Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004757.t1 | XP_013468658.1 | 98.6 | 759 | 11 | 0 | 1 | 759 | 1 | 759 | 0.00E+00 | 1436.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004757.t1 | Q0WPQ2 | 58.2 | 782 | 291 | 12 | 1 | 758 | 1 | 770 | 1.5e-234 | 813.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004757.t1 | A0A072VX71 | 98.6 | 759 | 11 | 0 | 1 | 759 | 1 | 759 | 0.0e+00 | 1436.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene004757.t1 | TR | Others |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene004757 | MS.gene025978 | PPI |
| MS.gene004757 | MS.gene74904 | PPI |
| MS.gene004757 | MS.gene005062 | PPI |
| MS.gene004757 | MS.gene050576 | PPI |
| MS.gene004757 | MS.gene005060 | PPI |
| MS.gene004757 | MS.gene058783 | PPI |
| MS.gene004757 | MS.gene024512 | PPI |
| MS.gene004757 | MS.gene22870 | PPI |
| MS.gene004757 | MS.gene07610 | PPI |
| MS.gene004757 | MS.gene74902 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004757.t1 | MTR_1g073840 | 98.551 | 759 | 11 | 0 | 1 | 759 | 1 | 759 | 0.0 | 1541 |
| MS.gene004757.t1 | MTR_1g044210 | 71.278 | 759 | 211 | 6 | 1 | 754 | 1 | 757 | 0.0 | 1067 |
| MS.gene004757.t1 | MTR_7g116330 | 57.625 | 741 | 301 | 6 | 23 | 757 | 28 | 761 | 0.0 | 885 |
| MS.gene004757.t1 | MTR_1g079790 | 56.876 | 749 | 305 | 9 | 19 | 757 | 18 | 758 | 0.0 | 840 |
| MS.gene004757.t1 | MTR_1g079790 | 58.566 | 572 | 225 | 7 | 19 | 581 | 18 | 586 | 0.0 | 653 |
| MS.gene004757.t1 | MTR_4g031150 | 41.970 | 741 | 397 | 18 | 29 | 750 | 54 | 780 | 1.14e-176 | 526 |
| MS.gene004757.t1 | MTR_7g109150 | 40.729 | 631 | 349 | 13 | 29 | 645 | 5 | 624 | 1.60e-129 | 399 |
| MS.gene004757.t1 | MTR_4g134880 | 86.667 | 75 | 9 | 1 | 686 | 759 | 1 | 75 | 2.54e-35 | 128 |
| MS.gene004757.t1 | MTR_8g080770 | 31.579 | 133 | 82 | 3 | 631 | 755 | 728 | 859 | 7.83e-15 | 79.0 |
| MS.gene004757.t1 | MTR_8g080770 | 22.959 | 392 | 244 | 10 | 344 | 690 | 262 | 640 | 1.27e-13 | 75.1 |
| MS.gene004757.t1 | MTR_8g080770 | 31.579 | 133 | 82 | 3 | 631 | 755 | 837 | 968 | 8.80e-15 | 79.0 |
| MS.gene004757.t1 | MTR_8g080770 | 22.959 | 392 | 244 | 10 | 344 | 690 | 371 | 749 | 9.52e-14 | 75.9 |
| MS.gene004757.t1 | MTR_5g022470 | 25.369 | 339 | 209 | 8 | 355 | 665 | 499 | 821 | 1.29e-14 | 78.6 |
| MS.gene004757.t1 | MTR_5g022470 | 25.369 | 339 | 209 | 8 | 355 | 665 | 499 | 821 | 1.84e-14 | 78.2 |
| MS.gene004757.t1 | MTR_3g085130 | 30.534 | 131 | 83 | 3 | 631 | 754 | 692 | 821 | 5.27e-14 | 76.3 |
| MS.gene004757.t1 | MTR_3g085130 | 21.888 | 466 | 307 | 11 | 344 | 758 | 216 | 675 | 2.37e-13 | 74.3 |
| MS.gene004757.t1 | MTR_3g085130 | 30.534 | 131 | 83 | 3 | 631 | 754 | 902 | 1031 | 6.12e-14 | 76.3 |
| MS.gene004757.t1 | MTR_3g085130 | 21.888 | 466 | 307 | 11 | 344 | 758 | 426 | 885 | 7.65e-14 | 76.3 |
| MS.gene004757.t1 | MTR_5g097410 | 21.778 | 450 | 294 | 11 | 344 | 741 | 596 | 1039 | 2.02e-13 | 74.7 |
| MS.gene004757.t1 | MTR_8g075340 | 22.687 | 335 | 224 | 8 | 355 | 665 | 461 | 784 | 2.09e-13 | 74.7 |
| MS.gene004757.t1 | MTR_8g106150 | 22.653 | 490 | 290 | 13 | 344 | 757 | 362 | 838 | 2.49e-12 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene004757.t1 | AT3G23150 | 59.847 | 782 | 278 | 13 | 1 | 758 | 1 | 770 | 0.0 | 884 |
| MS.gene004757.t1 | AT3G04580 | 58.043 | 746 | 294 | 12 | 23 | 754 | 21 | 761 | 0.0 | 830 |
| MS.gene004757.t1 | AT3G04580 | 58.043 | 746 | 294 | 12 | 23 | 754 | 21 | 761 | 0.0 | 830 |
| MS.gene004757.t1 | AT3G23150 | 61.937 | 599 | 202 | 10 | 1 | 582 | 1 | 590 | 0.0 | 692 |
| MS.gene004757.t1 | AT1G04310 | 53.859 | 622 | 255 | 10 | 9 | 612 | 16 | 623 | 0.0 | 595 |
| MS.gene004757.t1 | AT1G04310 | 53.859 | 622 | 255 | 10 | 9 | 612 | 16 | 623 | 0.0 | 595 |
| MS.gene004757.t1 | AT1G66340 | 39.685 | 761 | 400 | 18 | 29 | 757 | 4 | 737 | 1.24e-170 | 509 |
| MS.gene004757.t1 | AT2G40940 | 40.981 | 571 | 321 | 10 | 29 | 589 | 4 | 568 | 4.40e-125 | 387 |
| MS.gene004757.t1 | AT5G35750 | 24.524 | 473 | 291 | 15 | 332 | 758 | 565 | 1017 | 6.58e-19 | 92.4 |
| MS.gene004757.t1 | AT5G35750 | 30.263 | 152 | 83 | 3 | 624 | 754 | 1024 | 1173 | 6.71e-13 | 73.2 |
| MS.gene004757.t1 | AT1G27320 | 21.875 | 480 | 307 | 10 | 325 | 757 | 410 | 868 | 1.44e-16 | 85.1 |
| MS.gene004757.t1 | AT1G27320 | 26.966 | 178 | 99 | 5 | 603 | 754 | 856 | 1028 | 5.71e-12 | 70.1 |
| MS.gene004757.t1 | AT2G01830 | 23.978 | 367 | 224 | 8 | 344 | 661 | 440 | 800 | 1.95e-12 | 71.6 |
| MS.gene004757.t1 | AT2G01830 | 29.851 | 134 | 81 | 3 | 630 | 751 | 929 | 1061 | 3.62e-11 | 67.4 |
| MS.gene004757.t1 | AT2G01830 | 23.577 | 369 | 223 | 9 | 344 | 661 | 428 | 788 | 2.14e-12 | 71.6 |
| MS.gene004757.t1 | AT2G01830 | 29.851 | 134 | 81 | 3 | 630 | 751 | 917 | 1049 | 3.43e-11 | 67.4 |
| MS.gene004757.t1 | AT2G01830 | 23.577 | 369 | 223 | 9 | 344 | 661 | 428 | 788 | 2.14e-12 | 71.6 |
| MS.gene004757.t1 | AT2G01830 | 29.851 | 134 | 81 | 3 | 630 | 751 | 917 | 1049 | 3.43e-11 | 67.4 |
| MS.gene004757.t1 | AT2G01830 | 23.577 | 369 | 223 | 9 | 344 | 661 | 428 | 788 | 2.14e-12 | 71.6 |
| MS.gene004757.t1 | AT2G01830 | 29.851 | 134 | 81 | 3 | 630 | 751 | 917 | 1049 | 3.43e-11 | 67.4 |
| MS.gene004757.t1 | AT2G01830 | 23.577 | 369 | 223 | 9 | 344 | 661 | 428 | 788 | 2.14e-12 | 71.6 |
| MS.gene004757.t1 | AT2G01830 | 29.851 | 134 | 81 | 3 | 630 | 751 | 917 | 1049 | 3.43e-11 | 67.4 |
| MS.gene004757.t1 | AT2G17820 | 30.935 | 139 | 95 | 1 | 355 | 492 | 488 | 626 | 2.50e-12 | 71.2 |
| MS.gene004757.t1 | AT2G01830 | 23.577 | 369 | 223 | 9 | 344 | 661 | 451 | 811 | 2.95e-12 | 70.9 |
| MS.gene004757.t1 | AT2G01830 | 29.851 | 134 | 81 | 3 | 630 | 751 | 940 | 1072 | 3.28e-11 | 67.8 |
Find 174 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGGCCTATGCACTCGATTT+TGG | 0.157778 | 1.4:+60370154 | MS.gene004757:CDS |
| TTTCTGAATGGTTGGACTTA+TGG | 0.204071 | 1.4:+60369303 | MS.gene004757:CDS |
| GTGGACTATTGAGAGTATTT+TGG | 0.244417 | 1.4:+60369131 | MS.gene004757:CDS |
| CCTTTGGAGATAAGGTCTTT+TGG | 0.244781 | 1.4:+60370317 | MS.gene004757:CDS |
| CAAATGCATGTGTGTTTATA+AGG | 0.254306 | 1.4:+60370376 | MS.gene004757:CDS |
| TTCCATTCAAGTCATTCTTT+TGG | 0.259941 | 1.4:+60371602 | MS.gene004757:CDS |
| GGAAGTTTAAAAGCGGAAAT+AGG | 0.304993 | 1.4:+60371673 | MS.gene004757:CDS |
| GCAGTCAAGGCAACAATTAT+AGG | 0.308408 | 1.4:-60371696 | None:intergenic |
| GTCTTTACCAAACCATGTTA+TGG | 0.315997 | 1.4:+60370427 | MS.gene004757:CDS |
| GCGCTTGCTGTTTCCAGTCT+TGG | 0.319928 | 1.4:+60369783 | MS.gene004757:CDS |
| CAGACCTCTCAACATTGAAT+TGG | 0.323833 | 1.4:-60371448 | None:intergenic |
| AGCTCAGTGTCCTCAGGTCC+CGG | 0.332201 | 1.4:+60370671 | MS.gene004757:CDS |
| AATTAAGGTGGTTGCTGATC+AGG | 0.332673 | 1.4:+60369971 | MS.gene004757:CDS |
| TTCTTCTTCGGTTTCAATTA+CGG | 0.333952 | 1.4:+60371370 | MS.gene004757:CDS |
| TGTATGCAGATTGGTGTTAA+TGG | 0.343123 | 1.4:+60371747 | MS.gene004757:CDS |
| GTGGAGCTTTCGAAAACATT+AGG | 0.351077 | 1.4:+60369597 | MS.gene004757:CDS |
| CATATTGGTCTTGATTCTTC+CGG | 0.355811 | 1.4:+60369908 | MS.gene004757:CDS |
| GTAAATATTAGATTTGAGAT+AGG | 0.360085 | 1.4:+60370620 | MS.gene004757:CDS |
| TCAGGCTTGTTATGCCATAT+TGG | 0.362096 | 1.4:+60369893 | MS.gene004757:CDS |
| TTTGAATGCCTTACTGTCAT+TGG | 0.369155 | 1.4:+60371567 | MS.gene004757:CDS |
| CTCCAAATGCCTGATATAGA+TGG | 0.374320 | 1.4:+60371627 | MS.gene004757:CDS |
| CTTATAAACACACATGCATT+TGG | 0.375755 | 1.4:-60370375 | None:intergenic |
| TCAGGAGCTGGAGATAATTA+AGG | 0.381209 | 1.4:+60369956 | MS.gene004757:CDS |
| TCTTTACCAAACCATGTTAT+GGG | 0.386190 | 1.4:+60370428 | MS.gene004757:CDS |
| ATCCATCTATATCAGGCATT+TGG | 0.388907 | 1.4:-60371629 | None:intergenic |
| GGATGATGGAAGATTTCCTT+TGG | 0.389319 | 1.4:+60370301 | MS.gene004757:CDS |
| TGCTTCTCAAAGTGAAGGTC+AGG | 0.396463 | 1.4:+60369427 | MS.gene004757:CDS |
| ACAACATCTGGATCAGTAAT+CGG | 0.399774 | 1.4:-60369714 | None:intergenic |
| TACTATTCTGTATACTACTT+TGG | 0.402484 | 1.4:+60369575 | MS.gene004757:CDS |
| TGAGGAATACCGTGAGTATA+TGG | 0.405398 | 1.4:-60371336 | None:intergenic |
| GCTCGAACGTCCCTTTCAAA+TGG | 0.406052 | 1.4:+60369232 | MS.gene004757:CDS |
| AAAGCATGACACTTCTTCTT+CGG | 0.410525 | 1.4:+60371358 | MS.gene004757:CDS |
| GGATTGTAACCATGGGGAAG+GGG | 0.412828 | 1.4:+60370502 | MS.gene004757:CDS |
| ACTTCGAATCCATCTATATC+AGG | 0.414647 | 1.4:-60371636 | None:intergenic |
| GATCCTAGTATTTCGAGTTT+CGG | 0.416197 | 1.4:+60370526 | MS.gene004757:CDS |
| GCTCAGTGTCCTCAGGTCCC+GGG | 0.416308 | 1.4:+60370672 | MS.gene004757:CDS |
| TTCCGTGACTTCCGCTTCTA+CGG | 0.417846 | 1.4:+60371542 | MS.gene004757:CDS |
| TCAACTTATGAGAGAGAAGT+TGG | 0.419273 | 1.4:+60370034 | MS.gene004757:CDS |
| CTTTAAGATTCTCACTGCCT+TGG | 0.419423 | 1.4:+60369362 | MS.gene004757:CDS |
| AGTCAAGGGAGGAATGAAAA+AGG | 0.420629 | 1.4:+60370560 | MS.gene004757:CDS |
| GAAGATTTCCTTTGGAGATA+AGG | 0.424573 | 1.4:+60370309 | MS.gene004757:CDS |
| GATTGTAACCATGGGGAAGG+GGG | 0.427873 | 1.4:+60370503 | MS.gene004757:CDS |
| TCCGTGACTTCCGCTTCTAC+GGG | 0.428889 | 1.4:+60371543 | MS.gene004757:CDS |
| GAATGCTATGATGGCAAGCC+AGG | 0.432214 | 1.4:+60370091 | MS.gene004757:CDS |
| CATGTGTGTTTATAAGGGCT+TGG | 0.432309 | 1.4:+60370382 | MS.gene004757:CDS |
| TCGAAGTCGCCGCAAGGATT+CGG | 0.432385 | 1.4:+60371652 | MS.gene004757:CDS |
| ACCTAGATCTTGGAGCAATC+AGG | 0.441634 | 1.4:+60369938 | MS.gene004757:CDS |
| CTGCCGAAACTCGAAATACT+AGG | 0.444425 | 1.4:-60370529 | None:intergenic |
| GCTCCAAGATCTAGGTTCTT+CGG | 0.445823 | 1.4:-60369931 | None:intergenic |
| TTCTTCTGCACTTGCAGTCA+AGG | 0.446455 | 1.4:-60371709 | None:intergenic |
| ACTAGATGAGCTTGGTCTCC+AGG | 0.446804 | 1.4:-60370591 | None:intergenic |
| AGTTGATGCAAGGAAACTTA+TGG | 0.447288 | 1.4:+60371307 | MS.gene004757:intron |
| ATGTGTGTTTATAAGGGCTT+GGG | 0.448667 | 1.4:+60370383 | MS.gene004757:CDS |
| TCATCACCCATAACATGGTT+TGG | 0.448703 | 1.4:-60370434 | None:intergenic |
| TCCTGATTGCTCCAAGATCT+AGG | 0.449928 | 1.4:-60369939 | None:intergenic |
| CGGAAGAATCAAGACCAATA+TGG | 0.450177 | 1.4:-60369907 | None:intergenic |
| GGCATTCGAATGGCAGCAAC+CGG | 0.452555 | 1.4:-60369825 | None:intergenic |
| GCAATTCCTTGCATCAAAAC+CGG | 0.454415 | 1.4:-60371783 | None:intergenic |
| CGGCCGAAGAACCTAGATCT+TGG | 0.454895 | 1.4:+60369928 | MS.gene004757:CDS |
| CTCGAACGTCCCTTTCAAAT+GGG | 0.457846 | 1.4:+60369233 | MS.gene004757:CDS |
| GCGCAATCGAGCTTTGCAAC+TGG | 0.458884 | 1.4:+60370061 | MS.gene004757:CDS |
| AACAGTAGTGATTCTGAAGT+TGG | 0.461479 | 1.4:+60370647 | MS.gene004757:CDS |
| TAATGGAGTAATCCGAAAAC+CGG | 0.467924 | 1.4:+60371764 | MS.gene004757:CDS |
| GCATATGGTTGGGAATCTAC+TGG | 0.475238 | 1.4:+60370481 | MS.gene004757:CDS |
| ACGAAATAAAGCAACTCAAG+AGG | 0.478092 | 1.4:-60369204 | None:intergenic |
| AGAAGAAGTGTCATGCTTTG+AGG | 0.480685 | 1.4:-60371354 | None:intergenic |
| GAATGCTTACTCAAGAGATT+CGG | 0.482071 | 1.4:+60369535 | MS.gene004757:CDS |
| AAGTCATGAGTGATGGTATG+AGG | 0.483265 | 1.4:+60370132 | MS.gene004757:CDS |
| TGGGATCTTGGACGGGAGGT+TGG | 0.484581 | 1.4:+60369474 | MS.gene004757:CDS |
| GTTGGCAGCTCAGTGTCCTC+AGG | 0.485068 | 1.4:+60370665 | MS.gene004757:CDS |
| TCTGAAATGAGTTTCTTGCC+TGG | 0.486268 | 1.4:-60370109 | None:intergenic |
| ATCCAAAAGAATGACTTGAA+TGG | 0.489294 | 1.4:-60371604 | None:intergenic |
| AAATGCATGTGTGTTTATAA+GGG | 0.490040 | 1.4:+60370377 | MS.gene004757:CDS |
| TGGTCTTATTATGAAGCAAA+AGG | 0.490084 | 1.4:+60369494 | MS.gene004757:CDS |
| TAAATATTAGATTTGAGATA+GGG | 0.495686 | 1.4:+60370621 | MS.gene004757:CDS |
| ATATACCAGTGATAGATATG+AGG | 0.497274 | 1.4:+60370703 | MS.gene004757:CDS |
| ATCTTGGAGCAATCAGGAGC+TGG | 0.497970 | 1.4:+60369944 | MS.gene004757:CDS |
| CTCAGTGTCCTCAGGTCCCG+GGG | 0.500200 | 1.4:+60370673 | MS.gene004757:CDS |
| TCATCATCACAATTACATCT+AGG | 0.500845 | 1.4:-60369099 | None:intergenic |
| GACAGCTCTGCAAAGGATGA+TGG | 0.501785 | 1.4:+60370287 | MS.gene004757:CDS |
| TCCCGTAGAAGCGGAAGTCA+CGG | 0.504322 | 1.4:-60371544 | None:intergenic |
| TTTCGAGTTTCGGCAGACGC+TGG | 0.505966 | 1.4:+60370536 | MS.gene004757:CDS |
| TGGATTGTAACCATGGGGAA+GGG | 0.508641 | 1.4:+60370501 | MS.gene004757:CDS |
| TATTCTGTATACTACTTTGG+TGG | 0.509087 | 1.4:+60369578 | MS.gene004757:CDS |
| GAGAGGTCTGCAAGTTCTGT+TGG | 0.509235 | 1.4:+60371461 | MS.gene004757:CDS |
| ATTGTAACCATGGGGAAGGG+GGG | 0.512664 | 1.4:+60370504 | MS.gene004757:CDS |
| TGGTGATTTCTTGATTGCTG+TGG | 0.516847 | 1.4:+60369167 | MS.gene004757:CDS |
| AAGTGCAGAAGAAGATTTGT+GGG | 0.517262 | 1.4:+60371719 | MS.gene004757:CDS |
| CTTACTGTCATTGGACCTGT+TGG | 0.517705 | 1.4:+60371576 | MS.gene004757:CDS |
| CAACAGGTCCAATGACAGTA+AGG | 0.522523 | 1.4:-60371575 | None:intergenic |
| CTCAAGAGGGATTGAGAAGT+AGG | 0.523719 | 1.4:-60369190 | None:intergenic |
| TGTTTCTAGTGACGCAGGAC+CGG | 0.528437 | 1.4:+60369806 | MS.gene004757:CDS |
| GTTGCGTTCTGAAGATTCCC+CGG | 0.528905 | 1.4:-60371421 | None:intergenic |
| AAATTACAAACACGTAACAT+TGG | 0.530189 | 1.4:-60369846 | None:intergenic |
| GGCGAGAAGGAATGCTATGA+TGG | 0.531744 | 1.4:+60370082 | MS.gene004757:CDS |
| TCGGCAGACGCTGGAAGTCA+AGG | 0.534100 | 1.4:+60370545 | MS.gene004757:CDS |
| CATCATTTATCAAGTTTGAG+AGG | 0.538740 | 1.4:-60370259 | None:intergenic |
| CTCAAAAGAATTCTGATGCA+AGG | 0.538760 | 1.4:+60371813 | MS.gene004757:CDS |
| ATCTACTGGATTGTAACCAT+GGG | 0.542949 | 1.4:+60370495 | MS.gene004757:CDS |
| TTGCGTTCTGAAGATTCCCC+GGG | 0.544742 | 1.4:-60371420 | None:intergenic |
| GAACAAGGACCCATTTGAAA+GGG | 0.546654 | 1.4:-60369242 | None:intergenic |
| TCTGCCCTCATATCTATCAC+TGG | 0.547398 | 1.4:-60370708 | None:intergenic |
| ACCTTCACTTTGAGAAGCAA+CGG | 0.548121 | 1.4:-60369423 | None:intergenic |
| TGAACAAGGACCCATTTGAA+AGG | 0.548158 | 1.4:-60369243 | None:intergenic |
| GCAATAGCCATCTCTGAACC+CGG | 0.551030 | 1.4:+60371402 | MS.gene004757:CDS |
| GGCAGTGAGAATCTTAAAGA+TGG | 0.551039 | 1.4:-60369358 | None:intergenic |
| ACTTGAATGGAAGATCCAAC+AGG | 0.554016 | 1.4:-60371591 | None:intergenic |
| CAAGTGCAGAAGAAGATTTG+TGG | 0.554779 | 1.4:+60371718 | MS.gene004757:CDS |
| TCCGTTGCTTCTCAAAGTGA+AGG | 0.554967 | 1.4:+60369422 | MS.gene004757:CDS |
| AAACTTGATAAATGATGCCA+TGG | 0.555930 | 1.4:+60370265 | MS.gene004757:CDS |
| TAACAAGCCTGAGTTAGCTC+AGG | 0.557598 | 1.4:-60369882 | None:intergenic |
| ACATCACCACTAGATGAGCT+TGG | 0.559230 | 1.4:-60370599 | None:intergenic |
| CGAAATAAAGCAACTCAAGA+GGG | 0.560282 | 1.4:-60369203 | None:intergenic |
| TTCAGAGATGGCTATTGCAA+TGG | 0.562065 | 1.4:-60371397 | None:intergenic |
| TGTTAATTGCAGTTGATGCA+AGG | 0.562733 | 1.4:+60371297 | MS.gene004757:intron |
| TATTTGCAAGAGGATAGTCC+AGG | 0.567491 | 1.4:+60370742 | MS.gene004757:CDS |
| AATCTACTGGATTGTAACCA+TGG | 0.568873 | 1.4:+60370494 | MS.gene004757:CDS |
| TGGGAAAGATGTATGCAGAT+TGG | 0.570128 | 1.4:+60371738 | MS.gene004757:CDS |
| ATCCTTTGCAGAGCTGTCCA+TGG | 0.572923 | 1.4:-60370282 | None:intergenic |
| GTGATGATGAGAACAGTTTG+TGG | 0.575845 | 1.4:+60369112 | MS.gene004757:CDS |
| CTGGATTGTAACCATGGGGA+AGG | 0.575928 | 1.4:+60370500 | MS.gene004757:CDS |
| AAAGACATGGGATCTTGGAC+GGG | 0.576526 | 1.4:+60369467 | MS.gene004757:CDS |
| AAAAGACATGGGATCTTGGA+CGG | 0.578361 | 1.4:+60369466 | MS.gene004757:CDS |
| GAATGAACAGAAGCTTATTG+TGG | 0.580973 | 1.4:+60370211 | MS.gene004757:CDS |
| CAATAGCCATCTCTGAACCC+GGG | 0.581848 | 1.4:+60371403 | MS.gene004757:CDS |
| TCCTCTCATCACCCATAACA+TGG | 0.582290 | 1.4:-60370439 | None:intergenic |
| GTCACTAGAAACACCAAGAC+TGG | 0.584089 | 1.4:-60369796 | None:intergenic |
| CAAGATCTAGGTTCTTCGGC+CGG | 0.584183 | 1.4:-60369927 | None:intergenic |
| CAGAATAGTATGTCTATCGA+GGG | 0.585211 | 1.4:-60369562 | None:intergenic |
| GAGATGGCTATTGCAATGGA+AGG | 0.587280 | 1.4:-60371393 | None:intergenic |
| CGGCAGACGCTGGAAGTCAA+GGG | 0.589768 | 1.4:+60370546 | MS.gene004757:CDS |
| TGAGCTTTAGTATTTGCAAG+AGG | 0.590203 | 1.4:+60370732 | MS.gene004757:CDS |
| AGGAACACCTGAGCTAACTC+AGG | 0.590712 | 1.4:+60369875 | MS.gene004757:CDS |
| TGCAGCATGCGATAGAGCCA+CGG | 0.591811 | 1.4:-60369997 | None:intergenic |
| CCAAAAGACCTTATCTCCAA+AGG | 0.594431 | 1.4:-60370317 | None:intergenic |
| ACCATGTTATGGGTGATGAG+AGG | 0.595070 | 1.4:+60370438 | MS.gene004757:CDS |
| ATGTTATGGGTGATGAGAGG+AGG | 0.595173 | 1.4:+60370441 | MS.gene004757:CDS |
| GAGCTTTGCAACTGGCGAGA+AGG | 0.595611 | 1.4:+60370069 | MS.gene004757:CDS |
| AGATTCCCCGGGTTCAGAGA+TGG | 0.597080 | 1.4:-60371409 | None:intergenic |
| ATGGATTCGAAGTCGCCGCA+AGG | 0.597554 | 1.4:+60371646 | MS.gene004757:CDS |
| TCACTCATGAATTGAACGCA+AGG | 0.600049 | 1.4:+60369673 | MS.gene004757:CDS |
| GCATTCAAATCCCGTAGAAG+CGG | 0.602716 | 1.4:-60371553 | None:intergenic |
| TATTCCAATTCAATGTTGAG+AGG | 0.606759 | 1.4:+60371444 | MS.gene004757:CDS |
| TGTTATGGGTGATGAGAGGA+GGG | 0.608371 | 1.4:+60370442 | MS.gene004757:CDS |
| ACTGGTATATGTCCTACCCC+CGG | 0.609146 | 1.4:-60370690 | None:intergenic |
| AAACACACATGCATTTGGCA+AGG | 0.611821 | 1.4:-60370370 | None:intergenic |
| GACATGGGATCTTGGACGGG+AGG | 0.611959 | 1.4:+60369470 | MS.gene004757:CDS |
| TTTCAGAAAGTCATGAGTGA+TGG | 0.612216 | 1.4:+60370125 | MS.gene004757:CDS |
| AGATACACACAAGAGGATAG+AGG | 0.612399 | 1.4:-60369055 | None:intergenic |
| TTTAAACTTCCGAATCCTTG+CGG | 0.614777 | 1.4:-60371661 | None:intergenic |
| ACAGAATAGTATGTCTATCG+AGG | 0.617871 | 1.4:-60369563 | None:intergenic |
| TATACCAGTGATAGATATGA+GGG | 0.618668 | 1.4:+60370704 | MS.gene004757:CDS |
| CTTGGTGTTTCTAGTGACGC+AGG | 0.622071 | 1.4:+60369801 | MS.gene004757:CDS |
| AATCCCAAAATCGAGTGCAT+AGG | 0.622628 | 1.4:-60370158 | None:intergenic |
| ACGTAACATTGGCATTCGAA+TGG | 0.630068 | 1.4:-60369835 | None:intergenic |
| GATGCAAGGAAACTTATGGT+TGG | 0.630539 | 1.4:+60371311 | MS.gene004757:CDS |
| CGCAGTTGCACAAGACACCA+AGG | 0.633662 | 1.4:-60369379 | None:intergenic |
| TGCCATGGACAGCTCTGCAA+AGG | 0.638516 | 1.4:+60370280 | MS.gene004757:CDS |
| TCTTATTATGAAGCAAAAGG+AGG | 0.642117 | 1.4:+60369497 | MS.gene004757:CDS |
| GGTTGCTGATCAGGTTGCCG+TGG | 0.646373 | 1.4:+60369980 | MS.gene004757:CDS |
| TAAAAGCAATGAACTGAACA+AGG | 0.647813 | 1.4:-60369257 | None:intergenic |
| TTGTTGCAGATACACACAAG+AGG | 0.652660 | 1.4:-60369062 | None:intergenic |
| GTTTGCAAAATTGTGCTGTG+TGG | 0.653112 | 1.4:+60369619 | MS.gene004757:CDS |
| GCTTCTCAAAGTGAAGGTCA+GGG | 0.656793 | 1.4:+60369428 | MS.gene004757:CDS |
| TGGAGACCAAGCTCATCTAG+TGG | 0.665111 | 1.4:+60370593 | MS.gene004757:CDS |
| AGGATTCGGAAGTTTAAAAG+CGG | 0.670736 | 1.4:+60371666 | MS.gene004757:CDS |
| GGAGCTGGAGATAATTAAGG+TGG | 0.673703 | 1.4:+60369959 | MS.gene004757:CDS |
| ACCATAAGCTGAAAAGTGTG+AGG | 0.673832 | 1.4:-60369327 | None:intergenic |
| AATAGCCATCTCTGAACCCG+GGG | 0.674767 | 1.4:+60371404 | MS.gene004757:CDS |
| TCATGAGTGATGGTATGAGG+AGG | 0.683443 | 1.4:+60370135 | MS.gene004757:CDS |
| TGGTTGGTACCATATACTCA+CGG | 0.687045 | 1.4:+60371327 | MS.gene004757:CDS |
| CAGACGCTGGAAGTCAAGGG+AGG | 0.709276 | 1.4:+60370549 | MS.gene004757:CDS |
| TCTACTGGATTGTAACCATG+GGG | 0.741326 | 1.4:+60370496 | MS.gene004757:CDS |
| TCAGTGTCCTCAGGTCCCGG+GGG | 0.744374 | 1.4:+60370674 | MS.gene004757:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAATATTAGATTTGAGATA+GGG | + | chr1.4:60370621-60370640 | MS.gene004757:CDS | 15.0% |
| !! | AAAAATTAACTCAGAATACA+AGG | - | chr1.4:60371239-60371258 | None:intergenic | 20.0% |
| !! | GAAATTAAGTAATCAAATCA+AGG | - | chr1.4:60371268-60371287 | None:intergenic | 20.0% |
| !!! | AGTTACATTGTTTGTTATAT+GGG | + | chr1.4:60370767-60370786 | MS.gene004757:intron | 20.0% |
| !!! | GTAAATATTAGATTTGAGAT+AGG | + | chr1.4:60370620-60370639 | MS.gene004757:CDS | 20.0% |
| !!! | TGTAGTTTTTAATTTTGCTT+AGG | + | chr1.4:60371177-60371196 | MS.gene004757:intron | 20.0% |
| !!! | TTACGTGTTTGTAATTTTAA+AGG | + | chr1.4:60369852-60369871 | MS.gene004757:CDS | 20.0% |
| ! | AAATGCATGTGTGTTTATAA+GGG | + | chr1.4:60370377-60370396 | MS.gene004757:CDS | 25.0% |
| ! | AAATTACAAACACGTAACAT+TGG | - | chr1.4:60369849-60369868 | None:intergenic | 25.0% |
| ! | CCAGATGTTGTAAAAATTAA+GGG | + | chr1.4:60369726-60369745 | MS.gene004757:CDS | 25.0% |
| ! | TACTATTCTGTATACTACTT+TGG | + | chr1.4:60369575-60369594 | MS.gene004757:CDS | 25.0% |
| ! | TCCAGATGTTGTAAAAATTA+AGG | + | chr1.4:60369725-60369744 | MS.gene004757:CDS | 25.0% |
| !!! | ATTGCTTTTATAGTACTATG+TGG | + | chr1.4:60369270-60369289 | MS.gene004757:CDS | 25.0% |
| !!! | GAGTTACATTGTTTGTTATA+TGG | + | chr1.4:60370766-60370785 | MS.gene004757:intron | 25.0% |
| AAACTTGATAAATGATGCCA+TGG | + | chr1.4:60370265-60370284 | MS.gene004757:CDS | 30.0% | |
| AACATATTCCACAGTATTCA+AGG | - | chr1.4:60370976-60370995 | None:intergenic | 30.0% | |
| ATATACCAGTGATAGATATG+AGG | + | chr1.4:60370703-60370722 | MS.gene004757:CDS | 30.0% | |
| ATCCAAAAGAATGACTTGAA+TGG | - | chr1.4:60371607-60371626 | None:intergenic | 30.0% | |
| ATGTCACACAAACAATGAAA+AGG | - | chr1.4:60370895-60370914 | None:intergenic | 30.0% | |
| CAAATGCATGTGTGTTTATA+AGG | + | chr1.4:60370376-60370395 | MS.gene004757:CDS | 30.0% | |
| CATCATTTATCAAGTTTGAG+AGG | - | chr1.4:60370262-60370281 | None:intergenic | 30.0% | |
| CTTATAAACACACATGCATT+TGG | - | chr1.4:60370378-60370397 | None:intergenic | 30.0% | |
| GTAAAAATTAAGGGAAGCAA+TGG | + | chr1.4:60369735-60369754 | MS.gene004757:CDS | 30.0% | |
| GTGACATAAATAGCTGAATT+TGG | + | chr1.4:60370908-60370927 | MS.gene004757:intron | 30.0% | |
| TAAAAGCAATGAACTGAACA+AGG | - | chr1.4:60369260-60369279 | None:intergenic | 30.0% | |
| TAATGCGTGTTCGATATATT+TGG | + | chr1.4:60371133-60371152 | MS.gene004757:intron | 30.0% | |
| TATACCAGTGATAGATATGA+GGG | + | chr1.4:60370704-60370723 | MS.gene004757:CDS | 30.0% | |
| TATTCCAATTCAATGTTGAG+AGG | + | chr1.4:60371444-60371463 | MS.gene004757:CDS | 30.0% | |
| TATTCTGTATACTACTTTGG+TGG | + | chr1.4:60369578-60369597 | MS.gene004757:CDS | 30.0% | |
| TCATCATCACAATTACATCT+AGG | - | chr1.4:60369102-60369121 | None:intergenic | 30.0% | |
| TCTTATTATGAAGCAAAAGG+AGG | + | chr1.4:60369497-60369516 | MS.gene004757:CDS | 30.0% | |
| TCTTTACCAAACCATGTTAT+GGG | + | chr1.4:60370428-60370447 | MS.gene004757:CDS | 30.0% | |
| TTCTTCTTCGGTTTCAATTA+CGG | + | chr1.4:60371370-60371389 | MS.gene004757:CDS | 30.0% | |
| ! | ATCACTGTCTTTTCTTCATT+TGG | - | chr1.4:60369648-60369667 | None:intergenic | 30.0% |
| ! | CCCTTAATTTTTACAACATC+TGG | - | chr1.4:60369729-60369748 | None:intergenic | 30.0% |
| ! | TTCCATTCAAGTCATTCTTT+TGG | + | chr1.4:60371602-60371621 | MS.gene004757:CDS | 30.0% |
| !! | CGTGTTTGTAATTTTAAAGG+AGG | + | chr1.4:60369855-60369874 | MS.gene004757:CDS | 30.0% |
| !! | TGGTCTTATTATGAAGCAAA+AGG | + | chr1.4:60369494-60369513 | MS.gene004757:CDS | 30.0% |
| !! | TTGTTTGTTATATGGGTTCA+TGG | + | chr1.4:60370774-60370793 | MS.gene004757:intron | 30.0% |
| !!! | TTTTCAGGTGATTTTGCATA+TGG | + | chr1.4:60370466-60370485 | MS.gene004757:CDS | 30.0% |
| AAAGCATGACACTTCTTCTT+CGG | + | chr1.4:60371358-60371377 | MS.gene004757:CDS | 35.0% | |
| AACAAACAATGTAACTCACC+TGG | - | chr1.4:60370763-60370782 | None:intergenic | 35.0% | |
| AAGAAAAAGACATGGGATCT+TGG | + | chr1.4:60369462-60369481 | MS.gene004757:CDS | 35.0% | |
| AAGTGCAGAAGAAGATTTGT+GGG | + | chr1.4:60371719-60371738 | MS.gene004757:CDS | 35.0% | |
| AATCTACTGGATTGTAACCA+TGG | + | chr1.4:60370494-60370513 | MS.gene004757:CDS | 35.0% | |
| ACAACATCTGGATCAGTAAT+CGG | - | chr1.4:60369717-60369736 | None:intergenic | 35.0% | |
| ACAGAATAGTATGTCTATCG+AGG | - | chr1.4:60369566-60369585 | None:intergenic | 35.0% | |
| ACATCTTGCGAAACTGAATT+TGG | + | chr1.4:60370852-60370871 | MS.gene004757:intron | 35.0% | |
| ACGAAATAAAGCAACTCAAG+AGG | - | chr1.4:60369207-60369226 | None:intergenic | 35.0% | |
| ACTTCGAATCCATCTATATC+AGG | - | chr1.4:60371639-60371658 | None:intergenic | 35.0% | |
| AGGATTCGGAAGTTTAAAAG+CGG | + | chr1.4:60371666-60371685 | MS.gene004757:CDS | 35.0% | |
| AGGATTCTAACTAACATCAC+AGG | - | chr1.4:60371044-60371063 | None:intergenic | 35.0% | |
| ATCCATCTATATCAGGCATT+TGG | - | chr1.4:60371632-60371651 | None:intergenic | 35.0% | |
| ATCTACTGGATTGTAACCAT+GGG | + | chr1.4:60370495-60370514 | MS.gene004757:CDS | 35.0% | |
| ATGTGTGTTTATAAGGGCTT+GGG | + | chr1.4:60370383-60370402 | MS.gene004757:CDS | 35.0% | |
| CAAAAACTGCTTCAGAAACT+AGG | + | chr1.4:60371516-60371535 | MS.gene004757:CDS | 35.0% | |
| CAGAATAGTATGTCTATCGA+GGG | - | chr1.4:60369565-60369584 | None:intergenic | 35.0% | |
| CATGCTCAAGAAAAAGACAT+GGG | + | chr1.4:60369455-60369474 | MS.gene004757:CDS | 35.0% | |
| CGAAATAAAGCAACTCAAGA+GGG | - | chr1.4:60369206-60369225 | None:intergenic | 35.0% | |
| CTCAAAAGAATTCTGATGCA+AGG | + | chr1.4:60371813-60371832 | MS.gene004757:CDS | 35.0% | |
| GAATGAACAGAAGCTTATTG+TGG | + | chr1.4:60370211-60370230 | MS.gene004757:CDS | 35.0% | |
| GAATGCTTACTCAAGAGATT+CGG | + | chr1.4:60369535-60369554 | MS.gene004757:CDS | 35.0% | |
| GGAAGTTTAAAAGCGGAAAT+AGG | + | chr1.4:60371673-60371692 | MS.gene004757:CDS | 35.0% | |
| GTCTTTACCAAACCATGTTA+TGG | + | chr1.4:60370427-60370446 | MS.gene004757:CDS | 35.0% | |
| TAATGGAGTAATCCGAAAAC+CGG | + | chr1.4:60371764-60371783 | MS.gene004757:CDS | 35.0% | |
| TCAACTTATGAGAGAGAAGT+TGG | + | chr1.4:60370034-60370053 | MS.gene004757:CDS | 35.0% | |
| TCATGCTCAAGAAAAAGACA+TGG | + | chr1.4:60369454-60369473 | MS.gene004757:CDS | 35.0% | |
| TTTAAACTTCCGAATCCTTG+CGG | - | chr1.4:60371664-60371683 | None:intergenic | 35.0% | |
| TTTCAGAAAGTCATGAGTGA+TGG | + | chr1.4:60370125-60370144 | MS.gene004757:CDS | 35.0% | |
| TTTCTGAATGGTTGGACTTA+TGG | + | chr1.4:60369303-60369322 | MS.gene004757:CDS | 35.0% | |
| TTTGAATGCCTTACTGTCAT+TGG | + | chr1.4:60371567-60371586 | MS.gene004757:CDS | 35.0% | |
| ! | AGGTGATTTTGCATATGGTT+GGG | + | chr1.4:60370471-60370490 | MS.gene004757:CDS | 35.0% |
| ! | AGTTGATGCAAGGAAACTTA+TGG | + | chr1.4:60371307-60371326 | MS.gene004757:intron | 35.0% |
| ! | ATCTGGAATCGGAATGTTAT+TGG | + | chr1.4:60371085-60371104 | MS.gene004757:intron | 35.0% |
| ! | CATAAGAGCAAATCTGGAAT+CGG | + | chr1.4:60371074-60371093 | MS.gene004757:intron | 35.0% |
| ! | GAAGATTTCCTTTGGAGATA+AGG | + | chr1.4:60370309-60370328 | MS.gene004757:CDS | 35.0% |
| ! | GGATTGACACATTTTCTGAA+TGG | + | chr1.4:60369291-60369310 | MS.gene004757:CDS | 35.0% |
| ! | TCCAGATTTGCTCTTATGAT+GGG | - | chr1.4:60371072-60371091 | None:intergenic | 35.0% |
| ! | TGACACATTTTCTGAATGGT+TGG | + | chr1.4:60369295-60369314 | MS.gene004757:CDS | 35.0% |
| ! | TGAGCTTTAGTATTTGCAAG+AGG | + | chr1.4:60370732-60370751 | MS.gene004757:CDS | 35.0% |
| ! | TGCTCTTATGATGGGAAAAT+AGG | - | chr1.4:60371064-60371083 | None:intergenic | 35.0% |
| ! | TGTGTTTTCCTTGAATACTG+TGG | + | chr1.4:60370965-60370984 | MS.gene004757:intron | 35.0% |
| ! | TGTTAATTGCAGTTGATGCA+AGG | + | chr1.4:60371297-60371316 | MS.gene004757:intron | 35.0% |
| ! | TTCCAGATTTGCTCTTATGA+TGG | - | chr1.4:60371073-60371092 | None:intergenic | 35.0% |
| !! | AACAGTAGTGATTCTGAAGT+TGG | + | chr1.4:60370647-60370666 | MS.gene004757:CDS | 35.0% |
| !! | CATATTGGTCTTGATTCTTC+CGG | + | chr1.4:60369908-60369927 | MS.gene004757:CDS | 35.0% |
| !! | CTTTGGAGATAAGGTCTTTT+GGG | + | chr1.4:60370318-60370337 | MS.gene004757:CDS | 35.0% |
| !! | GATCCTAGTATTTCGAGTTT+CGG | + | chr1.4:60370526-60370545 | MS.gene004757:CDS | 35.0% |
| !! | GTTATTGGTGTTGTATCTCT+AGG | + | chr1.4:60371100-60371119 | MS.gene004757:intron | 35.0% |
| !! | TGTATGCAGATTGGTGTTAA+TGG | + | chr1.4:60371747-60371766 | MS.gene004757:CDS | 35.0% |
| !!! | ATTTTGGAGTGTCAAAGAGT+TGG | + | chr1.4:60369147-60369166 | MS.gene004757:CDS | 35.0% |
| !!! | GTGGACTATTGAGAGTATTT+TGG | + | chr1.4:60369131-60369150 | MS.gene004757:CDS | 35.0% |
| AAAAGACATGGGATCTTGGA+CGG | + | chr1.4:60369466-60369485 | MS.gene004757:CDS | 40.0% | |
| AAACACACATGCATTTGGCA+AGG | - | chr1.4:60370373-60370392 | None:intergenic | 40.0% | |
| AAGGGAGGAATGAAAAAGGA+TGG | + | chr1.4:60370564-60370583 | MS.gene004757:CDS | 40.0% | |
| AAGTCATGAGTGATGGTATG+AGG | + | chr1.4:60370132-60370151 | MS.gene004757:CDS | 40.0% | |
| AATCCCAAAATCGAGTGCAT+AGG | - | chr1.4:60370161-60370180 | None:intergenic | 40.0% | |
| AATTAAGGTGGTTGCTGATC+AGG | + | chr1.4:60369971-60369990 | MS.gene004757:CDS | 40.0% | |
| ACGTAACATTGGCATTCGAA+TGG | - | chr1.4:60369838-60369857 | None:intergenic | 40.0% | |
| ACTTGAATGGAAGATCCAAC+AGG | - | chr1.4:60371594-60371613 | None:intergenic | 40.0% | |
| AGATACACACAAGAGGATAG+AGG | - | chr1.4:60369058-60369077 | None:intergenic | 40.0% | |
| AGGGAGGAATGAAAAAGGAT+GGG | + | chr1.4:60370565-60370584 | MS.gene004757:CDS | 40.0% | |
| AGTCAAGGGAGGAATGAAAA+AGG | + | chr1.4:60370560-60370579 | MS.gene004757:CDS | 40.0% | |
| CAAGTGCAGAAGAAGATTTG+TGG | + | chr1.4:60371718-60371737 | MS.gene004757:CDS | 40.0% | |
| CAGACCTCTCAACATTGAAT+TGG | - | chr1.4:60371451-60371470 | None:intergenic | 40.0% | |
| CATGTGTGTTTATAAGGGCT+TGG | + | chr1.4:60370382-60370401 | MS.gene004757:CDS | 40.0% | |
| CCAAAAGACCTTATCTCCAA+AGG | - | chr1.4:60370320-60370339 | None:intergenic | 40.0% | |
| CGGAAGAATCAAGACCAATA+TGG | - | chr1.4:60369910-60369929 | None:intergenic | 40.0% | |
| CTCCAAATGCCTGATATAGA+TGG | + | chr1.4:60371627-60371646 | MS.gene004757:CDS | 40.0% | |
| GAACAAGGACCCATTTGAAA+GGG | - | chr1.4:60369245-60369264 | None:intergenic | 40.0% | |
| GATGCAAGGAAACTTATGGT+TGG | + | chr1.4:60371311-60371330 | MS.gene004757:CDS | 40.0% | |
| GCAATTCCTTGCATCAAAAC+CGG | - | chr1.4:60371786-60371805 | None:intergenic | 40.0% | |
| GCAGTCAAGGCAACAATTAT+AGG | - | chr1.4:60371699-60371718 | None:intergenic | 40.0% | |
| GGCAGTGAGAATCTTAAAGA+TGG | - | chr1.4:60369361-60369380 | None:intergenic | 40.0% | |
| GTGGAGCTTTCGAAAACATT+AGG | + | chr1.4:60369597-60369616 | MS.gene004757:CDS | 40.0% | |
| GTTTGCAAAATTGTGCTGTG+TGG | + | chr1.4:60369619-60369638 | MS.gene004757:CDS | 40.0% | |
| TATTTGCAAGAGGATAGTCC+AGG | + | chr1.4:60370742-60370761 | MS.gene004757:CDS | 40.0% | |
| TCACTCATGAATTGAACGCA+AGG | + | chr1.4:60369673-60369692 | MS.gene004757:CDS | 40.0% | |
| TCAGGAGCTGGAGATAATTA+AGG | + | chr1.4:60369956-60369975 | MS.gene004757:CDS | 40.0% | |
| TCATCACCCATAACATGGTT+TGG | - | chr1.4:60370437-60370456 | None:intergenic | 40.0% | |
| TCCCATCATAAGAGCAAATC+TGG | + | chr1.4:60371068-60371087 | MS.gene004757:intron | 40.0% | |
| TCTACTGGATTGTAACCATG+GGG | + | chr1.4:60370496-60370515 | MS.gene004757:CDS | 40.0% | |
| TGAACAAGGACCCATTTGAA+AGG | - | chr1.4:60369246-60369265 | None:intergenic | 40.0% | |
| TGAGGAATACCGTGAGTATA+TGG | - | chr1.4:60371339-60371358 | None:intergenic | 40.0% | |
| TGGGAAAGATGTATGCAGAT+TGG | + | chr1.4:60371738-60371757 | MS.gene004757:CDS | 40.0% | |
| TGGTGATTTCTTGATTGCTG+TGG | + | chr1.4:60369167-60369186 | MS.gene004757:CDS | 40.0% | |
| TTCAGAGATGGCTATTGCAA+TGG | - | chr1.4:60371400-60371419 | None:intergenic | 40.0% | |
| TTGTTGCAGATACACACAAG+AGG | - | chr1.4:60369065-60369084 | None:intergenic | 40.0% | |
| ! | ACCATAAGCTGAAAAGTGTG+AGG | - | chr1.4:60369330-60369349 | None:intergenic | 40.0% |
| ! | ACCTTCACTTTGAGAAGCAA+CGG | - | chr1.4:60369426-60369445 | None:intergenic | 40.0% |
| ! | CAGGTGATTTTGCATATGGT+TGG | + | chr1.4:60370470-60370489 | MS.gene004757:CDS | 40.0% |
| ! | GTGATGATGAGAACAGTTTG+TGG | + | chr1.4:60369112-60369131 | MS.gene004757:CDS | 40.0% |
| ! | TCACACTTTTCAGCTTATGG+TGG | + | chr1.4:60369329-60369348 | MS.gene004757:CDS | 40.0% |
| ! | TCCTCACACTTTTCAGCTTA+TGG | + | chr1.4:60369326-60369345 | MS.gene004757:CDS | 40.0% |
| ! | TCTGAAATGAGTTTCTTGCC+TGG | - | chr1.4:60370112-60370131 | None:intergenic | 40.0% |
| ! | TGGTTGGTACCATATACTCA+CGG | + | chr1.4:60371327-60371346 | MS.gene004757:CDS | 40.0% |
| ! | TTATAAGGGCTTGGGTTTTG+TGG | + | chr1.4:60370391-60370410 | MS.gene004757:CDS | 40.0% |
| !! | AGAAGAAGTGTCATGCTTTG+AGG | - | chr1.4:60371357-60371376 | None:intergenic | 40.0% |
| !! | CCTTTGGAGATAAGGTCTTT+TGG | + | chr1.4:60370317-60370336 | MS.gene004757:CDS | 40.0% |
| !! | CTTGCATCAAAACCGGTTTT+CGG | - | chr1.4:60371779-60371798 | None:intergenic | 40.0% |
| !! | CTTTAAGATTCTCACTGCCT+TGG | + | chr1.4:60369362-60369381 | MS.gene004757:CDS | 40.0% |
| !! | GGATGATGGAAGATTTCCTT+TGG | + | chr1.4:60370301-60370320 | MS.gene004757:CDS | 40.0% |
| !! | TCAGGCTTGTTATGCCATAT+TGG | + | chr1.4:60369893-60369912 | MS.gene004757:CDS | 40.0% |
| AAAGACATGGGATCTTGGAC+GGG | + | chr1.4:60369467-60369486 | MS.gene004757:CDS | 45.0% | |
| ACATCACCACTAGATGAGCT+TGG | - | chr1.4:60370602-60370621 | None:intergenic | 45.0% | |
| ACCATGTTATGGGTGATGAG+AGG | + | chr1.4:60370438-60370457 | MS.gene004757:CDS | 45.0% | |
| ACCTAGATCTTGGAGCAATC+AGG | + | chr1.4:60369938-60369957 | MS.gene004757:CDS | 45.0% | |
| ATGAAAAAGGATGGGCAACC+TGG | + | chr1.4:60370573-60370592 | MS.gene004757:CDS | 45.0% | |
| ATGTTATGGGTGATGAGAGG+AGG | + | chr1.4:60370441-60370460 | MS.gene004757:CDS | 45.0% | |
| CAACAGGTCCAATGACAGTA+AGG | - | chr1.4:60371578-60371597 | None:intergenic | 45.0% | |
| CTCAAGAGGGATTGAGAAGT+AGG | - | chr1.4:60369193-60369212 | None:intergenic | 45.0% | |
| CTCGAACGTCCCTTTCAAAT+GGG | + | chr1.4:60369233-60369252 | MS.gene004757:CDS | 45.0% | |
| CTGCCGAAACTCGAAATACT+AGG | - | chr1.4:60370532-60370551 | None:intergenic | 45.0% | |
| CTTACTGTCATTGGACCTGT+TGG | + | chr1.4:60371576-60371595 | MS.gene004757:CDS | 45.0% | |
| GAGATGGCTATTGCAATGGA+AGG | - | chr1.4:60371396-60371415 | None:intergenic | 45.0% | |
| GCATATGGTTGGGAATCTAC+TGG | + | chr1.4:60370481-60370500 | MS.gene004757:CDS | 45.0% | |
| GCATTCAAATCCCGTAGAAG+CGG | - | chr1.4:60371556-60371575 | None:intergenic | 45.0% | |
| GCTCCAAGATCTAGGTTCTT+CGG | - | chr1.4:60369934-60369953 | None:intergenic | 45.0% | |
| GCTTCTCAAAGTGAAGGTCA+GGG | + | chr1.4:60369428-60369447 | MS.gene004757:CDS | 45.0% | |
| GGAGCTGGAGATAATTAAGG+TGG | + | chr1.4:60369959-60369978 | MS.gene004757:CDS | 45.0% | |
| GTCACTAGAAACACCAAGAC+TGG | - | chr1.4:60369799-60369818 | None:intergenic | 45.0% | |
| TAACAAGCCTGAGTTAGCTC+AGG | - | chr1.4:60369885-60369904 | None:intergenic | 45.0% | |
| TAACAGTACAACGCGTAGCT+TGG | - | chr1.4:60371205-60371224 | None:intergenic | 45.0% | |
| TCATGAGTGATGGTATGAGG+AGG | + | chr1.4:60370135-60370154 | MS.gene004757:CDS | 45.0% | |
| TCCGTTGCTTCTCAAAGTGA+AGG | + | chr1.4:60369422-60369441 | MS.gene004757:CDS | 45.0% | |
| TCCTCTCATCACCCATAACA+TGG | - | chr1.4:60370442-60370461 | None:intergenic | 45.0% | |
| TCCTGATTGCTCCAAGATCT+AGG | - | chr1.4:60369942-60369961 | None:intergenic | 45.0% | |
| TCTGCCCTCATATCTATCAC+TGG | - | chr1.4:60370711-60370730 | None:intergenic | 45.0% | |
| TGCTTCTCAAAGTGAAGGTC+AGG | + | chr1.4:60369427-60369446 | MS.gene004757:CDS | 45.0% | |
| TGGATTGTAACCATGGGGAA+GGG | + | chr1.4:60370501-60370520 | MS.gene004757:CDS | 45.0% | |
| TGTTATGGGTGATGAGAGGA+GGG | + | chr1.4:60370442-60370461 | MS.gene004757:CDS | 45.0% | |
| TTCTTCTGCACTTGCAGTCA+AGG | - | chr1.4:60371712-60371731 | None:intergenic | 45.0% | |
| ! | AGGCCTATGCACTCGATTTT+GGG | + | chr1.4:60370155-60370174 | MS.gene004757:CDS | 45.0% |
| ! | GCACGCTGCTTCTTTTATCA+TGG | - | chr1.4:60370351-60370370 | None:intergenic | 45.0% |
| ! | TGATGAGAGGAGGGTTTTTC+AGG | + | chr1.4:60370451-60370470 | MS.gene004757:CDS | 45.0% |
| !! | CGAAAACCGGTTTTGATGCA+AGG | + | chr1.4:60371777-60371796 | MS.gene004757:CDS | 45.0% |
| AATAGCCATCTCTGAACCCG+GGG | + | chr1.4:60371404-60371423 | MS.gene004757:CDS | 50.0% | |
| ACTAGATGAGCTTGGTCTCC+AGG | - | chr1.4:60370594-60370613 | None:intergenic | 50.0% | |
| ACTGGTATATGTCCTACCCC+CGG | - | chr1.4:60370693-60370712 | None:intergenic | 50.0% | |
| AGGAACACCTGAGCTAACTC+AGG | + | chr1.4:60369875-60369894 | MS.gene004757:CDS | 50.0% | |
| ATCCTTTGCAGAGCTGTCCA+TGG | - | chr1.4:60370285-60370304 | None:intergenic | 50.0% | |
| ATCTTGGAGCAATCAGGAGC+TGG | + | chr1.4:60369944-60369963 | MS.gene004757:CDS | 50.0% | |
| ATTGTAACCATGGGGAAGGG+GGG | + | chr1.4:60370504-60370523 | MS.gene004757:CDS | 50.0% | |
| CAAGATCTAGGTTCTTCGGC+CGG | - | chr1.4:60369930-60369949 | None:intergenic | 50.0% | |
| CAATAGCCATCTCTGAACCC+GGG | + | chr1.4:60371403-60371422 | MS.gene004757:CDS | 50.0% | |
| CTGGATTGTAACCATGGGGA+AGG | + | chr1.4:60370500-60370519 | MS.gene004757:CDS | 50.0% | |
| GAATGCTATGATGGCAAGCC+AGG | + | chr1.4:60370091-60370110 | MS.gene004757:CDS | 50.0% | |
| GACAGCTCTGCAAAGGATGA+TGG | + | chr1.4:60370287-60370306 | MS.gene004757:CDS | 50.0% | |
| GAGAGGTCTGCAAGTTCTGT+TGG | + | chr1.4:60371461-60371480 | MS.gene004757:CDS | 50.0% | |
| GATTGTAACCATGGGGAAGG+GGG | + | chr1.4:60370503-60370522 | MS.gene004757:CDS | 50.0% | |
| GCAATAGCCATCTCTGAACC+CGG | + | chr1.4:60371402-60371421 | MS.gene004757:CDS | 50.0% | |
| GCTCGAACGTCCCTTTCAAA+TGG | + | chr1.4:60369232-60369251 | MS.gene004757:CDS | 50.0% | |
| GGATTGTAACCATGGGGAAG+GGG | + | chr1.4:60370502-60370521 | MS.gene004757:CDS | 50.0% | |
| GGCGAGAAGGAATGCTATGA+TGG | + | chr1.4:60370082-60370101 | MS.gene004757:CDS | 50.0% | |
| TGGAGACCAAGCTCATCTAG+TGG | + | chr1.4:60370593-60370612 | MS.gene004757:CDS | 50.0% | |
| TTCCGTGACTTCCGCTTCTA+CGG | + | chr1.4:60371542-60371561 | MS.gene004757:CDS | 50.0% | |
| ! | GAGGCCTATGCACTCGATTT+TGG | + | chr1.4:60370154-60370173 | MS.gene004757:CDS | 50.0% |
| !! | CTTGGTGTTTCTAGTGACGC+AGG | + | chr1.4:60369801-60369820 | MS.gene004757:CDS | 50.0% |
| !! | GTTGCGTTCTGAAGATTCCC+CGG | - | chr1.4:60371424-60371443 | None:intergenic | 50.0% |
| !! | TGTTTCTAGTGACGCAGGAC+CGG | + | chr1.4:60369806-60369825 | MS.gene004757:CDS | 50.0% |
| !! | TTGCGTTCTGAAGATTCCCC+GGG | - | chr1.4:60371423-60371442 | None:intergenic | 50.0% |
| AGATTCCCCGGGTTCAGAGA+TGG | - | chr1.4:60371412-60371431 | None:intergenic | 55.0% | |
| ATGGATTCGAAGTCGCCGCA+AGG | + | chr1.4:60371646-60371665 | MS.gene004757:CDS | 55.0% | |
| CGCAGTTGCACAAGACACCA+AGG | - | chr1.4:60369382-60369401 | None:intergenic | 55.0% | |
| CGGCCGAAGAACCTAGATCT+TGG | + | chr1.4:60369928-60369947 | MS.gene004757:CDS | 55.0% | |
| CTGGTATATGTCCTACCCCC+GGG | - | chr1.4:60370692-60370711 | None:intergenic | 55.0% | |
| GAGCTTTGCAACTGGCGAGA+AGG | + | chr1.4:60370069-60370088 | MS.gene004757:CDS | 55.0% | |
| GCGCAATCGAGCTTTGCAAC+TGG | + | chr1.4:60370061-60370080 | MS.gene004757:CDS | 55.0% | |
| GGCATTCGAATGGCAGCAAC+CGG | - | chr1.4:60369828-60369847 | None:intergenic | 55.0% | |
| TCCCGTAGAAGCGGAAGTCA+CGG | - | chr1.4:60371547-60371566 | None:intergenic | 55.0% | |
| TCCGTGACTTCCGCTTCTAC+GGG | + | chr1.4:60371543-60371562 | MS.gene004757:CDS | 55.0% | |
| TCGAAGTCGCCGCAAGGATT+CGG | + | chr1.4:60371652-60371671 | MS.gene004757:CDS | 55.0% | |
| TGCAGCATGCGATAGAGCCA+CGG | - | chr1.4:60370000-60370019 | None:intergenic | 55.0% | |
| TGCCATGGACAGCTCTGCAA+AGG | + | chr1.4:60370280-60370299 | MS.gene004757:CDS | 55.0% | |
| !! | GCGCTTGCTGTTTCCAGTCT+TGG | + | chr1.4:60369783-60369802 | MS.gene004757:CDS | 55.0% |
| !! | GGGCTTGGGTTTTGTGGTTG+AGG | + | chr1.4:60370397-60370416 | MS.gene004757:CDS | 55.0% |
| !! | TTTCGAGTTTCGGCAGACGC+TGG | + | chr1.4:60370536-60370555 | MS.gene004757:CDS | 55.0% |
| AGCTCAGTGTCCTCAGGTCC+CGG | + | chr1.4:60370671-60370690 | MS.gene004757:CDS | 60.0% | |
| CAGACGCTGGAAGTCAAGGG+AGG | + | chr1.4:60370549-60370568 | MS.gene004757:CDS | 60.0% | |
| CGGCAGACGCTGGAAGTCAA+GGG | + | chr1.4:60370546-60370565 | MS.gene004757:CDS | 60.0% | |
| GACATGGGATCTTGGACGGG+AGG | + | chr1.4:60369470-60369489 | MS.gene004757:CDS | 60.0% | |
| GTTGGCAGCTCAGTGTCCTC+AGG | + | chr1.4:60370665-60370684 | MS.gene004757:CDS | 60.0% | |
| TCGGCAGACGCTGGAAGTCA+AGG | + | chr1.4:60370545-60370564 | MS.gene004757:CDS | 60.0% | |
| TGGGATCTTGGACGGGAGGT+TGG | + | chr1.4:60369474-60369493 | MS.gene004757:CDS | 60.0% | |
| ! | GGTTGCTGATCAGGTTGCCG+TGG | + | chr1.4:60369980-60369999 | MS.gene004757:CDS | 60.0% |
| CTAGGATCCCCCCTTCCCCA+TGG | - | chr1.4:60370514-60370533 | None:intergenic | 65.0% | |
| CTCAGTGTCCTCAGGTCCCG+GGG | + | chr1.4:60370673-60370692 | MS.gene004757:CDS | 65.0% | |
| GCTCAGTGTCCTCAGGTCCC+GGG | + | chr1.4:60370672-60370691 | MS.gene004757:CDS | 65.0% | |
| TCAGTGTCCTCAGGTCCCGG+GGG | + | chr1.4:60370674-60370693 | MS.gene004757:CDS | 65.0% | |
| TGTCCTACCCCCGGGACCTG+AGG | - | chr1.4:60370684-60370703 | None:intergenic | 70.0% | |
| TGTCCTCAGGTCCCGGGGGT+AGG | + | chr1.4:60370678-60370697 | MS.gene004757:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 60369021 | 60371845 | 60369021 | ID=MS.gene004757 |
| chr1.4 | mRNA | 60369021 | 60371845 | 60369021 | ID=MS.gene004757.t1;Parent=MS.gene004757 |
| chr1.4 | exon | 60369021 | 60370763 | 60369021 | ID=MS.gene004757.t1.exon1;Parent=MS.gene004757.t1 |
| chr1.4 | CDS | 60369021 | 60370763 | 60369021 | ID=cds.MS.gene004757.t1;Parent=MS.gene004757.t1 |
| chr1.4 | exon | 60371309 | 60371845 | 60371309 | ID=MS.gene004757.t1.exon2;Parent=MS.gene004757.t1 |
| chr1.4 | CDS | 60371309 | 60371845 | 60371309 | ID=cds.MS.gene004757.t1;Parent=MS.gene004757.t1 |
| Gene Sequence |
| Protein sequence |
