AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene051046

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051046.t1 MTR_8g022790 97.917 336 7 0 1 336 26 361 0.0 677
MS.gene051046.t1 MTR_8g031420 56.598 341 132 4 5 335 28 362 2.14e-138 397
MS.gene051046.t1 MTR_8g031430 56.598 341 132 4 5 335 30 364 5.00e-135 388
MS.gene051046.t1 MTR_8g031390 55.325 338 134 5 5 332 30 360 1.49e-127 370
MS.gene051046.t1 MTR_8g031400 53.079 341 144 4 5 335 30 364 5.96e-127 368
MS.gene051046.t1 MTR_8g022810 49.706 340 158 4 8 335 37 375 6.33e-113 333
MS.gene051046.t1 MTR_8g031390 56.552 290 112 4 5 287 30 312 7.74e-110 323
MS.gene051046.t1 MTR_2g044100 50.599 334 153 4 12 334 43 375 1.25e-107 320
MS.gene051046.t1 MTR_8g022810 43.529 340 126 5 8 335 37 322 2.72e-85 260
MS.gene051046.t1 MTR_3g005650 34.535 333 205 5 12 336 30 357 1.69e-57 190
MS.gene051046.t1 MTR_5g022630 33.750 320 198 7 12 319 43 360 2.41e-55 184
MS.gene051046.t1 MTR_8g079050 34.682 346 201 11 11 336 36 376 8.74e-55 183
MS.gene051046.t1 MTR_5g093090 33.136 338 204 7 12 333 28 359 3.04e-54 182
MS.gene051046.t1 MTR_8g075230 35.404 322 188 8 12 319 36 351 6.73e-54 181
MS.gene051046.t1 MTR_8g074570 34.393 346 197 10 8 333 34 369 1.84e-53 180
MS.gene051046.t1 MTR_8g014910 34.862 327 197 8 12 325 32 355 2.15e-53 179
MS.gene051046.t1 MTR_2g033930 33.626 342 198 10 12 335 32 362 1.25e-52 177
MS.gene051046.t1 MTR_1g079530 34.111 343 192 13 12 336 29 355 2.62e-52 176
MS.gene051046.t1 MTR_3g052490 33.333 348 204 10 8 336 28 366 7.53e-52 176
MS.gene051046.t1 MTR_7g116520 32.153 339 210 8 12 336 34 366 2.82e-51 174
MS.gene051046.t1 MTR_3g464730 34.579 321 189 10 9 314 25 339 5.63e-51 173
MS.gene051046.t1 MTR_3g082830 35.220 318 184 10 12 314 38 348 9.89e-51 172
MS.gene051046.t1 MTR_2g033920 33.235 340 210 9 9 335 32 367 1.46e-50 172
MS.gene051046.t1 MTR_2g461580 31.765 340 205 8 5 333 24 347 4.06e-50 171
MS.gene051046.t1 MTR_5g084770 33.119 311 195 6 12 311 28 336 4.61e-50 170
MS.gene051046.t1 MTR_3g052480 33.239 352 200 11 8 336 29 368 7.48e-50 170
MS.gene051046.t1 MTR_2g084585 34.810 316 188 8 12 314 30 340 8.20e-50 170
MS.gene051046.t1 MTR_8g074580 31.606 386 195 11 8 333 40 416 2.08e-49 171
MS.gene051046.t1 MTR_4g087985 33.846 325 182 11 9 309 33 348 5.33e-49 168
MS.gene051046.t1 MTR_5g022640 32.188 320 202 7 12 319 43 359 5.99e-49 168
MS.gene051046.t1 MTR_5g084790 35.474 327 195 8 3 317 23 345 6.82e-49 167
MS.gene051046.t1 MTR_7g116570 30.882 340 219 7 9 336 31 366 1.04e-48 167
MS.gene051046.t1 MTR_1g069175 31.014 345 208 12 12 336 33 367 1.35e-48 167
MS.gene051046.t1 MTR_2g100620 33.540 322 198 8 12 320 31 349 3.26e-48 166
MS.gene051046.t1 MTR_4g122200 32.456 342 204 11 12 335 35 367 4.84e-48 166
MS.gene051046.t1 MTR_4g035353 30.372 349 225 8 1 336 20 363 5.15e-48 165
MS.gene051046.t1 MTR_3g021460 32.831 332 198 9 12 333 31 347 1.25e-47 164
MS.gene051046.t1 MTR_3g435540 32.907 313 194 7 14 314 25 333 1.27e-47 164
MS.gene051046.t1 MTR_5g084750 32.716 324 199 10 1 310 18 336 1.73e-47 164
MS.gene051046.t1 MTR_3g052580 30.925 346 214 9 8 336 24 361 2.26e-47 164
MS.gene051046.t1 MTR_4g056160 35.849 318 185 8 12 314 27 340 3.09e-47 163
MS.gene051046.t1 MTR_3g052580 30.925 346 214 9 8 336 23 360 3.55e-47 164
MS.gene051046.t1 MTR_5g078210 33.121 314 192 9 14 315 27 334 3.56e-47 163
MS.gene051046.t1 MTR_1g025760 34.839 310 182 11 12 307 80 383 3.78e-47 164
MS.gene051046.t1 MTR_1g024890 31.268 339 213 8 12 336 32 364 8.55e-47 162
MS.gene051046.t1 MTR_3g098270 33.136 338 209 7 12 335 34 368 9.14e-47 162
MS.gene051046.t1 MTR_5g074270 33.230 322 201 7 6 315 27 346 1.23e-46 162
MS.gene051046.t1 MTR_2g017925 35.329 334 194 11 12 335 33 354 1.43e-46 162
MS.gene051046.t1 MTR_3g024510 32.239 335 211 9 14 336 40 370 2.17e-46 161
MS.gene051046.t1 MTR_7g116510 29.885 348 225 8 3 336 16 358 6.15e-46 160
MS.gene051046.t1 MTR_0009s0250 33.750 320 183 11 8 314 29 332 7.81e-46 159
MS.gene051046.t1 MTR_2g015080 33.742 326 189 10 6 309 32 352 8.19e-46 160
MS.gene051046.t1 MTR_7g008060 32.047 337 202 10 9 334 30 350 1.38e-45 159
MS.gene051046.t1 MTR_4g108690 31.949 313 197 7 14 314 29 337 1.50e-45 159
MS.gene051046.t1 MTR_3g114090 33.766 308 192 8 12 309 36 341 1.93e-45 159
MS.gene051046.t1 MTR_0565s0010 31.563 339 209 11 14 336 34 365 2.01e-45 159
MS.gene051046.t1 MTR_1g025780 34.516 310 185 9 12 309 41 344 2.44e-45 158
MS.gene051046.t1 MTR_1g079540 30.814 344 216 9 7 336 28 363 3.96e-45 158
MS.gene051046.t1 MTR_1g025680 34.516 310 187 9 12 309 34 339 1.63e-44 158
MS.gene051046.t1 MTR_7g116500 30.294 340 211 9 12 334 33 363 1.92e-44 156
MS.gene051046.t1 MTR_4g056280 34.727 311 189 6 12 311 30 337 8.82e-44 154
MS.gene051046.t1 MTR_6g021530 30.060 336 218 7 14 336 31 362 1.41e-43 154
MS.gene051046.t1 MTR_5g009100 32.249 338 202 13 14 333 48 376 3.40e-42 150
MS.gene051046.t1 MTR_1g025720 31.546 317 200 9 12 316 37 348 5.42e-42 149
MS.gene051046.t1 MTR_8g075220 29.448 326 207 9 12 319 40 360 5.45e-42 150
MS.gene051046.t1 MTR_7g116870 32.000 350 183 11 12 323 33 365 5.68e-42 150
MS.gene051046.t1 MTR_2g017955 33.628 339 198 13 12 335 33 359 1.74e-41 149
MS.gene051046.t1 MTR_4g019880 30.117 342 215 10 12 336 32 366 1.98e-41 148
MS.gene051046.t1 MTR_1g025700 33.013 312 188 10 12 309 50 354 3.26e-41 147
MS.gene051046.t1 MTR_3g023220 32.036 334 203 11 12 335 33 352 4.58e-41 147
MS.gene051046.t1 MTR_8g087870 31.437 334 209 9 12 336 29 351 1.15e-40 145
MS.gene051046.t1 MTR_3g114120 32.075 318 199 8 12 317 47 359 2.40e-40 145
MS.gene051046.t1 MTR_8g074560 30.199 351 210 12 9 335 28 367 2.61e-40 145
MS.gene051046.t1 MTR_8g028160 31.025 361 199 9 13 336 37 384 9.96e-40 144
MS.gene051046.t1 MTR_8g075200 28.707 317 212 7 12 317 41 354 1.34e-39 144
MS.gene051046.t1 MTR_1g025910 29.412 306 200 8 17 311 41 341 1.56e-39 143
MS.gene051046.t1 MTR_8g087890 29.912 341 211 11 14 336 33 363 1.66e-39 143
MS.gene051046.t1 MTR_2g017875 30.792 341 207 12 12 336 34 361 2.16e-38 140
MS.gene051046.t1 MTR_5g093090 32.714 269 164 6 12 269 28 290 2.01e-37 136
MS.gene051046.t1 MTR_3g005660 29.377 337 218 9 12 333 36 367 3.85e-37 137
MS.gene051046.t1 MTR_2g033920 34.328 268 165 8 9 269 32 295 2.36e-36 133
MS.gene051046.t1 MTR_2g017965 29.794 339 212 11 12 335 33 360 3.55e-36 134
MS.gene051046.t1 MTR_5g078210 32.443 262 167 7 14 269 27 284 8.67e-36 132
MS.gene051046.t1 MTR_2g015590 30.178 338 203 9 10 320 29 360 1.44e-35 133
MS.gene051046.t1 MTR_7g087190 31.700 347 194 11 12 323 43 381 2.77e-35 132
MS.gene051046.t1 MTR_7g033155 27.945 365 206 8 7 323 33 388 4.64e-35 132
MS.gene051046.t1 MTR_1g030220 31.609 348 183 10 12 320 40 371 1.64e-34 130
MS.gene051046.t1 MTR_7g113860 29.714 350 188 10 12 320 29 361 2.07e-34 130
MS.gene051046.t1 MTR_8g089805 29.769 346 195 10 12 320 40 374 5.14e-34 129
MS.gene051046.t1 MTR_7g104220 33.866 313 168 16 13 307 43 334 1.50e-33 127
MS.gene051046.t1 MTR_5g083040 29.560 318 201 10 9 308 29 341 3.48e-33 126
MS.gene051046.t1 MTR_7g111780 30.183 328 200 9 8 317 32 348 7.06e-33 125
MS.gene051046.t1 MTR_7g113860 29.429 350 189 11 12 320 35 367 7.19e-33 125
MS.gene051046.t1 MTR_1g030275 29.619 341 197 8 12 320 39 368 1.34e-32 125
MS.gene051046.t1 MTR_1g092750 28.875 329 197 9 13 324 41 349 2.00e-32 124
MS.gene051046.t1 MTR_1g092690 28.615 325 185 10 8 307 39 341 2.02e-32 124
MS.gene051046.t1 MTR_2g087292 29.808 312 139 9 7 314 28 263 1.39e-31 120
MS.gene051046.t1 MTR_1g030268 31.487 343 188 11 12 320 40 369 1.83e-31 122
MS.gene051046.t1 MTR_2g015650 28.205 351 218 9 1 324 20 363 3.14e-31 121
MS.gene051046.t1 MTR_7g033150 27.247 356 199 9 12 323 35 374 5.20e-31 120
MS.gene051046.t1 MTR_2g015630 29.070 344 206 10 17 333 36 368 5.28e-31 120
MS.gene051046.t1 MTR_1g092760 29.874 318 183 11 8 307 35 330 2.81e-30 118
MS.gene051046.t1 MTR_2g017915 28.994 338 194 11 12 335 33 338 4.12e-30 117
MS.gene051046.t1 MTR_1g082390 28.809 361 208 11 1 325 20 367 4.79e-30 118
MS.gene051046.t1 MTR_5g087690 27.726 321 208 8 12 319 50 359 7.43e-30 117
MS.gene051046.t1 MTR_1g030230 29.738 343 196 9 12 320 32 363 1.12e-29 117
MS.gene051046.t1 MTR_1g060500 31.861 317 176 12 13 307 41 339 1.21e-29 116
MS.gene051046.t1 MTR_1g060490 30.097 309 184 12 13 307 38 328 2.20e-29 115
MS.gene051046.t1 MTR_1g030340 29.799 349 189 10 12 320 42 374 3.36e-29 116
MS.gene051046.t1 MTR_2g043980 29.762 336 200 10 4 320 28 346 4.76e-29 115
MS.gene051046.t1 MTR_7g033165 30.058 346 194 11 12 321 33 366 6.00e-29 115
MS.gene051046.t1 MTR_4g104240 26.113 337 212 8 13 323 40 365 1.08e-28 114
MS.gene051046.t1 MTR_6g007100 29.851 335 196 11 12 323 33 351 1.65e-28 113
MS.gene051046.t1 MTR_6g007090 27.221 349 218 7 2 323 29 368 2.69e-28 113
MS.gene051046.t1 MTR_2g015580 28.530 347 208 11 8 324 43 379 3.51e-28 113
MS.gene051046.t1 MTR_6g007095 29.942 344 195 10 12 323 41 370 4.49e-28 115
MS.gene051046.t1 MTR_6g007095 27.090 299 198 6 40 323 393 686 8.47e-25 105
MS.gene051046.t1 MTR_2g015590 31.047 277 168 8 10 269 29 299 2.03e-27 110
MS.gene051046.t1 MTR_2g015670 27.273 352 206 10 1 324 20 349 6.01e-27 109
MS.gene051046.t1 MTR_2g079080 27.679 336 217 10 1 320 19 344 2.23e-26 107
MS.gene051046.t1 MTR_0029s0050 27.679 336 217 10 1 320 19 344 2.99e-26 107
MS.gene051046.t1 MTR_2g079090 27.679 336 217 10 1 320 19 344 3.08e-26 107
MS.gene051046.t1 MTR_0029s0100 27.679 336 217 10 1 320 19 344 6.41e-26 106
MS.gene051046.t1 MTR_1g092740 28.526 312 185 9 13 307 39 329 8.71e-26 105
MS.gene051046.t1 MTR_2g017925 33.333 240 143 8 103 335 22 251 1.33e-25 103
MS.gene051046.t1 MTR_1g030268 31.769 277 157 8 12 269 40 303 4.43e-25 103
MS.gene051046.t1 MTR_3g448360 26.136 352 217 11 1 321 18 357 5.38e-25 103
MS.gene051046.t1 MTR_7g033165 31.343 268 150 8 12 257 33 288 9.02e-25 102
MS.gene051046.t1 MTR_3g463960 26.346 353 207 14 4 320 38 373 1.10e-23 100
MS.gene051046.t1 MTR_3g463950 26.346 353 207 14 4 320 38 373 1.10e-23 100
MS.gene051046.t1 MTR_3g463970 26.346 353 207 14 4 320 38 373 1.10e-23 100
MS.gene051046.t1 MTR_3g463940 26.346 353 207 14 4 320 38 373 1.10e-23 100
MS.gene051046.t1 MTR_3g463930 26.816 358 206 15 4 320 38 380 1.69e-23 100
MS.gene051046.t1 MTR_8g038680 26.050 357 221 10 1 323 15 362 2.65e-23 99.4
MS.gene051046.t1 MTR_1g079590 34.239 184 112 5 12 188 31 212 9.86e-23 94.7
MS.gene051046.t1 MTR_0127s0040 28.279 244 158 8 104 336 1 238 4.40e-22 93.6
MS.gene051046.t1 MTR_3g069780 27.011 348 216 11 1 320 19 356 4.86e-22 95.9
MS.gene051046.t1 MTR_3g438030 27.011 348 216 11 1 320 19 356 6.03e-22 95.5
MS.gene051046.t1 MTR_3g069520 26.346 353 212 11 1 321 19 355 9.01e-21 92.4
MS.gene051046.t1 MTR_7g111780 29.032 248 152 6 87 317 9 249 4.60e-20 88.6
MS.gene051046.t1 MTR_5g093090 36.242 149 83 4 12 149 28 175 8.80e-20 86.7
MS.gene051046.t1 MTR_1g060520 26.266 316 159 12 13 307 41 303 1.31e-19 88.2
MS.gene051046.t1 MTR_1108s0010 28.708 209 125 4 112 311 3 196 1.37e-19 86.3
MS.gene051046.t1 MTR_7g113860 26.421 299 166 9 63 320 8 293 2.53e-19 87.4
MS.gene051046.t1 MTR_8g089805 26.000 300 179 8 58 320 13 306 1.37e-18 85.5
MS.gene051046.t1 MTR_2g018015 34.653 202 113 8 12 201 36 230 1.72e-18 84.7
MS.gene051046.t1 MTR_8g012540 24.675 308 204 7 1 288 15 314 3.45e-18 84.7
MS.gene051046.t1 MTR_5g074210 32.394 142 89 3 180 315 62 202 5.52e-18 82.0
MS.gene051046.t1 MTR_1g030265 27.491 291 169 9 65 320 53 336 9.71e-18 83.2
MS.gene051046.t1 MTR_2g043990 29.825 285 145 10 4 269 90 338 9.40e-17 80.5
MS.gene051046.t1 MTR_4g036375 34.483 145 88 4 12 151 30 172 4.01e-16 75.9
MS.gene051046.t1 MTR_6g049230 39.640 111 64 2 171 281 63 170 5.15e-14 70.1
MS.gene051046.t1 MTR_4g036385 34.951 103 61 1 217 313 21 123 1.18e-12 64.7
MS.gene051046.t1 MTR_2g017895 23.741 278 172 12 72 336 17 267 2.08e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051046.t1 AT1G53920 51.176 340 148 6 12 336 48 384 8.48e-119 348
MS.gene051046.t1 AT5G40990 49.711 346 160 4 4 336 29 373 1.61e-118 347
MS.gene051046.t1 AT1G53940 48.837 344 162 4 6 336 33 375 2.57e-113 333
MS.gene051046.t1 AT3G14225 45.930 344 172 4 6 336 31 373 3.70e-107 318
MS.gene051046.t1 AT3G14225 45.690 348 171 5 6 336 31 377 3.71e-106 315
MS.gene051046.t1 AT1G53990 45.954 346 166 5 4 336 27 364 1.47e-101 303
MS.gene051046.t1 AT1G53940 48.881 268 134 2 6 271 33 299 1.37e-86 263
MS.gene051046.t1 AT1G71120 33.234 337 198 7 12 333 31 355 1.08e-58 193
MS.gene051046.t1 AT5G08460 33.531 337 206 9 12 333 49 382 9.06e-54 181
MS.gene051046.t1 AT4G26790 35.938 320 185 10 9 314 26 339 5.24e-53 178
MS.gene051046.t1 AT4G26790 35.938 320 185 10 9 314 26 339 5.24e-53 178
MS.gene051046.t1 AT1G54030 33.945 327 193 10 13 334 53 361 5.63e-53 180
MS.gene051046.t1 AT2G04570 34.743 331 196 9 12 330 28 350 5.68e-53 178
MS.gene051046.t1 AT5G41890 35.244 349 194 12 14 336 33 375 6.76e-52 176
MS.gene051046.t1 AT1G71691 33.535 331 206 6 12 333 55 380 6.75e-51 174
MS.gene051046.t1 AT1G20132 32.198 323 203 8 8 318 57 375 1.78e-50 172
MS.gene051046.t1 AT5G15720 32.249 338 213 7 12 336 30 364 3.54e-50 171
MS.gene051046.t1 AT5G45960 36.890 328 177 14 8 314 41 359 4.84e-50 171
MS.gene051046.t1 AT3G14820 36.218 312 179 10 12 311 32 335 6.36e-50 170
MS.gene051046.t1 AT1G20120 33.739 329 191 11 12 322 78 397 6.76e-50 171
MS.gene051046.t1 AT1G06990 34.713 314 182 12 12 309 37 343 8.70e-50 170
MS.gene051046.t1 AT2G23540 33.524 349 201 12 11 336 47 387 1.01e-49 171
MS.gene051046.t1 AT3G50400 33.523 352 204 13 8 336 30 374 4.46e-49 169
MS.gene051046.t1 AT5G42170 32.812 320 195 10 13 319 51 363 1.98e-48 167
MS.gene051046.t1 AT5G37690 32.907 313 192 8 14 314 29 335 2.24e-47 164
MS.gene051046.t1 AT5G45950 31.288 326 204 10 2 315 28 345 2.57e-47 163
MS.gene051046.t1 AT5G33370 31.858 339 211 8 12 336 30 362 6.64e-47 162
MS.gene051046.t1 AT2G42990 32.915 319 190 10 9 311 25 335 1.73e-46 161
MS.gene051046.t1 AT2G40250 32.710 321 192 11 12 314 36 350 1.85e-46 161
MS.gene051046.t1 AT3G53100 32.177 317 195 9 12 314 29 339 3.20e-46 160
MS.gene051046.t1 AT1G29660 32.738 336 208 10 14 336 34 364 3.47e-46 160
MS.gene051046.t1 AT5G03820 33.648 318 191 10 12 314 33 345 7.09e-46 160
MS.gene051046.t1 AT3G16370 32.609 322 194 10 12 317 30 344 1.12e-45 159
MS.gene051046.t1 AT5G22810 34.385 317 191 8 12 314 34 347 2.07e-45 159
MS.gene051046.t1 AT5G03820 33.648 318 191 10 12 314 61 373 2.47e-45 159
MS.gene051046.t1 AT4G28780 29.586 338 220 8 12 336 31 363 2.72e-45 158
MS.gene051046.t1 AT1G20130 32.317 328 193 11 12 317 184 504 5.66e-45 160
MS.gene051046.t1 AT1G20130 32.317 328 193 11 12 317 204 524 6.35e-45 161
MS.gene051046.t1 AT1G75890 31.988 322 201 9 12 317 47 366 2.23e-44 156
MS.gene051046.t1 AT1G20135 33.123 317 191 10 3 309 17 322 3.19e-44 154
MS.gene051046.t1 AT3G04290 30.267 337 215 8 9 331 26 356 3.81e-44 155
MS.gene051046.t1 AT3G14210 32.143 336 199 11 12 333 36 356 5.18e-44 155
MS.gene051046.t1 AT1G75890 31.988 322 201 9 12 317 76 395 5.46e-44 155
MS.gene051046.t1 AT5G18430 31.487 343 209 10 12 336 28 362 1.57e-43 154
MS.gene051046.t1 AT1G54010 31.045 335 200 12 13 333 37 354 3.42e-43 153
MS.gene051046.t1 AT1G71250 30.357 336 214 8 12 333 41 370 4.25e-43 153
MS.gene051046.t1 AT1G54000 31.437 334 202 11 12 333 36 354 4.72e-43 153
MS.gene051046.t1 AT1G58430 32.407 324 193 11 12 317 35 350 5.89e-43 152
MS.gene051046.t1 AT5G03810 31.861 317 197 8 12 314 30 341 6.36e-43 152
MS.gene051046.t1 AT1G75890 30.746 335 201 9 12 317 47 379 8.59e-43 152
MS.gene051046.t1 AT5G37690 32.803 314 183 10 14 314 29 327 9.31e-43 151
MS.gene051046.t1 AT1G74460 31.646 316 200 7 14 317 25 336 9.59e-43 152
MS.gene051046.t1 AT1G54020 31.627 332 199 12 13 334 34 347 1.13e-42 152
MS.gene051046.t1 AT1G59406 32.051 312 193 10 12 311 30 334 1.63e-42 150
MS.gene051046.t1 AT1G59030 32.051 312 193 10 12 311 30 334 1.63e-42 150
MS.gene051046.t1 AT1G58725 32.051 312 193 10 12 311 30 334 1.63e-42 150
MS.gene051046.t1 AT2G19060 30.218 321 194 9 14 320 32 336 2.23e-42 150
MS.gene051046.t1 AT2G19050 30.149 335 204 9 14 336 33 349 3.51e-42 150
MS.gene051046.t1 AT5G63170 32.484 314 176 13 12 309 28 321 1.31e-41 148
MS.gene051046.t1 AT1G28640 30.029 343 203 9 8 321 31 365 5.89e-41 147
MS.gene051046.t1 AT3G14220 30.448 335 202 14 13 333 33 350 7.03e-41 147
MS.gene051046.t1 AT1G75900 31.193 327 194 11 12 319 43 357 7.26e-41 147
MS.gene051046.t1 AT5G55050 32.267 344 200 13 13 333 40 373 9.70e-41 147
MS.gene051046.t1 AT4G01130 31.268 355 189 10 12 327 34 372 6.58e-40 144
MS.gene051046.t1 AT5G45670 30.029 343 203 10 14 333 31 359 6.72e-40 144
MS.gene051046.t1 AT4G18970 30.636 346 203 11 14 336 30 361 6.73e-40 144
MS.gene051046.t1 AT2G03980 29.375 320 198 10 12 314 43 351 6.86e-40 144
MS.gene051046.t1 AT2G03980 29.375 320 198 10 12 314 43 351 6.86e-40 144
MS.gene051046.t1 AT2G03980 29.375 320 198 10 12 314 43 351 6.86e-40 144
MS.gene051046.t1 AT2G03980 29.375 320 198 10 12 314 43 351 6.86e-40 144
MS.gene051046.t1 AT4G30140 30.183 328 205 10 14 333 35 346 8.53e-40 143
MS.gene051046.t1 AT2G30310 30.124 322 203 10 12 317 34 349 1.55e-39 143
MS.gene051046.t1 AT1G29670 30.088 339 214 12 13 336 33 363 1.93e-39 143
MS.gene051046.t1 AT1G54030 35.484 248 140 8 12 257 52 281 2.67e-39 141
MS.gene051046.t1 AT4G18970 30.636 346 203 11 14 336 30 361 3.06e-39 143
MS.gene051046.t1 AT1G75880 31.661 319 202 8 12 317 52 367 3.58e-39 142
MS.gene051046.t1 AT4G10950 28.739 341 218 11 12 335 71 403 4.11e-39 143
MS.gene051046.t1 AT2G30220 30.745 322 201 10 12 317 33 348 4.23e-39 142
MS.gene051046.t1 AT5G15720 33.459 266 166 6 12 269 30 292 8.37e-39 140
MS.gene051046.t1 AT1G29670 30.000 340 215 12 12 336 100 431 9.87e-39 142
MS.gene051046.t1 AT2G24560 31.056 322 200 10 12 317 34 349 1.97e-38 140
MS.gene051046.t1 AT1G75880 31.447 318 203 8 12 317 52 366 1.99e-38 140
MS.gene051046.t1 AT1G58520 31.169 308 194 10 12 311 30 327 4.20e-38 139
MS.gene051046.t1 AT1G58525 31.169 308 194 10 12 311 30 327 4.20e-38 139
MS.gene051046.t1 AT1G75930 34.921 315 187 11 12 317 29 334 4.52e-37 136
MS.gene051046.t1 AT1G71691 33.588 262 165 5 12 269 55 311 6.01e-37 135
MS.gene051046.t1 AT4G10950 29.032 341 213 13 12 335 71 399 8.00e-37 137
MS.gene051046.t1 AT1G28650 29.532 342 204 10 8 320 33 366 1.20e-36 136
MS.gene051046.t1 AT2G19010 28.701 331 212 9 12 333 30 345 1.36e-36 135
MS.gene051046.t1 AT1G75920 31.833 311 198 9 12 315 29 332 1.44e-36 135
MS.gene051046.t1 AT2G19010 28.916 332 210 10 12 333 60 375 4.71e-36 134
MS.gene051046.t1 AT1G33811 30.564 337 216 12 12 333 34 367 1.71e-35 132
MS.gene051046.t1 AT2G31540 30.745 322 201 10 12 317 35 350 2.14e-35 132
MS.gene051046.t1 AT3G26430 32.653 343 189 11 12 320 31 365 2.52e-35 132
MS.gene051046.t1 AT3G43570 29.808 312 171 11 12 311 30 305 2.54e-35 131
MS.gene051046.t1 AT2G19050 31.746 252 149 6 14 256 33 270 2.54e-35 130
MS.gene051046.t1 AT1G23500 32.915 319 190 13 12 320 35 339 4.15e-35 131
MS.gene051046.t1 AT1G71691 29.329 283 188 5 63 336 3 282 1.36e-34 128
MS.gene051046.t1 AT2G27360 29.261 352 199 13 12 330 33 367 1.40e-34 130
MS.gene051046.t1 AT5G03610 32.399 321 179 12 7 308 38 339 2.20e-34 129
MS.gene051046.t1 AT3G43550 31.939 263 168 7 12 269 30 286 4.90e-34 127
MS.gene051046.t1 AT1G28660 28.739 341 208 10 8 320 31 364 6.58e-34 129
MS.gene051046.t1 AT1G75920 30.368 326 198 9 12 315 24 342 1.64e-33 127
MS.gene051046.t1 AT1G73610 29.487 312 203 7 12 317 35 335 1.80e-33 126
MS.gene051046.t1 AT5G33370 31.698 265 170 6 12 269 30 290 3.00e-33 125
MS.gene051046.t1 AT1G54790 29.462 353 191 11 9 320 29 364 3.13e-33 127
MS.gene051046.t1 AT1G75910 31.731 312 198 10 12 315 28 332 3.52e-33 125
MS.gene051046.t1 AT1G28670 28.571 343 207 10 8 320 31 365 5.58e-33 126
MS.gene051046.t1 AT3G09930 32.166 314 178 12 13 308 40 336 7.38e-33 125
MS.gene051046.t1 AT3G09930 32.166 314 178 12 13 308 40 336 7.38e-33 125
MS.gene051046.t1 AT4G01130 32.616 279 153 7 12 269 34 298 1.70e-32 124
MS.gene051046.t1 AT1G28660 28.739 341 207 11 8 320 31 363 1.75e-32 124
MS.gene051046.t1 AT1G28580 27.647 340 213 9 8 320 33 366 4.03e-32 124
MS.gene051046.t1 AT5G15720 28.322 286 192 5 64 336 48 333 4.66e-32 122
MS.gene051046.t1 AT1G28570 26.857 350 215 10 3 320 23 363 1.94e-31 122
MS.gene051046.t1 AT1G28600 28.107 338 205 10 12 320 31 359 2.64e-31 122
MS.gene051046.t1 AT1G28590 27.114 343 211 10 8 320 32 365 3.76e-30 119
MS.gene051046.t1 AT1G31550 28.080 349 205 12 12 330 36 368 4.22e-30 118
MS.gene051046.t1 AT1G67830 29.738 343 199 12 12 320 30 364 4.45e-30 118
MS.gene051046.t1 AT5G14450 29.769 346 193 10 12 320 41 373 6.12e-30 118
MS.gene051046.t1 AT5G03600 30.671 313 187 8 7 308 9 302 3.52e-29 114
MS.gene051046.t1 AT3G48460 28.070 342 197 12 13 321 39 364 3.72e-29 115
MS.gene051046.t1 AT4G16230 37.321 209 119 8 5 204 22 227 4.52e-29 112
MS.gene051046.t1 AT5G03600 30.671 313 187 8 7 308 44 337 4.68e-29 115
MS.gene051046.t1 AT2G24560 30.258 271 176 8 12 273 34 300 4.70e-29 114
MS.gene051046.t1 AT5G45910 30.233 344 202 11 9 320 27 364 6.47e-29 115
MS.gene051046.t1 AT1G75920 30.175 285 187 8 38 315 25 304 1.08e-28 113
MS.gene051046.t1 AT1G75920 28.896 308 180 8 12 315 29 301 1.18e-28 113
MS.gene051046.t1 AT1G54020 28.782 271 168 9 73 334 7 261 3.70e-27 108
MS.gene051046.t1 AT1G54020 28.782 271 168 9 73 334 7 261 3.70e-27 108
MS.gene051046.t1 AT1G54020 28.782 271 168 9 73 334 7 261 3.70e-27 108
MS.gene051046.t1 AT3G27950 30.088 339 200 11 12 323 32 360 4.22e-27 110
MS.gene051046.t1 AT2G04020 36.190 210 104 9 12 206 43 237 4.48e-27 107
MS.gene051046.t1 AT1G54790 27.222 360 204 11 2 320 21 363 7.13e-27 109
MS.gene051046.t1 AT3G62280 27.554 323 214 6 9 317 33 349 7.71e-27 109
MS.gene051046.t1 AT1G28610 26.648 349 210 12 12 330 31 363 9.37e-27 109
MS.gene051046.t1 AT1G09390 28.483 323 201 8 12 314 37 349 1.44e-26 108
MS.gene051046.t1 AT3G05180 27.666 347 209 11 12 325 36 373 1.45e-26 108
MS.gene051046.t1 AT2G04020 35.714 210 105 8 12 206 43 237 1.50e-26 107
MS.gene051046.t1 AT1G31550 27.378 347 207 12 12 330 36 365 3.54e-26 107
MS.gene051046.t1 AT1G56670 27.217 327 200 8 12 314 40 352 6.85e-26 106
MS.gene051046.t1 AT4G01130 28.669 293 167 8 70 327 1 286 1.16e-25 104
MS.gene051046.t1 AT1G53970 59.211 76 31 0 6 81 14 89 2.40e-24 95.5
MS.gene051046.t1 AT1G53970 59.211 76 31 0 6 81 14 89 2.40e-24 95.5
MS.gene051046.t1 AT1G54020 29.524 210 134 5 134 334 8 212 4.13e-24 99.0
MS.gene051046.t1 AT3G14210 31.905 210 128 6 136 333 22 228 5.42e-24 99.4
MS.gene051046.t1 AT1G54790 25.389 386 204 12 2 320 21 389 1.13e-21 95.5
MS.gene051046.t1 AT3G62280 28.839 267 175 6 9 271 33 288 8.20e-21 91.3
MS.gene051046.t1 AT2G31550 29.756 205 124 6 114 307 4 199 2.22e-20 88.6
MS.gene051046.t1 AT1G56670 27.273 275 166 8 12 269 40 297 3.19e-19 87.0
MS.gene051046.t1 AT1G28600 36.054 147 77 6 16 150 35 176 1.56e-17 80.5
MS.gene051046.t1 AT2G36325 29.154 319 186 13 9 308 44 341 1.68e-17 82.8
MS.gene051046.t1 AT1G28580 25.352 284 180 8 63 320 8 285 2.02e-17 82.0
MS.gene051046.t1 AT4G16233 30.400 125 77 2 217 333 5 127 9.38e-15 70.9
MS.gene051046.t1 AT1G28610 41.573 89 47 2 16 101 35 121 1.72e-13 69.7

Find 68 sgRNAs with CRISPR-Local

Find 124 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATTTGGGTTGCTTAATT+TGG 0.083505 8.1:+77656642 MS.gene051046:CDS
GACCTAGGTGGAAGAAAATT+TGG 0.128289 8.1:+77656628 MS.gene051046:CDS
CATGGTGCACTATTCATATT+TGG 0.201400 8.1:+77655088 MS.gene051046:CDS
GAATTTATTCAGGGAGAAAT+TGG 0.207250 8.1:+77656337 MS.gene051046:CDS
ATTTCCATTCCATATCAATT+TGG 0.257049 8.1:-77657115 None:intergenic
AAAAGGTAAAGAATTTATTC+AGG 0.269859 8.1:+77656327 MS.gene051046:CDS
AATATTTCGCCAAATTGATA+TGG 0.273243 8.1:+77657106 MS.gene051046:CDS
TTGCTTAATTTGGGTCCTTT+TGG 0.281909 8.1:+77656652 MS.gene051046:CDS
GGAGATTCACTATTTGATAA+TGG 0.318592 8.1:+77655109 MS.gene051046:CDS
TTAACTCCATAGATATATTC+AGG 0.319254 8.1:-77656106 None:intergenic
CAATTTGTTGATATTGTCAT+TGG 0.319994 8.1:+77656479 MS.gene051046:CDS
CAATGACTATGGTAGTCTTC+TGG 0.327833 8.1:+77656418 MS.gene051046:CDS
AATAGCTGCTTTAGATTGTA+AGG 0.329509 8.1:-77657153 None:intergenic
CAATACAAGCATTGGTAATC+AGG 0.334657 8.1:+77655147 MS.gene051046:CDS
AAATTTGGGTTGCTTAATTT+GGG 0.339152 8.1:+77656643 MS.gene051046:CDS
AATAGTGCACCATGTTTCTT+AGG 0.357221 8.1:-77655079 None:intergenic
GGGTGACCTGGATGCAAATA+TGG 0.373892 8.1:-77656085 None:intergenic
CTATCCTAGCATAAGAATAT+TGG 0.377524 8.1:+77656678 MS.gene051046:CDS
GGTAGAAGAACACCAGAGTT+TGG 0.379836 8.1:-77656443 None:intergenic
ACTAAACAAGTATACAGATT+TGG 0.388322 8.1:-77656387 None:intergenic
ATAAGAATATTGGTTAATAA+TGG 0.401415 8.1:+77656688 MS.gene051046:CDS
ATGAAGTATCCTTCAAACTA+TGG 0.406479 8.1:+77656856 MS.gene051046:CDS
ACCTAGGTGGAAGAAAATTT+GGG 0.409923 8.1:+77656629 MS.gene051046:CDS
ACAAATTGTTGATGATCAAC+AGG 0.420612 8.1:-77656464 None:intergenic
AAAATCGTACCAACAAAATC+TGG 0.421278 8.1:-77655241 None:intergenic
ACTTTCTTTAAGTACCCTTC+TGG 0.425473 8.1:+77655193 MS.gene051046:CDS
GGTCACCCTGAATATATCTA+TGG 0.427944 8.1:+77656100 MS.gene051046:CDS
TCTGTATACTTGTTTAGTGT+TGG 0.434855 8.1:+77656392 MS.gene051046:CDS
AAGCTAGAGAACCAGCTAAA+GGG 0.442204 8.1:+77656787 MS.gene051046:CDS
AATATTTGAACCCCTTTAGC+TGG 0.444991 8.1:-77656798 None:intergenic
TTAACCAATATTCTTATGCT+AGG 0.460332 8.1:-77656682 None:intergenic
AAAGGTAAAGAATTTATTCA+GGG 0.463738 8.1:+77656328 MS.gene051046:CDS
AATTTATTCAGGGAGAAATT+GGG 0.469419 8.1:+77656338 MS.gene051046:CDS
AAATTGATATGGAATGGAAA+TGG 0.479120 8.1:+77657117 MS.gene051046:CDS
TTCGCCAAATTGATATGGAA+TGG 0.491966 8.1:+77657111 MS.gene051046:CDS
AACTACATCAATACAAGCAT+TGG 0.493799 8.1:+77655139 MS.gene051046:CDS
TATTGATTAGCTTTCTCTGT+AGG 0.500420 8.1:-77657087 None:intergenic
CAGGCAAATTATCCTCCCTA+TGG 0.501668 8.1:+77655166 MS.gene051046:CDS
TGCAAATATGGTGGAAGTAG+AGG 0.513679 8.1:-77656073 None:intergenic
GCATATTGTGGAAGTGGCTG+TGG 0.516268 8.1:+77657000 MS.gene051046:CDS
TTATAGGAAATTTATGACCT+AGG 0.517577 8.1:+77656613 MS.gene051046:intron
TTAAAGAAAGTCTGTCCATA+GGG 0.522108 8.1:-77655181 None:intergenic
GAATGTGTACCATAGTTTGA+AGG 0.527964 8.1:-77656865 None:intergenic
AGTGTTGGAAGCAATGACTA+TGG 0.531068 8.1:+77656407 MS.gene051046:CDS
CTTCCACCATATTTGCATCC+AGG 0.531243 8.1:+77656079 MS.gene051046:CDS
AAAGCTAGAGAACCAGCTAA+AGG 0.532853 8.1:+77656786 MS.gene051046:CDS
TTGGTTAATAATGGAACAGA+AGG 0.533866 8.1:+77656697 MS.gene051046:CDS
AGTCTTCTGGATCCAAACTC+TGG 0.534866 8.1:+77656431 MS.gene051046:CDS
CTTAAAGAAAGTCTGTCCAT+AGG 0.538225 8.1:-77655182 None:intergenic
GCACTCTCTCAAACATCTCA+AGG 0.540073 8.1:+77656151 MS.gene051046:CDS
TGGTGGAAGTAGAGGCAACT+TGG 0.541652 8.1:-77656065 None:intergenic
GAAGCAAGTGTAGCATATTG+TGG 0.546741 8.1:+77656988 MS.gene051046:CDS
ATGCTAGGATAGCAGCCAAA+AGG 0.547875 8.1:-77656667 None:intergenic
TAGATATATTCAGGGTGACC+TGG 0.550497 8.1:-77656097 None:intergenic
TAACTCCATAGATATATTCA+GGG 0.561814 8.1:-77656105 None:intergenic
AGTGTAGCATATTGTGGAAG+TGG 0.575078 8.1:+77656994 MS.gene051046:CDS
AGCTAGAGAACCAGCTAAAG+GGG 0.587898 8.1:+77656788 MS.gene051046:CDS
CATAGATGAAATTTCAGCAG+TGG 0.592459 8.1:+77656726 MS.gene051046:CDS
CCGTCAGAAAATCTACCAGA+AGG 0.595079 8.1:-77655208 None:intergenic
ATACTTTGATGACATTTGTG+AGG 0.609808 8.1:-77656505 None:intergenic
TATTGTGGAAGTGGCTGTGG+AGG 0.617346 8.1:+77657003 MS.gene051046:CDS
CGTCAGAAAATCTACCAGAA+GGG 0.641192 8.1:-77655207 None:intergenic
TAGGAAATTTATGACCTAGG+TGG 0.647961 8.1:+77656616 MS.gene051046:intron
AAGAAAGTCTGTCCATAGGG+AGG 0.658983 8.1:-77655178 None:intergenic
ATGGAAATGGCAGTGTCACA+TGG 0.664922 8.1:+77657130 MS.gene051046:CDS
AATTGCTTGCCTAAGAAACA+TGG 0.674205 8.1:+77655070 MS.gene051046:CDS
TGACCTGGATGCAAATATGG+TGG 0.680616 8.1:-77656082 None:intergenic
ATTGTGGAAGTGGCTGTGGA+GGG 0.687047 8.1:+77657004 MS.gene051046:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATGATATGTTTATTTAT+AGG + chr8.1:77656597-77656616 MS.gene051046:intron 10.0%
!!! ACATATGTTTATTTTTTTTT+AGG + chr8.1:77655283-77655302 MS.gene051046:intron 10.0%
!!! ATATGTTTATTTTTTTTTAG+GGG + chr8.1:77655285-77655304 MS.gene051046:intron 10.0%
!!! CATATGTTTATTTTTTTTTA+GGG + chr8.1:77655284-77655303 MS.gene051046:intron 10.0%
!!! TATGTTTTGAAAAAAAAAAT+TGG - chr8.1:77655268-77655287 None:intergenic 10.0%
!!! TTTATGTTTGATAAATTTTT+GGG + chr8.1:77656954-77656973 MS.gene051046:intron 10.0%
!!! TTTTATGTTTGATAAATTTT+TGG + chr8.1:77656953-77656972 MS.gene051046:intron 10.0%
!!! AAAAAAGTTAACTTTTTATC+CGG + chr8.1:77655675-77655694 MS.gene051046:intron 15.0%
!!! AAATATAGTTTTCATTTTAG+AGG - chr8.1:77656219-77656238 None:intergenic 15.0%
!!! AAGTTAACTTTTTTTAAAGA+AGG - chr8.1:77655669-77655688 None:intergenic 15.0%
!!! ATAAGAATATTGGTTAATAA+TGG + chr8.1:77656688-77656707 MS.gene051046:CDS 15.0%
!! AAAAGGTAAAGAATTTATTC+AGG + chr8.1:77656327-77656346 MS.gene051046:CDS 20.0%
!! AAAGGTAAAGAATTTATTCA+GGG + chr8.1:77656328-77656347 MS.gene051046:CDS 20.0%
!! TCAGTTGAGTTATTTAAAAA+AGG + chr8.1:77656310-77656329 MS.gene051046:CDS 20.0%
!!! AAAAAGTTAACTTTTTATCC+GGG + chr8.1:77655676-77655695 MS.gene051046:intron 20.0%
!!! TTTTGTTTTCTTAGAAATCA+AGG - chr8.1:77656005-77656024 None:intergenic 20.0%
! AAATTGATATGGAATGGAAA+TGG + chr8.1:77657117-77657136 MS.gene051046:CDS 25.0%
! AATATTTCGCCAAATTGATA+TGG + chr8.1:77657106-77657125 MS.gene051046:CDS 25.0%
! AATTTATTCAGGGAGAAATT+GGG + chr8.1:77656338-77656357 MS.gene051046:CDS 25.0%
! ACTAAACAAGTATACAGATT+TGG - chr8.1:77656390-77656409 None:intergenic 25.0%
! AGAAAAATCATCTTAGACTT+TGG - chr8.1:77655508-77655527 None:intergenic 25.0%
! ATTTCCATTCCATATCAATT+TGG - chr8.1:77657118-77657137 None:intergenic 25.0%
! GAAAAATCATCTTAGACTTT+GGG - chr8.1:77655507-77655526 None:intergenic 25.0%
! TAACTCCATAGATATATTCA+GGG - chr8.1:77656108-77656127 None:intergenic 25.0%
! TTAACCAATATTCTTATGCT+AGG - chr8.1:77656685-77656704 None:intergenic 25.0%
! TTAACTCCATAGATATATTC+AGG - chr8.1:77656109-77656128 None:intergenic 25.0%
! TTATAGGAAATTTATGACCT+AGG + chr8.1:77656613-77656632 MS.gene051046:intron 25.0%
! TTGTAACACTCTAATCAAAA+TGG - chr8.1:77655796-77655815 None:intergenic 25.0%
! TTGTTAGCACAAAAAAATCA+AGG - chr8.1:77656546-77656565 None:intergenic 25.0%
!! TTCGATTGTTGTTAACATAT+AGG + chr8.1:77656271-77656290 MS.gene051046:intron 25.0%
!!! AAAATTTGGGTTGCTTAATT+TGG + chr8.1:77656642-77656661 MS.gene051046:CDS 25.0%
!!! AAATTTGGGTTGCTTAATTT+GGG + chr8.1:77656643-77656662 MS.gene051046:CDS 25.0%
!!! CAATTTGTTGATATTGTCAT+TGG + chr8.1:77656479-77656498 MS.gene051046:CDS 25.0%
!!! TGTTTGATAAATTTTTGGGA+AGG + chr8.1:77656958-77656977 MS.gene051046:intron 25.0%
AAAATCGTACCAACAAAATC+TGG - chr8.1:77655244-77655263 None:intergenic 30.0%
AACTACATCAATACAAGCAT+TGG + chr8.1:77655139-77655158 MS.gene051046:CDS 30.0%
AGAACTCCTAAAAAAAGTGA+CGG - chr8.1:77655537-77655556 None:intergenic 30.0%
AGACTCCTAACAATTATGTA+GGG - chr8.1:77655363-77655382 None:intergenic 30.0%
ATTGTCAAAAAAACCTGAAC+AGG + chr8.1:77655950-77655969 MS.gene051046:intron 30.0%
CTATCCTAGCATAAGAATAT+TGG + chr8.1:77656678-77656697 MS.gene051046:CDS 30.0%
GAATTTATTCAGGGAGAAAT+TGG + chr8.1:77656337-77656356 MS.gene051046:CDS 30.0%
GGAGATTCACTATTTGATAA+TGG + chr8.1:77655109-77655128 MS.gene051046:CDS 30.0%
GTAATCTCTAGTATATCATG+TGG - chr8.1:77655567-77655586 None:intergenic 30.0%
TCTGTATACTTGTTTAGTGT+TGG + chr8.1:77656392-77656411 MS.gene051046:CDS 30.0%
TGCATGATGTAGTCTAATTA+AGG + chr8.1:77655616-77655635 MS.gene051046:intron 30.0%
TTAAAGAAAGTCTGTCCATA+GGG - chr8.1:77655184-77655203 None:intergenic 30.0%
! AATAACTCAACTGAGTTTTC+AGG - chr8.1:77656304-77656323 None:intergenic 30.0%
! AATAGCTGCTTTAGATTGTA+AGG - chr8.1:77657156-77657175 None:intergenic 30.0%
! ATACTTTGATGACATTTGTG+AGG - chr8.1:77656508-77656527 None:intergenic 30.0%
! ATGAAGTATCCTTCAAACTA+TGG + chr8.1:77656856-77656875 MS.gene051046:CDS 30.0%
! TATGGAGTTAATTTTGCATC+AGG + chr8.1:77656118-77656137 MS.gene051046:CDS 30.0%
! TTGGTTAATAATGGAACAGA+AGG + chr8.1:77656697-77656716 MS.gene051046:CDS 30.0%
!! ACAAATTGTTGATGATCAAC+AGG - chr8.1:77656467-77656486 None:intergenic 30.0%
!! TATTGATTAGCTTTCTCTGT+AGG - chr8.1:77657090-77657109 None:intergenic 30.0%
!!! TTCATTCCGTCACTTTTTTT+AGG + chr8.1:77655528-77655547 MS.gene051046:intron 30.0%
AATAGTGCACCATGTTTCTT+AGG - chr8.1:77655082-77655101 None:intergenic 35.0%
AATATTTGAACCCCTTTAGC+TGG - chr8.1:77656801-77656820 None:intergenic 35.0%
AATTGCTTGCCTAAGAAACA+TGG + chr8.1:77655070-77655089 MS.gene051046:CDS 35.0%
ACATAATTGTTAGGAGTCTG+AGG + chr8.1:77655364-77655383 MS.gene051046:intron 35.0%
ACCTAGGTGGAAGAAAATTT+GGG + chr8.1:77656629-77656648 MS.gene051046:CDS 35.0%
ACTTTCTTTAAGTACCCTTC+TGG + chr8.1:77655193-77655212 MS.gene051046:CDS 35.0%
ATATCTCGATAACAAGAGAG+AGG + chr8.1:77655414-77655433 MS.gene051046:intron 35.0%
ATCCTCCCTACATAATTGTT+AGG + chr8.1:77655355-77655374 MS.gene051046:intron 35.0%
ATCTCTAGTATATCATGTGG+CGG - chr8.1:77655564-77655583 None:intergenic 35.0%
CAGACTCCTAACAATTATGT+AGG - chr8.1:77655364-77655383 None:intergenic 35.0%
CATAATTGTTAGGAGTCTGA+GGG + chr8.1:77655365-77655384 MS.gene051046:intron 35.0%
CATAGATGAAATTTCAGCAG+TGG + chr8.1:77656726-77656745 MS.gene051046:CDS 35.0%
CATGGTGCACTATTCATATT+TGG + chr8.1:77655088-77655107 MS.gene051046:CDS 35.0%
CTTAAAGAAAGTCTGTCCAT+AGG - chr8.1:77655185-77655204 None:intergenic 35.0%
GAATGTGTACCATAGTTTGA+AGG - chr8.1:77656868-77656887 None:intergenic 35.0%
TAGGAAATTTATGACCTAGG+TGG + chr8.1:77656616-77656635 MS.gene051046:intron 35.0%
TATCTCGATAACAAGAGAGA+GGG + chr8.1:77655415-77655434 MS.gene051046:intron 35.0%
TTCGCCAAATTGATATGGAA+TGG + chr8.1:77657111-77657130 MS.gene051046:CDS 35.0%
! ACACAGTAGTACTAGTCTAT+AGG - chr8.1:77655982-77656001 None:intergenic 35.0%
! ACTTTTTATCCGGGAAATTG+TGG + chr8.1:77655685-77655704 MS.gene051046:intron 35.0%
! GAGTTAATTTTGCATCAGGA+GGG + chr8.1:77656122-77656141 MS.gene051046:CDS 35.0%
! TTAGACTTTGGGAGAATATG+TGG - chr8.1:77655496-77655515 None:intergenic 35.0%
!! CAATACAAGCATTGGTAATC+AGG + chr8.1:77655147-77655166 MS.gene051046:CDS 35.0%
!! TATTGATTCGTTGTTTCTCC+TGG - chr8.1:77655395-77655414 None:intergenic 35.0%
!! TTGCTTAATTTGGGTCCTTT+TGG + chr8.1:77656652-77656671 MS.gene051046:CDS 35.0%
AAAGCTAGAGAACCAGCTAA+AGG + chr8.1:77656786-77656805 MS.gene051046:CDS 40.0%
AAGCTAGAGAACCAGCTAAA+GGG + chr8.1:77656787-77656806 MS.gene051046:CDS 40.0%
ACATCACTACCACAATTTCC+CGG - chr8.1:77655697-77655716 None:intergenic 40.0%
AGTGTAGCATATTGTGGAAG+TGG + chr8.1:77656994-77657013 MS.gene051046:CDS 40.0%
CAATGACTATGGTAGTCTTC+TGG + chr8.1:77656418-77656437 MS.gene051046:CDS 40.0%
CGTCAGAAAATCTACCAGAA+GGG - chr8.1:77655210-77655229 None:intergenic 40.0%
CTATAGGACAAATCCTGTTC+AGG - chr8.1:77655966-77655985 None:intergenic 40.0%
CTCCATAACCATAAGAGAGA+GGG + chr8.1:77655468-77655487 MS.gene051046:intron 40.0%
CTCCTAACAATTATGTAGGG+AGG - chr8.1:77655360-77655379 None:intergenic 40.0%
GAAGCAAGTGTAGCATATTG+TGG + chr8.1:77656988-77657007 MS.gene051046:CDS 40.0%
GACCTAGGTGGAAGAAAATT+TGG + chr8.1:77656628-77656647 MS.gene051046:CDS 40.0%
GGTCACCCTGAATATATCTA+TGG + chr8.1:77656100-77656119 MS.gene051046:CDS 40.0%
TAGATATATTCAGGGTGACC+TGG - chr8.1:77656100-77656119 None:intergenic 40.0%
! ACCCAAATTTTCTTCCACCT+AGG - chr8.1:77656633-77656652 None:intergenic 40.0%
! AGTGTTGGAAGCAATGACTA+TGG + chr8.1:77656407-77656426 MS.gene051046:CDS 40.0%
! CCTTCTGGTAGATTTTCTGA+CGG + chr8.1:77655208-77655227 MS.gene051046:CDS 40.0%
! CGCATGATACCAGATTTTGT+TGG + chr8.1:77655232-77655251 MS.gene051046:CDS 40.0%
! GGAGTTAATTTTGCATCAGG+AGG + chr8.1:77656121-77656140 MS.gene051046:CDS 40.0%
! TGCAAATATGGTGGAAGTAG+AGG - chr8.1:77656076-77656095 None:intergenic 40.0%
AAGAAAGTCTGTCCATAGGG+AGG - chr8.1:77655181-77655200 None:intergenic 45.0%
AGCTAGAGAACCAGCTAAAG+GGG + chr8.1:77656788-77656807 MS.gene051046:CDS 45.0%
AGTCTTCTGGATCCAAACTC+TGG + chr8.1:77656431-77656450 MS.gene051046:CDS 45.0%
ATGCTAGGATAGCAGCCAAA+AGG - chr8.1:77656670-77656689 None:intergenic 45.0%
ATGGAAATGGCAGTGTCACA+TGG + chr8.1:77657130-77657149 MS.gene051046:CDS 45.0%
CACATGATGTTGTCGAGTGA+CGG + chr8.1:77655755-77655774 MS.gene051046:intron 45.0%
CAGGCAAATTATCCTCCCTA+TGG + chr8.1:77655166-77655185 MS.gene051046:CDS 45.0%
CCGTCAGAAAATCTACCAGA+AGG - chr8.1:77655211-77655230 None:intergenic 45.0%
CTTCCACCATATTTGCATCC+AGG + chr8.1:77656079-77656098 MS.gene051046:CDS 45.0%
GCACTCTCTCAAACATCTCA+AGG + chr8.1:77656151-77656170 MS.gene051046:CDS 45.0%
GCTCCATAACCATAAGAGAG+AGG + chr8.1:77655467-77655486 MS.gene051046:intron 45.0%
GGTAGAAGAACACCAGAGTT+TGG - chr8.1:77656446-77656465 None:intergenic 45.0%
TGACCTGGATGCAAATATGG+TGG - chr8.1:77656085-77656104 None:intergenic 45.0%
! AATTTTGCATCAGGAGGGTC+TGG + chr8.1:77656127-77656146 MS.gene051046:CDS 45.0%
! GAGTGACGGAACTTAGCAAA+GGG + chr8.1:77655769-77655788 MS.gene051046:intron 45.0%
ATTGTGGAAGTGGCTGTGGA+GGG + chr8.1:77657004-77657023 MS.gene051046:CDS 50.0%
CGCCCTCTCTCTTATGGTTA+TGG - chr8.1:77655473-77655492 None:intergenic 50.0%
CGTCACTCGACAACATCATG+TGG - chr8.1:77655757-77655776 None:intergenic 50.0%
GCATATTGTGGAAGTGGCTG+TGG + chr8.1:77657000-77657019 MS.gene051046:CDS 50.0%
GGGTGACCTGGATGCAAATA+TGG - chr8.1:77656088-77656107 None:intergenic 50.0%
TATTGTGGAAGTGGCTGTGG+AGG + chr8.1:77657003-77657022 MS.gene051046:CDS 50.0%
TGGTGGAAGTAGAGGCAACT+TGG - chr8.1:77656068-77656087 None:intergenic 50.0%
! CGAGTGACGGAACTTAGCAA+AGG + chr8.1:77655768-77655787 MS.gene051046:intron 50.0%
ATGTGGCGCCCTCTCTCTTA+TGG - chr8.1:77655479-77655498 None:intergenic 55.0%
TAGGAGTCTGAGGGAGTTCC+AGG + chr8.1:77655374-77655393 MS.gene051046:intron 55.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 77655061 77657185 77655061 ID=MS.gene051046
chr8.1 mRNA 77655061 77657185 77655061 ID=MS.gene051046.t1;Parent=MS.gene051046
chr8.1 exon 77655061 77655253 77655061 ID=MS.gene051046.t1.exon1;Parent=MS.gene051046.t1
chr8.1 CDS 77655061 77655253 77655061 ID=cds.MS.gene051046.t1;Parent=MS.gene051046.t1
chr8.1 exon 77656056 77656177 77656056 ID=MS.gene051046.t1.exon2;Parent=MS.gene051046.t1
chr8.1 CDS 77656056 77656177 77656056 ID=cds.MS.gene051046.t1;Parent=MS.gene051046.t1
chr8.1 exon 77656293 77656523 77656293 ID=MS.gene051046.t1.exon3;Parent=MS.gene051046.t1
chr8.1 CDS 77656293 77656523 77656293 ID=cds.MS.gene051046.t1;Parent=MS.gene051046.t1
chr8.1 exon 77656619 77656877 77656619 ID=MS.gene051046.t1.exon4;Parent=MS.gene051046.t1
chr8.1 CDS 77656619 77656877 77656619 ID=cds.MS.gene051046.t1;Parent=MS.gene051046.t1
chr8.1 exon 77656980 77657185 77656980 ID=MS.gene051046.t1.exon5;Parent=MS.gene051046.t1
chr8.1 CDS 77656980 77657185 77656980 ID=cds.MS.gene051046.t1;Parent=MS.gene051046.t1
Gene Sequence

>MS.gene051046

ATGATCATGAATTGCTTGCCTAAGAAACATGGTGCACTATTCATATTTGGAGATTCACTATTTGATAATGGTAACAACAACTACATCAATACAAGCATTGGTAATCAGGCAAATTATCCTCCCTATGGACAGACTTTCTTTAAGTACCCTTCTGGTAGATTTTCTGACGGACGCATGATACCAGATTTTGTTGGTACGATTTTTCCAATTTTTTTTTTCAAAACATATGTTTATTTTTTTTTAGGGGAAAACATATGTTTATTTTATTGTGTAGTTAGTATGTAGATTCAAATTATCCTCCCTACATAATTGTTAGGAGTCTGAGGGAGTTCCAGGAGAAACAACGAATCAATATATCTCGATAACAAGAGAGAGGGAGAGAGATAACACATCTCTACTCAATTTTGCTCCATAACCATAAGAGAGAGGGCGCCACATATTCTCCCAAAGTCTAAGATGATTTTTCTTTCATTCCGTCACTTTTTTTAGGAGTTCTCATTCCGCCACATGATATACTAGAGATTACATAGATTGTTACATTTTCATTTAACGTGTTGCATGATGTAGTCTAATTAAGGAACTTAGCTATGACATTAACTTTCTATCCTTCTTTAAAAAAAGTTAACTTTTTATCCGGGAAATTGTGGTAGTGATGTAGAGATTACTTAGATTGTAACATTTTCATTTAACGTACCACATGATGTTGTCGAGTGACGGAACTTAGCAAAGGGACCATTTTGATTAGAGTGTTACAATGTTGTAGACAAGATTGTTAATTCGTAAAAGTGAAAAACGAATTTAACTGACAATTATCATTTCAAGAAAAAAGAAAATACAAATAAATTTCGTCGCTAAATTTAGCTATGAGAAACAACATATGCACTATATGATTGTCAAAAAAACCTGAACAGGATTTGTCCTATAGACTAGTACTACTGTGTCCTTGATTTCTAAGAAAACAAAAACATAACAAAATAGTTGTCTAATTTTTTCAGCTGAGTATGCCAAGTTGCCTCTACTTCCACCATATTTGCATCCAGGTCACCCTGAATATATCTATGGAGTTAATTTTGCATCAGGAGGGTCTGGTGCACTCTCTCAAACATCTCAAGGAAGTGTAAGCTCATCTTTAAATTCATTGAATATCTTTTTCTACCTCTAAAATGAAAACTATATTTATAGTATATACTAATATAAACATTATCTGAACTTCGATTGTTGTTAACATATAGGTGATAGACCTGAAAACTCAGTTGAGTTATTTAAAAAAGGTAAAGAATTTATTCAGGGAGAAATTGGGACATGAAAAAACAAAAGAACTGTTGTCCAAATCTGTATACTTGTTTAGTGTTGGAAGCAATGACTATGGTAGTCTTCTGGATCCAAACTCTGGTGTTCTTCTACCTGTTGATCATCAACAATTTGTTGATATTGTCATTGGAAACCTCACAAATGTCATCAAAGTATGTAAAGTTTTATAAGCCTTGATTTTTTTGTGCTAACAATAGATATGATATTAATTTTGTGCTAACAATATATATGATATGTTTATTTATAGGAAATTTATGACCTAGGTGGAAGAAAATTTGGGTTGCTTAATTTGGGTCCTTTTGGCTGCTATCCTAGCATAAGAATATTGGTTAATAATGGAACAGAAGGTGAATGCATAGATGAAATTTCAGCAGTGGCAAGACTACACAACAATAAACTCACAAAAATGCTTCAAAAGCTAGAGAACCAGCTAAAGGGGTTCAAATATTCAATCAATGATTTCTACAGTGCATTTTCTGAAGTGATGAAGTATCCTTCAAACTATGGTACACATTCATGAAAAAATATTAATTATTATGTAGTGAGTTTTATGTGTGAGCATATATACTAATCATTGTTAATTTTATGTTTGATAAATTTTTGGGAAGGCTTTAAAGAAGCAAGTGTAGCATATTGTGGAAGTGGCTGTGGAGGGAACAAAGAATATGAGTTATGTGACAATGTGAATGAACATGTATTCTTTGACACTCATCATCCTACAGAGAAAGCTAATCAATATTTCGCCAAATTGATATGGAATGGAAATGGCAGTGTCACATGGCCTTACAATCTAAAGCAGCTATTTGAAATTTGA
Protein sequence

>MS.gene051046.t1

MIMNCLPKKHGALFIFGDSLFDNGNNNYINTSIGNQANYPPYGQTFFKYPSGRFSDGRMIPDFVAEYAKLPLLPPYLHPGHPEYIYGVNFASGGSGALSQTSQGSVIDLKTQLSYLKKVKNLFREKLGHEKTKELLSKSVYLFSVGSNDYGSLLDPNSGVLLPVDHQQFVDIVIGNLTNVIKEIYDLGGRKFGLLNLGPFGCYPSIRILVNNGTEGECIDEISAVARLHNNKLTKMLQKLENQLKGFKYSINDFYSAFSEVMKYPSNYGFKEASVAYCGSGCGGNKEYELCDNVNEHVFFDTHHPTEKANQYFAKLIWNGNGSVTWPYNLKQLFEI