AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene25063

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25063.t1 MTR_8g022790 97.619 336 8 0 1 336 26 361 0.0 679
MS.gene25063.t1 MTR_8g031420 56.305 341 133 4 5 335 28 362 8.56e-139 398
MS.gene25063.t1 MTR_8g031430 56.305 341 133 4 5 335 30 364 1.38e-135 390
MS.gene25063.t1 MTR_8g031390 55.030 338 135 5 5 332 30 360 5.53e-128 371
MS.gene25063.t1 MTR_8g031400 52.786 341 145 4 5 335 30 364 1.44e-127 369
MS.gene25063.t1 MTR_8g022810 49.706 340 158 4 8 335 37 375 2.03e-114 337
MS.gene25063.t1 MTR_8g031390 56.207 290 113 4 5 287 30 312 1.72e-110 324
MS.gene25063.t1 MTR_2g044100 50.898 334 152 4 12 334 43 375 1.94e-109 325
MS.gene25063.t1 MTR_8g022810 43.529 340 126 5 8 335 37 322 5.18e-87 265
MS.gene25063.t1 MTR_3g005650 34.835 333 204 5 12 336 30 357 1.26e-59 195
MS.gene25063.t1 MTR_5g022630 34.375 320 196 7 12 319 43 360 1.50e-57 190
MS.gene25063.t1 MTR_8g079050 34.971 346 200 11 11 336 36 376 6.31e-57 189
MS.gene25063.t1 MTR_5g093090 33.728 338 202 7 12 333 28 359 1.26e-56 188
MS.gene25063.t1 MTR_8g075230 35.714 322 187 8 12 319 36 351 5.56e-56 186
MS.gene25063.t1 MTR_8g074570 34.682 346 196 10 8 333 34 369 1.12e-55 186
MS.gene25063.t1 MTR_8g014910 35.168 327 196 8 12 325 32 355 2.52e-55 184
MS.gene25063.t1 MTR_2g033930 33.918 342 197 10 12 335 32 362 9.17e-55 183
MS.gene25063.t1 MTR_3g052490 33.621 348 203 10 8 336 28 366 1.17e-53 180
MS.gene25063.t1 MTR_1g079530 34.111 343 192 13 12 336 29 355 2.36e-53 179
MS.gene25063.t1 MTR_2g033920 33.529 340 209 9 9 335 32 367 1.13e-52 177
MS.gene25063.t1 MTR_7g116520 32.448 339 209 8 12 336 34 366 1.43e-52 177
MS.gene25063.t1 MTR_3g464730 34.891 321 188 10 9 314 25 339 1.95e-52 177
MS.gene25063.t1 MTR_5g084770 33.762 311 193 6 12 311 28 336 2.42e-52 176
MS.gene25063.t1 MTR_3g082830 35.535 318 183 10 12 314 38 348 2.79e-52 176
MS.gene25063.t1 MTR_3g052480 33.333 351 201 10 8 336 29 368 9.17e-52 175
MS.gene25063.t1 MTR_2g084585 34.395 314 192 6 12 314 30 340 1.23e-51 174
MS.gene25063.t1 MTR_8g074580 31.865 386 194 11 8 333 40 416 1.87e-51 176
MS.gene25063.t1 MTR_2g461580 31.765 340 205 8 5 333 24 347 1.94e-51 174
MS.gene25063.t1 MTR_4g087985 34.154 325 181 11 9 309 33 348 3.74e-51 174
MS.gene25063.t1 MTR_5g022640 32.812 320 200 7 12 319 43 359 4.67e-51 173
MS.gene25063.t1 MTR_4g035353 30.946 349 223 8 1 336 20 363 2.84e-50 171
MS.gene25063.t1 MTR_4g122200 32.749 342 203 11 12 335 35 367 3.31e-50 171
MS.gene25063.t1 MTR_2g100620 33.851 322 197 8 12 320 31 349 4.70e-50 171
MS.gene25063.t1 MTR_7g116570 31.176 340 218 7 9 336 31 366 5.03e-50 171
MS.gene25063.t1 MTR_5g084790 35.474 327 195 8 3 317 23 345 5.03e-50 171
MS.gene25063.t1 MTR_1g069175 31.014 345 208 12 12 336 33 367 8.20e-50 170
MS.gene25063.t1 MTR_3g052580 31.503 346 212 9 8 336 24 361 8.96e-50 171
MS.gene25063.t1 MTR_3g052580 31.503 346 212 9 8 336 23 360 1.39e-49 171
MS.gene25063.t1 MTR_4g056160 36.164 318 184 8 12 314 27 340 2.84e-49 168
MS.gene25063.t1 MTR_3g435540 32.907 313 194 7 14 314 25 333 3.13e-49 169
MS.gene25063.t1 MTR_5g074270 33.851 322 199 7 6 315 27 346 5.00e-49 168
MS.gene25063.t1 MTR_1g025760 35.161 310 181 11 12 307 80 383 6.99e-49 169
MS.gene25063.t1 MTR_5g084750 32.716 324 199 10 1 310 18 336 9.70e-49 167
MS.gene25063.t1 MTR_5g078210 33.439 314 191 9 14 315 27 334 9.73e-49 167
MS.gene25063.t1 MTR_3g021460 32.530 332 199 8 12 333 31 347 1.25e-48 167
MS.gene25063.t1 MTR_3g098270 33.432 338 208 7 12 335 34 368 2.21e-48 167
MS.gene25063.t1 MTR_3g024510 32.537 335 210 9 14 336 40 370 2.66e-48 166
MS.gene25063.t1 MTR_1g024890 31.563 339 212 8 12 336 32 364 5.21e-48 166
MS.gene25063.t1 MTR_2g015080 34.049 326 188 10 6 309 32 352 6.26e-48 165
MS.gene25063.t1 MTR_0009s0250 34.062 320 182 11 8 314 29 332 7.69e-48 164
MS.gene25063.t1 MTR_0565s0010 32.153 339 207 11 14 336 34 365 7.81e-48 165
MS.gene25063.t1 MTR_2g017925 35.329 334 194 11 12 335 33 354 9.27e-48 165
MS.gene25063.t1 MTR_3g114090 34.416 308 190 8 12 309 36 341 1.16e-47 164
MS.gene25063.t1 MTR_1g025780 35.161 310 183 9 12 309 41 344 1.77e-47 164
MS.gene25063.t1 MTR_7g116510 29.885 348 225 8 3 336 16 358 3.48e-47 163
MS.gene25063.t1 MTR_1g079540 31.105 344 215 9 7 336 28 363 3.99e-47 163
MS.gene25063.t1 MTR_4g108690 31.949 313 197 7 14 314 29 337 4.13e-47 163
MS.gene25063.t1 MTR_7g008060 32.047 337 202 10 9 334 30 350 8.09e-47 162
MS.gene25063.t1 MTR_1g025680 34.516 310 187 9 12 309 34 339 8.26e-46 162
MS.gene25063.t1 MTR_4g056280 35.048 311 188 6 12 311 30 337 9.41e-46 159
MS.gene25063.t1 MTR_7g116500 30.294 340 211 9 12 334 33 363 9.89e-46 159
MS.gene25063.t1 MTR_6g021530 30.357 336 217 7 14 336 31 362 8.18e-45 157
MS.gene25063.t1 MTR_8g075220 30.061 326 205 9 12 319 40 360 1.73e-44 156
MS.gene25063.t1 MTR_1g025720 32.177 317 198 9 12 316 37 348 2.74e-44 155
MS.gene25063.t1 MTR_5g009100 32.544 338 201 13 14 333 48 376 2.89e-44 156
MS.gene25063.t1 MTR_7g116870 32.571 350 181 11 12 323 33 365 4.50e-44 155
MS.gene25063.t1 MTR_2g017955 34.125 337 199 12 12 335 33 359 8.00e-44 155
MS.gene25063.t1 MTR_1g025700 33.117 308 193 8 12 309 50 354 2.14e-43 153
MS.gene25063.t1 MTR_4g019880 30.409 342 214 10 12 336 32 366 2.27e-43 153
MS.gene25063.t1 MTR_3g023220 32.335 334 202 11 12 335 33 352 5.18e-43 152
MS.gene25063.t1 MTR_3g114120 32.704 318 197 8 12 317 47 359 1.24e-42 151
MS.gene25063.t1 MTR_8g074560 30.484 351 209 12 9 335 28 367 2.17e-42 150
MS.gene25063.t1 MTR_8g075200 29.653 317 209 7 12 317 41 354 3.03e-42 151
MS.gene25063.t1 MTR_8g028160 31.579 361 197 9 13 336 37 384 7.05e-42 150
MS.gene25063.t1 MTR_8g087890 30.499 341 209 11 14 336 33 363 8.01e-42 149
MS.gene25063.t1 MTR_8g087870 31.437 334 209 9 12 336 29 351 1.22e-41 148
MS.gene25063.t1 MTR_2g017875 31.378 341 205 12 12 336 34 361 9.09e-41 146
MS.gene25063.t1 MTR_1g025910 29.412 306 200 8 17 311 41 341 1.09e-40 146
MS.gene25063.t1 MTR_2g017965 30.473 338 209 11 13 335 34 360 1.74e-38 140
MS.gene25063.t1 MTR_3g005660 29.464 336 217 9 13 333 37 367 2.03e-38 140
MS.gene25063.t1 MTR_5g093090 32.714 269 164 6 12 269 28 290 2.08e-37 136
MS.gene25063.t1 MTR_2g015590 31.065 338 200 10 10 320 29 360 7.88e-37 136
MS.gene25063.t1 MTR_7g033155 27.945 365 206 8 7 323 33 388 1.25e-36 136
MS.gene25063.t1 MTR_7g087190 31.700 347 194 11 12 323 43 381 1.44e-36 136
MS.gene25063.t1 MTR_2g033920 34.328 268 165 8 9 269 32 295 2.26e-36 133
MS.gene25063.t1 MTR_5g078210 32.443 262 167 7 14 269 27 284 8.94e-36 132
MS.gene25063.t1 MTR_1g030220 31.897 348 182 10 12 320 40 371 9.29e-36 134
MS.gene25063.t1 MTR_7g113860 30.000 350 187 10 12 320 29 361 1.26e-35 133
MS.gene25063.t1 MTR_8g089805 29.480 346 196 10 12 320 40 374 1.15e-34 130
MS.gene25063.t1 MTR_5g083040 29.560 318 201 10 9 308 29 341 1.44e-34 130
MS.gene25063.t1 MTR_1g092750 29.179 329 196 9 13 324 41 349 2.58e-34 129
MS.gene25063.t1 MTR_7g111780 30.488 328 199 9 8 317 32 348 3.57e-34 129
MS.gene25063.t1 MTR_7g104220 34.185 313 167 16 13 307 43 334 4.44e-34 128
MS.gene25063.t1 MTR_7g113860 29.714 350 188 11 12 320 35 367 4.91e-34 129
MS.gene25063.t1 MTR_1g030275 29.912 341 196 8 12 320 39 368 5.59e-34 129
MS.gene25063.t1 MTR_7g033150 27.809 356 197 9 12 323 35 374 1.63e-33 127
MS.gene25063.t1 MTR_2g017915 29.674 337 191 11 13 335 34 338 1.57e-32 124
MS.gene25063.t1 MTR_1g092690 28.923 325 184 11 8 307 39 341 1.73e-32 124
MS.gene25063.t1 MTR_1g092760 30.696 316 183 11 8 307 35 330 1.89e-32 124
MS.gene25063.t1 MTR_1g030268 31.195 343 189 11 12 320 40 369 5.32e-32 123
MS.gene25063.t1 MTR_2g015630 29.565 345 203 11 17 333 36 368 5.46e-32 123
MS.gene25063.t1 MTR_5g087690 28.037 321 207 8 12 319 50 359 1.08e-31 122
MS.gene25063.t1 MTR_1g082390 29.086 361 207 11 1 325 20 367 3.00e-31 121
MS.gene25063.t1 MTR_2g015650 28.977 352 214 11 1 324 20 363 3.27e-31 121
MS.gene25063.t1 MTR_1g060500 31.546 317 177 12 13 307 41 339 5.60e-31 120
MS.gene25063.t1 MTR_1g060490 29.773 309 185 12 13 307 38 328 6.23e-31 120
MS.gene25063.t1 MTR_7g033165 30.347 346 193 11 12 321 33 366 7.69e-31 120
MS.gene25063.t1 MTR_4g104240 26.126 333 217 6 13 323 40 365 1.09e-30 120
MS.gene25063.t1 MTR_2g087292 29.167 312 141 9 7 314 28 263 1.20e-30 117
MS.gene25063.t1 MTR_1g030340 30.058 346 192 10 12 320 42 374 2.13e-30 119
MS.gene25063.t1 MTR_1g030230 29.446 343 197 9 12 320 32 363 2.97e-30 119
MS.gene25063.t1 MTR_6g007090 27.778 342 211 7 9 323 36 368 4.21e-30 118
MS.gene25063.t1 MTR_6g007100 30.357 336 193 13 12 323 33 351 6.21e-30 117
MS.gene25063.t1 MTR_2g015580 28.986 345 209 10 8 324 43 379 6.74e-30 118
MS.gene25063.t1 MTR_6g007095 30.233 344 194 10 12 323 41 370 1.02e-29 120
MS.gene25063.t1 MTR_6g007095 27.181 298 199 5 40 323 393 686 1.34e-24 105
MS.gene25063.t1 MTR_2g043980 30.769 338 194 12 4 320 28 346 1.26e-29 116
MS.gene25063.t1 MTR_2g015590 31.408 277 167 8 10 269 29 299 8.58e-28 111
MS.gene25063.t1 MTR_2g015670 28.571 350 204 11 1 324 20 349 1.72e-27 110
MS.gene25063.t1 MTR_2g079080 27.893 337 215 11 1 320 19 344 8.59e-27 108
MS.gene25063.t1 MTR_2g017925 33.333 240 143 8 103 335 22 251 8.98e-27 107
MS.gene25063.t1 MTR_2g079090 27.893 337 215 11 1 320 19 344 1.26e-26 108
MS.gene25063.t1 MTR_0029s0050 27.893 337 215 11 1 320 19 344 1.28e-26 108
MS.gene25063.t1 MTR_0029s0100 27.893 337 215 11 1 320 19 344 3.24e-26 107
MS.gene25063.t1 MTR_1g092740 27.885 312 187 9 13 307 39 329 1.42e-25 105
MS.gene25063.t1 MTR_8g038680 26.331 357 220 10 1 323 15 362 6.20e-25 103
MS.gene25063.t1 MTR_7g033165 31.343 268 150 8 12 257 33 288 1.06e-24 102
MS.gene25063.t1 MTR_3g448360 26.912 353 213 13 1 321 18 357 1.28e-24 103
MS.gene25063.t1 MTR_3g463930 27.298 359 203 16 4 320 38 380 1.36e-24 103
MS.gene25063.t1 MTR_1g030268 31.408 277 158 8 12 269 40 303 1.74e-24 102
MS.gene25063.t1 MTR_3g463960 26.836 354 204 15 4 320 38 373 1.98e-24 102
MS.gene25063.t1 MTR_3g463950 26.836 354 204 15 4 320 38 373 1.98e-24 102
MS.gene25063.t1 MTR_3g463970 26.836 354 204 15 4 320 38 373 1.98e-24 102
MS.gene25063.t1 MTR_3g463940 26.836 354 204 15 4 320 38 373 1.98e-24 102
MS.gene25063.t1 MTR_0127s0040 28.689 244 157 8 104 336 1 238 6.32e-24 98.6
MS.gene25063.t1 MTR_1g079590 33.880 183 112 5 12 187 31 211 2.74e-22 93.6
MS.gene25063.t1 MTR_3g069780 28.448 348 211 13 1 320 19 356 3.45e-22 96.3
MS.gene25063.t1 MTR_3g438030 28.448 348 211 13 1 320 19 356 6.92e-22 95.5
MS.gene25063.t1 MTR_1g060520 27.215 316 156 12 13 307 41 303 2.23e-21 93.2
MS.gene25063.t1 MTR_7g111780 29.435 248 151 6 87 317 9 249 2.26e-21 92.0
MS.gene25063.t1 MTR_1108s0010 29.187 209 124 4 112 311 3 196 2.69e-21 90.9
MS.gene25063.t1 MTR_7g113860 26.756 299 165 9 63 320 8 293 1.74e-20 90.5
MS.gene25063.t1 MTR_3g069520 27.119 354 208 13 1 321 19 355 1.80e-20 91.3
MS.gene25063.t1 MTR_8g012540 25.000 308 203 7 1 288 15 314 4.60e-20 90.1
MS.gene25063.t1 MTR_5g093090 33.898 177 104 5 12 177 28 202 8.37e-20 86.7
MS.gene25063.t1 MTR_5g074210 33.099 142 88 3 180 315 62 202 1.29e-19 86.3
MS.gene25063.t1 MTR_8g089805 25.667 300 180 8 58 320 13 306 2.88e-19 87.4
MS.gene25063.t1 MTR_2g018015 34.653 202 113 8 12 201 36 230 1.04e-18 85.5
MS.gene25063.t1 MTR_1g030265 26.621 293 169 8 65 320 53 336 1.29e-18 85.9
MS.gene25063.t1 MTR_2g043990 29.825 285 145 10 4 269 90 338 8.96e-17 80.5
MS.gene25063.t1 MTR_4g036375 34.483 145 88 4 12 151 30 172 4.84e-16 75.9
MS.gene25063.t1 MTR_6g049230 40.541 111 63 2 171 281 63 170 8.43e-16 75.1
MS.gene25063.t1 MTR_4g036385 35.922 103 60 1 217 313 21 123 2.36e-14 69.7
MS.gene25063.t1 MTR_2g017895 24.101 278 171 12 72 336 17 267 2.50e-13 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25063.t1 AT1G53920 51.176 340 148 6 12 336 48 384 3.27e-120 352
MS.gene25063.t1 AT5G40990 49.711 346 160 4 4 336 29 373 6.19e-120 350
MS.gene25063.t1 AT1G53940 48.837 344 162 4 6 336 33 375 2.24e-114 336
MS.gene25063.t1 AT3G14225 45.930 344 172 4 6 336 31 373 3.94e-108 320
MS.gene25063.t1 AT3G14225 45.690 348 171 5 6 336 31 377 4.08e-107 318
MS.gene25063.t1 AT1G53990 45.954 346 166 5 4 336 27 364 5.21e-103 307
MS.gene25063.t1 AT1G53940 48.507 268 135 2 6 271 33 299 3.31e-86 262
MS.gene25063.t1 AT1G71120 33.531 337 197 7 12 333 31 355 7.77e-61 199
MS.gene25063.t1 AT5G08460 33.828 337 205 9 12 333 49 382 8.16e-56 186
MS.gene25063.t1 AT2G04570 35.650 331 193 9 12 330 28 350 1.20e-55 185
MS.gene25063.t1 AT1G54030 34.557 327 191 10 13 334 53 361 2.65e-55 186
MS.gene25063.t1 AT4G26790 35.938 320 185 10 9 314 26 339 1.06e-54 182
MS.gene25063.t1 AT4G26790 35.938 320 185 10 9 314 26 339 1.06e-54 182
MS.gene25063.t1 AT5G41890 35.838 346 190 12 14 333 33 372 9.67e-54 181
MS.gene25063.t1 AT1G71691 33.837 331 205 6 12 333 55 380 8.22e-53 179
MS.gene25063.t1 AT1G20132 32.817 323 201 8 8 318 57 375 8.64e-53 178
MS.gene25063.t1 AT3G14820 36.859 312 177 10 12 311 32 335 2.64e-52 176
MS.gene25063.t1 AT5G45960 37.195 328 176 14 8 314 41 359 2.74e-52 177
MS.gene25063.t1 AT5G15720 32.544 338 212 7 12 336 30 364 3.85e-52 176
MS.gene25063.t1 AT1G20120 34.347 329 189 11 12 322 78 397 4.81e-52 177
MS.gene25063.t1 AT2G23540 33.811 349 200 12 11 336 47 387 7.67e-52 176
MS.gene25063.t1 AT1G06990 35.032 314 181 12 12 309 37 343 9.67e-52 175
MS.gene25063.t1 AT3G50400 33.807 352 203 13 8 336 30 374 3.11e-51 174
MS.gene25063.t1 AT5G42170 33.438 320 193 10 13 319 51 363 1.40e-50 172
MS.gene25063.t1 AT2G40250 33.542 319 192 11 12 314 36 350 1.04e-48 167
MS.gene25063.t1 AT5G45950 31.595 326 203 10 2 315 28 345 1.10e-48 167
MS.gene25063.t1 AT2G42990 33.229 319 189 10 9 311 25 335 1.20e-48 167
MS.gene25063.t1 AT5G37690 32.907 313 192 8 14 314 29 335 1.84e-48 166
MS.gene25063.t1 AT3G53100 32.492 317 194 9 12 314 29 339 2.66e-48 166
MS.gene25063.t1 AT5G33370 31.858 339 211 8 12 336 30 362 5.26e-48 166
MS.gene25063.t1 AT1G29660 33.036 336 207 10 14 336 34 364 6.82e-48 165
MS.gene25063.t1 AT5G03820 33.962 318 190 10 12 314 33 345 8.20e-48 165
MS.gene25063.t1 AT3G16370 32.919 322 193 10 12 317 30 344 1.47e-47 164
MS.gene25063.t1 AT5G22810 34.700 317 190 8 12 314 34 347 3.33e-47 163
MS.gene25063.t1 AT5G03820 33.962 318 190 10 12 314 61 373 3.67e-47 164
MS.gene25063.t1 AT4G28780 29.586 338 220 8 12 336 31 363 1.60e-46 162
MS.gene25063.t1 AT1G75890 32.609 322 199 9 12 317 47 366 1.70e-46 161
MS.gene25063.t1 AT1G20130 32.317 328 193 11 12 317 184 504 2.11e-46 164
MS.gene25063.t1 AT1G20130 32.317 328 193 11 12 317 204 524 3.06e-46 164
MS.gene25063.t1 AT1G75890 32.609 322 199 9 12 317 76 395 3.26e-46 161
MS.gene25063.t1 AT1G20135 33.438 317 190 10 3 309 17 322 4.74e-46 159
MS.gene25063.t1 AT3G14210 32.440 336 198 11 12 333 36 356 8.94e-46 160
MS.gene25063.t1 AT1G54010 31.642 335 198 12 13 333 37 354 2.00e-45 159
MS.gene25063.t1 AT3G04290 30.267 337 215 8 9 331 26 356 2.45e-45 159
MS.gene25063.t1 AT1G54000 32.036 334 200 11 12 333 36 354 2.47e-45 159
MS.gene25063.t1 AT1G58430 32.609 322 195 10 12 317 35 350 3.66e-45 158
MS.gene25063.t1 AT1G75890 31.343 335 199 9 12 317 47 379 5.94e-45 158
MS.gene25063.t1 AT5G03810 31.962 316 198 7 12 314 30 341 7.09e-45 157
MS.gene25063.t1 AT5G18430 31.487 343 209 10 12 336 28 362 7.12e-45 157
MS.gene25063.t1 AT1G74460 31.962 316 199 7 14 317 25 336 8.04e-45 157
MS.gene25063.t1 AT1G59406 32.692 312 191 10 12 311 30 334 1.06e-44 156
MS.gene25063.t1 AT1G59030 32.692 312 191 10 12 311 30 334 1.06e-44 156
MS.gene25063.t1 AT1G58725 32.692 312 191 10 12 311 30 334 1.06e-44 156
MS.gene25063.t1 AT1G71250 30.357 336 214 8 12 333 41 370 1.33e-44 157
MS.gene25063.t1 AT5G37690 32.803 314 183 10 14 314 29 327 7.85e-44 154
MS.gene25063.t1 AT1G54020 31.928 332 198 12 13 334 34 347 1.22e-43 154
MS.gene25063.t1 AT5G63170 32.803 314 175 13 12 309 28 321 1.42e-43 153
MS.gene25063.t1 AT2G19050 30.564 337 200 10 14 336 33 349 1.48e-43 153
MS.gene25063.t1 AT2G19060 32.099 324 184 12 14 320 32 336 1.66e-43 153
MS.gene25063.t1 AT1G75900 30.960 323 200 9 12 319 43 357 5.79e-43 152
MS.gene25063.t1 AT3G14220 31.045 335 200 14 13 333 33 350 6.49e-43 152
MS.gene25063.t1 AT5G55050 32.558 344 199 13 13 333 40 373 1.05e-42 152
MS.gene25063.t1 AT1G28640 30.904 343 200 10 8 321 31 365 2.09e-42 151
MS.gene25063.t1 AT5G45670 30.612 343 201 10 14 333 31 359 2.79e-42 150
MS.gene25063.t1 AT4G18970 31.214 346 201 11 14 336 30 361 3.26e-42 150
MS.gene25063.t1 AT2G03980 29.781 319 198 9 12 314 43 351 6.61e-42 149
MS.gene25063.t1 AT2G03980 29.781 319 198 9 12 314 43 351 6.61e-42 149
MS.gene25063.t1 AT2G03980 29.781 319 198 9 12 314 43 351 6.61e-42 149
MS.gene25063.t1 AT2G03980 29.781 319 198 9 12 314 43 351 6.61e-42 149
MS.gene25063.t1 AT1G29670 30.678 339 212 12 13 336 33 363 7.48e-42 149
MS.gene25063.t1 AT2G30310 30.745 322 201 10 12 317 34 349 9.40e-42 149
MS.gene25063.t1 AT4G30140 30.488 328 204 10 14 333 35 346 1.15e-41 148
MS.gene25063.t1 AT4G18970 31.214 346 201 11 14 336 30 361 1.37e-41 149
MS.gene25063.t1 AT1G75880 32.288 319 200 8 12 317 52 367 2.16e-41 148
MS.gene25063.t1 AT2G30220 31.366 322 199 10 12 317 33 348 2.82e-41 147
MS.gene25063.t1 AT4G01130 31.268 355 189 10 12 327 34 372 3.98e-41 148
MS.gene25063.t1 AT4G10950 29.032 341 217 11 12 335 71 403 4.09e-41 148
MS.gene25063.t1 AT1G29670 30.678 339 212 12 13 336 101 431 4.78e-41 149
MS.gene25063.t1 AT1G75880 32.075 318 201 8 12 317 52 366 1.16e-40 146
MS.gene25063.t1 AT2G24560 31.677 322 198 10 12 317 34 349 1.29e-40 146
MS.gene25063.t1 AT1G58520 32.063 315 182 12 12 311 30 327 4.12e-40 144
MS.gene25063.t1 AT1G58525 32.063 315 182 12 12 311 30 327 4.12e-40 144
MS.gene25063.t1 AT1G54030 35.484 248 140 8 12 257 52 281 2.90e-39 141
MS.gene25063.t1 AT1G75930 34.579 321 180 12 12 317 29 334 5.53e-39 141
MS.gene25063.t1 AT1G75920 32.476 311 196 9 12 315 29 332 7.26e-39 141
MS.gene25063.t1 AT4G10950 29.326 341 212 13 12 335 71 399 8.84e-39 142
MS.gene25063.t1 AT5G15720 33.459 266 166 6 12 269 30 292 9.11e-39 140
MS.gene25063.t1 AT2G19010 29.305 331 208 10 13 333 31 345 1.94e-38 140
MS.gene25063.t1 AT1G28650 30.612 343 201 11 8 321 33 367 3.13e-38 140
MS.gene25063.t1 AT2G19010 29.217 332 209 10 12 333 60 375 5.16e-38 139
MS.gene25063.t1 AT2G31540 31.366 322 199 10 12 317 35 350 1.22e-37 138
MS.gene25063.t1 AT3G43570 30.449 312 169 11 12 311 30 305 1.49e-37 137
MS.gene25063.t1 AT1G71691 33.588 262 165 5 12 269 55 311 4.83e-37 135
MS.gene25063.t1 AT1G33811 30.655 336 215 12 13 333 35 367 5.79e-37 136
MS.gene25063.t1 AT1G71691 30.000 280 184 5 63 333 3 279 1.44e-36 133
MS.gene25063.t1 AT1G23500 32.915 319 190 13 12 320 35 339 2.29e-36 134
MS.gene25063.t1 AT2G27360 29.830 352 197 13 12 330 33 367 2.75e-36 135
MS.gene25063.t1 AT3G26430 31.792 346 188 11 12 320 31 365 6.94e-36 134
MS.gene25063.t1 AT1G75920 30.982 326 196 9 12 315 24 342 7.92e-36 133
MS.gene25063.t1 AT5G03610 32.188 320 181 11 7 308 38 339 1.02e-35 133
MS.gene25063.t1 AT1G73610 29.808 312 202 7 12 317 35 335 2.03e-35 132
MS.gene25063.t1 AT2G19050 31.746 252 149 6 14 256 33 270 2.20e-35 130
MS.gene25063.t1 AT1G75910 32.372 312 196 10 12 315 28 332 2.23e-35 132
MS.gene25063.t1 AT1G28660 30.000 340 205 11 8 320 31 364 6.38e-35 131
MS.gene25063.t1 AT1G54790 29.745 353 190 11 9 320 29 364 1.42e-34 130
MS.gene25063.t1 AT3G43550 32.319 263 167 7 12 269 30 286 2.11e-34 127
MS.gene25063.t1 AT3G09930 31.847 314 179 11 13 308 40 336 4.16e-34 128
MS.gene25063.t1 AT3G09930 31.847 314 179 11 13 308 40 336 4.16e-34 128
MS.gene25063.t1 AT1G28670 29.825 342 204 11 8 320 31 365 4.87e-34 129
MS.gene25063.t1 AT1G28580 28.529 340 210 10 8 320 33 366 5.33e-34 129
MS.gene25063.t1 AT5G15720 28.671 286 191 5 64 336 48 333 6.89e-34 127
MS.gene25063.t1 AT1G28660 30.000 340 204 12 8 320 31 363 2.00e-33 127
MS.gene25063.t1 AT5G33370 31.698 265 170 6 12 269 30 290 2.03e-33 126
MS.gene25063.t1 AT1G28600 28.994 338 202 11 12 320 31 359 8.09e-33 125
MS.gene25063.t1 AT1G28570 27.429 350 213 11 3 320 23 363 4.13e-32 124
MS.gene25063.t1 AT5G14450 29.738 343 197 9 12 320 41 373 5.96e-32 123
MS.gene25063.t1 AT1G31550 29.023 348 203 12 12 330 36 368 7.14e-32 123
MS.gene25063.t1 AT4G01130 32.258 279 154 7 12 269 34 298 7.74e-32 122
MS.gene25063.t1 AT1G28590 27.778 342 210 10 8 320 32 365 2.40e-31 122
MS.gene25063.t1 AT3G48460 28.363 342 196 12 13 321 39 364 6.24e-31 120
MS.gene25063.t1 AT1G75920 30.877 285 185 8 38 315 25 304 7.26e-31 119
MS.gene25063.t1 AT1G75920 29.545 308 178 8 12 315 29 301 7.82e-31 119
MS.gene25063.t1 AT1G67830 29.446 343 200 12 12 320 30 364 1.31e-30 119
MS.gene25063.t1 AT5G03600 30.247 324 196 8 7 319 9 313 1.42e-30 118
MS.gene25063.t1 AT5G45910 30.814 344 200 11 9 320 27 364 1.68e-30 119
MS.gene25063.t1 AT5G03600 30.990 313 186 8 7 308 44 337 2.21e-30 118
MS.gene25063.t1 AT2G24560 30.627 271 175 8 12 273 34 300 2.29e-29 115
MS.gene25063.t1 AT4G16230 37.321 209 119 8 5 204 22 227 3.63e-29 113
MS.gene25063.t1 AT3G27950 30.178 338 201 10 12 323 32 360 9.74e-29 114
MS.gene25063.t1 AT1G31550 27.954 347 205 12 12 330 36 365 2.45e-28 113
MS.gene25063.t1 AT3G62280 27.864 323 213 6 9 317 33 349 2.45e-28 113
MS.gene25063.t1 AT1G09390 29.102 323 199 8 12 314 37 349 2.83e-28 113
MS.gene25063.t1 AT1G54790 27.500 360 203 11 2 320 21 363 3.14e-28 113
MS.gene25063.t1 AT1G54020 29.151 271 167 9 73 334 7 261 3.16e-28 111
MS.gene25063.t1 AT1G54020 29.151 271 167 9 73 334 7 261 3.16e-28 111
MS.gene25063.t1 AT1G54020 29.151 271 167 9 73 334 7 261 3.16e-28 111
MS.gene25063.t1 AT3G05180 27.954 347 208 11 12 325 36 373 5.62e-28 112
MS.gene25063.t1 AT1G28610 26.513 347 213 12 12 330 31 363 1.34e-27 111
MS.gene25063.t1 AT1G56670 27.523 327 199 8 12 314 40 352 2.86e-27 110
MS.gene25063.t1 AT2G04020 35.714 210 105 8 12 206 43 237 3.39e-27 108
MS.gene25063.t1 AT4G01130 28.669 293 167 8 70 327 1 286 5.23e-27 108
MS.gene25063.t1 AT2G04020 35.714 210 105 8 12 206 43 237 1.11e-26 107
MS.gene25063.t1 AT3G14210 32.381 210 127 6 136 333 22 228 1.11e-25 103
MS.gene25063.t1 AT1G54020 30.000 210 133 5 134 334 8 212 2.97e-25 102
MS.gene25063.t1 AT1G53970 59.211 76 31 0 6 81 14 89 2.06e-24 95.9
MS.gene25063.t1 AT1G53970 59.211 76 31 0 6 81 14 89 2.06e-24 95.9
MS.gene25063.t1 AT1G54790 25.648 386 203 12 2 320 21 389 5.72e-23 99.0
MS.gene25063.t1 AT2G31550 30.244 205 123 6 114 307 4 199 4.05e-22 93.2
MS.gene25063.t1 AT3G62280 28.839 267 175 6 9 271 33 288 7.65e-21 91.3
MS.gene25063.t1 AT1G56670 27.273 275 166 8 12 269 40 297 2.49e-19 87.0
MS.gene25063.t1 AT1G28580 26.408 284 177 9 63 320 8 285 4.46e-19 86.7
MS.gene25063.t1 AT2G36325 29.283 321 183 14 9 308 44 341 9.71e-19 86.3
MS.gene25063.t1 AT1G28600 37.241 145 78 6 16 150 35 176 1.42e-17 80.9
MS.gene25063.t1 AT5G03590 26.882 279 146 8 41 308 11 242 5.41e-16 77.0
MS.gene25063.t1 AT4G16233 31.200 125 76 2 217 333 5 127 8.25e-16 73.6
MS.gene25063.t1 AT1G28610 41.573 89 47 2 16 101 35 121 1.73e-13 69.7

Find 67 sgRNAs with CRISPR-Local

Find 121 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATTTGGGTTGCTTAATT+TGG 0.083505 8.4:+71910887 MS.gene25063:CDS
GACCTAGGTGGAAGAAAATT+TGG 0.128289 8.4:+71910873 MS.gene25063:CDS
GAATTTATTCAAGGAGAAAT+TGG 0.181342 8.4:+71910582 MS.gene25063:CDS
CATGGTGCACTATTCATATT+TGG 0.201400 8.4:+71909332 MS.gene25063:CDS
ATTTCCATTCCATATCAATT+TGG 0.257049 8.4:-71911350 None:intergenic
AATATTTCGCCAAATTGATA+TGG 0.273243 8.4:+71911341 MS.gene25063:CDS
TTGCTTAATTTGGGTCCTTT+TGG 0.281909 8.4:+71910897 MS.gene25063:CDS
GGAGATTCACTATTTGATAA+TGG 0.318592 8.4:+71909353 MS.gene25063:CDS
TTAACTCCATAGATATATTC+AGG 0.319254 8.4:-71910351 None:intergenic
CAATTTGTTGATATTGTCAT+TGG 0.319994 8.4:+71910724 MS.gene25063:CDS
CAATGACTATGGTAGTCTTC+TGG 0.327833 8.4:+71910663 MS.gene25063:CDS
AATAGCTGCTTTAGATTGTA+AGG 0.329509 8.4:-71911388 None:intergenic
CAATACAAGCATTGGTAATC+AGG 0.334657 8.4:+71909391 MS.gene25063:CDS
AAATTTGGGTTGCTTAATTT+GGG 0.339152 8.4:+71910888 MS.gene25063:CDS
AATAGTGCACCATGTTTCTT+AGG 0.357221 8.4:-71909323 None:intergenic
ACTAAATAAGTATACAGATT+TGG 0.363697 8.4:-71910632 None:intergenic
GGGTGACCTGGATGCAAATA+TGG 0.373892 8.4:-71910330 None:intergenic
CTATCCTAGCATAAGAATAT+TGG 0.377524 8.4:+71910923 MS.gene25063:CDS
GGTAGAAGAACACCAGAGTT+TGG 0.379836 8.4:-71910688 None:intergenic
ATAAGAATATTGGTTAATAA+TGG 0.401415 8.4:+71910933 MS.gene25063:CDS
ATGAAGTATCCTTCAAACTA+TGG 0.406479 8.4:+71911101 MS.gene25063:CDS
ACCTAGGTGGAAGAAAATTT+GGG 0.409923 8.4:+71910874 MS.gene25063:CDS
ACAAATTGTTGATGATCAAC+AGG 0.420612 8.4:-71910709 None:intergenic
AAAATCGTACCAACAAAATC+TGG 0.421278 8.4:-71909485 None:intergenic
ACTTTCTTTAAGTACCCTTC+TGG 0.425473 8.4:+71909437 MS.gene25063:CDS
GGTCACCCTGAATATATCTA+TGG 0.427944 8.4:+71910345 MS.gene25063:CDS
AATTTATTCAAGGAGAAATT+GGG 0.433733 8.4:+71910583 MS.gene25063:CDS
AAGCTAGAGAACCAGCTAAA+GGG 0.442204 8.4:+71911032 MS.gene25063:CDS
AATATTTGAACCCCTTTAGC+TGG 0.444991 8.4:-71911043 None:intergenic
TTAACCAATATTCTTATGCT+AGG 0.460332 8.4:-71910927 None:intergenic
GCATGTTGTGGAAGTGGCTG+TGG 0.466815 8.4:+71911235 MS.gene25063:CDS
TCTGTATACTTATTTAGTGT+TGG 0.466966 8.4:+71910637 MS.gene25063:CDS
AAAGGTAAAGAATTTATTCA+AGG 0.471906 8.4:+71910573 MS.gene25063:CDS
AAATTGATATGGAATGGAAA+TGG 0.479120 8.4:+71911352 MS.gene25063:CDS
TTCGCCAAATTGATATGGAA+TGG 0.491966 8.4:+71911346 MS.gene25063:CDS
AACTACATCAATACAAGCAT+TGG 0.493799 8.4:+71909383 MS.gene25063:CDS
AGTGTTGGAAGCAATGACTA+TGG 0.497856 8.4:+71910652 MS.gene25063:CDS
TATTGATTAGCTTTCTCTGT+AGG 0.500420 8.4:-71911322 None:intergenic
CAGGCAAATTATCCTCCCTA+TGG 0.501668 8.4:+71909410 MS.gene25063:CDS
TGCAAATATGGTGGAAGTAG+AGG 0.513679 8.4:-71910318 None:intergenic
TTATAGGAAATTTATGACCT+AGG 0.517577 8.4:+71910858 MS.gene25063:intron
TTAAAGAAAGTCTGTCCATA+GGG 0.522108 8.4:-71909425 None:intergenic
GAATGTGTACCATAGTTTGA+AGG 0.527964 8.4:-71911110 None:intergenic
CTTCCACCATATTTGCATCC+AGG 0.531243 8.4:+71910324 MS.gene25063:CDS
AAAGCTAGAGAACCAGCTAA+AGG 0.532853 8.4:+71911031 MS.gene25063:CDS
TTGGTTAATAATGGAACAGA+AGG 0.533866 8.4:+71910942 MS.gene25063:CDS
AGTCTTCTGGATCCAAACTC+TGG 0.534866 8.4:+71910676 MS.gene25063:CDS
CTTAAAGAAAGTCTGTCCAT+AGG 0.538225 8.4:-71909426 None:intergenic
GCACTCTCTCAAACATCTCA+AGG 0.540073 8.4:+71910396 MS.gene25063:CDS
TGGTGGAAGTAGAGGCAACT+TGG 0.541652 8.4:-71910310 None:intergenic
ATGCTAGGATAGCAGCCAAA+AGG 0.547875 8.4:-71910912 None:intergenic
TAGATATATTCAGGGTGACC+TGG 0.550497 8.4:-71910342 None:intergenic
GAAGCAAGTGCAGCATGTTG+TGG 0.555081 8.4:+71911223 MS.gene25063:CDS
TAACTCCATAGATATATTCA+GGG 0.561814 8.4:-71910350 None:intergenic
AGTGCAGCATGTTGTGGAAG+TGG 0.579151 8.4:+71911229 MS.gene25063:CDS
AGCTAGAGAACCAGCTAAAG+GGG 0.587898 8.4:+71911033 MS.gene25063:CDS
CATAGATGAAATTTCAGCAG+TGG 0.592459 8.4:+71910971 MS.gene25063:CDS
CCGTCAGAAAATCTACCAGA+AGG 0.595079 8.4:-71909452 None:intergenic
TGTTGTGGAAGTGGCTGTGG+AGG 0.606060 8.4:+71911238 MS.gene25063:CDS
ATACTTTGATGACATTTGTG+AGG 0.609808 8.4:-71910750 None:intergenic
CGTCAGAAAATCTACCAGAA+GGG 0.641192 8.4:-71909451 None:intergenic
TAGGAAATTTATGACCTAGG+TGG 0.647961 8.4:+71910861 MS.gene25063:intron
AAGAAAGTCTGTCCATAGGG+AGG 0.658983 8.4:-71909422 None:intergenic
GTTGTGGAAGTGGCTGTGGA+GGG 0.661412 8.4:+71911239 MS.gene25063:CDS
ATGGAAATGGCAGTGTCACA+TGG 0.664922 8.4:+71911365 MS.gene25063:CDS
AATTGCTTGCCTAAGAAACA+TGG 0.674205 8.4:+71909314 MS.gene25063:CDS
TGACCTGGATGCAAATATGG+TGG 0.680616 8.4:-71910327 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATGATATGTTTATTTAT+AGG + chr8.4:71910842-71910861 MS.gene25063:intron 10.0%
!!! ACATATGTTTATTTTTTTTT+AGG + chr8.4:71909527-71909546 MS.gene25063:intron 10.0%
!!! ATATGTTTATTTTTTTTTAG+GGG + chr8.4:71909529-71909548 MS.gene25063:intron 10.0%
!!! CATATGTTTATTTTTTTTTA+GGG + chr8.4:71909528-71909547 MS.gene25063:intron 10.0%
!!! TATGTTTTGAAAAAAAAAAT+TGG - chr8.4:71909512-71909531 None:intergenic 10.0%
!!! TTTATGTTTGATAAATTTTT+GGG + chr8.4:71911189-71911208 MS.gene25063:intron 10.0%
!!! TTTTATGTTTGATAAATTTT+TGG + chr8.4:71911188-71911207 MS.gene25063:intron 10.0%
!!! AAAAAAGTTAACTTTTTATC+CGG + chr8.4:71909921-71909940 MS.gene25063:intron 15.0%
!!! AAATATAGTTTTCATTTTAG+AGG - chr8.4:71910464-71910483 None:intergenic 15.0%
!!! AAGTTAACTTTTTTTAAAGA+AGG - chr8.4:71909915-71909934 None:intergenic 15.0%
!!! ATAAGAATATTGGTTAATAA+TGG + chr8.4:71910933-71910952 MS.gene25063:CDS 15.0%
!! AAAGGTAAAGAATTTATTCA+AGG + chr8.4:71910573-71910592 MS.gene25063:CDS 20.0%
!! AATTTATTCAAGGAGAAATT+GGG + chr8.4:71910583-71910602 MS.gene25063:CDS 20.0%
!! ACTAAATAAGTATACAGATT+TGG - chr8.4:71910635-71910654 None:intergenic 20.0%
!! TCAGTTGAGTTATTTAAAAA+AGG + chr8.4:71910555-71910574 MS.gene25063:CDS 20.0%
!!! AAAAAGTTAACTTTTTATCC+GGG + chr8.4:71909922-71909941 MS.gene25063:intron 20.0%
!!! TTTTGTTTTCTTAGAAATCA+AGG - chr8.4:71910250-71910269 None:intergenic 20.0%
! AAATTGATATGGAATGGAAA+TGG + chr8.4:71911352-71911371 MS.gene25063:CDS 25.0%
! AATATTTCGCCAAATTGATA+TGG + chr8.4:71911341-71911360 MS.gene25063:CDS 25.0%
! AGAAAAATCATCTTAGACTT+TGG - chr8.4:71909754-71909773 None:intergenic 25.0%
! ATTTCCATTCCATATCAATT+TGG - chr8.4:71911353-71911372 None:intergenic 25.0%
! GAAAAATCATCTTAGACTTT+GGG - chr8.4:71909753-71909772 None:intergenic 25.0%
! GAATTTATTCAAGGAGAAAT+TGG + chr8.4:71910582-71910601 MS.gene25063:CDS 25.0%
! TAACTCCATAGATATATTCA+GGG - chr8.4:71910353-71910372 None:intergenic 25.0%
! TCTGTATACTTATTTAGTGT+TGG + chr8.4:71910637-71910656 MS.gene25063:CDS 25.0%
! TTAACCAATATTCTTATGCT+AGG - chr8.4:71910930-71910949 None:intergenic 25.0%
! TTAACTCCATAGATATATTC+AGG - chr8.4:71910354-71910373 None:intergenic 25.0%
! TTATAGGAAATTTATGACCT+AGG + chr8.4:71910858-71910877 MS.gene25063:intron 25.0%
! TTGTAACACTCTAATCAAAA+TGG - chr8.4:71910042-71910061 None:intergenic 25.0%
! TTGTTAGCACAAAAAAATCA+AGG - chr8.4:71910791-71910810 None:intergenic 25.0%
!! TTCGATTGTTGTTAACATAT+AGG + chr8.4:71910516-71910535 MS.gene25063:intron 25.0%
!!! AAAATTTGGGTTGCTTAATT+TGG + chr8.4:71910887-71910906 MS.gene25063:CDS 25.0%
!!! AAATTTGGGTTGCTTAATTT+GGG + chr8.4:71910888-71910907 MS.gene25063:CDS 25.0%
!!! CAATTTGTTGATATTGTCAT+TGG + chr8.4:71910724-71910743 MS.gene25063:CDS 25.0%
!!! TGTTTGATAAATTTTTGGGA+AGG + chr8.4:71911193-71911212 MS.gene25063:intron 25.0%
AAAATCGTACCAACAAAATC+TGG - chr8.4:71909488-71909507 None:intergenic 30.0%
AACTACATCAATACAAGCAT+TGG + chr8.4:71909383-71909402 MS.gene25063:CDS 30.0%
AGAACTCCTAAAAAAAGTGA+CGG - chr8.4:71909783-71909802 None:intergenic 30.0%
AGACTCCTAACAATTATGTA+GGG - chr8.4:71909607-71909626 None:intergenic 30.0%
CTATCCTAGCATAAGAATAT+TGG + chr8.4:71910923-71910942 MS.gene25063:CDS 30.0%
GGAGATTCACTATTTGATAA+TGG + chr8.4:71909353-71909372 MS.gene25063:CDS 30.0%
GTAATCTCTAGTATATCATG+TGG - chr8.4:71909813-71909832 None:intergenic 30.0%
TTAAAGAAAGTCTGTCCATA+GGG - chr8.4:71909428-71909447 None:intergenic 30.0%
! AATAACTCAACTGAGTTTTC+AGG - chr8.4:71910549-71910568 None:intergenic 30.0%
! AATAGCTGCTTTAGATTGTA+AGG - chr8.4:71911391-71911410 None:intergenic 30.0%
! ATACTTTGATGACATTTGTG+AGG - chr8.4:71910753-71910772 None:intergenic 30.0%
! ATGAAGTATCCTTCAAACTA+TGG + chr8.4:71911101-71911120 MS.gene25063:CDS 30.0%
! TATGGAGTTAATTTTGCATC+AGG + chr8.4:71910363-71910382 MS.gene25063:CDS 30.0%
! TTGGTTAATAATGGAACAGA+AGG + chr8.4:71910942-71910961 MS.gene25063:CDS 30.0%
!! ACAAATTGTTGATGATCAAC+AGG - chr8.4:71910712-71910731 None:intergenic 30.0%
!! TATTGATTAGCTTTCTCTGT+AGG - chr8.4:71911325-71911344 None:intergenic 30.0%
!!! TTCATTCCGTCACTTTTTTT+AGG + chr8.4:71909774-71909793 MS.gene25063:intron 30.0%
AATAGTGCACCATGTTTCTT+AGG - chr8.4:71909326-71909345 None:intergenic 35.0%
AATATTTGAACCCCTTTAGC+TGG - chr8.4:71911046-71911065 None:intergenic 35.0%
AATTGCTTGCCTAAGAAACA+TGG + chr8.4:71909314-71909333 MS.gene25063:CDS 35.0%
ACATAATTGTTAGGAGTCTG+AGG + chr8.4:71909608-71909627 MS.gene25063:intron 35.0%
ACCTAGGTGGAAGAAAATTT+GGG + chr8.4:71910874-71910893 MS.gene25063:CDS 35.0%
ACTTTCTTTAAGTACCCTTC+TGG + chr8.4:71909437-71909456 MS.gene25063:CDS 35.0%
ATCCTCCCTACATAATTGTT+AGG + chr8.4:71909599-71909618 MS.gene25063:intron 35.0%
ATCTCTAGTATATCATGTGG+CGG - chr8.4:71909810-71909829 None:intergenic 35.0%
CAGACTCCTAACAATTATGT+AGG - chr8.4:71909608-71909627 None:intergenic 35.0%
CATAATTGTTAGGAGTCTGA+GGG + chr8.4:71909609-71909628 MS.gene25063:intron 35.0%
CATAGATGAAATTTCAGCAG+TGG + chr8.4:71910971-71910990 MS.gene25063:CDS 35.0%
CATGGTGCACTATTCATATT+TGG + chr8.4:71909332-71909351 MS.gene25063:CDS 35.0%
CTTAAAGAAAGTCTGTCCAT+AGG - chr8.4:71909429-71909448 None:intergenic 35.0%
GAATGTGTACCATAGTTTGA+AGG - chr8.4:71911113-71911132 None:intergenic 35.0%
GATTGTCAAAAAACCTGAAC+AGG + chr8.4:71910195-71910214 MS.gene25063:intron 35.0%
TAGGAAATTTATGACCTAGG+TGG + chr8.4:71910861-71910880 MS.gene25063:intron 35.0%
TTCGCCAAATTGATATGGAA+TGG + chr8.4:71911346-71911365 MS.gene25063:CDS 35.0%
! ACACAGTAGTACTAGTCTAT+AGG - chr8.4:71910227-71910246 None:intergenic 35.0%
! ACTTTTTATCCGGGAAATTG+TGG + chr8.4:71909931-71909950 MS.gene25063:intron 35.0%
! GAGTTAATTTTGCATCAGGA+GGG + chr8.4:71910367-71910386 MS.gene25063:CDS 35.0%
! TTAGACTTTGGGAGAATATG+TGG - chr8.4:71909742-71909761 None:intergenic 35.0%
!! CAATACAAGCATTGGTAATC+AGG + chr8.4:71909391-71909410 MS.gene25063:CDS 35.0%
!! TATTGATTCGTTGTTTCTCC+CGG - chr8.4:71909639-71909658 None:intergenic 35.0%
!! TTGCTTAATTTGGGTCCTTT+TGG + chr8.4:71910897-71910916 MS.gene25063:CDS 35.0%
AAAGCTAGAGAACCAGCTAA+AGG + chr8.4:71911031-71911050 MS.gene25063:CDS 40.0%
AAGCTAGAGAACCAGCTAAA+GGG + chr8.4:71911032-71911051 MS.gene25063:CDS 40.0%
ACATCACTACCACAATTTCC+CGG - chr8.4:71909943-71909962 None:intergenic 40.0%
CAATGACTATGGTAGTCTTC+TGG + chr8.4:71910663-71910682 MS.gene25063:CDS 40.0%
CGTCAGAAAATCTACCAGAA+GGG - chr8.4:71909454-71909473 None:intergenic 40.0%
CTATAGGACAAATCCTGTTC+AGG - chr8.4:71910211-71910230 None:intergenic 40.0%
CTCCATAACCATAAGAGAGA+GGG + chr8.4:71909714-71909733 MS.gene25063:intron 40.0%
CTCCTAACAATTATGTAGGG+AGG - chr8.4:71909604-71909623 None:intergenic 40.0%
GACCTAGGTGGAAGAAAATT+TGG + chr8.4:71910873-71910892 MS.gene25063:CDS 40.0%
GGTCACCCTGAATATATCTA+TGG + chr8.4:71910345-71910364 MS.gene25063:CDS 40.0%
TAGATATATTCAGGGTGACC+TGG - chr8.4:71910345-71910364 None:intergenic 40.0%
! ACCCAAATTTTCTTCCACCT+AGG - chr8.4:71910878-71910897 None:intergenic 40.0%
! AGTGTTGGAAGCAATGACTA+TGG + chr8.4:71910652-71910671 MS.gene25063:CDS 40.0%
! CCTTCTGGTAGATTTTCTGA+CGG + chr8.4:71909452-71909471 MS.gene25063:CDS 40.0%
! CGCATGATACCAGATTTTGT+TGG + chr8.4:71909476-71909495 MS.gene25063:CDS 40.0%
! GGAGTTAATTTTGCATCAGG+AGG + chr8.4:71910366-71910385 MS.gene25063:CDS 40.0%
! TGCAAATATGGTGGAAGTAG+AGG - chr8.4:71910321-71910340 None:intergenic 40.0%
AAGAAAGTCTGTCCATAGGG+AGG - chr8.4:71909425-71909444 None:intergenic 45.0%
AGCTAGAGAACCAGCTAAAG+GGG + chr8.4:71911033-71911052 MS.gene25063:CDS 45.0%
AGTCTTCTGGATCCAAACTC+TGG + chr8.4:71910676-71910695 MS.gene25063:CDS 45.0%
ATGCTAGGATAGCAGCCAAA+AGG - chr8.4:71910915-71910934 None:intergenic 45.0%
ATGGAAATGGCAGTGTCACA+TGG + chr8.4:71911365-71911384 MS.gene25063:CDS 45.0%
CACATGATGTTGTCGAGTGA+CGG + chr8.4:71910001-71910020 MS.gene25063:intron 45.0%
CAGGCAAATTATCCTCCCTA+TGG + chr8.4:71909410-71909429 MS.gene25063:CDS 45.0%
CCGTCAGAAAATCTACCAGA+AGG - chr8.4:71909455-71909474 None:intergenic 45.0%
CTTCCACCATATTTGCATCC+AGG + chr8.4:71910324-71910343 MS.gene25063:CDS 45.0%
GCACTCTCTCAAACATCTCA+AGG + chr8.4:71910396-71910415 MS.gene25063:CDS 45.0%
GCTCCATAACCATAAGAGAG+AGG + chr8.4:71909713-71909732 MS.gene25063:intron 45.0%
GGTAGAAGAACACCAGAGTT+TGG - chr8.4:71910691-71910710 None:intergenic 45.0%
TGACCTGGATGCAAATATGG+TGG - chr8.4:71910330-71910349 None:intergenic 45.0%
! AATTTTGCATCAGGAGGGTC+TGG + chr8.4:71910372-71910391 MS.gene25063:CDS 45.0%
! GAGTGACGGAACTTAGCAAA+GGG + chr8.4:71910015-71910034 MS.gene25063:intron 45.0%
AGTGCAGCATGTTGTGGAAG+TGG + chr8.4:71911229-71911248 MS.gene25063:CDS 50.0%
CGCCCTCTCTCTTATGGTTA+TGG - chr8.4:71909719-71909738 None:intergenic 50.0%
CGTCACTCGACAACATCATG+TGG - chr8.4:71910003-71910022 None:intergenic 50.0%
GAAGCAAGTGCAGCATGTTG+TGG + chr8.4:71911223-71911242 MS.gene25063:CDS 50.0%
GGGTGACCTGGATGCAAATA+TGG - chr8.4:71910333-71910352 None:intergenic 50.0%
TGGTGGAAGTAGAGGCAACT+TGG - chr8.4:71910313-71910332 None:intergenic 50.0%
TTAGGAGTCTGAGGGAGTTC+CGG + chr8.4:71909617-71909636 MS.gene25063:intron 50.0%
! CGAGTGACGGAACTTAGCAA+AGG + chr8.4:71910014-71910033 MS.gene25063:intron 50.0%
ATGTGGCGCCCTCTCTCTTA+TGG - chr8.4:71909725-71909744 None:intergenic 55.0%
GCATGTTGTGGAAGTGGCTG+TGG + chr8.4:71911235-71911254 MS.gene25063:CDS 55.0%
GTTGTGGAAGTGGCTGTGGA+GGG + chr8.4:71911239-71911258 MS.gene25063:CDS 55.0%
TAGGAGTCTGAGGGAGTTCC+GGG + chr8.4:71909618-71909637 MS.gene25063:intron 55.0%
TGTTGTGGAAGTGGCTGTGG+AGG + chr8.4:71911238-71911257 MS.gene25063:CDS 55.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 71909305 71911420 71909305 ID=MS.gene25063
chr8.4 mRNA 71909305 71911420 71909305 ID=MS.gene25063.t1;Parent=MS.gene25063
chr8.4 exon 71909305 71909497 71909305 ID=MS.gene25063.t1.exon1;Parent=MS.gene25063.t1
chr8.4 CDS 71909305 71909497 71909305 ID=cds.MS.gene25063.t1;Parent=MS.gene25063.t1
chr8.4 exon 71910301 71910422 71910301 ID=MS.gene25063.t1.exon2;Parent=MS.gene25063.t1
chr8.4 CDS 71910301 71910422 71910301 ID=cds.MS.gene25063.t1;Parent=MS.gene25063.t1
chr8.4 exon 71910538 71910768 71910538 ID=MS.gene25063.t1.exon3;Parent=MS.gene25063.t1
chr8.4 CDS 71910538 71910768 71910538 ID=cds.MS.gene25063.t1;Parent=MS.gene25063.t1
chr8.4 exon 71910864 71911122 71910864 ID=MS.gene25063.t1.exon4;Parent=MS.gene25063.t1
chr8.4 CDS 71910864 71911122 71910864 ID=cds.MS.gene25063.t1;Parent=MS.gene25063.t1
chr8.4 exon 71911215 71911420 71911215 ID=MS.gene25063.t1.exon5;Parent=MS.gene25063.t1
chr8.4 CDS 71911215 71911420 71911215 ID=cds.MS.gene25063.t1;Parent=MS.gene25063.t1
Gene Sequence

>MS.gene25063

ATGATCATGAATTGCTTGCCTAAGAAACATGGTGCACTATTCATATTTGGAGATTCACTATTTGATAATGGTAACAACAACTACATCAATACAAGCATTGGTAATCAGGCAAATTATCCTCCCTATGGACAGACTTTCTTTAAGTACCCTTCTGGTAGATTTTCTGACGGACGCATGATACCAGATTTTGTTGGTACGATTTTTCCAATTTTTTTTTTCAAAACATATGTTTATTTTTTTTTAGGGGAAAACATATGTTTATTTTATTGTGTAGTTAGTATATAGATTCAAATTATCCTCCCTACATAATTGTTAGGAGTCTGAGGGAGTTCCGGGAGAAACAACGAATCAATATATCTCGATAACAAGAGAGAGAGAGAGAGAGATAACACATCTCTACTCAATTTTGCTCCATAACCATAAGAGAGAGGGCGCCACATATTCTCCCAAAGTCTAAGATGATTTTTCTTTCATTCCGTCACTTTTTTTAGGAGTTCTCATTCCGCCACATGATATACTAGAGATTACATAGATTGTTACATTTTCATTTAACGTGTTGCATGATGTAGTCTAATTAAAGAACTTAGCTATGACATTAACTTTTTATCCTTCTTTAAAAAAAGTTAACTTTTTATCCGGGAAATTGTGGTAGTGATGTAGAGATTACTTAGATTGTAACATTTTCATTTAACGTACCACATGATGTTGTCGAGTGACGGAACTTAGCAAAGGGACCATTTTGATTAGAGTGTTACAATGTTGTAGACAAGATTGTTAATTCGTAAAAGTGAAAAACGAATTTAACTGACAATTATCATTTCAAGAAAAAAGAAAATACAAATAAATTTCGTCGCTAAATTTAGCTATGAGAAACAACATATGCACTATATGATTGTCAAAAAACCTGAACAGGATTTGTCCTATAGACTAGTACTACTGTGTCCTTGATTTCTAAGAAAACAAAAACATAACAAAATAGTTGTCTAATTTTTTCAGCTGAGTATGCCAAGTTGCCTCTACTTCCACCATATTTGCATCCAGGTCACCCTGAATATATCTATGGAGTTAATTTTGCATCAGGAGGGTCTGGTGCACTCTCTCAAACATCTCAAGGAAGTGTAAGCTCATCTTTAAATTCATTGAATATCTTTTTCTACCTCTAAAATGAAAACTATATTTATAGTATATACTAATATAAACATTATCTGAACTTCGATTGTTGTTAACATATAGGTGATAGACCTGAAAACTCAGTTGAGTTATTTAAAAAAGGTAAAGAATTTATTCAAGGAGAAATTGGGACATGAAAAAACAAAAGAATTGTTGTCCAAATCTGTATACTTATTTAGTGTTGGAAGCAATGACTATGGTAGTCTTCTGGATCCAAACTCTGGTGTTCTTCTACCTGTTGATCATCAACAATTTGTTGATATTGTCATTGGAAACCTCACAAATGTCATCAAAGTATGTAAAGTTTTATAAGCCTTGATTTTTTTGTGCTAACAATAGATATGATATTAATTTTGTGCTAACAATATATATGATATGTTTATTTATAGGAAATTTATGACCTAGGTGGAAGAAAATTTGGGTTGCTTAATTTGGGTCCTTTTGGCTGCTATCCTAGCATAAGAATATTGGTTAATAATGGAACAGAAGGTGAATGCATAGATGAAATTTCAGCAGTGGCAAGACTACACAACAATAAACTCACAAAAATGCTTCAAAAGCTAGAGAACCAGCTAAAGGGGTTCAAATATTCAATCAATGATTTCTACAGTGCATTTTCTGAAGTGATGAAGTATCCTTCAAACTATGGTACACATTCATTAATTATTATGTAGTGAGTTTTATGTGTGAGCATATATACTAATCATTGTTAATTTTATGTTTGATAAATTTTTGGGAAGGCTTTAAAGAAGCAAGTGCAGCATGTTGTGGAAGTGGCTGTGGAGGGAACAAAGAATATGAGTTATGTGACAATGTGAATGAACATGTATTCTTTGACACTCATCATCCTACAGAGAAAGCTAATCAATATTTCGCCAAATTGATATGGAATGGAAATGGCAGTGTCACATGGCCTTACAATCTAAAGCAGCTATTTGAAATTTGA
Protein sequence

>MS.gene25063.t1

MIMNCLPKKHGALFIFGDSLFDNGNNNYINTSIGNQANYPPYGQTFFKYPSGRFSDGRMIPDFVAEYAKLPLLPPYLHPGHPEYIYGVNFASGGSGALSQTSQGSVIDLKTQLSYLKKVKNLFKEKLGHEKTKELLSKSVYLFSVGSNDYGSLLDPNSGVLLPVDHQQFVDIVIGNLTNVIKEIYDLGGRKFGLLNLGPFGCYPSIRILVNNGTEGECIDEISAVARLHNNKLTKMLQKLENQLKGFKYSINDFYSAFSEVMKYPSNYGFKEASAACCGSGCGGNKEYELCDNVNEHVFFDTHHPTEKANQYFAKLIWNGNGSVTWPYNLKQLFEI