Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025978.t1 | XP_003626476.1 | 93.6 | 689 | 13 | 2 | 27 | 684 | 77 | 765 | 0.00E+00 | 1219.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025978.t1 | Q9ZTP3 | 55.3 | 700 | 268 | 6 | 27 | 682 | 68 | 766 | 3.7e-200 | 699.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025978.t1 | G7L2X0 | 93.6 | 689 | 13 | 2 | 27 | 684 | 77 | 765 | 0.0e+00 | 1219.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene025978.t1 | TR | Others |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene004757 | MS.gene025978 | PPI |
| MS.gene048850 | MS.gene025978 | PPI |
| MS.gene32142 | MS.gene025978 | PPI |
| MS.gene90940 | MS.gene025978 | PPI |
| MS.gene030357 | MS.gene025978 | PPI |
| MS.gene90941 | MS.gene025978 | PPI |
| MS.gene02513 | MS.gene025978 | PPI |
| MS.gene073869 | MS.gene025978 | PPI |
| MS.gene65517 | MS.gene025978 | PPI |
| MS.gene052918 | MS.gene025978 | PPI |
| MS.gene048848 | MS.gene025978 | PPI |
| MS.gene02623 | MS.gene025978 | PPI |
| MS.gene55723 | MS.gene025978 | PPI |
| MS.gene053421 | MS.gene025978 | PPI |
| MS.gene63969 | MS.gene025978 | PPI |
| MS.gene048849 | MS.gene025978 | PPI |
| MS.gene048847 | MS.gene025978 | PPI |
| MS.gene048846 | MS.gene025978 | PPI |
| MS.gene013718 | MS.gene025978 | PPI |
| MS.gene51452 | MS.gene025978 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025978.t1 | MTR_7g116330 | 93.614 | 689 | 13 | 2 | 27 | 684 | 77 | 765 | 0.0 | 1310 |
| MS.gene025978.t1 | MTR_1g079790 | 69.841 | 693 | 172 | 6 | 28 | 684 | 71 | 762 | 0.0 | 951 |
| MS.gene025978.t1 | MTR_1g073840 | 55.667 | 697 | 267 | 7 | 21 | 680 | 66 | 757 | 0.0 | 771 |
| MS.gene025978.t1 | MTR_1g044210 | 51.289 | 698 | 294 | 9 | 21 | 677 | 65 | 757 | 0.0 | 701 |
| MS.gene025978.t1 | MTR_1g079790 | 70.019 | 517 | 119 | 5 | 28 | 509 | 71 | 586 | 0.0 | 696 |
| MS.gene025978.t1 | MTR_4g031150 | 37.073 | 731 | 392 | 14 | 3 | 679 | 67 | 783 | 1.11e-140 | 431 |
| MS.gene025978.t1 | MTR_7g109150 | 35.526 | 608 | 299 | 14 | 8 | 554 | 23 | 598 | 2.94e-91 | 297 |
| MS.gene025978.t1 | MTR_4g134880 | 53.425 | 73 | 33 | 1 | 609 | 680 | 1 | 73 | 5.33e-20 | 85.1 |
| MS.gene025978.t1 | MTR_8g080770 | 33.562 | 146 | 84 | 4 | 547 | 680 | 717 | 861 | 1.43e-17 | 87.8 |
| MS.gene025978.t1 | MTR_8g080770 | 33.562 | 146 | 84 | 4 | 547 | 680 | 826 | 970 | 1.56e-17 | 87.8 |
| MS.gene025978.t1 | MTR_3g085130 | 36.508 | 126 | 68 | 4 | 557 | 673 | 695 | 817 | 1.47e-15 | 81.3 |
| MS.gene025978.t1 | MTR_3g085130 | 36.508 | 126 | 68 | 4 | 557 | 673 | 905 | 1027 | 2.39e-15 | 80.5 |
| MS.gene025978.t1 | MTR_8g075340 | 35.878 | 131 | 64 | 4 | 553 | 664 | 1024 | 1153 | 2.10e-13 | 74.3 |
| MS.gene025978.t1 | MTR_5g097410 | 34.127 | 126 | 58 | 4 | 560 | 663 | 1076 | 1198 | 4.94e-12 | 70.1 |
| MS.gene025978.t1 | MTR_8g106150 | 33.600 | 125 | 63 | 3 | 557 | 664 | 617 | 738 | 1.46e-11 | 68.2 |
| MS.gene025978.t1 | MTR_8g106150 | 33.600 | 125 | 63 | 3 | 557 | 664 | 860 | 981 | 1.57e-11 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025978.t1 | AT3G04580 | 59.317 | 703 | 235 | 6 | 27 | 682 | 68 | 766 | 0.0 | 805 |
| MS.gene025978.t1 | AT3G04580 | 59.317 | 703 | 235 | 6 | 27 | 682 | 68 | 766 | 0.0 | 805 |
| MS.gene025978.t1 | AT3G23150 | 49.861 | 718 | 288 | 14 | 21 | 682 | 70 | 771 | 0.0 | 622 |
| MS.gene025978.t1 | AT3G23150 | 58.531 | 422 | 159 | 7 | 21 | 439 | 70 | 478 | 9.96e-154 | 458 |
| MS.gene025978.t1 | AT1G66340 | 37.449 | 729 | 386 | 15 | 3 | 677 | 17 | 729 | 1.86e-141 | 431 |
| MS.gene025978.t1 | AT1G04310 | 42.962 | 547 | 260 | 8 | 31 | 535 | 82 | 618 | 1.01e-135 | 413 |
| MS.gene025978.t1 | AT1G04310 | 42.962 | 547 | 260 | 8 | 31 | 535 | 82 | 618 | 1.01e-135 | 413 |
| MS.gene025978.t1 | AT2G40940 | 36.000 | 575 | 321 | 12 | 8 | 541 | 22 | 590 | 1.24e-94 | 305 |
| MS.gene025978.t1 | AT5G35750 | 34.228 | 149 | 68 | 4 | 543 | 663 | 1013 | 1159 | 1.50e-13 | 75.1 |
| MS.gene025978.t1 | AT2G01830 | 36.752 | 117 | 61 | 4 | 557 | 663 | 933 | 1046 | 2.53e-13 | 74.3 |
| MS.gene025978.t1 | AT2G01830 | 36.752 | 117 | 61 | 4 | 557 | 663 | 944 | 1057 | 2.56e-13 | 74.3 |
| MS.gene025978.t1 | AT2G01830 | 36.752 | 117 | 61 | 4 | 557 | 663 | 921 | 1034 | 2.65e-13 | 74.3 |
| MS.gene025978.t1 | AT2G01830 | 36.752 | 117 | 61 | 4 | 557 | 663 | 921 | 1034 | 2.65e-13 | 74.3 |
| MS.gene025978.t1 | AT2G01830 | 36.752 | 117 | 61 | 4 | 557 | 663 | 921 | 1034 | 2.65e-13 | 74.3 |
| MS.gene025978.t1 | AT2G01830 | 36.752 | 117 | 61 | 4 | 557 | 663 | 921 | 1034 | 2.65e-13 | 74.3 |
| MS.gene025978.t1 | AT1G27320 | 29.927 | 137 | 75 | 3 | 557 | 673 | 889 | 1024 | 3.23e-13 | 73.9 |
| MS.gene025978.t1 | AT1G27320 | 27.273 | 154 | 112 | 0 | 285 | 438 | 410 | 563 | 3.47e-11 | 67.4 |
Find 168 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCAATGTTCCATTTAAAT+TGG | 0.194829 | 7.1:+1636823 | MS.gene025978:CDS |
| TGAAGGAATACCAATTTAAA+TGG | 0.204373 | 7.1:-1636833 | None:intergenic |
| CTCTATTTCTGTAAATGATT+TGG | 0.214081 | 7.1:+1637309 | MS.gene025978:CDS |
| TTGGAGTGTACAAAGTATTT+TGG | 0.234119 | 7.1:+1636721 | MS.gene025978:CDS |
| AAGTATAGGCATTGAGTAAA+TGG | 0.235188 | 7.1:-1636889 | None:intergenic |
| ACCATTCAAAATCATCCTTT+TGG | 0.252407 | 7.1:+1639435 | MS.gene025978:CDS |
| CTCAATGCCTATACTTACTA+TGG | 0.275621 | 7.1:+1636896 | MS.gene025978:CDS |
| ACTTCAAAACCATCCATTTC+AGG | 0.281316 | 7.1:-1639469 | None:intergenic |
| GGAAGTTCCAAAGCCGAAAT+TGG | 0.286448 | 7.1:+1639506 | MS.gene025978:CDS |
| CTACTAGCACTATTTAAAAT+TGG | 0.299995 | 7.1:-1638270 | None:intergenic |
| ATCTTATGCTATACTAGTTT+TGG | 0.300114 | 7.1:+1637501 | MS.gene025978:CDS |
| CAAAGCCTTGAGTTCGATTT+CGG | 0.313490 | 7.1:-1637529 | None:intergenic |
| CCGCGAGATTAGGAAGTCTT+TGG | 0.313919 | 7.1:+1637138 | MS.gene025978:CDS |
| TCAAAGGCCAATTTCGGCTT+TGG | 0.315320 | 7.1:-1639513 | None:intergenic |
| GGAAATGTTTCAACTCTAAC+TGG | 0.322814 | 7.1:-1637918 | None:intergenic |
| TGAAAACTCTTCGCCGGATT+CGG | 0.327965 | 7.1:-1637283 | None:intergenic |
| CTTCTTCTCAAGTTTCAATC+AGG | 0.328501 | 7.1:+1639217 | MS.gene025978:CDS |
| GATAAGGATGATAGAAGTTC+TGG | 0.333479 | 7.1:+1638162 | MS.gene025978:CDS |
| AAGTTTAATTTCCAGATAAC+TGG | 0.338812 | 7.1:+1638225 | MS.gene025978:CDS |
| GGGAACTAGTACCAGTTATC+TGG | 0.355067 | 7.1:-1638236 | None:intergenic |
| CGAAATCGAACTCAAGGCTT+TGG | 0.361339 | 7.1:+1637530 | MS.gene025978:CDS |
| TGTGCCAAACCCAGAGAGTT+TGG | 0.362144 | 7.1:-1639184 | None:intergenic |
| AGGAGGCTAGTTGGCATGTT+AGG | 0.362594 | 7.1:+1637107 | MS.gene025978:CDS |
| CAATAATCAAAGGCCAATTT+CGG | 0.365522 | 7.1:-1639519 | None:intergenic |
| CTGGATATCACCAAACTCTC+TGG | 0.365884 | 7.1:+1639174 | MS.gene025978:CDS |
| GGATCTTCAAATGCCTGAAA+TGG | 0.366381 | 7.1:+1639456 | MS.gene025978:CDS |
| TCATCACCTATTACCATATC+AGG | 0.368786 | 7.1:-1638036 | None:intergenic |
| TGGAATTGGGGCAAGAGGTT+GGG | 0.375142 | 7.1:+1637068 | MS.gene025978:CDS |
| TTGGAATTGGGGCAAGAGGT+TGG | 0.382688 | 7.1:+1637067 | MS.gene025978:CDS |
| TAAGAAGCTGCTTGAGAAGC+TGG | 0.383208 | 7.1:+1639348 | MS.gene025978:CDS |
| GCAGAGATCCTTGCCTGATA+TGG | 0.386198 | 7.1:+1638023 | MS.gene025978:CDS |
| GCTGCGAGTAGTGGTGAATC+TGG | 0.386274 | 7.1:+1637394 | MS.gene025978:CDS |
| GCAAAACCGGGCGTTGCAAC+AGG | 0.388211 | 7.1:+1637663 | MS.gene025978:CDS |
| GAAGCAGAATGTGTTGGAAT+TGG | 0.390130 | 7.1:+1637054 | MS.gene025978:CDS |
| AGAAACTTAAAGAGCAAAAC+CGG | 0.390137 | 7.1:+1637650 | MS.gene025978:CDS |
| CCCTCATCGTGGAATGTAGA+TGG | 0.392008 | 7.1:-1637939 | None:intergenic |
| GAGACCTTTGCATTCAATCC+TGG | 0.400066 | 7.1:+1637756 | MS.gene025978:CDS |
| AAATGAGCTCCTTGCCTGGC+TGG | 0.400987 | 7.1:-1637707 | None:intergenic |
| AAGCAGAATGTGTTGGAATT+GGG | 0.402075 | 7.1:+1637055 | MS.gene025978:CDS |
| AAGTGTTTGTGTGTGTATAA+AGG | 0.402755 | 7.1:+1637979 | MS.gene025978:CDS |
| TTAAAATTGGTCCATCTGAA+TGG | 0.402769 | 7.1:-1638257 | None:intergenic |
| TCCTTGCCTGATATGGTAAT+AGG | 0.403180 | 7.1:+1638030 | MS.gene025978:CDS |
| ATTATGCAACTCCAAGGCTT+TGG | 0.407308 | 7.1:-1637200 | None:intergenic |
| GGATGTTGACCCGCGAGATT+AGG | 0.409855 | 7.1:+1637128 | MS.gene025978:CDS |
| CCTCCTTAGGTTCATTGTTG+TGG | 0.420175 | 7.1:-1638299 | None:intergenic |
| GCAGCTCCGAGTGCAGAATC+AGG | 0.421232 | 7.1:-1637376 | None:intergenic |
| CAAGTAACCGCTGTTTCATC+GGG | 0.427661 | 7.1:+1639376 | MS.gene025978:CDS |
| GCATGCAATGATGGCCAGCC+AGG | 0.428498 | 7.1:+1637693 | MS.gene025978:CDS |
| TGTTGAGCTTTCCAAAGCCT+TGG | 0.429033 | 7.1:+1637189 | MS.gene025978:CDS |
| AAGTGCAGAAGAACGCATAA+AGG | 0.432930 | 7.1:+1639552 | MS.gene025978:CDS |
| TGCCTACAGGTGGGAATGAA+TGG | 0.434232 | 7.1:+1639580 | MS.gene025978:CDS |
| AGATGATGGAAGGTAATATC+TGG | 0.435995 | 7.1:+1639155 | MS.gene025978:intron |
| TCTCAAATGAGCTCCTTGCC+TGG | 0.436435 | 7.1:-1637711 | None:intergenic |
| TTGTGTGTGTATAAAGGCTT+TGG | 0.437175 | 7.1:+1637985 | MS.gene025978:CDS |
| GGCACAAAAGCATGCAATGA+TGG | 0.437900 | 7.1:+1637684 | MS.gene025978:CDS |
| TCAAGTAACCGCTGTTTCAT+CGG | 0.439160 | 7.1:+1639375 | MS.gene025978:CDS |
| ATATCTGTTTATGGGATTGA+TGG | 0.441688 | 7.1:+1636656 | None:intergenic |
| ATCACCAAACTCTCTGGGTT+TGG | 0.443024 | 7.1:+1639180 | MS.gene025978:CDS |
| CTGAAGCTTAGGCCCTCCTT+AGG | 0.443209 | 7.1:-1638312 | None:intergenic |
| TAAAATTGGTCCATCTGAAT+GGG | 0.443946 | 7.1:-1638256 | None:intergenic |
| AGTTGCATAATTGTGCGGTT+TGG | 0.452705 | 7.1:+1637212 | MS.gene025978:CDS |
| TCATGAGTTGAAGCCGAATC+CGG | 0.456399 | 7.1:+1637270 | MS.gene025978:CDS |
| CCACCATGAGATGGAGATAG+TGG | 0.458301 | 7.1:+1637555 | MS.gene025978:CDS |
| AGACCTTTGCATTCAATCCT+GGG | 0.459059 | 7.1:+1637757 | MS.gene025978:CDS |
| TTGAAGTTGCAAGGAAGATT+CGG | 0.459346 | 7.1:+1639485 | MS.gene025978:CDS |
| CCGATGATGATAATGTAAAC+AGG | 0.466113 | 7.1:+1639317 | MS.gene025978:CDS |
| GGATGCCTGATGAGGATAGA+AGG | 0.466923 | 7.1:+1637233 | MS.gene025978:CDS |
| CACTATCTCCATCTCATGGT+GGG | 0.473097 | 7.1:-1637554 | None:intergenic |
| TTTCAAAAGAAGAGGAATCA+AGG | 0.474095 | 7.1:-1637008 | None:intergenic |
| TTGAGGCCTGATTCTGCACT+CGG | 0.474787 | 7.1:+1637370 | MS.gene025978:CDS |
| CTGCGAGTAGTGGTGAATCT+GGG | 0.475786 | 7.1:+1637395 | MS.gene025978:CDS |
| CTGGAAACTTCCTTTGTCGT+TGG | 0.475889 | 7.1:-1637899 | None:intergenic |
| GTTAGAGATAAGAAAGAGCA+AGG | 0.479184 | 7.1:+1637336 | MS.gene025978:CDS |
| TGAAAGTGATACCGCAGATA+AGG | 0.485783 | 7.1:+1638146 | MS.gene025978:intron |
| CAGGCATTTGAAGATCCAAA+AGG | 0.486141 | 7.1:-1639450 | None:intergenic |
| AACTCTCTGGGTTTGGCACA+AGG | 0.491639 | 7.1:+1639187 | MS.gene025978:CDS |
| ATCACCCTTCTATCCTCATC+AGG | 0.491816 | 7.1:-1637238 | None:intergenic |
| TTTGTGCCTGTTGCAACGCC+CGG | 0.496643 | 7.1:-1637669 | None:intergenic |
| AAATTTGAAACATGAAGTAT+CGG | 0.504455 | 7.1:-1637448 | None:intergenic |
| TTCTTCCGAAATCGAACTCA+AGG | 0.505225 | 7.1:+1637524 | MS.gene025978:CDS |
| GCGTTTGATAAATGATGTAA+TGG | 0.505741 | 7.1:+1637867 | MS.gene025978:CDS |
| CTATGAAAGCAACAAATTGA+AGG | 0.510314 | 7.1:-1636850 | None:intergenic |
| CGTTAAGACCTCTAAACTGT+TGG | 0.510727 | 7.1:-1639285 | None:intergenic |
| GTTGCTTTCATAGTTCTATG+TGG | 0.512396 | 7.1:+1636860 | MS.gene025978:CDS |
| AGTATAGGCATTGAGTAAAT+GGG | 0.513040 | 7.1:-1636888 | None:intergenic |
| ATGAGGGCCATAGTAAGTAT+AGG | 0.515615 | 7.1:-1636903 | None:intergenic |
| TACCAATTTAAATGGAACAT+TGG | 0.516471 | 7.1:-1636825 | None:intergenic |
| CCTGTTTACATTATCATCAT+CGG | 0.516759 | 7.1:-1639317 | None:intergenic |
| AGAAACAATTGAAAGGAATG+AGG | 0.527304 | 7.1:-1636920 | None:intergenic |
| GCTATCTCATGAAGGAGGAT+AGG | 0.531373 | 7.1:-1639616 | None:intergenic |
| CATAAAGGAGAGATGCCTAC+AGG | 0.532003 | 7.1:+1639567 | MS.gene025978:CDS |
| CTTCAAATGCCTGAAATGGA+TGG | 0.537656 | 7.1:+1639460 | MS.gene025978:CDS |
| TTTCTTGAAGCAGAATGTGT+TGG | 0.539138 | 7.1:+1637048 | MS.gene025978:CDS |
| CATTTGCAAAACACTGGTGC+AGG | 0.542360 | 7.1:+1638335 | MS.gene025978:CDS |
| CAATGATGGCCAGCCAGGCA+AGG | 0.543126 | 7.1:+1637698 | MS.gene025978:CDS |
| AGAAACAGAAGGAGGCTAGT+TGG | 0.551296 | 7.1:+1637098 | MS.gene025978:CDS |
| GAGCTATGAAAACTCTTCGC+CGG | 0.551463 | 7.1:-1637289 | None:intergenic |
| AAAAGAAGAGGAATCAAGGT+GGG | 0.554060 | 7.1:-1637004 | None:intergenic |
| TTGCAGTGGCACATGAAACA+AGG | 0.555378 | 7.1:-1636973 | None:intergenic |
| TTAGAGATAAGAAAGAGCAA+GGG | 0.559027 | 7.1:+1637337 | MS.gene025978:CDS |
| GCAAAGGTCTCCTCATTCCA+TGG | 0.564414 | 7.1:-1637744 | None:intergenic |
| AAGTGATGAGCCATGGAATG+AGG | 0.565260 | 7.1:+1637734 | MS.gene025978:CDS |
| CCATCTACATTCCACGATGA+GGG | 0.566420 | 7.1:+1637939 | MS.gene025978:CDS |
| CCACAACAATGAACCTAAGG+AGG | 0.566649 | 7.1:+1638299 | MS.gene025978:CDS |
| ACGAATGGCTGCTACAGCAC+CGG | 0.566933 | 7.1:-1637422 | None:intergenic |
| AGTTGCTGACCAGGTTGCTG+TGG | 0.568847 | 7.1:+1637582 | MS.gene025978:CDS |
| CCACTATCTCCATCTCATGG+TGG | 0.569247 | 7.1:-1637555 | None:intergenic |
| TTTGCTTTCAATGTTTCAAG+AGG | 0.570011 | 7.1:+1637780 | MS.gene025978:CDS |
| AGTGGAGGTAGTTGCTGACC+AGG | 0.570687 | 7.1:+1637573 | MS.gene025978:CDS |
| TGGATATCACCAAACTCTCT+GGG | 0.571039 | 7.1:+1639175 | MS.gene025978:CDS |
| GAAACAATTGAAAGGAATGA+GGG | 0.573404 | 7.1:-1636919 | None:intergenic |
| AAGAAGCTGCTTGAGAAGCT+GGG | 0.574319 | 7.1:+1639349 | MS.gene025978:CDS |
| AGAACAGTCCTGCTACGTGC+AGG | 0.575168 | 7.1:+1639649 | MS.gene025978:CDS |
| GCACCACAACAATGAACCTA+AGG | 0.576436 | 7.1:+1638296 | MS.gene025978:CDS |
| AGTGGTGAATCTGGGGACTC+CGG | 0.577575 | 7.1:+1637403 | MS.gene025978:CDS |
| ACCTATTACCATATCAGGCA+AGG | 0.579803 | 7.1:-1638031 | None:intergenic |
| GAGAGATAGAAACAATTGAA+AGG | 0.580396 | 7.1:-1636927 | None:intergenic |
| GCACTCGGAGCTGCGAGTAG+TGG | 0.580746 | 7.1:+1637385 | MS.gene025978:CDS |
| GAAATTTCAGCCAACGACAA+AGG | 0.583389 | 7.1:+1637889 | MS.gene025978:CDS |
| TTTGAGAAAGTGATGAGCCA+TGG | 0.585455 | 7.1:+1637727 | MS.gene025978:CDS |
| GCTTTGGACCCACCATGAGA+TGG | 0.587831 | 7.1:+1637546 | MS.gene025978:CDS |
| AGCAGAATGTGTTGGAATTG+GGG | 0.589243 | 7.1:+1637056 | MS.gene025978:CDS |
| TGTGTTGGAATTGGGGCAAG+AGG | 0.591001 | 7.1:+1637063 | MS.gene025978:CDS |
| TAGAGATAAGAAAGAGCAAG+GGG | 0.591331 | 7.1:+1637338 | MS.gene025978:CDS |
| CTTCAGCATTTGCAAAACAC+TGG | 0.591426 | 7.1:+1638329 | MS.gene025978:CDS |
| CAAAGACTTCCTAATCTCGC+GGG | 0.591973 | 7.1:-1637137 | None:intergenic |
| ACTCTCTGGGTTTGGCACAA+GGG | 0.593543 | 7.1:+1639188 | MS.gene025978:CDS |
| TCCATCTACATTCCACGATG+AGG | 0.594668 | 7.1:+1637938 | MS.gene025978:CDS |
| ATGAAGTATCGGCATACGAA+TGG | 0.595708 | 7.1:-1637437 | None:intergenic |
| TGGGATTATGAAGAAACAGA+AGG | 0.598480 | 7.1:+1637087 | MS.gene025978:CDS |
| TTTAATGTACAGATGATGGA+AGG | 0.599238 | 7.1:+1639145 | MS.gene025978:intron |
| CCAAAGACTTCCTAATCTCG+CGG | 0.601574 | 7.1:-1637138 | None:intergenic |
| CTTGGAGTTGCATAATTGTG+CGG | 0.602360 | 7.1:+1637207 | MS.gene025978:CDS |
| TTTATACACACACAAACACT+TGG | 0.603367 | 7.1:-1637977 | None:intergenic |
| GCTGTAAGAGCAATAATCAA+AGG | 0.605453 | 7.1:-1639529 | None:intergenic |
| GGTACTAGTTCCCATTCAGA+TGG | 0.605734 | 7.1:+1638246 | MS.gene025978:CDS |
| GAGACAAGGCCACAGCAACC+TGG | 0.608666 | 7.1:-1637591 | None:intergenic |
| TGGTAATAGGTGATGAGGCA+AGG | 0.611503 | 7.1:+1638043 | MS.gene025978:CDS |
| GTTCGTTAGCTATCTCATGA+AGG | 0.613143 | 7.1:-1639624 | None:intergenic |
| TGCAGTGGCACATGAAACAA+GGG | 0.615264 | 7.1:-1636972 | None:intergenic |
| TGCGAGTAGTGGTGAATCTG+GGG | 0.617209 | 7.1:+1637396 | MS.gene025978:CDS |
| TAAGATGTCTCAACAAACTC+CGG | 0.617656 | 7.1:-1637484 | None:intergenic |
| CCTCCACTATCTCCATCTCA+TGG | 0.620492 | 7.1:-1637558 | None:intergenic |
| CGCACAATTATGCAACTCCA+AGG | 0.622141 | 7.1:-1637206 | None:intergenic |
| AAAGGAGAGATGCCTACAGG+TGG | 0.625741 | 7.1:+1639570 | MS.gene025978:CDS |
| AAAGAAGAGGAATCAAGGTG+GGG | 0.631154 | 7.1:-1637003 | None:intergenic |
| TTTCAATCAGGATCATCGCA+TGG | 0.633630 | 7.1:+1639229 | MS.gene025978:CDS |
| TGCGGTTTGGATGCCTGATG+AGG | 0.636065 | 7.1:+1637225 | MS.gene025978:CDS |
| AAGAACAGATGCATGAGACA+AGG | 0.644755 | 7.1:-1637605 | None:intergenic |
| AAACCCAGGATTGAATGCAA+AGG | 0.645170 | 7.1:-1637760 | None:intergenic |
| TTTGGAAAGCTCAACAAGTG+TGG | 0.647875 | 7.1:-1637182 | None:intergenic |
| CGTTAGCTATCTCATGAAGG+AGG | 0.649779 | 7.1:-1639621 | None:intergenic |
| GATGCCTGATGAGGATAGAA+GGG | 0.652796 | 7.1:+1637234 | MS.gene025978:CDS |
| GAAACATTGAAAGCAAACCC+AGG | 0.654290 | 7.1:-1637774 | None:intergenic |
| ATCAAAACCCGATGAAACAG+CGG | 0.664158 | 7.1:-1639383 | None:intergenic |
| AAGGAGAGATGCCTACAGGT+GGG | 0.666460 | 7.1:+1639571 | MS.gene025978:CDS |
| GCAAGAAGCTTCCCTCATCG+TGG | 0.667374 | 7.1:-1637950 | None:intergenic |
| TGATATGGTAATAGGTGATG+AGG | 0.667642 | 7.1:+1638038 | MS.gene025978:CDS |
| CACATGAAACAAGGGCAGTG+AGG | 0.669285 | 7.1:-1636964 | None:intergenic |
| CACAACAATGAACCTAAGGA+GGG | 0.669995 | 7.1:+1638300 | MS.gene025978:CDS |
| AGAGATAAGAAAGAGCAAGG+GGG | 0.671908 | 7.1:+1637339 | MS.gene025978:CDS |
| CCATGAGATGGAGATAGTGG+AGG | 0.673370 | 7.1:+1637558 | MS.gene025978:CDS |
| ACTTCTATCATCCTTATCTG+CGG | 0.674734 | 7.1:-1638157 | None:intergenic |
| GAAACTTAAAGAGCAAAACC+GGG | 0.674790 | 7.1:+1637651 | MS.gene025978:CDS |
| ATCCATTCATTCCCACCTGT+AGG | 0.679015 | 7.1:-1639582 | None:intergenic |
| CAAAAGAAGAGGAATCAAGG+TGG | 0.682155 | 7.1:-1637005 | None:intergenic |
| GGTGGGGAAAGTAATTGCAG+TGG | 0.686035 | 7.1:-1636987 | None:intergenic |
| GATTATGAAGAAACAGAAGG+AGG | 0.703737 | 7.1:+1637090 | MS.gene025978:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCTCTTTTTCAAATTTATA+TGG | + | chr7.1:1638364-1638383 | MS.gene025978:intron | 15.0% |
| !! | AATATTCAAAAGGTAAAAAG+TGG | - | chr7.1:1639059-1639078 | None:intergenic | 20.0% |
| !! | AATATTTAATGTACAGATGA+TGG | + | chr7.1:1639141-1639160 | MS.gene025978:intron | 20.0% |
| !! | ATCAACAAAAACTTAAACAA+AGG | - | chr7.1:1638396-1638415 | None:intergenic | 20.0% |
| !! | TATTGAACTTATATGATAGA+GGG | + | chr7.1:1638100-1638119 | MS.gene025978:intron | 20.0% |
| !! | TCTGTACATTAAATATTGTA+TGG | - | chr7.1:1639138-1639157 | None:intergenic | 20.0% |
| !! | TTATTGAACTTATATGATAG+AGG | + | chr7.1:1638099-1638118 | MS.gene025978:intron | 20.0% |
| !!! | AAATTTGAAACATGAAGTAT+CGG | - | chr7.1:1637451-1637470 | None:intergenic | 20.0% |
| !!! | ATGTTTCAAATTTTAAAGGA+GGG | + | chr7.1:1637458-1637477 | MS.gene025978:CDS | 20.0% |
| !!! | CAATTAATTTTGCATATGAT+CGG | + | chr7.1:1638072-1638091 | MS.gene025978:intron | 20.0% |
| !!! | CTATCAATAAAATTAGTTTG+TGG | + | chr7.1:1638623-1638642 | MS.gene025978:intron | 20.0% |
| !!! | CTTCATGTTTCAAATTTTAA+AGG | + | chr7.1:1637454-1637473 | MS.gene025978:CDS | 20.0% |
| ! | AACCACACTATAAATAATAC+TGG | - | chr7.1:1638750-1638769 | None:intergenic | 25.0% |
| ! | AACCAGTATTATTTATAGTG+TGG | + | chr7.1:1638745-1638764 | MS.gene025978:intron | 25.0% |
| ! | AGTATCTATTCATCACAAAT+CGG | + | chr7.1:1638788-1638807 | MS.gene025978:intron | 25.0% |
| ! | ATGAATAGATACTAAGAATG+AGG | - | chr7.1:1638781-1638800 | None:intergenic | 25.0% |
| ! | CTAAATGAAGAATGAAATAG+CGG | + | chr7.1:1638830-1638849 | MS.gene025978:intron | 25.0% |
| ! | TACCAATTTAAATGGAACAT+TGG | - | chr7.1:1636828-1636847 | None:intergenic | 25.0% |
| ! | TGAAGGAATACCAATTTAAA+TGG | - | chr7.1:1636836-1636855 | None:intergenic | 25.0% |
| ! | TTATTTATAGTGTGGTTTCT+TGG | + | chr7.1:1638753-1638772 | MS.gene025978:intron | 25.0% |
| ! | TTCACTTATTCAGATAATTG+AGG | - | chr7.1:1638557-1638576 | None:intergenic | 25.0% |
| !! | AAGTTTAATTTCCAGATAAC+TGG | + | chr7.1:1638225-1638244 | MS.gene025978:CDS | 25.0% |
| !! | CAATTTTAAATAGTGCTAGT+AGG | + | chr7.1:1638271-1638290 | MS.gene025978:CDS | 25.0% |
| !! | CTACTAGCACTATTTAAAAT+TGG | - | chr7.1:1638273-1638292 | None:intergenic | 25.0% |
| !!! | ATCTTATGCTATACTAGTTT+TGG | + | chr7.1:1637501-1637520 | MS.gene025978:CDS | 25.0% |
| !!! | CATGTTTCAAATTTTAAAGG+AGG | + | chr7.1:1637457-1637476 | MS.gene025978:CDS | 25.0% |
| !!! | CTCTATTTCTGTAAATGATT+TGG | + | chr7.1:1637309-1637328 | MS.gene025978:CDS | 25.0% |
| !!! | TCAATAAAATTAGTTTGTGG+TGG | + | chr7.1:1638626-1638645 | MS.gene025978:intron | 25.0% |
| AACAAAGTAAAGTAGCTCAA+GGG | - | chr7.1:1636798-1636817 | None:intergenic | 30.0% | |
| AAGTGTTTGTGTGTGTATAA+AGG | + | chr7.1:1637979-1637998 | MS.gene025978:CDS | 30.0% | |
| AGAAACAATTGAAAGGAATG+AGG | - | chr7.1:1636923-1636942 | None:intergenic | 30.0% | |
| AGAAACTTAAAGAGCAAAAC+CGG | + | chr7.1:1637650-1637669 | MS.gene025978:CDS | 30.0% | |
| AGGTAAAAAGTGGAAAAAAG+TGG | - | chr7.1:1639049-1639068 | None:intergenic | 30.0% | |
| AGTTGCATCTACACTAAATA+GGG | - | chr7.1:1638701-1638720 | None:intergenic | 30.0% | |
| CAATAATCAAAGGCCAATTT+CGG | - | chr7.1:1639522-1639541 | None:intergenic | 30.0% | |
| CCTGTTTACATTATCATCAT+CGG | - | chr7.1:1639320-1639339 | None:intergenic | 30.0% | |
| CTATGAAAGCAACAAATTGA+AGG | - | chr7.1:1636853-1636872 | None:intergenic | 30.0% | |
| CTCCAATGTTCCATTTAAAT+TGG | + | chr7.1:1636823-1636842 | MS.gene025978:CDS | 30.0% | |
| GAAACAATTGAAAGGAATGA+GGG | - | chr7.1:1636922-1636941 | None:intergenic | 30.0% | |
| GAGAGATAGAAACAATTGAA+AGG | - | chr7.1:1636930-1636949 | None:intergenic | 30.0% | |
| GCGTTTGATAAATGATGTAA+TGG | + | chr7.1:1637867-1637886 | MS.gene025978:CDS | 30.0% | |
| GTGAATCAAGCATATGTTAT+AGG | - | chr7.1:1639088-1639107 | None:intergenic | 30.0% | |
| GTTACAAAACAATCACACAA+TGG | - | chr7.1:1639110-1639129 | None:intergenic | 30.0% | |
| TAAAATTGGTCCATCTGAAT+GGG | - | chr7.1:1638259-1638278 | None:intergenic | 30.0% | |
| TAACAAAGTAAAGTAGCTCA+AGG | - | chr7.1:1636799-1636818 | None:intergenic | 30.0% | |
| TAGGACACAGAATATTCAAA+AGG | - | chr7.1:1639069-1639088 | None:intergenic | 30.0% | |
| TAGTTGCATCTACACTAAAT+AGG | - | chr7.1:1638702-1638721 | None:intergenic | 30.0% | |
| TTAAAATTGGTCCATCTGAA+TGG | - | chr7.1:1638260-1638279 | None:intergenic | 30.0% | |
| TTAGAGATAAGAAAGAGCAA+GGG | + | chr7.1:1637337-1637356 | MS.gene025978:CDS | 30.0% | |
| TTTATACACACACAAACACT+TGG | - | chr7.1:1637980-1637999 | None:intergenic | 30.0% | |
| TTTCAAAAGAAGAGGAATCA+AGG | - | chr7.1:1637011-1637030 | None:intergenic | 30.0% | |
| TTTGCTTTCAATGTTTCAAG+AGG | + | chr7.1:1637780-1637799 | MS.gene025978:CDS | 30.0% | |
| ! | AATCGTTGTGTCAGATTTTT+AGG | + | chr7.1:1638652-1638671 | MS.gene025978:intron | 30.0% |
| ! | ACCATTCAAAATCATCCTTT+TGG | + | chr7.1:1639435-1639454 | MS.gene025978:CDS | 30.0% |
| ! | ACCTTGATTTTCAAAAGAAG+AGG | - | chr7.1:1637019-1637038 | None:intergenic | 30.0% |
| ! | AGGGGGCTTTTTAAATTTAT+TGG | - | chr7.1:1638682-1638701 | None:intergenic | 30.0% |
| ! | CGCTATTTCATTCTTCATTT+AGG | - | chr7.1:1638832-1638851 | None:intergenic | 30.0% |
| ! | GATGATTTTGAATGGTATAC+TGG | - | chr7.1:1639431-1639450 | None:intergenic | 30.0% |
| ! | TCCAAAAGGATGATTTTGAA+TGG | - | chr7.1:1639439-1639458 | None:intergenic | 30.0% |
| ! | TCTTGGTTTGACAAAATTTC+CGG | + | chr7.1:1638528-1638547 | MS.gene025978:intron | 30.0% |
| ! | TTTTCAAACCAACAGTTTAG+AGG | + | chr7.1:1639277-1639296 | MS.gene025978:CDS | 30.0% |
| !! | AAGTATAGGCATTGAGTAAA+TGG | - | chr7.1:1636892-1636911 | None:intergenic | 30.0% |
| !! | AGTATAGGCATTGAGTAAAT+GGG | - | chr7.1:1636891-1636910 | None:intergenic | 30.0% |
| !! | ATGATGATGATGATGGAATT+TGG | + | chr7.1:1636702-1636721 | MS.gene025978:CDS | 30.0% |
| !! | TCCTCTTCTTTTGAAAATCA+AGG | + | chr7.1:1637015-1637034 | MS.gene025978:CDS | 30.0% |
| !! | TCTTTTGAAAATCAAGGTGA+GGG | + | chr7.1:1637021-1637040 | MS.gene025978:CDS | 30.0% |
| !! | TTCTTTTGAAAATCAAGGTG+AGG | + | chr7.1:1637020-1637039 | MS.gene025978:CDS | 30.0% |
| !! | TTGGAGTGTACAAAGTATTT+TGG | + | chr7.1:1636721-1636740 | MS.gene025978:CDS | 30.0% |
| !! | TTTAATGTACAGATGATGGA+AGG | + | chr7.1:1639145-1639164 | MS.gene025978:intron | 30.0% |
| AAAAGAAGAGGAATCAAGGT+GGG | - | chr7.1:1637007-1637026 | None:intergenic | 35.0% | |
| AAGCAGAATGTGTTGGAATT+GGG | + | chr7.1:1637055-1637074 | MS.gene025978:CDS | 35.0% | |
| ACAAAGTAAAGTAGCTCAAG+GGG | - | chr7.1:1636797-1636816 | None:intergenic | 35.0% | |
| ACTTCAAAACCATCCATTTC+AGG | - | chr7.1:1639472-1639491 | None:intergenic | 35.0% | |
| ACTTCTATCATCCTTATCTG+CGG | - | chr7.1:1638160-1638179 | None:intergenic | 35.0% | |
| ATTCAGATAATTGAGGCTAC+CGG | - | chr7.1:1638550-1638569 | None:intergenic | 35.0% | |
| CTCAATGCCTATACTTACTA+TGG | + | chr7.1:1636896-1636915 | MS.gene025978:CDS | 35.0% | |
| CTTCTTCTCAAGTTTCAATC+AGG | + | chr7.1:1639217-1639236 | MS.gene025978:CDS | 35.0% | |
| GAAACTTAAAGAGCAAAACC+GGG | + | chr7.1:1637651-1637670 | MS.gene025978:CDS | 35.0% | |
| GATAAGGATGATAGAAGTTC+TGG | + | chr7.1:1638162-1638181 | MS.gene025978:CDS | 35.0% | |
| GATTATGAAGAAACAGAAGG+AGG | + | chr7.1:1637090-1637109 | MS.gene025978:CDS | 35.0% | |
| GCTGTAAGAGCAATAATCAA+AGG | - | chr7.1:1639532-1639551 | None:intergenic | 35.0% | |
| GGAAATGTTTCAACTCTAAC+TGG | - | chr7.1:1637921-1637940 | None:intergenic | 35.0% | |
| GGAGTAGAAACTTAATACAG+AGG | - | chr7.1:1639028-1639047 | None:intergenic | 35.0% | |
| GTTAGAGATAAGAAAGAGCA+AGG | + | chr7.1:1637336-1637355 | MS.gene025978:CDS | 35.0% | |
| GTTGCATCTACACTAAATAG+GGG | - | chr7.1:1638700-1638719 | None:intergenic | 35.0% | |
| TAAGATGTCTCAACAAACTC+CGG | - | chr7.1:1637487-1637506 | None:intergenic | 35.0% | |
| TAGAGATAAGAAAGAGCAAG+GGG | + | chr7.1:1637338-1637357 | MS.gene025978:CDS | 35.0% | |
| TCATCACCTATTACCATATC+AGG | - | chr7.1:1638039-1638058 | None:intergenic | 35.0% | |
| TGATATGGTAATAGGTGATG+AGG | + | chr7.1:1638038-1638057 | MS.gene025978:CDS | 35.0% | |
| TGCGTATCTGTTTATGATGT+TGG | + | chr7.1:1638585-1638604 | MS.gene025978:intron | 35.0% | |
| TGGGATTATGAAGAAACAGA+AGG | + | chr7.1:1637087-1637106 | MS.gene025978:CDS | 35.0% | |
| TTGAAGTTGCAAGGAAGATT+CGG | + | chr7.1:1639485-1639504 | MS.gene025978:CDS | 35.0% | |
| TTGCATCTACACTAAATAGG+GGG | - | chr7.1:1638699-1638718 | None:intergenic | 35.0% | |
| TTGTGTGTGTATAAAGGCTT+TGG | + | chr7.1:1637985-1638004 | MS.gene025978:CDS | 35.0% | |
| TTTCTTGAAGCAGAATGTGT+TGG | + | chr7.1:1637048-1637067 | MS.gene025978:CDS | 35.0% | |
| ! | AACTGTGATGATGATGATGA+TGG | + | chr7.1:1636695-1636714 | MS.gene025978:CDS | 35.0% |
| ! | ATGAAGAATGAAATAGCGGA+AGG | + | chr7.1:1638834-1638853 | MS.gene025978:intron | 35.0% |
| ! | CCGATGATGATAATGTAAAC+AGG | + | chr7.1:1639317-1639336 | MS.gene025978:CDS | 35.0% |
| ! | GATTTTGAATGGTATACTGG+AGG | - | chr7.1:1639428-1639447 | None:intergenic | 35.0% |
| ! | GTTGCTTTCATAGTTCTATG+TGG | + | chr7.1:1636860-1636879 | MS.gene025978:CDS | 35.0% |
| ! | TGAAGAATGAAATAGCGGAA+GGG | + | chr7.1:1638835-1638854 | MS.gene025978:intron | 35.0% |
| ! | TTTTGCAAATGCTGAAGCTT+AGG | - | chr7.1:1638326-1638345 | None:intergenic | 35.0% |
| !! | AAATTTTAAAGGAGGGACAC+CGG | + | chr7.1:1637465-1637484 | MS.gene025978:CDS | 35.0% |
| !! | AGATGATGGAAGGTAATATC+TGG | + | chr7.1:1639155-1639174 | MS.gene025978:intron | 35.0% |
| !!! | TTCATCGGGTTTTGATTGTT+TGG | + | chr7.1:1639390-1639409 | MS.gene025978:CDS | 35.0% |
| AAACCCAGGATTGAATGCAA+AGG | - | chr7.1:1637763-1637782 | None:intergenic | 40.0% | |
| AAAGAAGAGGAATCAAGGTG+GGG | - | chr7.1:1637006-1637025 | None:intergenic | 40.0% | |
| AAGAACAGATGCATGAGACA+AGG | - | chr7.1:1637608-1637627 | None:intergenic | 40.0% | |
| AAGTGCAGAAGAACGCATAA+AGG | + | chr7.1:1639552-1639571 | MS.gene025978:CDS | 40.0% | |
| ACCTATTACCATATCAGGCA+AGG | - | chr7.1:1638034-1638053 | None:intergenic | 40.0% | |
| AGACCTTTGCATTCAATCCT+GGG | + | chr7.1:1637757-1637776 | MS.gene025978:CDS | 40.0% | |
| AGAGATAAGAAAGAGCAAGG+GGG | + | chr7.1:1637339-1637358 | MS.gene025978:CDS | 40.0% | |
| AGATGCAACTAATTGCATGC+AGG | + | chr7.1:1638711-1638730 | MS.gene025978:intron | 40.0% | |
| AGCAGAATGTGTTGGAATTG+GGG | + | chr7.1:1637056-1637075 | MS.gene025978:CDS | 40.0% | |
| AGCAGCTCATACTTTGTCAA+AGG | - | chr7.1:1638434-1638453 | None:intergenic | 40.0% | |
| AGCTCATACTTTGTCAAAGG+TGG | - | chr7.1:1638431-1638450 | None:intergenic | 40.0% | |
| AGTTGCATAATTGTGCGGTT+TGG | + | chr7.1:1637212-1637231 | MS.gene025978:CDS | 40.0% | |
| ATCAAAACCCGATGAAACAG+CGG | - | chr7.1:1639386-1639405 | None:intergenic | 40.0% | |
| ATGAGGGCCATAGTAAGTAT+AGG | - | chr7.1:1636906-1636925 | None:intergenic | 40.0% | |
| ATTATGCAACTCCAAGGCTT+TGG | - | chr7.1:1637203-1637222 | None:intergenic | 40.0% | |
| CAAAAGAAGAGGAATCAAGG+TGG | - | chr7.1:1637008-1637027 | None:intergenic | 40.0% | |
| CAAAGCCTTGAGTTCGATTT+CGG | - | chr7.1:1637532-1637551 | None:intergenic | 40.0% | |
| CACAACAATGAACCTAAGGA+GGG | + | chr7.1:1638300-1638319 | MS.gene025978:CDS | 40.0% | |
| CAGGCATTTGAAGATCCAAA+AGG | - | chr7.1:1639453-1639472 | None:intergenic | 40.0% | |
| CATCATAAACAGATACGCAC+AGG | - | chr7.1:1638584-1638603 | None:intergenic | 40.0% | |
| CGTTAAGACCTCTAAACTGT+TGG | - | chr7.1:1639288-1639307 | None:intergenic | 40.0% | |
| CTCATACTTTGTCAAAGGTG+GGG | - | chr7.1:1638429-1638448 | None:intergenic | 40.0% | |
| CTTCAAATGCCTGAAATGGA+TGG | + | chr7.1:1639460-1639479 | MS.gene025978:CDS | 40.0% | |
| CTTCAGCATTTGCAAAACAC+TGG | + | chr7.1:1638329-1638348 | MS.gene025978:CDS | 40.0% | |
| CTTGGAGTTGCATAATTGTG+CGG | + | chr7.1:1637207-1637226 | MS.gene025978:CDS | 40.0% | |
| GAAACATTGAAAGCAAACCC+AGG | - | chr7.1:1637777-1637796 | None:intergenic | 40.0% | |
| GAAATTTCAGCCAACGACAA+AGG | + | chr7.1:1637889-1637908 | MS.gene025978:CDS | 40.0% | |
| GAAGCAGAATGTGTTGGAAT+TGG | + | chr7.1:1637054-1637073 | MS.gene025978:CDS | 40.0% | |
| GATGCAACTAATTGCATGCA+GGG | + | chr7.1:1638712-1638731 | MS.gene025978:intron | 40.0% | |
| GCTCATACTTTGTCAAAGGT+GGG | - | chr7.1:1638430-1638449 | None:intergenic | 40.0% | |
| GGATCTTCAAATGCCTGAAA+TGG | + | chr7.1:1639456-1639475 | MS.gene025978:CDS | 40.0% | |
| GTTCGTTAGCTATCTCATGA+AGG | - | chr7.1:1639627-1639646 | None:intergenic | 40.0% | |
| TCCTTGCCTGATATGGTAAT+AGG | + | chr7.1:1638030-1638049 | MS.gene025978:CDS | 40.0% | |
| TGAAAGTGATACCGCAGATA+AGG | + | chr7.1:1638146-1638165 | MS.gene025978:intron | 40.0% | |
| TGGATATCACCAAACTCTCT+GGG | + | chr7.1:1639175-1639194 | MS.gene025978:CDS | 40.0% | |
| TTCTTCCGAAATCGAACTCA+AGG | + | chr7.1:1637524-1637543 | MS.gene025978:CDS | 40.0% | |
| TTTCAATCAGGATCATCGCA+TGG | + | chr7.1:1639229-1639248 | MS.gene025978:CDS | 40.0% | |
| TTTGAGAAAGTGATGAGCCA+TGG | + | chr7.1:1637727-1637746 | MS.gene025978:CDS | 40.0% | |
| TTTGGAAAGCTCAACAAGTG+TGG | - | chr7.1:1637185-1637204 | None:intergenic | 40.0% | |
| ! | GAACTACATTTTACGCACAG+AGG | + | chr7.1:1638500-1638519 | MS.gene025978:intron | 40.0% |
| ! | TCAAGTAACCGCTGTTTCAT+CGG | + | chr7.1:1639375-1639394 | MS.gene025978:CDS | 40.0% |
| !! | ATGAAGTATCGGCATACGAA+TGG | - | chr7.1:1637440-1637459 | None:intergenic | 40.0% |
| !!! | TGGATGGTTTTGAAGTTGCA+AGG | + | chr7.1:1639476-1639495 | MS.gene025978:CDS | 40.0% |
| AAAAAGACTCAGCCTGTGCT+TGG | + | chr7.1:1638923-1638942 | MS.gene025978:intron | 45.0% | |
| AAGAAGCTGCTTGAGAAGCT+GGG | + | chr7.1:1639349-1639368 | MS.gene025978:CDS | 45.0% | |
| AAGTGATGAGCCATGGAATG+AGG | + | chr7.1:1637734-1637753 | MS.gene025978:CDS | 45.0% | |
| AGAAACAGAAGGAGGCTAGT+TGG | + | chr7.1:1637098-1637117 | MS.gene025978:CDS | 45.0% | |
| AGCTGCACGTTTAGTGAGAA+GGG | + | chr7.1:1638966-1638985 | MS.gene025978:intron | 45.0% | |
| ATCACCAAACTCTCTGGGTT+TGG | + | chr7.1:1639180-1639199 | MS.gene025978:CDS | 45.0% | |
| ATCACCCTTCTATCCTCATC+AGG | - | chr7.1:1637241-1637260 | None:intergenic | 45.0% | |
| ATCCATTCATTCCCACCTGT+AGG | - | chr7.1:1639585-1639604 | None:intergenic | 45.0% | |
| CAAAGACTTCCTAATCTCGC+GGG | - | chr7.1:1637140-1637159 | None:intergenic | 45.0% | |
| CACTATCTCCATCTCATGGT+GGG | - | chr7.1:1637557-1637576 | None:intergenic | 45.0% | |
| CATAAAGGAGAGATGCCTAC+AGG | + | chr7.1:1639567-1639586 | MS.gene025978:CDS | 45.0% | |
| CATTTGCAAAACACTGGTGC+AGG | + | chr7.1:1638335-1638354 | MS.gene025978:CDS | 45.0% | |
| CCAAAGACTTCCTAATCTCG+CGG | - | chr7.1:1637141-1637160 | None:intergenic | 45.0% | |
| CCACAACAATGAACCTAAGG+AGG | + | chr7.1:1638299-1638318 | MS.gene025978:CDS | 45.0% | |
| CCATCTACATTCCACGATGA+GGG | + | chr7.1:1637939-1637958 | MS.gene025978:CDS | 45.0% | |
| CCTCCTTAGGTTCATTGTTG+TGG | - | chr7.1:1638302-1638321 | None:intergenic | 45.0% | |
| CGAAATCGAACTCAAGGCTT+TGG | + | chr7.1:1637530-1637549 | MS.gene025978:CDS | 45.0% | |
| CGCACAATTATGCAACTCCA+AGG | - | chr7.1:1637209-1637228 | None:intergenic | 45.0% | |
| CGTTAGCTATCTCATGAAGG+AGG | - | chr7.1:1639624-1639643 | None:intergenic | 45.0% | |
| CTGGAAACTTCCTTTGTCGT+TGG | - | chr7.1:1637902-1637921 | None:intergenic | 45.0% | |
| CTGGATATCACCAAACTCTC+TGG | + | chr7.1:1639174-1639193 | MS.gene025978:CDS | 45.0% | |
| GAGACCTTTGCATTCAATCC+TGG | + | chr7.1:1637756-1637775 | MS.gene025978:CDS | 45.0% | |
| GAGCTATGAAAACTCTTCGC+CGG | - | chr7.1:1637292-1637311 | None:intergenic | 45.0% | |
| GATGCCTGATGAGGATAGAA+GGG | + | chr7.1:1637234-1637253 | MS.gene025978:CDS | 45.0% | |
| GCACCACAACAATGAACCTA+AGG | + | chr7.1:1638296-1638315 | MS.gene025978:CDS | 45.0% | |
| GCTATCTCATGAAGGAGGAT+AGG | - | chr7.1:1639619-1639638 | None:intergenic | 45.0% | |
| GGAAGTTCCAAAGCCGAAAT+TGG | + | chr7.1:1639506-1639525 | MS.gene025978:CDS | 45.0% | |
| GGGAACTAGTACCAGTTATC+TGG | - | chr7.1:1638239-1638258 | None:intergenic | 45.0% | |
| GGTACTAGTTCCCATTCAGA+TGG | + | chr7.1:1638246-1638265 | MS.gene025978:CDS | 45.0% | |
| GTAAAGTAGCTCAAGGGGTA+TGG | - | chr7.1:1636792-1636811 | None:intergenic | 45.0% | |
| TAAGAAGCTGCTTGAGAAGC+TGG | + | chr7.1:1639348-1639367 | MS.gene025978:CDS | 45.0% | |
| TCAAAGGCCAATTTCGGCTT+TGG | - | chr7.1:1639516-1639535 | None:intergenic | 45.0% | |
| TCCATCTACATTCCACGATG+AGG | + | chr7.1:1637938-1637957 | MS.gene025978:CDS | 45.0% | |
| TGAAAACTCTTCGCCGGATT+CGG | - | chr7.1:1637286-1637305 | None:intergenic | 45.0% | |
| TGCAGTGGCACATGAAACAA+GGG | - | chr7.1:1636975-1636994 | None:intergenic | 45.0% | |
| TGGTAATAGGTGATGAGGCA+AGG | + | chr7.1:1638043-1638062 | MS.gene025978:CDS | 45.0% | |
| TGTTGAGCTTTCCAAAGCCT+TGG | + | chr7.1:1637189-1637208 | MS.gene025978:CDS | 45.0% | |
| TTGCAGTGGCACATGAAACA+AGG | - | chr7.1:1636976-1636995 | None:intergenic | 45.0% | |
| ! | CAAGTAACCGCTGTTTCATC+GGG | + | chr7.1:1639376-1639395 | MS.gene025978:CDS | 45.0% |
| ! | GGCACAAAAGCATGCAATGA+TGG | + | chr7.1:1637684-1637703 | MS.gene025978:CDS | 45.0% |
| ! | TCATGAGTTGAAGCCGAATC+CGG | + | chr7.1:1637270-1637289 | MS.gene025978:CDS | 45.0% |
| AAAGGAGAGATGCCTACAGG+TGG | + | chr7.1:1639570-1639589 | MS.gene025978:CDS | 50.0% | |
| AACTCTCTGGGTTTGGCACA+AGG | + | chr7.1:1639187-1639206 | MS.gene025978:CDS | 50.0% | |
| AAGGAGAGATGCCTACAGGT+GGG | + | chr7.1:1639571-1639590 | MS.gene025978:CDS | 50.0% | |
| ACTCTCTGGGTTTGGCACAA+GGG | + | chr7.1:1639188-1639207 | MS.gene025978:CDS | 50.0% | |
| ACTTTGTCAAAGGTGGGGAG+AGG | - | chr7.1:1638424-1638443 | None:intergenic | 50.0% | |
| CACATGAAACAAGGGCAGTG+AGG | - | chr7.1:1636967-1636986 | None:intergenic | 50.0% | |
| CAGCTGCACGTTTAGTGAGA+AGG | + | chr7.1:1638965-1638984 | MS.gene025978:intron | 50.0% | |
| CCACCATGAGATGGAGATAG+TGG | + | chr7.1:1637555-1637574 | MS.gene025978:CDS | 50.0% | |
| CCACTATCTCCATCTCATGG+TGG | - | chr7.1:1637558-1637577 | None:intergenic | 50.0% | |
| CCCTCATCGTGGAATGTAGA+TGG | - | chr7.1:1637942-1637961 | None:intergenic | 50.0% | |
| CCGCGAGATTAGGAAGTCTT+TGG | + | chr7.1:1637138-1637157 | MS.gene025978:CDS | 50.0% | |
| CCTCCACTATCTCCATCTCA+TGG | - | chr7.1:1637561-1637580 | None:intergenic | 50.0% | |
| CTGCGAGTAGTGGTGAATCT+GGG | + | chr7.1:1637395-1637414 | MS.gene025978:CDS | 50.0% | |
| GCAAAGGTCTCCTCATTCCA+TGG | - | chr7.1:1637747-1637766 | None:intergenic | 50.0% | |
| GCAGAGATCCTTGCCTGATA+TGG | + | chr7.1:1638023-1638042 | MS.gene025978:CDS | 50.0% | |
| GGATGCCTGATGAGGATAGA+AGG | + | chr7.1:1637233-1637252 | MS.gene025978:CDS | 50.0% | |
| GGTGGGGAAAGTAATTGCAG+TGG | - | chr7.1:1636990-1637009 | None:intergenic | 50.0% | |
| TACGCACAGAGGATGACTCT+TGG | + | chr7.1:1638511-1638530 | MS.gene025978:intron | 50.0% | |
| TCTCAAATGAGCTCCTTGCC+TGG | - | chr7.1:1637714-1637733 | None:intergenic | 50.0% | |
| TGCCTACAGGTGGGAATGAA+TGG | + | chr7.1:1639580-1639599 | MS.gene025978:CDS | 50.0% | |
| TGCGAGTAGTGGTGAATCTG+GGG | + | chr7.1:1637396-1637415 | MS.gene025978:CDS | 50.0% | |
| TGGAATTGGGGCAAGAGGTT+GGG | + | chr7.1:1637068-1637087 | MS.gene025978:CDS | 50.0% | |
| TGTGCCAAACCCAGAGAGTT+TGG | - | chr7.1:1639187-1639206 | None:intergenic | 50.0% | |
| TGTGTTGGAATTGGGGCAAG+AGG | + | chr7.1:1637063-1637082 | MS.gene025978:CDS | 50.0% | |
| TTGAGGCCTGATTCTGCACT+CGG | + | chr7.1:1637370-1637389 | MS.gene025978:CDS | 50.0% | |
| TTGGAATTGGGGCAAGAGGT+TGG | + | chr7.1:1637067-1637086 | MS.gene025978:CDS | 50.0% | |
| ! | ACGTTTAGTGAGAAGGGCAC+TGG | + | chr7.1:1638972-1638991 | MS.gene025978:intron | 50.0% |
| ! | ACTTTTCACCTGCACGTAGC+AGG | - | chr7.1:1639660-1639679 | None:intergenic | 50.0% |
| ! | AGGAGGCTAGTTGGCATGTT+AGG | + | chr7.1:1637107-1637126 | MS.gene025978:CDS | 50.0% |
| ! | CCATGAGATGGAGATAGTGG+AGG | + | chr7.1:1637558-1637577 | MS.gene025978:CDS | 50.0% |
| !! | CGTTTAGTGAGAAGGGCACT+GGG | + | chr7.1:1638973-1638992 | MS.gene025978:intron | 50.0% |
| AAATGAGCTCCTTGCCTGGC+TGG | - | chr7.1:1637710-1637729 | None:intergenic | 55.0% | |
| ACGAATGGCTGCTACAGCAC+CGG | - | chr7.1:1637425-1637444 | None:intergenic | 55.0% | |
| ACTACCGCTAGACCAAGCAC+AGG | - | chr7.1:1638938-1638957 | None:intergenic | 55.0% | |
| AGAACAGTCCTGCTACGTGC+AGG | + | chr7.1:1639649-1639668 | MS.gene025978:CDS | 55.0% | |
| AGTGGAGGTAGTTGCTGACC+AGG | + | chr7.1:1637573-1637592 | MS.gene025978:CDS | 55.0% | |
| AGTGGTGAATCTGGGGACTC+CGG | + | chr7.1:1637403-1637422 | MS.gene025978:CDS | 55.0% | |
| AGTTGCTGACCAGGTTGCTG+TGG | + | chr7.1:1637582-1637601 | MS.gene025978:CDS | 55.0% | |
| CTGAAGCTTAGGCCCTCCTT+AGG | - | chr7.1:1638315-1638334 | None:intergenic | 55.0% | |
| GCAAGAAGCTTCCCTCATCG+TGG | - | chr7.1:1637953-1637972 | None:intergenic | 55.0% | |
| GCTGCGAGTAGTGGTGAATC+TGG | + | chr7.1:1637394-1637413 | MS.gene025978:CDS | 55.0% | |
| GGATGTTGACCCGCGAGATT+AGG | + | chr7.1:1637128-1637147 | MS.gene025978:CDS | 55.0% | |
| TCAGCCTGTGCTTGGTCTAG+CGG | + | chr7.1:1638931-1638950 | MS.gene025978:intron | 55.0% | |
| TTTGTGCCTGTTGCAACGCC+CGG | - | chr7.1:1637672-1637691 | None:intergenic | 55.0% | |
| ! | GCTTTGGACCCACCATGAGA+TGG | + | chr7.1:1637546-1637565 | MS.gene025978:CDS | 55.0% |
| ! | TGCGGTTTGGATGCCTGATG+AGG | + | chr7.1:1637225-1637244 | MS.gene025978:CDS | 55.0% |
| !!! | GCAAGGGGGTGTCGATTTTG+AGG | + | chr7.1:1637353-1637372 | MS.gene025978:CDS | 55.0% |
| CAATGATGGCCAGCCAGGCA+AGG | + | chr7.1:1637698-1637717 | MS.gene025978:CDS | 60.0% | |
| GAGACAAGGCCACAGCAACC+TGG | - | chr7.1:1637594-1637613 | None:intergenic | 60.0% | |
| GCAGCTCCGAGTGCAGAATC+AGG | - | chr7.1:1637379-1637398 | None:intergenic | 60.0% | |
| GCATGCAATGATGGCCAGCC+AGG | + | chr7.1:1637693-1637712 | MS.gene025978:CDS | 60.0% | |
| ! | GCAAAACCGGGCGTTGCAAC+AGG | + | chr7.1:1637663-1637682 | MS.gene025978:CDS | 60.0% |
| GCACTCGGAGCTGCGAGTAG+TGG | + | chr7.1:1637385-1637404 | MS.gene025978:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 1636666 | 1639684 | 1636666 | ID=MS.gene025978 |
| chr7.1 | mRNA | 1636666 | 1639684 | 1636666 | ID=MS.gene025978.t1;Parent=MS.gene025978 |
| chr7.1 | exon | 1636666 | 1636742 | 1636666 | ID=MS.gene025978.t1.exon1;Parent=MS.gene025978.t1 |
| chr7.1 | CDS | 1636666 | 1636742 | 1636666 | ID=cds.MS.gene025978.t1;Parent=MS.gene025978.t1 |
| chr7.1 | exon | 1636820 | 1638064 | 1636820 | ID=MS.gene025978.t1.exon2;Parent=MS.gene025978.t1 |
| chr7.1 | CDS | 1636820 | 1638064 | 1636820 | ID=cds.MS.gene025978.t1;Parent=MS.gene025978.t1 |
| chr7.1 | exon | 1638152 | 1638356 | 1638152 | ID=MS.gene025978.t1.exon3;Parent=MS.gene025978.t1 |
| chr7.1 | CDS | 1638152 | 1638356 | 1638152 | ID=cds.MS.gene025978.t1;Parent=MS.gene025978.t1 |
| chr7.1 | exon | 1639157 | 1639684 | 1639157 | ID=MS.gene025978.t1.exon4;Parent=MS.gene025978.t1 |
| chr7.1 | CDS | 1639157 | 1639684 | 1639157 | ID=cds.MS.gene025978.t1;Parent=MS.gene025978.t1 |
| Gene Sequence |
| Protein sequence |
