gene046353.t1 MTR_8g031400 53.372 341 143 4 5 335 30 364 2.66e-128 371
MS.gene046353.t1 MTR_8g022810 50.000 340 157 4 8 335 37 375 2.12e-114 337
MS.gene046353.t1 MTR_8g031390 56.897 290 111 4 5 287 30 312 2.15e-111 327
MS.gene046353.t1 MTR_2g044100 50.898 334 152 4 12 334 43 375 1.99e-109 324
MS.gene046353.t1 MTR_8g022810 43.824 340 125 5 8 335 37 322 3.99e-87 265
MS.gene046353.t1 MTR_3g005650 34.835 333 204 5 12 336 30 357 8.37e-59 193
MS.gene046353.t1 MTR_8g075230 36.025 322 186 8 12 319 36 351 2.29e-56 187
MS.gene046353.t1 MTR_5g022630 33.750 320 198 7 12 319 43 360 3.35e-56 187
MS.gene046353.t1 MTR_5g093090 33.432 338 203 7 12 333 28 359 6.36e-56 186
MS.gene046353.t1 MTR_8g079050 34.682 346 201 11 11 336 36 376 7.39e-56 186
MS.gene046353.t1 MTR_8g074570 34.682 346 196 10 8 333 34 369 3.12e-55 184
MS.gene046353.t1 MTR_8g014910 35.168 327 196 8 12 325 32 355 3.95e-55 184
MS.gene046353.t1 MTR_2g033930 33.918 342 197 10 12 335 32 362 4.88e-54 181
MS.gene046353.t1 MTR_1g079530 34.402 343 191 13 12 336 29 355 8.07e-54 181
MS.gene046353.t1 MTR_3g052490 33.621 348 203 10 8 336 28 366 1.07e-53 180
MS.gene046353.t1 MTR_7g116520 32.448 339 209 8 12 336 34 366 5.67e-53 179
MS.gene046353.t1 MTR_3g082830 35.535 318 183 10 12 314 38 348 1.59e-52 177
MS.gene046353.t1 MTR_2g033920 33.529 340 209 9 9 335 32 367 3.57e-52 176
MS.gene046353.t1 MTR_3g464730 34.579 321 189 10 9 314 25 339 4.03e-52 176
MS.gene046353.t1 MTR_3g052480 33.333 351 201 10 8 336 29 368 1.15e-51 175
MS.gene046353.t1 MTR_5g084770 33.441 311 194 6 12 311 28 336 1.59e-51 174
MS.gene046353.t1 MTR_2g461580 32.432 333 198 8 12 333 31 347 1.96e-51 174
MS.gene046353.t1 MTR_8g074580 31.865 386 194 11 8 333 40 416 5.00e-51 175
MS.gene046353.t1 MTR_1g069175 31.594 345 206 12 12 336 33 367 8.41e-51 173
MS.gene046353.t1 MTR_2g084585 34.076 314 193 6 12 314 30 340 1.02e-50 172
MS.gene046353.t1 MTR_5g084790 35.780 327 194 8 3 317 23 345 1.25e-50 172
MS.gene046353.t1 MTR_5g022640 32.500 320 201 7 12 319 43 359 1.28e-50 172
MS.gene046353.t1 MTR_7g116570 31.176 340 218 7 9 336 31 366 1.72e-50 172
MS.gene046353.t1 MTR_4g087985 33.846 325 182 11 9 309 33 348 4.24e-50 171
MS.gene046353.t1 MTR_2g100620 33.851 322 197 8 12 320 31 349 5.12e-50 170
MS.gene046353.t1 MTR_4g122200 32.749 342 203 11 12 335 35 367 9.15e-50 170
MS.gene046353.t1 MTR_3g052580 31.214 346 213 9 8 336 24 361 3.35e-49 169
MS.gene046353.t1 MTR_3g435540 33.227 313 193 7 14 314 25 333 3.74e-49 168
MS.gene046353.t1 MTR_4g056160 36.164 318 184 8 12 314 27 340 5.08e-49 167
MS.gene046353.t1 MTR_3g052580 31.214 346 213 9 8 336 23 360 5.87e-49 169
MS.gene046353.t1 MTR_4g035353 30.372 349 225 8 1 336 20 363 8.17e-49 167
MS.gene046353.t1 MTR_5g078210 33.439 314 191 9 14 315 27 334 8.47e-49 167
MS.gene046353.t1 MTR_3g021460 32.831 332 198 8 12 333 31 347 9.17e-49 167
MS.gene046353.t1 MTR_5g084750 33.025 324 198 10 1 310 18 336 1.01e-48 167
MS.gene046353.t1 MTR_3g098270 33.432 338 208 7 12 335 34 368 1.19e-48 167
MS.gene046353.t1 MTR_1g024890 31.563 339 212 8 12 336 32 364 1.58e-48 167
MS.gene046353.t1 MTR_5g074270 33.540 322 200 7 6 315 27 346 1.64e-48 167
MS.gene046353.t1 MTR_1g025760 35.161 310 181 11 12 307 80 383 2.45e-48 167
MS.gene046353.t1 MTR_7g116510 30.172 348 224 8 3 336 16 358 1.15e-47 164
MS.gene046353.t1 MTR_3g024510 32.537 335 210 9 14 336 40 370 1.15e-47 165
MS.gene046353.t1 MTR_2g017925 35.329 334 194 11 12 335 33 354 1.54e-47 164
MS.gene046353.t1 MTR_7g008060 32.344 337 201 10 9 334 30 350 2.58e-47 163
MS.gene046353.t1 MTR_0565s0010 31.858 339 208 11 14 336 34 365 3.89e-47 163
MS.gene046353.t1 MTR_0009s0250 34.062 320 182 11 8 314 29 332 4.18e-47 162
MS.gene046353.t1 MTR_4g108690 32.268 313 196 7 14 314 29 337 7.38e-47 162
MS.gene046353.t1 MTR_1g079540 31.105 344 215 9 7 336 28 363 8.45e-47 162
MS.gene046353.t1 MTR_2g015080 33.742 326 189 10 6 309 32 352 9.33e-47 162
MS.gene046353.t1 MTR_3g114090 34.091 308 191 8 12 309 36 341 9.52e-47 162
MS.gene046353.t1 MTR_1g025780 34.839 310 184 9 12 309 41 344 1.04e-46 162
MS.gene046353.t1 MTR_7g116500 30.588 340 210 9 12 334 33 363 3.04e-46 161
MS.gene046353.t1 MTR_1g025680 34.839 310 186 9 12 309 34 339 4.47e-46 162
MS.gene046353.t1 MTR_6g021530 30.357 336 217 7 14 336 31 362 2.49e-45 158
MS.gene046353.t1 MTR_4g056280 35.048 311 188 6 12 311 30 337 3.10e-45 158
MS.gene046353.t1 MTR_1g025720 31.861 317 199 9 12 316 37 348 9.39e-44 154
MS.gene046353.t1 MTR_5g009100 32.544 338 201 13 14 333 48 376 1.43e-43 154
MS.gene046353.t1 MTR_8g075220 29.755 326 206 9 12 319 40 360 1.92e-43 153
MS.gene046353.t1 MTR_4g019880 30.029 343 214 10 12 336 32 366 5.26e-43 152
MS.gene046353.t1 MTR_7g116870 32.000 350 183 11 12 323 33 365 6.44e-43 152
MS.gene046353.t1 MTR_1g025700 32.792 308 194 8 12 309 50 354 6.77e-43 152
MS.gene046353.t1 MTR_2g017955 33.828 337 200 12 12 335 33 359 8.46e-43 152
MS.gene046353.t1 MTR_3g023220 32.335 334 202 10 12 335 33 352 1.03e-42 151
MS.gene046353.t1 MTR_8g074560 30.769 351 208 12 9 335 28 367 1.60e-42 151
MS.gene046353.t1 MTR_8g087870 31.737 334 208 9 12 336 29 351 3.05e-42 150
MS.gene046353.t1 MTR_3g114120 32.390 318 198 8 12 317 47 359 8.91e-42 149
MS.gene046353.t1 MTR_8g028160 31.302 361 198 9 13 336 37 384 2.55e-41 148
MS.gene046353.t1 MTR_8g075200 29.022 317 211 7 12 317 41 354 4.78e-41 148
MS.gene046353.t1 MTR_8g087890 30.205 341 210 11 14 336 33 363 6.93e-41 147
MS.gene046353.t1 MTR_1g025910 29.412 306 200 8 17 311 41 341 2.27e-40 145
MS.gene046353.t1 MTR_2g017875 31.085 341 206 12 12 336 34 361 1.05e-39 143
MS.gene046353.t1 MTR_3g005660 29.464 336 217 9 13 333 37 367 4.63e-38 139
MS.gene046353.t1 MTR_2g017965 30.178 338 210 11 13 335 34 360 1.64e-37 138
MS.gene046353.t1 MTR_7g033155 28.493 365 204 8 7 323 33 388 2.30e-37 138
MS.gene046353.t1 MTR_5g093090 32.714 269 164 6 12 269 28 290 2.43e-37 136
MS.gene046353.t1 MTR_7g087190 31.988 347 193 11 12 323 43 381 6.64e-37 137
MS.gene046353.t1 MTR_2g015590 30.769 338 201 10 10 320 29 360 2.11e-36 135
MS.gene046353.t1 MTR_2g033920 34.328 268 165 8 9 269 32 295 2.19e-36 134
MS.gene046353.t1 MTR_1g030220 31.897 348 182 10 12 320 40 371 3.02e-36 135
MS.gene046353.t1 MTR_5g078210 32.443 262 167 7 14 269 27 284 7.41e-36 132
MS.gene046353.t1 MTR_8g089805 30.058 346 194 10 12 320 40 374 1.04e-35 134
MS.gene046353.t1 MTR_7g113860 29.714 350 188 10 12 320 29 361 2.17e-35 132
MS.gene046353.t1 MTR_7g111780 30.488 328 199 9 8 317 32 348 1.41e-34 130
MS.gene046353.t1 MTR_1g030275 29.912 341 196 8 12 320 39 368 3.05e-34 129
MS.gene046353.t1 MTR_5g083040 29.560 318 201 10 9 308 29 341 3.32e-34 129
MS.gene046353.t1 MTR_7g104220 34.185 313 167 16 13 307 43 334 4.22e-34 128
MS.gene046353.t1 MTR_7g113860 29.429 350 189 11 12 320 35 367 8.99e-34 128
MS.gene046353.t1 MTR_1g092750 28.571 329 198 9 13 324 41 349 2.23e-33 126
MS.gene046353.t1 MTR_7g033150 27.809 356 197 9 12 323 35 374 2.27e-33 127
MS.gene046353.t1 MTR_1g030268 31.778 343 187 11 12 320 40 369 3.18e-33 127
MS.gene046353.t1 MTR_1g092690 28.923 325 184 11 8 307 39 341 2.12e-32 124
MS.gene046353.t1 MTR_2g015630 29.565 345 203 11 17 333 36 368 3.56e-32 124
MS.gene046353.t1 MTR_2g017915 29.377 337 192 11 13 335 34 338 7.24e-32 122
MS.gene046353.t1 MTR_1g030230 30.029 343 195 9 12 320 32 363 2.36e-31 121
MS.gene046353.t1 MTR_1g082390 28.691 359 211 11 1 325 20 367 3.43e-31 121
MS.gene046353.t1 MTR_2g087292 29.808 312 139 9 7 314 28 263 3.47e-31 119
MS.gene046353.t1 MTR_2g015650 28.693 352 215 11 1 324 20 363 3.81e-31 121
MS.gene046353.t1 MTR_1g092760 30.032 313 179 11 13 307 40 330 4.20e-31 120
MS.gene046353.t1 MTR_1g060500 31.861 317 176 12 13 307 41 339 4.90e-31 120
MS.gene046353.t1 MTR_1g030340 30.347 346 191 10 12 320 42 374 7.05e-31 120
MS.gene046353.t1 MTR_1g060490 29.773 309 185 12 13 307 38 328 9.10e-31 119
MS.gene046353.t1 MTR_7g033165 30.347 346 193 11 12 321 33 366 1.29e-30 119
MS.gene046353.t1 MTR_5g087690 27.726 321 208 8 12 319 50 359 1.31e-30 119
MS.gene046353.t1 MTR_4g104240 26.409 337 211 8 13 323 40 365 2.46e-30 119
MS.gene046353.t1 MTR_6g007090 27.778 342 211 7 9 323 36 368 6.45e-30 117
MS.gene046353.t1 MTR_6g007100 30.149 335 195 11 12 323 33 351 1.04e-29 117
MS.gene046353.t1 MTR_2g043980 30.769 338 194 12 4 320 28 346 1.35e-29 116
MS.gene046353.t1 MTR_6g007095 30.523 344 193 10 12 323 41 370 1.40e-29 119
MS.gene046353.t1 MTR_6g007095 27.181 298 199 5 40 323 393 686 1.88e-24 104
MS.gene046353.t1 MTR_2g015580 28.902 346 208 11 8 324 43 379 2.48e-29 116
MS.gene046353.t1 MTR_2g015670 28.286 350 205 11 1 324 20 349 1.45e-27 110
MS.gene046353.t1 MTR_2g015590 31.047 277 168 8 10 269 29 299 1.95e-27 110
MS.gene046353.t1 MTR_0029s0050 27.893 337 215 11 1 320 19 344 3.51e-27 110
MS.gene046353.t1 MTR_2g079080 27.893 337 215 11 1 320 19 344 3.51e-27 110
MS.gene046353.t1 MTR_2g079090 27.893 337 215 11 1 320 19 344 3.92e-27 109
MS.gene046353.t1 MTR_0029s0100 27.893 337 215 11 1 320 19 344 1.04e-26 108
MS.gene046353.t1 MTR_2g017925 33.333 240 143 8 103 335 22 251 1.40e-26 106
MS.gene046353.t1 MTR_1g092740 27.885 312 187 9 13 307 39 329 2.60e-25 104
MS.gene046353.t1 MTR_1g030268 31.769 277 157 8 12 269 40 303 3.97e-25 103
MS.gene046353.t1 MTR_3g448360 26.136 352 217 11 1 321 18 357 4.03e-25 104
MS.gene046353.t1 MTR_8g038680 26.331 357 220 10 1 323 15 362 7.42e-25 103
MS.gene046353.t1 MTR_7g033165 31.343 268 150 8 12 257 33 288 1.05e-24 102
MS.gene046353.t1 MTR_3g463960 26.554 354 205 15 4 320 38 373 3.52e-24 102
MS.gene046353.t1 MTR_3g463950 26.554 354 205 15 4 320 38 373 3.52e-24 102
MS.gene046353.t1 MTR_3g463970 26.554 354 205 15 4 320 38 373 3.52e-24 102
MS.gene046353.t1 MTR_3g463940 26.554 354 205 15 4 320 38 373 3.52e-24 102
MS.gene046353.t1 MTR_3g463930 27.019 359 204 16 4 320 38 380 4.58e-24 102
MS.gene046353.t1 MTR_0127s0040 28.689 244 157 8 104 336 1 238 2.53e-23 97.1
MS.gene046353.t1 MTR_1g079590 34.426 183 111 5 12 187 31 211 9.56e-23 94.7
MS.gene046353.t1 MTR_3g069780 27.011 348 216 11 1 320 19 356 3.77e-22 96.3
MS.gene046353.t1 MTR_3g438030 27.011 348 216 11 1 320 19 356 5.01e-22 95.9
MS.gene046353.t1 MTR_7g111780 29.435 248 151 6 87 317 9 249 9.53e-22 93.2
MS.gene046353.t1 MTR_1g060520 27.215 316 156 12 13 307 41 303 2.48e-21 93.2
MS.gene046353.t1 MTR_3g069520 26.346 353 212 11 1 321 19 355 7.79e-21 92.4
MS.gene046353.t1 MTR_1108s0010 29.187 209 124 4 112 311 3 196 7.79e-21 89.7
MS.gene046353.t1 MTR_8g089805 26.333 300 178 8 58 320 13 306 3.21e-20 90.1
MS.gene046353.t1 MTR_7g113860 26.421 299 166 9 63 320 8 293 3.50e-20 89.7
MS.gene046353.t1 MTR_8g012540 25.000 308 203 7 1 288 15 314 7.14e-20 89.4
MS.gene046353.t1 MTR_5g093090 33.898 177 104 5 12 177 28 202 9.44e-20 86.7
MS.gene046353.t1 MTR_5g074210 33.099 142 88 3 180 315 62 202 1.61e-19 86.3
MS.gene046353.t1 MTR_1g030265 27.835 291 168 9 65 320 53 336 2.54e-19 87.8
MS.gene046353.t1 MTR_2g018015 34.653 202 113 8 12 201 36 230 1.50e-18 85.1
MS.gene046353.t1 MTR_2g043990 29.825 285 145 10 4 269 90 338 9.31e-17 80.5
MS.gene046353.t1 MTR_4g036375 34.483 145 88 4 12 151 30 172 4.60e-16 75.9
MS.gene046353.t1 MTR_6g049230 40.541 111 63 2 171 281 63 170 1.76e-15 74.3
MS.gene046353.t1 MTR_4g036385 35.922 103 60 1 217 313 21 123 1.03e-13 67.8
MS.gene046353.t1 MTR_2g017895 24.101 278 171 12 72 336 17 267 1.40e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene046353.t1 AT1G53920 51.471 340 147 6 12 336 48 384 1.05e-120 353
MS.gene046353.t1 AT5G40990 50.000 346 159 4 4 336 29 373 3.59e-120 351
MS.gene046353.t1 AT1G53940 49.128 344 161 4 6 336 33 375 3.84e-115 338
MS.gene046353.t1 AT3G14225 46.221 344 171 4 6 336 31 373 9.58e-109 322
MS.gene046353.t1 AT3G14225 45.977 348 170 5 6 336 31 377 1.53e-107 319
MS.gene046353.t1 AT1G53990 46.243 346 165 5 4 336 27 364 2.80e-103 308
MS.gene046353.t1 AT1G53940 48.881 268 134 2 6 271 33 299 1.16e-86 263
MS.gene046353.t1 AT1G71120 33.531 337 197 7 12 333 31 355 2.17e-60 197
MS.gene046353.t1 AT5G08460 33.828 337 205 9 12 333 49 382 4.67e-55 184
MS.gene046353.t1 AT1G54030 34.251 327 192 10 13 334 53 361 9.08e-55 184
MS.gene046353.t1 AT2G04570 35.045 331 195 9 12 330 28 350 1.00e-54 182
MS.gene046353.t1 AT4G26790 36.250 320 184 10 9 314 26 339 1.54e-54 182
MS.gene046353.t1 AT4G26790 36.250 320 184 10 9 314 26 339 1.54e-54 182
MS.gene046353.t1 AT5G41890 35.530 349 193 12 14 336 33 375 4.02e-53 179
MS.gene046353.t1 AT1G20132 32.508 323 202 8 8 318 57 375 3.05e-52 177
MS.gene046353.t1 AT1G71691 33.837 331 205 6 12 333 55 380 3.78e-52 177
MS.gene046353.t1 AT5G15720 32.544 338 212 7 12 336 30 364 6.41e-52 176
MS.gene046353.t1 AT3G14820 36.538 312 178 10 12 311 32 335 1.89e-51 174
MS.gene046353.t1 AT1G20120 33.739 329 191 11 12 322 78 397 5.36e-51 174
MS.gene046353.t1 AT5G45960 36.890 328 177 14 8 314 41 359 6.27e-51 173
MS.gene046353.t1 AT2G23540 33.524 349 201 12 11 336 47 387 8.67e-51 173
MS.gene046353.t1 AT1G06990 34.713 314 182 12 12 309 37 343 9.38e-51 172
MS.gene046353.t1 AT3G50400 33.523 352 204 13 8 336 30 374 3.20e-50 171
MS.gene046353.t1 AT5G42170 33.125 320 194 10 13 319 51 363 1.07e-49 170
MS.gene046353.t1 AT5G37690 33.546 313 190 8 14 314 29 335 1.39e-49 169
MS.gene046353.t1 AT5G33370 32.153 339 210 8 12 336 30 362 1.07e-48 167
MS.gene046353.t1 AT2G42990 33.229 319 189 10 9 311 25 335 2.12e-48 166
MS.gene046353.t1 AT5G45950 31.288 326 204 10 2 315 28 345 2.26e-48 166
MS.gene046353.t1 AT2G40250 33.229 319 193 11 12 314 36 350 5.31e-48 165
MS.gene046353.t1 AT3G16370 32.919 322 193 10 12 317 30 344 1.35e-47 164
MS.gene046353.t1 AT1G29660 33.036 336 207 10 14 336 34 364 1.39e-47 164
MS.gene046353.t1 AT3G53100 32.492 317 194 9 12 314 29 339 1.59e-47 164
MS.gene046353.t1 AT5G03820 33.962 318 190 10 12 314 33 345 4.14e-47 163
MS.gene046353.t1 AT4G28780 29.882 338 219 8 12 336 31 363 7.96e-47 162
MS.gene046353.t1 AT5G22810 34.700 317 190 8 12 314 34 347 8.09e-47 162
MS.gene046353.t1 AT5G03820 33.962 318 190 10 12 314 61 373 1.59e-46 162
MS.gene046353.t1 AT1G20130 32.622 328 192 11 12 317 184 504 2.39e-46 164
MS.gene046353.t1 AT1G20130 32.622 328 192 11 12 317 204 524 3.16e-46 164
MS.gene046353.t1 AT1G75890 32.298 322 200 9 12 317 47 366 5.03e-46 160
MS.gene046353.t1 AT3G04290 30.564 337 214 8 9 331 26 356 7.28e-46 160
MS.gene046353.t1 AT1G75890 32.298 322 200 9 12 317 76 395 1.06e-45 160
MS.gene046353.t1 AT1G20135 33.438 317 190 10 3 309 17 322 1.27e-45 158
MS.gene046353.t1 AT3G14210 32.440 336 198 11 12 333 36 356 1.54e-45 160
MS.gene046353.t1 AT5G18430 31.778 343 208 10 12 336 28 362 3.20e-45 158
MS.gene046353.t1 AT1G74460 32.278 316 198 7 14 317 25 336 4.01e-45 158
MS.gene046353.t1 AT5G37690 33.439 314 181 10 14 314 29 327 4.85e-45 157
MS.gene046353.t1 AT1G75890 31.045 335 200 9 12 317 47 379 1.89e-44 156
MS.gene046353.t1 AT1G54010 31.343 335 199 12 13 333 37 354 1.99e-44 157
MS.gene046353.t1 AT1G54000 31.737 334 201 11 12 333 36 354 2.88e-44 156
MS.gene046353.t1 AT1G59406 32.372 312 192 10 12 311 30 334 2.95e-44 155
MS.gene046353.t1 AT1G59030 32.372 312 192 10 12 311 30 334 2.95e-44 155
MS.gene046353.t1 AT1G58725 32.372 312 192 10 12 311 30 334 2.95e-44 155
MS.gene046353.t1 AT1G58430 32.716 324 192 11 12 317 35 350 2.97e-44 155
MS.gene046353.t1 AT5G03810 31.962 316 198 7 12 314 30 341 3.13e-44 155
MS.gene046353.t1 AT1G71250 30.357 336 214 8 12 333 41 370 5.38e-44 155
MS.gene046353.t1 AT1G54020 31.928 332 198 12 13 334 34 347 5.66e-44 155
MS.gene046353.t1 AT2G19050 30.564 337 200 10 14 336 33 349 3.09e-43 152
MS.gene046353.t1 AT2G19060 31.790 324 185 12 14 320 32 336 5.23e-43 152
MS.gene046353.t1 AT5G63170 32.803 314 175 13 12 309 28 321 6.47e-43 151
MS.gene046353.t1 AT3G14220 30.746 335 201 14 13 333 33 350 3.59e-42 150
MS.gene046353.t1 AT5G55050 32.558 344 199 13 13 333 40 373 5.09e-42 150
MS.gene046353.t1 AT1G28640 30.612 343 201 10 8 321 31 365 7.46e-42 150
MS.gene046353.t1 AT1G75900 31.193 327 194 11 12 319 43 357 8.14e-42 149
MS.gene046353.t1 AT4G01130 31.549 355 188 10 12 327 34 372 1.84e-41 149
MS.gene046353.t1 AT4G18970 30.925 346 202 11 14 336 30 361 2.77e-41 147
MS.gene046353.t1 AT5G45670 30.029 343 203 10 14 333 31 359 4.87e-41 147
MS.gene046353.t1 AT4G30140 30.699 329 202 11 14 333 35 346 4.99e-41 147
MS.gene046353.t1 AT1G75880 31.975 319 201 8 12 317 52 367 6.60e-41 147
MS.gene046353.t1 AT2G30310 30.435 322 202 10 12 317 34 349 8.05e-41 146
MS.gene046353.t1 AT4G18970 30.925 346 202 11 14 336 30 361 1.63e-40 147
MS.gene046353.t1 AT4G10950 29.032 341 217 11 12 335 71 403 1.83e-40 146
MS.gene046353.t1 AT2G03980 29.154 319 200 9 12 314 43 351 1.84e-40 145
MS.gene046353.t1 AT2G03980 29.154 319 200 9 12 314 43 351 1.84e-40 145
MS.gene046353.t1 AT2G03980 29.154 319 200 9 12 314 43 351 1.84e-40 145
MS.gene046353.t1 AT2G03980 29.154 319 200 9 12 314 43 351 1.84e-40 145
MS.gene046353.t1 AT1G29670 30.088 339 214 12 13 336 33 363 1.96e-40 145
MS.gene046353.t1 AT2G30220 31.056 322 200 10 12 317 33 348 2.06e-40 145
MS.gene046353.t1 AT1G75880 31.761 318 202 8 12 317 52 366 3.93e-40 145
MS.gene046353.t1 AT2G24560 31.366 322 199 10 12 317 34 349 9.90e-40 144
MS.gene046353.t1 AT1G29670 30.088 339 214 12 13 336 101 431 1.16e-39 145
MS.gene046353.t1 AT1G58520 31.746 315 183 12 12 311 30 327 1.61e-39 142
MS.gene046353.t1 AT1G58525 31.746 315 183 12 12 311 30 327 1.61e-39 142
MS.gene046353.t1 AT1G54030 35.484 248 140 8 12 257 52 281 2.14e-39 141
MS.gene046353.t1 AT1G75930 35.238 315 186 11 12 317 29 334 7.34e-39 141
MS.gene046353.t1 AT5G15720 33.459 266 166 6 12 269 30 292 8.92e-39 140
MS.gene046353.t1 AT1G75920 32.154 311 197 9 12 315 29 332 2.68e-38 139
MS.gene046353.t1 AT2G19010 29.305 331 208 10 13 333 31 345 2.80e-38 139
MS.gene046353.t1 AT4G10950 29.326 341 212 13 12 335 71 399 3.46e-38 140
MS.gene046353.t1 AT2G19010 29.217 332 209 10 12 333 60 375 8.14e-38 139
MS.gene046353.t1 AT1G28650 30.409 342 201 11 8 320 33 366 1.48e-37 138
MS.gene046353.t1 AT3G43570 30.128 312 170 11 12 311 30 305 4.97e-37 135
MS.gene046353.t1 AT3G26430 32.945 343 188 11 12 320 31 365 5.87e-37 137
MS.gene046353.t1 AT1G33811 30.952 336 214 12 13 333 35 367 6.29e-37 136
MS.gene046353.t1 AT2G31540 31.056 322 200 10 12 317 35 350 1.09e-36 135
MS.gene046353.t1 AT1G71691 33.588 262 165 5 12 269 55 311 1.16e-36 134
MS.gene046353.t1 AT1G23500 33.229 319 189 13 12 320 35 339 1.28e-36 135
MS.gene046353.t1 AT2G27360 29.545 352 198 13 12 330 33 367 2.36e-36 135
MS.gene046353.t1 AT1G71691 29.682 283 187 5 63 336 3 282 6.19e-36 131
MS.gene046353.t1 AT1G75920 30.675 326 197 9 12 315 24 342 2.77e-35 131
MS.gene046353.t1 AT2G19050 31.746 252 149 6 14 256 33 270 2.85e-35 130
MS.gene046353.t1 AT5G03610 32.188 320 181 11 7 308 38 339 4.52e-35 131
MS.gene046353.t1 AT1G73610 29.808 312 202 7 12 317 35 335 4.86e-35 130
MS.gene046353.t1 AT1G75910 32.051 312 197 10 12 315 28 332 9.15e-35 130
MS.gene046353.t1 AT1G28660 29.706 340 206 11 8 320 31 364 2.28e-34 130
MS.gene046353.t1 AT1G54790 29.178 353 192 11 9 320 29 364 3.05e-34 129
MS.gene046353.t1 AT3G43550 31.939 263 168 7 12 269 30 286 4.19e-34 127
MS.gene046353.t1 AT3G09930 31.847 314 179 11 13 308 40 336 6.76e-34 128
MS.gene046353.t1 AT3G09930 31.847 314 179 11 13 308 40 336 6.76e-34 128
MS.gene046353.t1 AT5G15720 28.671 286 191 5 64 336 48 333 9.49e-34 127
MS.gene046353.t1 AT1G28580 28.235 340 211 10 8 320 33 366 1.50e-33 127
MS.gene046353.t1 AT1G28670 29.532 342 205 11 8 320 31 365 2.29e-33 127
MS.gene046353.t1 AT5G33370 31.698 265 170 6 12 269 30 290 2.37e-33 126
MS.gene046353.t1 AT1G28660 29.706 340 205 12 8 320 31 363 8.05e-33 125
MS.gene046353.t1 AT1G28600 28.994 338 202 11 12 320 31 359 1.12e-32 125
MS.gene046353.t1 AT4G01130 32.616 279 153 7 12 269 34 298 1.81e-32 124
MS.gene046353.t1 AT1G28570 27.429 350 213 11 3 320 23 363 2.64e-32 124
MS.gene046353.t1 AT1G67830 30.029 343 198 12 12 320 30 364 7.54e-32 123
MS.gene046353.t1 AT5G14450 30.058 346 192 10 12 320 41 373 1.39e-31 122
MS.gene046353.t1 AT1G31550 28.736 348 204 12 12 330 36 368 1.40e-31 122
MS.gene046353.t1 AT1G28590 27.778 342 210 10 8 320 32 365 1.72e-31 122
MS.gene046353.t1 AT3G48460 28.363 342 196 12 13 321 39 364 7.05e-31 120
MS.gene046353.t1 AT5G45910 30.523 344 201 11 9 320 27 364 1.54e-30 119
MS.gene046353.t1 AT1G75920 30.526 285 186 8 38 315 25 304 2.14e-30 117
MS.gene046353.t1 AT1G75920 29.221 308 179 8 12 315 29 301 2.31e-30 117
MS.gene046353.t1 AT5G03600 30.990 313 186 8 7 308 9 302 4.97e-30 117
MS.gene046353.t1 AT5G03600 30.990 313 186 8 7 308 44 337 7.73e-30 117
MS.gene046353.t1 AT4G16230 37.321 209 119 8 5 204 22 227 4.38e-29 112
MS.gene046353.t1 AT2G24560 30.258 271 176 8 12 273 34 300 9.63e-29 113
MS.gene046353.t1 AT3G62280 27.864 323 213 6 9 317 33 349 1.08e-28 114
MS.gene046353.t1 AT3G27950 30.178 338 201 10 12 323 32 360 1.19e-28 114
MS.gene046353.t1 AT1G54020 29.151 271 167 9 73 334 7 261 1.70e-28 112
MS.gene046353.t1 AT1G54020 29.151 271 167 9 73 334 7 261 1.70e-28 112
MS.gene046353.t1 AT1G54020 29.151 271 167 9 73 334 7 261 1.70e-28 112
MS.gene046353.t1 AT3G05180 27.954 347 208 11 12 325 36 373 2.61e-28 113
MS.gene046353.t1 AT1G09390 28.793 323 200 8 12 314 37 349 3.43e-28 113
MS.gene046353.t1 AT1G54790 27.222 360 204 11 2 320 21 363 7.69e-28 112
MS.gene046353.t1 AT1G28610 27.221 349 208 13 12 330 31 363 7.95e-28 112
MS.gene046353.t1 AT1G31550 27.666 347 206 12 12 330 36 365 1.09e-27 112
MS.gene046353.t1 AT1G56670 27.523 327 199 8 12 314 40 352 2.31e-27 110
MS.gene046353.t1 AT4G01130 29.010 293 166 8 70 327 1 286 2.77e-27 108
MS.gene046353.t1 AT2G04020 36.190 210 104 9 12 206 43 237 4.08e-27 107
MS.gene046353.t1 AT2G04020 35.714 210 105 8 12 206 43 237 1.48e-26 107
MS.gene046353.t1 AT1G54020 30.000 210 133 5 134 334 8 212 1.78e-25 102
MS.gene046353.t1 AT3G14210 32.381 210 127 6 136 333 22 228 2.74e-25 102
MS.gene046353.t1 AT1G53970 59.211 76 31 0 6 81 14 89 1.99e-24 95.9
MS.gene046353.t1 AT1G53970 59.211 76 31 0 6 81 14 89 1.99e-24 95.9
MS.gene046353.t1 AT1G54790 25.130 386 205 12 2 320 21 389 1.27e-22 98.2
MS.gene046353.t1 AT2G31550 30.244 205 123 6 114 307 4 199 1.39e-21 91.7
MS.gene046353.t1 AT3G62280 28.839 267 175 6 9 271 33 288 5.14e-21 92.0
MS.gene046353.t1 AT1G56670 27.273 275 166 8 12 269 40 297 3.15e-19 87.0
MS.gene046353.t1 AT1G28580 26.056 284 178 9 63 320 8 285 8.76e-19 85.9
MS.gene046353.t1 AT2G36325 29.781 319 184 15 9 308 44 341 9.99e-19 86.3
MS.gene046353.t1 AT1G28600 36.054 147 77 6 16 150 35 176 1.66e-17 80.5
MS.gene046353.t1 AT4G16233 31.200 125 76 2 217 333 5 127 2.65e-16 75.1
MS.gene046353.t1 AT5G03590 26.882 279 146 8 41 308 11 242 9.80e-16 76.3
MS.gene046353.t1 AT1G28610 41.573 89 47 2 16 101 35 121 1.72e-13 69.7

Find 68 sgRNAs with CRISPR-Local

Find 125 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATTTGGGTTGCTTAATT+TGG 0.083505 8.3:+69117152 MS.gene046353:CDS
GACCTAGGTGGAAGAAAATT+TGG 0.128289 8.3:+69117138 MS.gene046353:CDS
CATGGTGCACTATTCATATT+TGG 0.201400 8.3:+69115598 MS.gene046353:CDS
GAATTTATTCAGGGAGAAAT+TGG 0.207250 8.3:+69116847 MS.gene046353:CDS
ATTTCCATTCCATATCAATT+TGG 0.257049 8.3:-69117625 None:intergenic
AAAAGGTAAAGAATTTATTC+AGG 0.269859 8.3:+69116837 MS.gene046353:CDS
AATATTTCGCCAAATTGATA+TGG 0.273243 8.3:+69117616 MS.gene046353:CDS
GGAGATTCACTATTTGATAA+TGG 0.318592 8.3:+69115619 MS.gene046353:CDS
TTAACTCCATAGATATATTC+AGG 0.319254 8.3:-69116616 None:intergenic
CAATTTGTTGATATTGTCAT+TGG 0.319994 8.3:+69116989 MS.gene046353:CDS
CAATGACTATGGTAGTCTTC+TGG 0.327833 8.3:+69116928 MS.gene046353:CDS
AATAGCTGCTTTAGATTGTA+AGG 0.329509 8.3:-69117663 None:intergenic
CAATACAAGCATTGGTAATC+AGG 0.334657 8.3:+69115657 MS.gene046353:CDS
AAATTTGGGTTGCTTAATTT+GGG 0.339152 8.3:+69117153 MS.gene046353:CDS
AATAGTGCACCATGTTTCTT+AGG 0.357221 8.3:-69115589 None:intergenic
GGGTGACCTGGATGCAAATA+TGG 0.373892 8.3:-69116595 None:intergenic
CTATCCTAGCATAAGAATAT+TGG 0.377524 8.3:+69117188 MS.gene046353:CDS
GGTAGAAGAACACCAGAGTT+TGG 0.379836 8.3:-69116953 None:intergenic
ACTAAACAAGTATACAGATT+TGG 0.388322 8.3:-69116897 None:intergenic
ATAAGAATATTGGTTAATAA+TGG 0.401415 8.3:+69117198 MS.gene046353:CDS
ATGAAGTATCCTTCAAACTA+TGG 0.406479 8.3:+69117366 MS.gene046353:CDS
ACCTAGGTGGAAGAAAATTT+GGG 0.409923 8.3:+69117139 MS.gene046353:CDS
ACAAATTGTTGATGATCAAC+AGG 0.420612 8.3:-69116974 None:intergenic
AAAATCGTACCAACAAAATC+TGG 0.421278 8.3:-69115751 None:intergenic
ACTTTCTTTAAGTACCCTTC+TGG 0.425473 8.3:+69115703 MS.gene046353:CDS
GGTCACCCTGAATATATCTA+TGG 0.427944 8.3:+69116610 MS.gene046353:CDS
TCTGTATACTTGTTTAGTGT+TGG 0.434855 8.3:+69116902 MS.gene046353:CDS
AAGCTAGAGAACCAGCTAAA+GGG 0.442204 8.3:+69117297 MS.gene046353:CDS
AATATTTGAACCCCTTTAGC+TGG 0.444991 8.3:-69117308 None:intergenic
TTAACCAATATTCTTATGCT+AGG 0.460332 8.3:-69117192 None:intergenic
TTGCTTAATTTGGGTCCGTT+TGG 0.462457 8.3:+69117162 MS.gene046353:CDS
AAAGGTAAAGAATTTATTCA+GGG 0.463738 8.3:+69116838 MS.gene046353:CDS
AATTTATTCAGGGAGAAATT+GGG 0.469419 8.3:+69116848 MS.gene046353:CDS
AAATTGATATGGAATGGAAA+TGG 0.479120 8.3:+69117627 MS.gene046353:CDS
GCATGTTGTGGAAGTGGCTG+TGG 0.481080 8.3:+69117510 MS.gene046353:CDS
TTCGCCAAATTGATATGGAA+TGG 0.491966 8.3:+69117621 MS.gene046353:CDS
AACTACATCAATACAAGCAT+TGG 0.493799 8.3:+69115649 MS.gene046353:CDS
TATTGATTAGCTTTCTCTGT+AGG 0.500420 8.3:-69117597 None:intergenic
CAGGCAAATTATCCTCCCTA+TGG 0.501668 8.3:+69115676 MS.gene046353:CDS
TGCAAATATGGTGGAAGTAG+AGG 0.513679 8.3:-69116583 None:intergenic
TTGTAGGAAATTTATGACCT+AGG 0.513937 8.3:+69117123 MS.gene046353:intron
TTAAAGAAAGTCTGTCCATA+GGG 0.522108 8.3:-69115691 None:intergenic
GAATGTGTACCATAGTTTGA+AGG 0.527964 8.3:-69117375 None:intergenic
AGTGTTGGAAGCAATGACTA+TGG 0.531068 8.3:+69116917 MS.gene046353:CDS
CTTCCACCATATTTGCATCC+AGG 0.531243 8.3:+69116589 MS.gene046353:CDS
AAAGCTAGAGAACCAGCTAA+AGG 0.532853 8.3:+69117296 MS.gene046353:CDS
TTGGTTAATAATGGAACAGA+AGG 0.533866 8.3:+69117207 MS.gene046353:CDS
AGTCTTCTGGATCCAAACTC+TGG 0.534866 8.3:+69116941 MS.gene046353:CDS
CTTAAAGAAAGTCTGTCCAT+AGG 0.538225 8.3:-69115692 None:intergenic
GCACTCTCTCAAACATCTCA+AGG 0.540073 8.3:+69116661 MS.gene046353:CDS
TGGTGGAAGTAGAGGCAACT+TGG 0.541652 8.3:-69116575 None:intergenic
GAAGCAAGTGTAGCATGTTG+TGG 0.548799 8.3:+69117498 MS.gene046353:CDS
TAGATATATTCAGGGTGACC+TGG 0.550497 8.3:-69116607 None:intergenic
TAACTCCATAGATATATTCA+GGG 0.561814 8.3:-69116615 None:intergenic
AGTGTAGCATGTTGTGGAAG+TGG 0.577374 8.3:+69117504 MS.gene046353:CDS
ATGCTAGGATAGCAGCCAAA+CGG 0.580010 8.3:-69117177 None:intergenic
CATAAATGAAATTTCAGCAG+TGG 0.585639 8.3:+69117236 MS.gene046353:CDS
AGCTAGAGAACCAGCTAAAG+GGG 0.587898 8.3:+69117298 MS.gene046353:CDS
CCGTCAGAAAATCTACCAGA+AGG 0.595079 8.3:-69115718 None:intergenic
TGTTGTGGAAGTGGCTGTGG+AGG 0.606060 8.3:+69117513 MS.gene046353:CDS
ATACTTTGATGACATTTGTG+AGG 0.609808 8.3:-69117015 None:intergenic
CGTCAGAAAATCTACCAGAA+GGG 0.641192 8.3:-69115717 None:intergenic
TAGGAAATTTATGACCTAGG+TGG 0.647961 8.3:+69117126 MS.gene046353:intron
AAGAAAGTCTGTCCATAGGG+AGG 0.658983 8.3:-69115688 None:intergenic
GTTGTGGAAGTGGCTGTGGA+GGG 0.661412 8.3:+69117514 MS.gene046353:CDS
ATGGAAATGGCAGTGTCACA+TGG 0.664922 8.3:+69117640 MS.gene046353:CDS
AATTGCTTGCCTAAGAAACA+TGG 0.674205 8.3:+69115580 MS.gene046353:CDS
TGACCTGGATGCAAATATGG+TGG 0.680616 8.3:-69116592 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACATATGTTTATTTTTTTTT+AGG + chr8.3:69115794-69115813 MS.gene046353:intron 10.0%
!!! ATATGTTTATTTTTTTTTAG+GGG + chr8.3:69115796-69115815 MS.gene046353:intron 10.0%
!!! ATGTTTTGAAAAAAAAAAAT+TGG - chr8.3:69115778-69115797 None:intergenic 10.0%
!!! CATATGTTTATTTTTTTTTA+GGG + chr8.3:69115795-69115814 MS.gene046353:intron 10.0%
!!! TTTATGTTTGATAAATTTTT+GGG + chr8.3:69117464-69117483 MS.gene046353:intron 10.0%
!!! TTTTATGTTTGATAAATTTT+TGG + chr8.3:69117463-69117482 MS.gene046353:intron 10.0%
!! TATATGATATGTTTATTTGT+AGG + chr8.3:69117107-69117126 MS.gene046353:intron 15.0%
!!! AAAAAAGTTAACTTTTTATC+CGG + chr8.3:69116186-69116205 MS.gene046353:intron 15.0%
!!! AAATATAGTTTTCATTTTAG+AGG - chr8.3:69116729-69116748 None:intergenic 15.0%
!!! AAGTTAACTTTTTTTAAAGA+AGG - chr8.3:69116180-69116199 None:intergenic 15.0%
!!! ATAAGAATATTGGTTAATAA+TGG + chr8.3:69117198-69117217 MS.gene046353:CDS 15.0%
!! AAAAGGTAAAGAATTTATTC+AGG + chr8.3:69116837-69116856 MS.gene046353:CDS 20.0%
!! AAAGGTAAAGAATTTATTCA+GGG + chr8.3:69116838-69116857 MS.gene046353:CDS 20.0%
!! TCAGTTGAGTTATTTAAAAA+AGG + chr8.3:69116820-69116839 MS.gene046353:CDS 20.0%
!!! AAAAAGTTAACTTTTTATCC+GGG + chr8.3:69116187-69116206 MS.gene046353:intron 20.0%
!!! TTTTGTTTTCTTAGAAATCA+AGG - chr8.3:69116515-69116534 None:intergenic 20.0%
! AAATTGATATGGAATGGAAA+TGG + chr8.3:69117627-69117646 MS.gene046353:CDS 25.0%
! AATATTTCGCCAAATTGATA+TGG + chr8.3:69117616-69117635 MS.gene046353:CDS 25.0%
! AATTTATTCAGGGAGAAATT+GGG + chr8.3:69116848-69116867 MS.gene046353:CDS 25.0%
! ACTAAACAAGTATACAGATT+TGG - chr8.3:69116900-69116919 None:intergenic 25.0%
! AGAAAAATCATCTTAGACTT+TGG - chr8.3:69116019-69116038 None:intergenic 25.0%
! ATTTCCATTCCATATCAATT+TGG - chr8.3:69117628-69117647 None:intergenic 25.0%
! GAAAAATCATCTTAGACTTT+GGG - chr8.3:69116018-69116037 None:intergenic 25.0%
! TAACTCCATAGATATATTCA+GGG - chr8.3:69116618-69116637 None:intergenic 25.0%
! TTAACCAATATTCTTATGCT+AGG - chr8.3:69117195-69117214 None:intergenic 25.0%
! TTAACTCCATAGATATATTC+AGG - chr8.3:69116619-69116638 None:intergenic 25.0%
! TTGTAACACTCTAATCAAAA+TGG - chr8.3:69116307-69116326 None:intergenic 25.0%
! TTGTTAGCACAAAAAAATCA+AGG - chr8.3:69117056-69117075 None:intergenic 25.0%
!! TTCGATTGTTGTTAACATAT+AGG + chr8.3:69116781-69116800 MS.gene046353:intron 25.0%
!!! AAAATTTGGGTTGCTTAATT+TGG + chr8.3:69117152-69117171 MS.gene046353:CDS 25.0%
!!! AAATTTGGGTTGCTTAATTT+GGG + chr8.3:69117153-69117172 MS.gene046353:CDS 25.0%
!!! CAATTTGTTGATATTGTCAT+TGG + chr8.3:69116989-69117008 MS.gene046353:CDS 25.0%
!!! TGTTTGATAAATTTTTGGGA+AGG + chr8.3:69117468-69117487 MS.gene046353:intron 25.0%
AAAATCGTACCAACAAAATC+TGG - chr8.3:69115754-69115773 None:intergenic 30.0%
AACTACATCAATACAAGCAT+TGG + chr8.3:69115649-69115668 MS.gene046353:CDS 30.0%
AGAACTCCTAAAAAAAGTGA+CGG - chr8.3:69116048-69116067 None:intergenic 30.0%
AGACTCCTAACAATTATGTA+GGG - chr8.3:69115874-69115893 None:intergenic 30.0%
CATAAATGAAATTTCAGCAG+TGG + chr8.3:69117236-69117255 MS.gene046353:CDS 30.0%
CTATCCTAGCATAAGAATAT+TGG + chr8.3:69117188-69117207 MS.gene046353:CDS 30.0%
GAATTTATTCAGGGAGAAAT+TGG + chr8.3:69116847-69116866 MS.gene046353:CDS 30.0%
GGAGATTCACTATTTGATAA+TGG + chr8.3:69115619-69115638 MS.gene046353:CDS 30.0%
GTAATCTCTAGTATATCATG+TGG - chr8.3:69116078-69116097 None:intergenic 30.0%
TCTGTATACTTGTTTAGTGT+TGG + chr8.3:69116902-69116921 MS.gene046353:CDS 30.0%
TGCATGATGTAGTCTAATTA+AGG + chr8.3:69116127-69116146 MS.gene046353:intron 30.0%
TTAAAGAAAGTCTGTCCATA+GGG - chr8.3:69115694-69115713 None:intergenic 30.0%
TTGTAGGAAATTTATGACCT+AGG + chr8.3:69117123-69117142 MS.gene046353:intron 30.0%
! AATAACTCAACTGAGTTTTC+AGG - chr8.3:69116814-69116833 None:intergenic 30.0%
! AATAGCTGCTTTAGATTGTA+AGG - chr8.3:69117666-69117685 None:intergenic 30.0%
! ATACTTTGATGACATTTGTG+AGG - chr8.3:69117018-69117037 None:intergenic 30.0%
! ATGAAGTATCCTTCAAACTA+TGG + chr8.3:69117366-69117385 MS.gene046353:CDS 30.0%
! TATGGAGTTAATTTTGCATC+AGG + chr8.3:69116628-69116647 MS.gene046353:CDS 30.0%
! TTGGTTAATAATGGAACAGA+AGG + chr8.3:69117207-69117226 MS.gene046353:CDS 30.0%
!! ACAAATTGTTGATGATCAAC+AGG - chr8.3:69116977-69116996 None:intergenic 30.0%
!! TATTGATTAGCTTTCTCTGT+AGG - chr8.3:69117600-69117619 None:intergenic 30.0%
!!! TTCATTCCGTCACTTTTTTT+AGG + chr8.3:69116039-69116058 MS.gene046353:intron 30.0%
AATAGTGCACCATGTTTCTT+AGG - chr8.3:69115592-69115611 None:intergenic 35.0%
AATATTTGAACCCCTTTAGC+TGG - chr8.3:69117311-69117330 None:intergenic 35.0%
AATTGCTTGCCTAAGAAACA+TGG + chr8.3:69115580-69115599 MS.gene046353:CDS 35.0%
ACATAATTGTTAGGAGTCTG+AGG + chr8.3:69115875-69115894 MS.gene046353:intron 35.0%
ACCTAGGTGGAAGAAAATTT+GGG + chr8.3:69117139-69117158 MS.gene046353:CDS 35.0%
ACTTTCTTTAAGTACCCTTC+TGG + chr8.3:69115703-69115722 MS.gene046353:CDS 35.0%
ATATCTCGATAACAAGAGAG+AGG + chr8.3:69115925-69115944 MS.gene046353:intron 35.0%
ATCCTCCCTACATAATTGTT+AGG + chr8.3:69115866-69115885 MS.gene046353:intron 35.0%
ATCTCTAGTATATCATGTGG+CGG - chr8.3:69116075-69116094 None:intergenic 35.0%
CAGACTCCTAACAATTATGT+AGG - chr8.3:69115875-69115894 None:intergenic 35.0%
CATAATTGTTAGGAGTCTGA+GGG + chr8.3:69115876-69115895 MS.gene046353:intron 35.0%
CATGGTGCACTATTCATATT+TGG + chr8.3:69115598-69115617 MS.gene046353:CDS 35.0%
CTTAAAGAAAGTCTGTCCAT+AGG - chr8.3:69115695-69115714 None:intergenic 35.0%
GAATGTGTACCATAGTTTGA+AGG - chr8.3:69117378-69117397 None:intergenic 35.0%
GATTGTCAAAAAACCTGAAC+AGG + chr8.3:69116460-69116479 MS.gene046353:intron 35.0%
TAGGAAATTTATGACCTAGG+TGG + chr8.3:69117126-69117145 MS.gene046353:intron 35.0%
TATCTCGATAACAAGAGAGA+GGG + chr8.3:69115926-69115945 MS.gene046353:intron 35.0%
TTCGCCAAATTGATATGGAA+TGG + chr8.3:69117621-69117640 MS.gene046353:CDS 35.0%
! ACACAGTAGTACTAGTCTAT+AGG - chr8.3:69116492-69116511 None:intergenic 35.0%
! ACTTTTTATCCGGGAAATTG+TGG + chr8.3:69116196-69116215 MS.gene046353:intron 35.0%
! GAGTTAATTTTGCATCAGGA+GGG + chr8.3:69116632-69116651 MS.gene046353:CDS 35.0%
! TTAGACTTTGGGAGAATATG+TGG - chr8.3:69116007-69116026 None:intergenic 35.0%
!! CAATACAAGCATTGGTAATC+AGG + chr8.3:69115657-69115676 MS.gene046353:CDS 35.0%
!! TATTGATTCGTTGTTTCTCC+CGG - chr8.3:69115906-69115925 None:intergenic 35.0%
AAAGCTAGAGAACCAGCTAA+AGG + chr8.3:69117296-69117315 MS.gene046353:CDS 40.0%
AAGCTAGAGAACCAGCTAAA+GGG + chr8.3:69117297-69117316 MS.gene046353:CDS 40.0%
ACATCACTACCACAATTTCC+CGG - chr8.3:69116208-69116227 None:intergenic 40.0%
CAATGACTATGGTAGTCTTC+TGG + chr8.3:69116928-69116947 MS.gene046353:CDS 40.0%
CGTCAGAAAATCTACCAGAA+GGG - chr8.3:69115720-69115739 None:intergenic 40.0%
CTATAGGACAAATCCTGTTC+AGG - chr8.3:69116476-69116495 None:intergenic 40.0%
CTCCATAACCATAAGAGAGA+GGG + chr8.3:69115979-69115998 MS.gene046353:intron 40.0%
CTCCTAACAATTATGTAGGG+AGG - chr8.3:69115871-69115890 None:intergenic 40.0%
GACCTAGGTGGAAGAAAATT+TGG + chr8.3:69117138-69117157 MS.gene046353:CDS 40.0%
GGTCACCCTGAATATATCTA+TGG + chr8.3:69116610-69116629 MS.gene046353:CDS 40.0%
TAGATATATTCAGGGTGACC+TGG - chr8.3:69116610-69116629 None:intergenic 40.0%
! ACCCAAATTTTCTTCCACCT+AGG - chr8.3:69117143-69117162 None:intergenic 40.0%
! AGTGTTGGAAGCAATGACTA+TGG + chr8.3:69116917-69116936 MS.gene046353:CDS 40.0%
! CCTTCTGGTAGATTTTCTGA+CGG + chr8.3:69115718-69115737 MS.gene046353:CDS 40.0%
! CGCATGATACCAGATTTTGT+TGG + chr8.3:69115742-69115761 MS.gene046353:CDS 40.0%
! GGAGTTAATTTTGCATCAGG+AGG + chr8.3:69116631-69116650 MS.gene046353:CDS 40.0%
! TGCAAATATGGTGGAAGTAG+AGG - chr8.3:69116586-69116605 None:intergenic 40.0%
! TTGCTTAATTTGGGTCCGTT+TGG + chr8.3:69117162-69117181 MS.gene046353:CDS 40.0%
AAGAAAGTCTGTCCATAGGG+AGG - chr8.3:69115691-69115710 None:intergenic 45.0%
AGCTAGAGAACCAGCTAAAG+GGG + chr8.3:69117298-69117317 MS.gene046353:CDS 45.0%
AGTCTTCTGGATCCAAACTC+TGG + chr8.3:69116941-69116960 MS.gene046353:CDS 45.0%
AGTGTAGCATGTTGTGGAAG+TGG + chr8.3:69117504-69117523 MS.gene046353:CDS 45.0%
ATGCTAGGATAGCAGCCAAA+CGG - chr8.3:69117180-69117199 None:intergenic 45.0%
ATGGAAATGGCAGTGTCACA+TGG + chr8.3:69117640-69117659 MS.gene046353:CDS 45.0%
CACATGATGTTGTCGAGTGA+CGG + chr8.3:69116266-69116285 MS.gene046353:intron 45.0%
CAGGCAAATTATCCTCCCTA+TGG + chr8.3:69115676-69115695 MS.gene046353:CDS 45.0%
CCGTCAGAAAATCTACCAGA+AGG - chr8.3:69115721-69115740 None:intergenic 45.0%
CTTCCACCATATTTGCATCC+AGG + chr8.3:69116589-69116608 MS.gene046353:CDS 45.0%
GAAGCAAGTGTAGCATGTTG+TGG + chr8.3:69117498-69117517 MS.gene046353:CDS 45.0%
GCACTCTCTCAAACATCTCA+AGG + chr8.3:69116661-69116680 MS.gene046353:CDS 45.0%
GCTCCATAACCATAAGAGAG+AGG + chr8.3:69115978-69115997 MS.gene046353:intron 45.0%
GGTAGAAGAACACCAGAGTT+TGG - chr8.3:69116956-69116975 None:intergenic 45.0%
TGACCTGGATGCAAATATGG+TGG - chr8.3:69116595-69116614 None:intergenic 45.0%
! AATTTTGCATCAGGAGGGTC+TGG + chr8.3:69116637-69116656 MS.gene046353:CDS 45.0%
! GAGTGACGGAACTTAGCAAA+GGG + chr8.3:69116280-69116299 MS.gene046353:intron 45.0%
CGCCCTCTCTCTTATGGTTA+TGG - chr8.3:69115984-69116003 None:intergenic 50.0%
CGTCACTCGACAACATCATG+TGG - chr8.3:69116268-69116287 None:intergenic 50.0%
GGGTGACCTGGATGCAAATA+TGG - chr8.3:69116598-69116617 None:intergenic 50.0%
TGGTGGAAGTAGAGGCAACT+TGG - chr8.3:69116578-69116597 None:intergenic 50.0%
TTAGGAGTCTGAGGGAGTTC+CGG + chr8.3:69115884-69115903 MS.gene046353:intron 50.0%
! CGAGTGACGGAACTTAGCAA+AGG + chr8.3:69116279-69116298 MS.gene046353:intron 50.0%
ATGTGGCGCCCTCTCTCTTA+TGG - chr8.3:69115990-69116009 None:intergenic 55.0%
GCATGTTGTGGAAGTGGCTG+TGG + chr8.3:69117510-69117529 MS.gene046353:CDS 55.0%
GTTGTGGAAGTGGCTGTGGA+GGG + chr8.3:69117514-69117533 MS.gene046353:CDS 55.0%
TAGGAGTCTGAGGGAGTTCC+GGG + chr8.3:69115885-69115904 MS.gene046353:intron 55.0%
TGTTGTGGAAGTGGCTGTGG+AGG + chr8.3:69117513-69117532 MS.gene046353:CDS 55.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 69115571 69117695 69115571 ID=MS.gene046353
chr8.3 mRNA 69115571 69117695 69115571 ID=MS.gene046353.t1;Parent=MS.gene046353
chr8.3 exon 69115571 69115763 69115571 ID=MS.gene046353.t1.exon1;Parent=MS.gene046353.t1
chr8.3 CDS 69115571 69115763 69115571 ID=cds.MS.gene046353.t1;Parent=MS.gene046353.t1
chr8.3 exon 69116566 69116687 69116566 ID=MS.gene046353.t1.exon2;Parent=MS.gene046353.t1
chr8.3 CDS 69116566 69116687 69116566 ID=cds.MS.gene046353.t1;Parent=MS.gene046353.t1
chr8.3 exon 69116803 69117033 69116803 ID=MS.gene046353.t1.exon3;Parent=MS.gene046353.t1
chr8.3 CDS 69116803 69117033 69116803 ID=cds.MS.gene046353.t1;Parent=MS.gene046353.t1
chr8.3 exon 69117129 69117387 69117129 ID=MS.gene046353.t1.exon4;Parent=MS.gene046353.t1
chr8.3 CDS 69117129 69117387 69117129 ID=cds.MS.gene046353.t1;Parent=MS.gene046353.t1
chr8.3 exon 69117490 69117695 69117490 ID=MS.gene046353.t1.exon5;Parent=MS.gene046353.t1
chr8.3 CDS 69117490 69117695 69117490 ID=cds.MS.gene046353.t1;Parent=MS.gene046353.t1
Gene Sequence

>MS.gene046353

ATGATCATGAATTGCTTGCCTAAGAAACATGGTGCACTATTCATATTTGGAGATTCACTATTTGATAATGGTAACAACAACTACATCAATACAAGCATTGGTAATCAGGCAAATTATCCTCCCTATGGACAGACTTTCTTTAAGTACCCTTCTGGTAGATTTTCTGACGGACGCATGATACCAGATTTTGTTGGTACGATTTTTCCAATTTTTTTTTTTCAAAACATATGTTTATTTTTTTTTAGGGGAAAACATATGTTTATTTTATTGTGTAGTTAGTATATAGATTCAAATTATCCTCCCTACATAATTGTTAGGAGTCTGAGGGAGTTCCGGGAGAAACAACGAATCAATATATCTCGATAACAAGAGAGAGGGAGAGAGATAACACATCTCTACTCAATTTTGCTCCATAACCATAAGAGAGAGGGCGCCACATATTCTCCCAAAGTCTAAGATGATTTTTCTTTCATTCCGTCACTTTTTTTAGGAGTTCTCATTCCGCCACATGATATACTAGAGATTACATAGATTGTTACATTTTCATTTAACGTGTTGCATGATGTAGTCTAATTAAGGAACTTAGCTATGACATTAACTTTCTATCCTTCTTTAAAAAAAGTTAACTTTTTATCCGGGAAATTGTGGTAGTGATGTAGAGATTACTTAGATTGTAACATTTTCATTTAACGTACCACATGATGTTGTCGAGTGACGGAACTTAGCAAAGGGACCATTTTGATTAGAGTGTTACAATGTTGTAGACAAGATTGTTAATTCGTAAAAGTGAAAAACGAATTTAACTGACAATTATCATTTCAAGAAAAATGAAAATACAAATAAATTTCGTCGCTAAATTTAGCTATGAGAAACAACATATGCACTATATGATTGTCAAAAAACCTGAACAGGATTTGTCCTATAGACTAGTACTACTGTGTCCTTGATTTCTAAGAAAACAAAAACATAACAAAATAGTTGTCTAATTTTTTCAGCTGAGTATGCCAAGTTGCCTCTACTTCCACCATATTTGCATCCAGGTCACCCTGAATATATCTATGGAGTTAATTTTGCATCAGGAGGGTCTGGTGCACTCTCTCAAACATCTCAAGGAAGTGTAAGCTCATCTTTAAATTCATTGAATATCTTTTTCTACCTCTAAAATGAAAACTATATTTATAGTATATACTAATATAAACATTATCTGAACTTCGATTGTTGTTAACATATAGGTGATAGACCTGAAAACTCAGTTGAGTTATTTAAAAAAGGTAAAGAATTTATTCAGGGAGAAATTGGGACATGAAAAAACAAAAGAACTGTTGTCCAAATCTGTATACTTGTTTAGTGTTGGAAGCAATGACTATGGTAGTCTTCTGGATCCAAACTCTGGTGTTCTTCTACCTGTTGATCATCAACAATTTGTTGATATTGTCATTGGAAACCTCACAAATGTCATCAAAGTATGTAAAGTTTTATAAGCCTTGATTTTTTTGTGCTAACAATAGATATGATATTAATTTTGTGCTAACAATATATATGATATGTTTATTTGTAGGAAATTTATGACCTAGGTGGAAGAAAATTTGGGTTGCTTAATTTGGGTCCGTTTGGCTGCTATCCTAGCATAAGAATATTGGTTAATAATGGAACAGAAGGTGAATGCATAAATGAAATTTCAGCAGTGGCAAGACTACACAACAATAAACTCACAAAAATGCTTCAAAAGCTAGAGAACCAGCTAAAGGGGTTCAAATATTCAATCAATGATTTCTACAGTGCATTTTCTGAAGTGATGAAGTATCCTTCAAACTATGGTACACATTCATGAAAAAATATTAATTATTATGTAGTGAGTTTTATGTGTGAGCATATATACTAATCATTGTTAATTTTATGTTTGATAAATTTTTGGGAAGGCTTTAAAGAAGCAAGTGTAGCATGTTGTGGAAGTGGCTGTGGAGGGAACAAAGAATATGAGTTATGTGACAATGTGAATGAACATGTATTCTTTGACACTCATCATCCTACAGAGAAAGCTAATCAATATTTCGCCAAATTGATATGGAATGGAAATGGCAGTGTCACATGGCCTTACAATCTAAAGCAGCTATTTGAAATTTGA
Protein sequence

>MS.gene046353.t1

MIMNCLPKKHGALFIFGDSLFDNGNNNYINTSIGNQANYPPYGQTFFKYPSGRFSDGRMIPDFVAEYAKLPLLPPYLHPGHPEYIYGVNFASGGSGALSQTSQGSVIDLKTQLSYLKKVKNLFREKLGHEKTKELLSKSVYLFSVGSNDYGSLLDPNSGVLLPVDHQQFVDIVIGNLTNVIKEIYDLGGRKFGLLNLGPFGCYPSIRILVNNGTEGECINEISAVARLHNNKLTKMLQKLENQLKGFKYSINDFYSAFSEVMKYPSNYGFKEASVACCGSGCGGNKEYELCDNVNEHVFFDTHHPTEKANQYFAKLIWNGNGSVTWPYNLKQLFEI