Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050576.t1 | XP_003626476.1 | 93.6 | 689 | 13 | 2 | 27 | 684 | 77 | 765 | 0.00E+00 | 1219.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050576.t1 | Q9ZTP3 | 55.3 | 700 | 268 | 6 | 27 | 682 | 68 | 766 | 3.7e-200 | 699.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050576.t1 | G7L2X0 | 93.6 | 689 | 13 | 2 | 27 | 684 | 77 | 765 | 0.0e+00 | 1219.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene050576.t1 | TR | Others |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050576 | MS.gene22870 | 0.98049 | 2.44E-150 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene050576 | MS.gene90940 | PPI |
| MS.gene050576 | MS.gene90941 | PPI |
| MS.gene050576 | MS.gene013718 | PPI |
| MS.gene004757 | MS.gene050576 | PPI |
| MS.gene050576 | MS.gene65517 | PPI |
| MS.gene050576 | MS.gene048847 | PPI |
| MS.gene32142 | MS.gene050576 | PPI |
| MS.gene050576 | MS.gene053421 | PPI |
| MS.gene050576 | MS.gene048849 | PPI |
| MS.gene073869 | MS.gene050576 | PPI |
| MS.gene050576 | MS.gene02623 | PPI |
| MS.gene048850 | MS.gene050576 | PPI |
| MS.gene050576 | MS.gene55723 | PPI |
| MS.gene050576 | MS.gene052918 | PPI |
| MS.gene050576 | MS.gene51452 | PPI |
| MS.gene02513 | MS.gene050576 | PPI |
| MS.gene050576 | MS.gene030357 | PPI |
| MS.gene050576 | MS.gene048846 | PPI |
| MS.gene050576 | MS.gene63969 | PPI |
| MS.gene050576 | MS.gene048848 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050576.t1 | MTR_7g116330 | 93.614 | 689 | 13 | 2 | 27 | 684 | 77 | 765 | 0.0 | 1310 |
| MS.gene050576.t1 | MTR_1g079790 | 69.841 | 693 | 172 | 6 | 28 | 684 | 71 | 762 | 0.0 | 951 |
| MS.gene050576.t1 | MTR_1g073840 | 55.667 | 697 | 267 | 7 | 21 | 680 | 66 | 757 | 0.0 | 771 |
| MS.gene050576.t1 | MTR_1g044210 | 51.289 | 698 | 294 | 9 | 21 | 677 | 65 | 757 | 0.0 | 701 |
| MS.gene050576.t1 | MTR_1g079790 | 70.019 | 517 | 119 | 5 | 28 | 509 | 71 | 586 | 0.0 | 696 |
| MS.gene050576.t1 | MTR_4g031150 | 37.073 | 731 | 392 | 14 | 3 | 679 | 67 | 783 | 1.11e-140 | 431 |
| MS.gene050576.t1 | MTR_7g109150 | 35.526 | 608 | 299 | 14 | 8 | 554 | 23 | 598 | 2.94e-91 | 297 |
| MS.gene050576.t1 | MTR_4g134880 | 53.425 | 73 | 33 | 1 | 609 | 680 | 1 | 73 | 5.33e-20 | 85.1 |
| MS.gene050576.t1 | MTR_8g080770 | 33.562 | 146 | 84 | 4 | 547 | 680 | 717 | 861 | 1.43e-17 | 87.8 |
| MS.gene050576.t1 | MTR_8g080770 | 33.562 | 146 | 84 | 4 | 547 | 680 | 826 | 970 | 1.56e-17 | 87.8 |
| MS.gene050576.t1 | MTR_3g085130 | 36.508 | 126 | 68 | 4 | 557 | 673 | 695 | 817 | 1.47e-15 | 81.3 |
| MS.gene050576.t1 | MTR_3g085130 | 36.508 | 126 | 68 | 4 | 557 | 673 | 905 | 1027 | 2.39e-15 | 80.5 |
| MS.gene050576.t1 | MTR_8g075340 | 35.878 | 131 | 64 | 4 | 553 | 664 | 1024 | 1153 | 2.10e-13 | 74.3 |
| MS.gene050576.t1 | MTR_5g097410 | 34.127 | 126 | 58 | 4 | 560 | 663 | 1076 | 1198 | 4.94e-12 | 70.1 |
| MS.gene050576.t1 | MTR_8g106150 | 33.600 | 125 | 63 | 3 | 557 | 664 | 617 | 738 | 1.46e-11 | 68.2 |
| MS.gene050576.t1 | MTR_8g106150 | 33.600 | 125 | 63 | 3 | 557 | 664 | 860 | 981 | 1.57e-11 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050576.t1 | AT3G04580 | 59.317 | 703 | 235 | 6 | 27 | 682 | 68 | 766 | 0.0 | 805 |
| MS.gene050576.t1 | AT3G04580 | 59.317 | 703 | 235 | 6 | 27 | 682 | 68 | 766 | 0.0 | 805 |
| MS.gene050576.t1 | AT3G23150 | 49.861 | 718 | 288 | 14 | 21 | 682 | 70 | 771 | 0.0 | 622 |
| MS.gene050576.t1 | AT3G23150 | 58.531 | 422 | 159 | 7 | 21 | 439 | 70 | 478 | 9.96e-154 | 458 |
| MS.gene050576.t1 | AT1G66340 | 37.449 | 729 | 386 | 15 | 3 | 677 | 17 | 729 | 1.86e-141 | 431 |
| MS.gene050576.t1 | AT1G04310 | 42.962 | 547 | 260 | 8 | 31 | 535 | 82 | 618 | 1.01e-135 | 413 |
| MS.gene050576.t1 | AT1G04310 | 42.962 | 547 | 260 | 8 | 31 | 535 | 82 | 618 | 1.01e-135 | 413 |
| MS.gene050576.t1 | AT2G40940 | 36.000 | 575 | 321 | 12 | 8 | 541 | 22 | 590 | 1.24e-94 | 305 |
| MS.gene050576.t1 | AT5G35750 | 34.228 | 149 | 68 | 4 | 543 | 663 | 1013 | 1159 | 1.50e-13 | 75.1 |
| MS.gene050576.t1 | AT2G01830 | 36.752 | 117 | 61 | 4 | 557 | 663 | 933 | 1046 | 2.53e-13 | 74.3 |
| MS.gene050576.t1 | AT2G01830 | 36.752 | 117 | 61 | 4 | 557 | 663 | 944 | 1057 | 2.56e-13 | 74.3 |
| MS.gene050576.t1 | AT2G01830 | 36.752 | 117 | 61 | 4 | 557 | 663 | 921 | 1034 | 2.65e-13 | 74.3 |
| MS.gene050576.t1 | AT2G01830 | 36.752 | 117 | 61 | 4 | 557 | 663 | 921 | 1034 | 2.65e-13 | 74.3 |
| MS.gene050576.t1 | AT2G01830 | 36.752 | 117 | 61 | 4 | 557 | 663 | 921 | 1034 | 2.65e-13 | 74.3 |
| MS.gene050576.t1 | AT2G01830 | 36.752 | 117 | 61 | 4 | 557 | 663 | 921 | 1034 | 2.65e-13 | 74.3 |
| MS.gene050576.t1 | AT1G27320 | 29.927 | 137 | 75 | 3 | 557 | 673 | 889 | 1024 | 3.23e-13 | 73.9 |
| MS.gene050576.t1 | AT1G27320 | 27.273 | 154 | 112 | 0 | 285 | 438 | 410 | 563 | 3.47e-11 | 67.4 |
Find 168 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCAATGTTCCATTTAAAT+TGG | 0.194829 | 7.3:+1756088 | MS.gene050576:CDS |
| TGAAGGAATACCAATTTAAA+TGG | 0.204373 | 7.3:-1756098 | None:intergenic |
| CTCTATTTCTGTAAATGATT+TGG | 0.214081 | 7.3:+1756574 | MS.gene050576:CDS |
| TTGGAGTGTACAAAGTATTT+TGG | 0.234119 | 7.3:+1755986 | MS.gene050576:CDS |
| AAGTATAGGCATTGAGTAAA+TGG | 0.235188 | 7.3:-1756154 | None:intergenic |
| ACCATTCAAAATCATCCTTT+TGG | 0.252407 | 7.3:+1758700 | MS.gene050576:CDS |
| CTCAATGCCTATACTTACTA+TGG | 0.275621 | 7.3:+1756161 | MS.gene050576:CDS |
| ACTTCAAAACCATCCATTTC+AGG | 0.281316 | 7.3:-1758734 | None:intergenic |
| GGAAGTTCCAAAGCCGAAAT+TGG | 0.286448 | 7.3:+1758771 | MS.gene050576:CDS |
| CTACTAGCACTATTTAAAAT+TGG | 0.299995 | 7.3:-1757535 | None:intergenic |
| ATCTTATGCTATACTAGTTT+TGG | 0.300114 | 7.3:+1756766 | MS.gene050576:CDS |
| CAAAGCCTTGAGTTCGATTT+CGG | 0.313490 | 7.3:-1756794 | None:intergenic |
| CCGCGAGATTAGGAAGTCTT+TGG | 0.313919 | 7.3:+1756403 | MS.gene050576:CDS |
| TCAAAGGCCAATTTCGGCTT+TGG | 0.315320 | 7.3:-1758778 | None:intergenic |
| GGAAATGTTTCAACTCTAAC+TGG | 0.322814 | 7.3:-1757183 | None:intergenic |
| TGAAAACTCTTCGCCGGATT+CGG | 0.327965 | 7.3:-1756548 | None:intergenic |
| CTTCTTCTCAAGTTTCAATC+AGG | 0.328501 | 7.3:+1758482 | MS.gene050576:CDS |
| GATAAGGATGATAGAAGTTC+TGG | 0.333479 | 7.3:+1757427 | MS.gene050576:CDS |
| AAGTTTAATTTCCAGATAAC+TGG | 0.338812 | 7.3:+1757490 | MS.gene050576:CDS |
| GGGAACTAGTACCAGTTATC+TGG | 0.355067 | 7.3:-1757501 | None:intergenic |
| CGAAATCGAACTCAAGGCTT+TGG | 0.361339 | 7.3:+1756795 | MS.gene050576:CDS |
| TGTGCCAAACCCAGAGAGTT+TGG | 0.362144 | 7.3:-1758449 | None:intergenic |
| AGGAGGCTAGTTGGCATGTT+AGG | 0.362594 | 7.3:+1756372 | MS.gene050576:CDS |
| CAATAATCAAAGGCCAATTT+CGG | 0.365522 | 7.3:-1758784 | None:intergenic |
| CTGGATATCACCAAACTCTC+TGG | 0.365884 | 7.3:+1758439 | MS.gene050576:CDS |
| GGATCTTCAAATGCCTGAAA+TGG | 0.366381 | 7.3:+1758721 | MS.gene050576:CDS |
| TCATCACCTATTACCATATC+AGG | 0.368786 | 7.3:-1757301 | None:intergenic |
| TGGAATTGGGGCAAGAGGTT+GGG | 0.375142 | 7.3:+1756333 | MS.gene050576:CDS |
| TTGGAATTGGGGCAAGAGGT+TGG | 0.382688 | 7.3:+1756332 | MS.gene050576:CDS |
| TAAGAAGCTGCTTGAGAAGC+TGG | 0.383208 | 7.3:+1758613 | MS.gene050576:CDS |
| GCAGAGATCCTTGCCTGATA+TGG | 0.386198 | 7.3:+1757288 | MS.gene050576:CDS |
| GCTGCGAGTAGTGGTGAATC+TGG | 0.386274 | 7.3:+1756659 | MS.gene050576:CDS |
| GCAAAACCGGGCGTTGCAAC+AGG | 0.388211 | 7.3:+1756928 | MS.gene050576:CDS |
| GAAGCAGAATGTGTTGGAAT+TGG | 0.390130 | 7.3:+1756319 | MS.gene050576:CDS |
| AGAAACTTAAAGAGCAAAAC+CGG | 0.390137 | 7.3:+1756915 | MS.gene050576:CDS |
| CCCTCATCGTGGAATGTAGA+TGG | 0.392008 | 7.3:-1757204 | None:intergenic |
| GAGACCTTTGCATTCAATCC+TGG | 0.400066 | 7.3:+1757021 | MS.gene050576:CDS |
| AAATGAGCTCCTTGCCTGGC+TGG | 0.400987 | 7.3:-1756972 | None:intergenic |
| AAGCAGAATGTGTTGGAATT+GGG | 0.402075 | 7.3:+1756320 | MS.gene050576:CDS |
| AAGTGTTTGTGTGTGTATAA+AGG | 0.402755 | 7.3:+1757244 | MS.gene050576:CDS |
| TTAAAATTGGTCCATCTGAA+TGG | 0.402769 | 7.3:-1757522 | None:intergenic |
| TCCTTGCCTGATATGGTAAT+AGG | 0.403180 | 7.3:+1757295 | MS.gene050576:CDS |
| ATTATGCAACTCCAAGGCTT+TGG | 0.407308 | 7.3:-1756465 | None:intergenic |
| GGATGTTGACCCGCGAGATT+AGG | 0.409855 | 7.3:+1756393 | MS.gene050576:CDS |
| CCTCCTTAGGTTCATTGTTG+TGG | 0.420175 | 7.3:-1757564 | None:intergenic |
| GCAGCTCCGAGTGCAGAATC+AGG | 0.421232 | 7.3:-1756641 | None:intergenic |
| CAAGTAACCGCTGTTTCATC+GGG | 0.427661 | 7.3:+1758641 | MS.gene050576:CDS |
| GCATGCAATGATGGCCAGCC+AGG | 0.428498 | 7.3:+1756958 | MS.gene050576:CDS |
| TGTTGAGCTTTCCAAAGCCT+TGG | 0.429033 | 7.3:+1756454 | MS.gene050576:CDS |
| AAGTGCAGAAGAACGCATAA+AGG | 0.432930 | 7.3:+1758817 | MS.gene050576:CDS |
| TGCCTACAGGTGGGAATGAA+TGG | 0.434232 | 7.3:+1758845 | MS.gene050576:CDS |
| AGATGATGGAAGGTAATATC+TGG | 0.435995 | 7.3:+1758420 | MS.gene050576:intron |
| TCTCAAATGAGCTCCTTGCC+TGG | 0.436435 | 7.3:-1756976 | None:intergenic |
| TTGTGTGTGTATAAAGGCTT+TGG | 0.437175 | 7.3:+1757250 | MS.gene050576:CDS |
| GGCACAAAAGCATGCAATGA+TGG | 0.437900 | 7.3:+1756949 | MS.gene050576:CDS |
| TCAAGTAACCGCTGTTTCAT+CGG | 0.439160 | 7.3:+1758640 | MS.gene050576:CDS |
| ATATCTGTTTATGGGATTGA+TGG | 0.441688 | 7.3:+1755921 | None:intergenic |
| ATCACCAAACTCTCTGGGTT+TGG | 0.443024 | 7.3:+1758445 | MS.gene050576:CDS |
| CTGAAGCTTAGGCCCTCCTT+AGG | 0.443209 | 7.3:-1757577 | None:intergenic |
| TAAAATTGGTCCATCTGAAT+GGG | 0.443946 | 7.3:-1757521 | None:intergenic |
| AGTTGCATAATTGTGCGGTT+TGG | 0.452705 | 7.3:+1756477 | MS.gene050576:CDS |
| TCATGAGTTGAAGCCGAATC+CGG | 0.456399 | 7.3:+1756535 | MS.gene050576:CDS |
| CCACCATGAGATGGAGATAG+TGG | 0.458301 | 7.3:+1756820 | MS.gene050576:CDS |
| AGACCTTTGCATTCAATCCT+GGG | 0.459059 | 7.3:+1757022 | MS.gene050576:CDS |
| TTGAAGTTGCAAGGAAGATT+CGG | 0.459346 | 7.3:+1758750 | MS.gene050576:CDS |
| CCGATGATGATAATGTAAAC+AGG | 0.466113 | 7.3:+1758582 | MS.gene050576:CDS |
| GGATGCCTGATGAGGATAGA+AGG | 0.466923 | 7.3:+1756498 | MS.gene050576:CDS |
| CACTATCTCCATCTCATGGT+GGG | 0.473097 | 7.3:-1756819 | None:intergenic |
| TTTCAAAAGAAGAGGAATCA+AGG | 0.474095 | 7.3:-1756273 | None:intergenic |
| TTGAGGCCTGATTCTGCACT+CGG | 0.474787 | 7.3:+1756635 | MS.gene050576:CDS |
| CTGCGAGTAGTGGTGAATCT+GGG | 0.475786 | 7.3:+1756660 | MS.gene050576:CDS |
| CTGGAAACTTCCTTTGTCGT+TGG | 0.475889 | 7.3:-1757164 | None:intergenic |
| GTTAGAGATAAGAAAGAGCA+AGG | 0.479184 | 7.3:+1756601 | MS.gene050576:CDS |
| TGAAAGTGATACCGCAGATA+AGG | 0.485783 | 7.3:+1757411 | MS.gene050576:intron |
| CAGGCATTTGAAGATCCAAA+AGG | 0.486141 | 7.3:-1758715 | None:intergenic |
| AACTCTCTGGGTTTGGCACA+AGG | 0.491639 | 7.3:+1758452 | MS.gene050576:CDS |
| ATCACCCTTCTATCCTCATC+AGG | 0.491816 | 7.3:-1756503 | None:intergenic |
| TTTGTGCCTGTTGCAACGCC+CGG | 0.496643 | 7.3:-1756934 | None:intergenic |
| AAATTTGAAACATGAAGTAT+CGG | 0.504455 | 7.3:-1756713 | None:intergenic |
| TTCTTCCGAAATCGAACTCA+AGG | 0.505225 | 7.3:+1756789 | MS.gene050576:CDS |
| GCGTTTGATAAATGATGTAA+TGG | 0.505741 | 7.3:+1757132 | MS.gene050576:CDS |
| CTATGAAAGCAACAAATTGA+AGG | 0.510314 | 7.3:-1756115 | None:intergenic |
| CGTTAAGACCTCTAAACTGT+TGG | 0.510727 | 7.3:-1758550 | None:intergenic |
| GTTGCTTTCATAGTTCTATG+TGG | 0.512396 | 7.3:+1756125 | MS.gene050576:CDS |
| AGTATAGGCATTGAGTAAAT+GGG | 0.513040 | 7.3:-1756153 | None:intergenic |
| ATGAGGGCCATAGTAAGTAT+AGG | 0.515615 | 7.3:-1756168 | None:intergenic |
| TACCAATTTAAATGGAACAT+TGG | 0.516471 | 7.3:-1756090 | None:intergenic |
| CCTGTTTACATTATCATCAT+CGG | 0.516759 | 7.3:-1758582 | None:intergenic |
| AGAAACAATTGAAAGGAATG+AGG | 0.527304 | 7.3:-1756185 | None:intergenic |
| GCTATCTCATGAAGGAGGAT+AGG | 0.531373 | 7.3:-1758881 | None:intergenic |
| CATAAAGGAGAGATGCCTAC+AGG | 0.532003 | 7.3:+1758832 | MS.gene050576:CDS |
| CTTCAAATGCCTGAAATGGA+TGG | 0.537656 | 7.3:+1758725 | MS.gene050576:CDS |
| TTTCTTGAAGCAGAATGTGT+TGG | 0.539138 | 7.3:+1756313 | MS.gene050576:CDS |
| CATTTGCAAAACACTGGTGC+AGG | 0.542360 | 7.3:+1757600 | MS.gene050576:CDS |
| CAATGATGGCCAGCCAGGCA+AGG | 0.543126 | 7.3:+1756963 | MS.gene050576:CDS |
| AGAAACAGAAGGAGGCTAGT+TGG | 0.551296 | 7.3:+1756363 | MS.gene050576:CDS |
| GAGCTATGAAAACTCTTCGC+CGG | 0.551463 | 7.3:-1756554 | None:intergenic |
| AAAAGAAGAGGAATCAAGGT+GGG | 0.554060 | 7.3:-1756269 | None:intergenic |
| TTGCAGTGGCACATGAAACA+AGG | 0.555378 | 7.3:-1756238 | None:intergenic |
| TTAGAGATAAGAAAGAGCAA+GGG | 0.559027 | 7.3:+1756602 | MS.gene050576:CDS |
| GCAAAGGTCTCCTCATTCCA+TGG | 0.564414 | 7.3:-1757009 | None:intergenic |
| AAGTGATGAGCCATGGAATG+AGG | 0.565260 | 7.3:+1756999 | MS.gene050576:CDS |
| CCATCTACATTCCACGATGA+GGG | 0.566420 | 7.3:+1757204 | MS.gene050576:CDS |
| CCACAACAATGAACCTAAGG+AGG | 0.566649 | 7.3:+1757564 | MS.gene050576:CDS |
| ACGAATGGCTGCTACAGCAC+CGG | 0.566933 | 7.3:-1756687 | None:intergenic |
| AGTTGCTGACCAGGTTGCTG+TGG | 0.568847 | 7.3:+1756847 | MS.gene050576:CDS |
| CCACTATCTCCATCTCATGG+TGG | 0.569247 | 7.3:-1756820 | None:intergenic |
| TTTGCTTTCAATGTTTCAAG+AGG | 0.570011 | 7.3:+1757045 | MS.gene050576:CDS |
| AGTGGAGGTAGTTGCTGACC+AGG | 0.570687 | 7.3:+1756838 | MS.gene050576:CDS |
| TGGATATCACCAAACTCTCT+GGG | 0.571039 | 7.3:+1758440 | MS.gene050576:CDS |
| GAAACAATTGAAAGGAATGA+GGG | 0.573404 | 7.3:-1756184 | None:intergenic |
| AAGAAGCTGCTTGAGAAGCT+GGG | 0.574319 | 7.3:+1758614 | MS.gene050576:CDS |
| AGAACAGTCCTGCTACGTGC+AGG | 0.575168 | 7.3:+1758914 | MS.gene050576:CDS |
| GCACCACAACAATGAACCTA+AGG | 0.576436 | 7.3:+1757561 | MS.gene050576:CDS |
| AGTGGTGAATCTGGGGACTC+CGG | 0.577575 | 7.3:+1756668 | MS.gene050576:CDS |
| ACCTATTACCATATCAGGCA+AGG | 0.579803 | 7.3:-1757296 | None:intergenic |
| GAGAGATAGAAACAATTGAA+AGG | 0.580396 | 7.3:-1756192 | None:intergenic |
| GCACTCGGAGCTGCGAGTAG+TGG | 0.580746 | 7.3:+1756650 | MS.gene050576:CDS |
| GAAATTTCAGCCAACGACAA+AGG | 0.583389 | 7.3:+1757154 | MS.gene050576:CDS |
| TTTGAGAAAGTGATGAGCCA+TGG | 0.585455 | 7.3:+1756992 | MS.gene050576:CDS |
| GCTTTGGACCCACCATGAGA+TGG | 0.587831 | 7.3:+1756811 | MS.gene050576:CDS |
| AGCAGAATGTGTTGGAATTG+GGG | 0.589243 | 7.3:+1756321 | MS.gene050576:CDS |
| TGTGTTGGAATTGGGGCAAG+AGG | 0.591001 | 7.3:+1756328 | MS.gene050576:CDS |
| TAGAGATAAGAAAGAGCAAG+GGG | 0.591331 | 7.3:+1756603 | MS.gene050576:CDS |
| CTTCAGCATTTGCAAAACAC+TGG | 0.591426 | 7.3:+1757594 | MS.gene050576:CDS |
| CAAAGACTTCCTAATCTCGC+GGG | 0.591973 | 7.3:-1756402 | None:intergenic |
| ACTCTCTGGGTTTGGCACAA+GGG | 0.593543 | 7.3:+1758453 | MS.gene050576:CDS |
| TCCATCTACATTCCACGATG+AGG | 0.594668 | 7.3:+1757203 | MS.gene050576:CDS |
| ATGAAGTATCGGCATACGAA+TGG | 0.595708 | 7.3:-1756702 | None:intergenic |
| TGGGATTATGAAGAAACAGA+AGG | 0.598480 | 7.3:+1756352 | MS.gene050576:CDS |
| TTTAATGTACAGATGATGGA+AGG | 0.599238 | 7.3:+1758410 | MS.gene050576:intron |
| CCAAAGACTTCCTAATCTCG+CGG | 0.601574 | 7.3:-1756403 | None:intergenic |
| CTTGGAGTTGCATAATTGTG+CGG | 0.602360 | 7.3:+1756472 | MS.gene050576:CDS |
| TTTATACACACACAAACACT+TGG | 0.603367 | 7.3:-1757242 | None:intergenic |
| GCTGTAAGAGCAATAATCAA+AGG | 0.605453 | 7.3:-1758794 | None:intergenic |
| GGTACTAGTTCCCATTCAGA+TGG | 0.605734 | 7.3:+1757511 | MS.gene050576:CDS |
| GAGACAAGGCCACAGCAACC+TGG | 0.608666 | 7.3:-1756856 | None:intergenic |
| TGGTAATAGGTGATGAGGCA+AGG | 0.611503 | 7.3:+1757308 | MS.gene050576:CDS |
| GTTCGTTAGCTATCTCATGA+AGG | 0.613143 | 7.3:-1758889 | None:intergenic |
| TGCAGTGGCACATGAAACAA+GGG | 0.615264 | 7.3:-1756237 | None:intergenic |
| TGCGAGTAGTGGTGAATCTG+GGG | 0.617209 | 7.3:+1756661 | MS.gene050576:CDS |
| TAAGATGTCTCAACAAACTC+CGG | 0.617656 | 7.3:-1756749 | None:intergenic |
| CCTCCACTATCTCCATCTCA+TGG | 0.620492 | 7.3:-1756823 | None:intergenic |
| CGCACAATTATGCAACTCCA+AGG | 0.622141 | 7.3:-1756471 | None:intergenic |
| AAAGGAGAGATGCCTACAGG+TGG | 0.625741 | 7.3:+1758835 | MS.gene050576:CDS |
| AAAGAAGAGGAATCAAGGTG+GGG | 0.631154 | 7.3:-1756268 | None:intergenic |
| TTTCAATCAGGATCATCGCA+TGG | 0.633630 | 7.3:+1758494 | MS.gene050576:CDS |
| TGCGGTTTGGATGCCTGATG+AGG | 0.636065 | 7.3:+1756490 | MS.gene050576:CDS |
| AAGAACAGATGCATGAGACA+AGG | 0.644755 | 7.3:-1756870 | None:intergenic |
| AAACCCAGGATTGAATGCAA+AGG | 0.645170 | 7.3:-1757025 | None:intergenic |
| TTTGGAAAGCTCAACAAGTG+TGG | 0.647875 | 7.3:-1756447 | None:intergenic |
| CGTTAGCTATCTCATGAAGG+AGG | 0.649779 | 7.3:-1758886 | None:intergenic |
| GATGCCTGATGAGGATAGAA+GGG | 0.652796 | 7.3:+1756499 | MS.gene050576:CDS |
| GAAACATTGAAAGCAAACCC+AGG | 0.654290 | 7.3:-1757039 | None:intergenic |
| ATCAAAACCCGATGAAACAG+CGG | 0.664158 | 7.3:-1758648 | None:intergenic |
| AAGGAGAGATGCCTACAGGT+GGG | 0.666460 | 7.3:+1758836 | MS.gene050576:CDS |
| GCAAGAAGCTTCCCTCATCG+TGG | 0.667374 | 7.3:-1757215 | None:intergenic |
| TGATATGGTAATAGGTGATG+AGG | 0.667642 | 7.3:+1757303 | MS.gene050576:CDS |
| CACATGAAACAAGGGCAGTG+AGG | 0.669285 | 7.3:-1756229 | None:intergenic |
| CACAACAATGAACCTAAGGA+GGG | 0.669995 | 7.3:+1757565 | MS.gene050576:CDS |
| AGAGATAAGAAAGAGCAAGG+GGG | 0.671908 | 7.3:+1756604 | MS.gene050576:CDS |
| CCATGAGATGGAGATAGTGG+AGG | 0.673370 | 7.3:+1756823 | MS.gene050576:CDS |
| ACTTCTATCATCCTTATCTG+CGG | 0.674734 | 7.3:-1757422 | None:intergenic |
| GAAACTTAAAGAGCAAAACC+GGG | 0.674790 | 7.3:+1756916 | MS.gene050576:CDS |
| ATCCATTCATTCCCACCTGT+AGG | 0.679015 | 7.3:-1758847 | None:intergenic |
| CAAAAGAAGAGGAATCAAGG+TGG | 0.682155 | 7.3:-1756270 | None:intergenic |
| GGTGGGGAAAGTAATTGCAG+TGG | 0.686035 | 7.3:-1756252 | None:intergenic |
| GATTATGAAGAAACAGAAGG+AGG | 0.703737 | 7.3:+1756355 | MS.gene050576:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCTCTTTTTCAAATTTATA+TGG | + | chr7.3:1757629-1757648 | MS.gene050576:intron | 15.0% |
| !! | AATATTCAAAAGGTAAAAAG+TGG | - | chr7.3:1758324-1758343 | None:intergenic | 20.0% |
| !! | AATATTTAATGTACAGATGA+TGG | + | chr7.3:1758406-1758425 | MS.gene050576:intron | 20.0% |
| !! | ATCAACAAAAACTTAAACAA+AGG | - | chr7.3:1757661-1757680 | None:intergenic | 20.0% |
| !! | TATTGAACTTATATGATAGA+GGG | + | chr7.3:1757365-1757384 | MS.gene050576:intron | 20.0% |
| !! | TCTGTACATTAAATATTGTA+TGG | - | chr7.3:1758403-1758422 | None:intergenic | 20.0% |
| !! | TTATTGAACTTATATGATAG+AGG | + | chr7.3:1757364-1757383 | MS.gene050576:intron | 20.0% |
| !!! | AAATTTGAAACATGAAGTAT+CGG | - | chr7.3:1756716-1756735 | None:intergenic | 20.0% |
| !!! | ATGTTTCAAATTTTAAAGGA+GGG | + | chr7.3:1756723-1756742 | MS.gene050576:CDS | 20.0% |
| !!! | CAATTAATTTTGCATATGAT+CGG | + | chr7.3:1757337-1757356 | MS.gene050576:intron | 20.0% |
| !!! | CTATCAATAAAATTAGTTTG+TGG | + | chr7.3:1757888-1757907 | MS.gene050576:intron | 20.0% |
| !!! | CTTCATGTTTCAAATTTTAA+AGG | + | chr7.3:1756719-1756738 | MS.gene050576:CDS | 20.0% |
| ! | AACCACACTATAAATAATAC+TGG | - | chr7.3:1758015-1758034 | None:intergenic | 25.0% |
| ! | AACCAGTATTATTTATAGTG+TGG | + | chr7.3:1758010-1758029 | MS.gene050576:intron | 25.0% |
| ! | AGTATCTATTCATCACAAAT+CGG | + | chr7.3:1758053-1758072 | MS.gene050576:intron | 25.0% |
| ! | ATGAATAGATACTAAGAATG+AGG | - | chr7.3:1758046-1758065 | None:intergenic | 25.0% |
| ! | CTAAATGAAGAATGAAATAG+CGG | + | chr7.3:1758095-1758114 | MS.gene050576:intron | 25.0% |
| ! | TACCAATTTAAATGGAACAT+TGG | - | chr7.3:1756093-1756112 | None:intergenic | 25.0% |
| ! | TGAAGGAATACCAATTTAAA+TGG | - | chr7.3:1756101-1756120 | None:intergenic | 25.0% |
| ! | TTATTTATAGTGTGGTTTCT+TGG | + | chr7.3:1758018-1758037 | MS.gene050576:intron | 25.0% |
| ! | TTCACTTATTCAGATAATTG+AGG | - | chr7.3:1757822-1757841 | None:intergenic | 25.0% |
| !! | AAGTTTAATTTCCAGATAAC+TGG | + | chr7.3:1757490-1757509 | MS.gene050576:CDS | 25.0% |
| !! | CAATTTTAAATAGTGCTAGT+AGG | + | chr7.3:1757536-1757555 | MS.gene050576:CDS | 25.0% |
| !! | CTACTAGCACTATTTAAAAT+TGG | - | chr7.3:1757538-1757557 | None:intergenic | 25.0% |
| !!! | ATCTTATGCTATACTAGTTT+TGG | + | chr7.3:1756766-1756785 | MS.gene050576:CDS | 25.0% |
| !!! | CATGTTTCAAATTTTAAAGG+AGG | + | chr7.3:1756722-1756741 | MS.gene050576:CDS | 25.0% |
| !!! | CTCTATTTCTGTAAATGATT+TGG | + | chr7.3:1756574-1756593 | MS.gene050576:CDS | 25.0% |
| !!! | TCAATAAAATTAGTTTGTGG+TGG | + | chr7.3:1757891-1757910 | MS.gene050576:intron | 25.0% |
| AACAAAGTAAAGTAGCTCAA+GGG | - | chr7.3:1756063-1756082 | None:intergenic | 30.0% | |
| AAGTGTTTGTGTGTGTATAA+AGG | + | chr7.3:1757244-1757263 | MS.gene050576:CDS | 30.0% | |
| AGAAACAATTGAAAGGAATG+AGG | - | chr7.3:1756188-1756207 | None:intergenic | 30.0% | |
| AGAAACTTAAAGAGCAAAAC+CGG | + | chr7.3:1756915-1756934 | MS.gene050576:CDS | 30.0% | |
| AGGTAAAAAGTGGAAAAAAG+TGG | - | chr7.3:1758314-1758333 | None:intergenic | 30.0% | |
| AGTTGCATCTACACTAAATA+GGG | - | chr7.3:1757966-1757985 | None:intergenic | 30.0% | |
| CAATAATCAAAGGCCAATTT+CGG | - | chr7.3:1758787-1758806 | None:intergenic | 30.0% | |
| CCTGTTTACATTATCATCAT+CGG | - | chr7.3:1758585-1758604 | None:intergenic | 30.0% | |
| CTATGAAAGCAACAAATTGA+AGG | - | chr7.3:1756118-1756137 | None:intergenic | 30.0% | |
| CTCCAATGTTCCATTTAAAT+TGG | + | chr7.3:1756088-1756107 | MS.gene050576:CDS | 30.0% | |
| GAAACAATTGAAAGGAATGA+GGG | - | chr7.3:1756187-1756206 | None:intergenic | 30.0% | |
| GAGAGATAGAAACAATTGAA+AGG | - | chr7.3:1756195-1756214 | None:intergenic | 30.0% | |
| GCGTTTGATAAATGATGTAA+TGG | + | chr7.3:1757132-1757151 | MS.gene050576:CDS | 30.0% | |
| GTGAATCAAGCATATGTTAT+AGG | - | chr7.3:1758353-1758372 | None:intergenic | 30.0% | |
| GTTACAAAACAATCACACAA+TGG | - | chr7.3:1758375-1758394 | None:intergenic | 30.0% | |
| TAAAATTGGTCCATCTGAAT+GGG | - | chr7.3:1757524-1757543 | None:intergenic | 30.0% | |
| TAACAAAGTAAAGTAGCTCA+AGG | - | chr7.3:1756064-1756083 | None:intergenic | 30.0% | |
| TAGGACACAGAATATTCAAA+AGG | - | chr7.3:1758334-1758353 | None:intergenic | 30.0% | |
| TAGTTGCATCTACACTAAAT+AGG | - | chr7.3:1757967-1757986 | None:intergenic | 30.0% | |
| TTAAAATTGGTCCATCTGAA+TGG | - | chr7.3:1757525-1757544 | None:intergenic | 30.0% | |
| TTAGAGATAAGAAAGAGCAA+GGG | + | chr7.3:1756602-1756621 | MS.gene050576:CDS | 30.0% | |
| TTTATACACACACAAACACT+TGG | - | chr7.3:1757245-1757264 | None:intergenic | 30.0% | |
| TTTCAAAAGAAGAGGAATCA+AGG | - | chr7.3:1756276-1756295 | None:intergenic | 30.0% | |
| TTTGCTTTCAATGTTTCAAG+AGG | + | chr7.3:1757045-1757064 | MS.gene050576:CDS | 30.0% | |
| ! | AATCGTTGTGTCAGATTTTT+AGG | + | chr7.3:1757917-1757936 | MS.gene050576:intron | 30.0% |
| ! | ACCATTCAAAATCATCCTTT+TGG | + | chr7.3:1758700-1758719 | MS.gene050576:CDS | 30.0% |
| ! | ACCTTGATTTTCAAAAGAAG+AGG | - | chr7.3:1756284-1756303 | None:intergenic | 30.0% |
| ! | AGGGGGCTTTTTAAATTTAT+TGG | - | chr7.3:1757947-1757966 | None:intergenic | 30.0% |
| ! | CGCTATTTCATTCTTCATTT+AGG | - | chr7.3:1758097-1758116 | None:intergenic | 30.0% |
| ! | GATGATTTTGAATGGTATAC+TGG | - | chr7.3:1758696-1758715 | None:intergenic | 30.0% |
| ! | TCCAAAAGGATGATTTTGAA+TGG | - | chr7.3:1758704-1758723 | None:intergenic | 30.0% |
| ! | TCTTGGTTTGACAAAATTTC+CGG | + | chr7.3:1757793-1757812 | MS.gene050576:intron | 30.0% |
| ! | TTTTCAAACCAACAGTTTAG+AGG | + | chr7.3:1758542-1758561 | MS.gene050576:CDS | 30.0% |
| !! | AAGTATAGGCATTGAGTAAA+TGG | - | chr7.3:1756157-1756176 | None:intergenic | 30.0% |
| !! | AGTATAGGCATTGAGTAAAT+GGG | - | chr7.3:1756156-1756175 | None:intergenic | 30.0% |
| !! | ATGATGATGATGATGGAATT+TGG | + | chr7.3:1755967-1755986 | MS.gene050576:CDS | 30.0% |
| !! | TCCTCTTCTTTTGAAAATCA+AGG | + | chr7.3:1756280-1756299 | MS.gene050576:CDS | 30.0% |
| !! | TCTTTTGAAAATCAAGGTGA+GGG | + | chr7.3:1756286-1756305 | MS.gene050576:CDS | 30.0% |
| !! | TTCTTTTGAAAATCAAGGTG+AGG | + | chr7.3:1756285-1756304 | MS.gene050576:CDS | 30.0% |
| !! | TTGGAGTGTACAAAGTATTT+TGG | + | chr7.3:1755986-1756005 | MS.gene050576:CDS | 30.0% |
| !! | TTTAATGTACAGATGATGGA+AGG | + | chr7.3:1758410-1758429 | MS.gene050576:intron | 30.0% |
| AAAAGAAGAGGAATCAAGGT+GGG | - | chr7.3:1756272-1756291 | None:intergenic | 35.0% | |
| AAGCAGAATGTGTTGGAATT+GGG | + | chr7.3:1756320-1756339 | MS.gene050576:CDS | 35.0% | |
| ACAAAGTAAAGTAGCTCAAG+GGG | - | chr7.3:1756062-1756081 | None:intergenic | 35.0% | |
| ACTTCAAAACCATCCATTTC+AGG | - | chr7.3:1758737-1758756 | None:intergenic | 35.0% | |
| ACTTCTATCATCCTTATCTG+CGG | - | chr7.3:1757425-1757444 | None:intergenic | 35.0% | |
| ATTCAGATAATTGAGGCTAC+CGG | - | chr7.3:1757815-1757834 | None:intergenic | 35.0% | |
| CTCAATGCCTATACTTACTA+TGG | + | chr7.3:1756161-1756180 | MS.gene050576:CDS | 35.0% | |
| CTTCTTCTCAAGTTTCAATC+AGG | + | chr7.3:1758482-1758501 | MS.gene050576:CDS | 35.0% | |
| GAAACTTAAAGAGCAAAACC+GGG | + | chr7.3:1756916-1756935 | MS.gene050576:CDS | 35.0% | |
| GATAAGGATGATAGAAGTTC+TGG | + | chr7.3:1757427-1757446 | MS.gene050576:CDS | 35.0% | |
| GATTATGAAGAAACAGAAGG+AGG | + | chr7.3:1756355-1756374 | MS.gene050576:CDS | 35.0% | |
| GCTGTAAGAGCAATAATCAA+AGG | - | chr7.3:1758797-1758816 | None:intergenic | 35.0% | |
| GGAAATGTTTCAACTCTAAC+TGG | - | chr7.3:1757186-1757205 | None:intergenic | 35.0% | |
| GGAGTAGAAACTTAATACAG+AGG | - | chr7.3:1758293-1758312 | None:intergenic | 35.0% | |
| GTTAGAGATAAGAAAGAGCA+AGG | + | chr7.3:1756601-1756620 | MS.gene050576:CDS | 35.0% | |
| GTTGCATCTACACTAAATAG+GGG | - | chr7.3:1757965-1757984 | None:intergenic | 35.0% | |
| TAAGATGTCTCAACAAACTC+CGG | - | chr7.3:1756752-1756771 | None:intergenic | 35.0% | |
| TAGAGATAAGAAAGAGCAAG+GGG | + | chr7.3:1756603-1756622 | MS.gene050576:CDS | 35.0% | |
| TCATCACCTATTACCATATC+AGG | - | chr7.3:1757304-1757323 | None:intergenic | 35.0% | |
| TGATATGGTAATAGGTGATG+AGG | + | chr7.3:1757303-1757322 | MS.gene050576:CDS | 35.0% | |
| TGCGTATCTGTTTATGATGT+TGG | + | chr7.3:1757850-1757869 | MS.gene050576:intron | 35.0% | |
| TGGGATTATGAAGAAACAGA+AGG | + | chr7.3:1756352-1756371 | MS.gene050576:CDS | 35.0% | |
| TTGAAGTTGCAAGGAAGATT+CGG | + | chr7.3:1758750-1758769 | MS.gene050576:CDS | 35.0% | |
| TTGCATCTACACTAAATAGG+GGG | - | chr7.3:1757964-1757983 | None:intergenic | 35.0% | |
| TTGTGTGTGTATAAAGGCTT+TGG | + | chr7.3:1757250-1757269 | MS.gene050576:CDS | 35.0% | |
| TTTCTTGAAGCAGAATGTGT+TGG | + | chr7.3:1756313-1756332 | MS.gene050576:CDS | 35.0% | |
| ! | AACTGTGATGATGATGATGA+TGG | + | chr7.3:1755960-1755979 | MS.gene050576:CDS | 35.0% |
| ! | ATGAAGAATGAAATAGCGGA+AGG | + | chr7.3:1758099-1758118 | MS.gene050576:intron | 35.0% |
| ! | CCGATGATGATAATGTAAAC+AGG | + | chr7.3:1758582-1758601 | MS.gene050576:CDS | 35.0% |
| ! | GATTTTGAATGGTATACTGG+AGG | - | chr7.3:1758693-1758712 | None:intergenic | 35.0% |
| ! | GTTGCTTTCATAGTTCTATG+TGG | + | chr7.3:1756125-1756144 | MS.gene050576:CDS | 35.0% |
| ! | TGAAGAATGAAATAGCGGAA+GGG | + | chr7.3:1758100-1758119 | MS.gene050576:intron | 35.0% |
| ! | TTTTGCAAATGCTGAAGCTT+AGG | - | chr7.3:1757591-1757610 | None:intergenic | 35.0% |
| !! | AAATTTTAAAGGAGGGACAC+CGG | + | chr7.3:1756730-1756749 | MS.gene050576:CDS | 35.0% |
| !! | AGATGATGGAAGGTAATATC+TGG | + | chr7.3:1758420-1758439 | MS.gene050576:intron | 35.0% |
| !!! | TTCATCGGGTTTTGATTGTT+TGG | + | chr7.3:1758655-1758674 | MS.gene050576:CDS | 35.0% |
| AAACCCAGGATTGAATGCAA+AGG | - | chr7.3:1757028-1757047 | None:intergenic | 40.0% | |
| AAAGAAGAGGAATCAAGGTG+GGG | - | chr7.3:1756271-1756290 | None:intergenic | 40.0% | |
| AAGAACAGATGCATGAGACA+AGG | - | chr7.3:1756873-1756892 | None:intergenic | 40.0% | |
| AAGTGCAGAAGAACGCATAA+AGG | + | chr7.3:1758817-1758836 | MS.gene050576:CDS | 40.0% | |
| ACCTATTACCATATCAGGCA+AGG | - | chr7.3:1757299-1757318 | None:intergenic | 40.0% | |
| AGACCTTTGCATTCAATCCT+GGG | + | chr7.3:1757022-1757041 | MS.gene050576:CDS | 40.0% | |
| AGAGATAAGAAAGAGCAAGG+GGG | + | chr7.3:1756604-1756623 | MS.gene050576:CDS | 40.0% | |
| AGATGCAACTAATTGCATGC+AGG | + | chr7.3:1757976-1757995 | MS.gene050576:intron | 40.0% | |
| AGCAGAATGTGTTGGAATTG+GGG | + | chr7.3:1756321-1756340 | MS.gene050576:CDS | 40.0% | |
| AGCAGCTCATACTTTGTCAA+AGG | - | chr7.3:1757699-1757718 | None:intergenic | 40.0% | |
| AGCTCATACTTTGTCAAAGG+TGG | - | chr7.3:1757696-1757715 | None:intergenic | 40.0% | |
| AGTTGCATAATTGTGCGGTT+TGG | + | chr7.3:1756477-1756496 | MS.gene050576:CDS | 40.0% | |
| ATCAAAACCCGATGAAACAG+CGG | - | chr7.3:1758651-1758670 | None:intergenic | 40.0% | |
| ATGAGGGCCATAGTAAGTAT+AGG | - | chr7.3:1756171-1756190 | None:intergenic | 40.0% | |
| ATTATGCAACTCCAAGGCTT+TGG | - | chr7.3:1756468-1756487 | None:intergenic | 40.0% | |
| CAAAAGAAGAGGAATCAAGG+TGG | - | chr7.3:1756273-1756292 | None:intergenic | 40.0% | |
| CAAAGCCTTGAGTTCGATTT+CGG | - | chr7.3:1756797-1756816 | None:intergenic | 40.0% | |
| CACAACAATGAACCTAAGGA+GGG | + | chr7.3:1757565-1757584 | MS.gene050576:CDS | 40.0% | |
| CAGGCATTTGAAGATCCAAA+AGG | - | chr7.3:1758718-1758737 | None:intergenic | 40.0% | |
| CATCATAAACAGATACGCAC+AGG | - | chr7.3:1757849-1757868 | None:intergenic | 40.0% | |
| CGTTAAGACCTCTAAACTGT+TGG | - | chr7.3:1758553-1758572 | None:intergenic | 40.0% | |
| CTCATACTTTGTCAAAGGTG+GGG | - | chr7.3:1757694-1757713 | None:intergenic | 40.0% | |
| CTTCAAATGCCTGAAATGGA+TGG | + | chr7.3:1758725-1758744 | MS.gene050576:CDS | 40.0% | |
| CTTCAGCATTTGCAAAACAC+TGG | + | chr7.3:1757594-1757613 | MS.gene050576:CDS | 40.0% | |
| CTTGGAGTTGCATAATTGTG+CGG | + | chr7.3:1756472-1756491 | MS.gene050576:CDS | 40.0% | |
| GAAACATTGAAAGCAAACCC+AGG | - | chr7.3:1757042-1757061 | None:intergenic | 40.0% | |
| GAAATTTCAGCCAACGACAA+AGG | + | chr7.3:1757154-1757173 | MS.gene050576:CDS | 40.0% | |
| GAAGCAGAATGTGTTGGAAT+TGG | + | chr7.3:1756319-1756338 | MS.gene050576:CDS | 40.0% | |
| GATGCAACTAATTGCATGCA+GGG | + | chr7.3:1757977-1757996 | MS.gene050576:intron | 40.0% | |
| GCTCATACTTTGTCAAAGGT+GGG | - | chr7.3:1757695-1757714 | None:intergenic | 40.0% | |
| GGATCTTCAAATGCCTGAAA+TGG | + | chr7.3:1758721-1758740 | MS.gene050576:CDS | 40.0% | |
| GTTCGTTAGCTATCTCATGA+AGG | - | chr7.3:1758892-1758911 | None:intergenic | 40.0% | |
| TCCTTGCCTGATATGGTAAT+AGG | + | chr7.3:1757295-1757314 | MS.gene050576:CDS | 40.0% | |
| TGAAAGTGATACCGCAGATA+AGG | + | chr7.3:1757411-1757430 | MS.gene050576:intron | 40.0% | |
| TGGATATCACCAAACTCTCT+GGG | + | chr7.3:1758440-1758459 | MS.gene050576:CDS | 40.0% | |
| TTCTTCCGAAATCGAACTCA+AGG | + | chr7.3:1756789-1756808 | MS.gene050576:CDS | 40.0% | |
| TTTCAATCAGGATCATCGCA+TGG | + | chr7.3:1758494-1758513 | MS.gene050576:CDS | 40.0% | |
| TTTGAGAAAGTGATGAGCCA+TGG | + | chr7.3:1756992-1757011 | MS.gene050576:CDS | 40.0% | |
| TTTGGAAAGCTCAACAAGTG+TGG | - | chr7.3:1756450-1756469 | None:intergenic | 40.0% | |
| ! | GAACTACATTTTACGCACAG+AGG | + | chr7.3:1757765-1757784 | MS.gene050576:intron | 40.0% |
| ! | TCAAGTAACCGCTGTTTCAT+CGG | + | chr7.3:1758640-1758659 | MS.gene050576:CDS | 40.0% |
| !! | ATGAAGTATCGGCATACGAA+TGG | - | chr7.3:1756705-1756724 | None:intergenic | 40.0% |
| !!! | TGGATGGTTTTGAAGTTGCA+AGG | + | chr7.3:1758741-1758760 | MS.gene050576:CDS | 40.0% |
| AAAAAGACTCAGCCTGTGCT+TGG | + | chr7.3:1758188-1758207 | MS.gene050576:intron | 45.0% | |
| AAGAAGCTGCTTGAGAAGCT+GGG | + | chr7.3:1758614-1758633 | MS.gene050576:CDS | 45.0% | |
| AAGTGATGAGCCATGGAATG+AGG | + | chr7.3:1756999-1757018 | MS.gene050576:CDS | 45.0% | |
| AGAAACAGAAGGAGGCTAGT+TGG | + | chr7.3:1756363-1756382 | MS.gene050576:CDS | 45.0% | |
| AGCTGCACGTTTAGTGAGAA+GGG | + | chr7.3:1758231-1758250 | MS.gene050576:intron | 45.0% | |
| ATCACCAAACTCTCTGGGTT+TGG | + | chr7.3:1758445-1758464 | MS.gene050576:CDS | 45.0% | |
| ATCACCCTTCTATCCTCATC+AGG | - | chr7.3:1756506-1756525 | None:intergenic | 45.0% | |
| ATCCATTCATTCCCACCTGT+AGG | - | chr7.3:1758850-1758869 | None:intergenic | 45.0% | |
| CAAAGACTTCCTAATCTCGC+GGG | - | chr7.3:1756405-1756424 | None:intergenic | 45.0% | |
| CACTATCTCCATCTCATGGT+GGG | - | chr7.3:1756822-1756841 | None:intergenic | 45.0% | |
| CATAAAGGAGAGATGCCTAC+AGG | + | chr7.3:1758832-1758851 | MS.gene050576:CDS | 45.0% | |
| CATTTGCAAAACACTGGTGC+AGG | + | chr7.3:1757600-1757619 | MS.gene050576:CDS | 45.0% | |
| CCAAAGACTTCCTAATCTCG+CGG | - | chr7.3:1756406-1756425 | None:intergenic | 45.0% | |
| CCACAACAATGAACCTAAGG+AGG | + | chr7.3:1757564-1757583 | MS.gene050576:CDS | 45.0% | |
| CCATCTACATTCCACGATGA+GGG | + | chr7.3:1757204-1757223 | MS.gene050576:CDS | 45.0% | |
| CCTCCTTAGGTTCATTGTTG+TGG | - | chr7.3:1757567-1757586 | None:intergenic | 45.0% | |
| CGAAATCGAACTCAAGGCTT+TGG | + | chr7.3:1756795-1756814 | MS.gene050576:CDS | 45.0% | |
| CGCACAATTATGCAACTCCA+AGG | - | chr7.3:1756474-1756493 | None:intergenic | 45.0% | |
| CGTTAGCTATCTCATGAAGG+AGG | - | chr7.3:1758889-1758908 | None:intergenic | 45.0% | |
| CTGGAAACTTCCTTTGTCGT+TGG | - | chr7.3:1757167-1757186 | None:intergenic | 45.0% | |
| CTGGATATCACCAAACTCTC+TGG | + | chr7.3:1758439-1758458 | MS.gene050576:CDS | 45.0% | |
| GAGACCTTTGCATTCAATCC+TGG | + | chr7.3:1757021-1757040 | MS.gene050576:CDS | 45.0% | |
| GAGCTATGAAAACTCTTCGC+CGG | - | chr7.3:1756557-1756576 | None:intergenic | 45.0% | |
| GATGCCTGATGAGGATAGAA+GGG | + | chr7.3:1756499-1756518 | MS.gene050576:CDS | 45.0% | |
| GCACCACAACAATGAACCTA+AGG | + | chr7.3:1757561-1757580 | MS.gene050576:CDS | 45.0% | |
| GCTATCTCATGAAGGAGGAT+AGG | - | chr7.3:1758884-1758903 | None:intergenic | 45.0% | |
| GGAAGTTCCAAAGCCGAAAT+TGG | + | chr7.3:1758771-1758790 | MS.gene050576:CDS | 45.0% | |
| GGGAACTAGTACCAGTTATC+TGG | - | chr7.3:1757504-1757523 | None:intergenic | 45.0% | |
| GGTACTAGTTCCCATTCAGA+TGG | + | chr7.3:1757511-1757530 | MS.gene050576:CDS | 45.0% | |
| GTAAAGTAGCTCAAGGGGTA+AGG | - | chr7.3:1756057-1756076 | None:intergenic | 45.0% | |
| TAAGAAGCTGCTTGAGAAGC+TGG | + | chr7.3:1758613-1758632 | MS.gene050576:CDS | 45.0% | |
| TCAAAGGCCAATTTCGGCTT+TGG | - | chr7.3:1758781-1758800 | None:intergenic | 45.0% | |
| TCCATCTACATTCCACGATG+AGG | + | chr7.3:1757203-1757222 | MS.gene050576:CDS | 45.0% | |
| TGAAAACTCTTCGCCGGATT+CGG | - | chr7.3:1756551-1756570 | None:intergenic | 45.0% | |
| TGCAGTGGCACATGAAACAA+GGG | - | chr7.3:1756240-1756259 | None:intergenic | 45.0% | |
| TGGTAATAGGTGATGAGGCA+AGG | + | chr7.3:1757308-1757327 | MS.gene050576:CDS | 45.0% | |
| TGTTGAGCTTTCCAAAGCCT+TGG | + | chr7.3:1756454-1756473 | MS.gene050576:CDS | 45.0% | |
| TTGCAGTGGCACATGAAACA+AGG | - | chr7.3:1756241-1756260 | None:intergenic | 45.0% | |
| ! | CAAGTAACCGCTGTTTCATC+GGG | + | chr7.3:1758641-1758660 | MS.gene050576:CDS | 45.0% |
| ! | GGCACAAAAGCATGCAATGA+TGG | + | chr7.3:1756949-1756968 | MS.gene050576:CDS | 45.0% |
| ! | TCATGAGTTGAAGCCGAATC+CGG | + | chr7.3:1756535-1756554 | MS.gene050576:CDS | 45.0% |
| AAAGGAGAGATGCCTACAGG+TGG | + | chr7.3:1758835-1758854 | MS.gene050576:CDS | 50.0% | |
| AACTCTCTGGGTTTGGCACA+AGG | + | chr7.3:1758452-1758471 | MS.gene050576:CDS | 50.0% | |
| AAGGAGAGATGCCTACAGGT+GGG | + | chr7.3:1758836-1758855 | MS.gene050576:CDS | 50.0% | |
| ACTCTCTGGGTTTGGCACAA+GGG | + | chr7.3:1758453-1758472 | MS.gene050576:CDS | 50.0% | |
| ACTTTGTCAAAGGTGGGGAG+AGG | - | chr7.3:1757689-1757708 | None:intergenic | 50.0% | |
| CACATGAAACAAGGGCAGTG+AGG | - | chr7.3:1756232-1756251 | None:intergenic | 50.0% | |
| CAGCTGCACGTTTAGTGAGA+AGG | + | chr7.3:1758230-1758249 | MS.gene050576:intron | 50.0% | |
| CCACCATGAGATGGAGATAG+TGG | + | chr7.3:1756820-1756839 | MS.gene050576:CDS | 50.0% | |
| CCACTATCTCCATCTCATGG+TGG | - | chr7.3:1756823-1756842 | None:intergenic | 50.0% | |
| CCCTCATCGTGGAATGTAGA+TGG | - | chr7.3:1757207-1757226 | None:intergenic | 50.0% | |
| CCGCGAGATTAGGAAGTCTT+TGG | + | chr7.3:1756403-1756422 | MS.gene050576:CDS | 50.0% | |
| CCTCCACTATCTCCATCTCA+TGG | - | chr7.3:1756826-1756845 | None:intergenic | 50.0% | |
| CTGCGAGTAGTGGTGAATCT+GGG | + | chr7.3:1756660-1756679 | MS.gene050576:CDS | 50.0% | |
| GCAAAGGTCTCCTCATTCCA+TGG | - | chr7.3:1757012-1757031 | None:intergenic | 50.0% | |
| GCAGAGATCCTTGCCTGATA+TGG | + | chr7.3:1757288-1757307 | MS.gene050576:CDS | 50.0% | |
| GGATGCCTGATGAGGATAGA+AGG | + | chr7.3:1756498-1756517 | MS.gene050576:CDS | 50.0% | |
| GGTGGGGAAAGTAATTGCAG+TGG | - | chr7.3:1756255-1756274 | None:intergenic | 50.0% | |
| TACGCACAGAGGATGACTCT+TGG | + | chr7.3:1757776-1757795 | MS.gene050576:intron | 50.0% | |
| TCTCAAATGAGCTCCTTGCC+TGG | - | chr7.3:1756979-1756998 | None:intergenic | 50.0% | |
| TGCCTACAGGTGGGAATGAA+TGG | + | chr7.3:1758845-1758864 | MS.gene050576:CDS | 50.0% | |
| TGCGAGTAGTGGTGAATCTG+GGG | + | chr7.3:1756661-1756680 | MS.gene050576:CDS | 50.0% | |
| TGGAATTGGGGCAAGAGGTT+GGG | + | chr7.3:1756333-1756352 | MS.gene050576:CDS | 50.0% | |
| TGTGCCAAACCCAGAGAGTT+TGG | - | chr7.3:1758452-1758471 | None:intergenic | 50.0% | |
| TGTGTTGGAATTGGGGCAAG+AGG | + | chr7.3:1756328-1756347 | MS.gene050576:CDS | 50.0% | |
| TTGAGGCCTGATTCTGCACT+CGG | + | chr7.3:1756635-1756654 | MS.gene050576:CDS | 50.0% | |
| TTGGAATTGGGGCAAGAGGT+TGG | + | chr7.3:1756332-1756351 | MS.gene050576:CDS | 50.0% | |
| ! | ACGTTTAGTGAGAAGGGCAC+TGG | + | chr7.3:1758237-1758256 | MS.gene050576:intron | 50.0% |
| ! | ACTTTTCACCTGCACGTAGC+AGG | - | chr7.3:1758925-1758944 | None:intergenic | 50.0% |
| ! | AGGAGGCTAGTTGGCATGTT+AGG | + | chr7.3:1756372-1756391 | MS.gene050576:CDS | 50.0% |
| ! | CCATGAGATGGAGATAGTGG+AGG | + | chr7.3:1756823-1756842 | MS.gene050576:CDS | 50.0% |
| !! | CGTTTAGTGAGAAGGGCACT+GGG | + | chr7.3:1758238-1758257 | MS.gene050576:intron | 50.0% |
| AAATGAGCTCCTTGCCTGGC+TGG | - | chr7.3:1756975-1756994 | None:intergenic | 55.0% | |
| ACGAATGGCTGCTACAGCAC+CGG | - | chr7.3:1756690-1756709 | None:intergenic | 55.0% | |
| ACTACCGCTAGACCAAGCAC+AGG | - | chr7.3:1758203-1758222 | None:intergenic | 55.0% | |
| AGAACAGTCCTGCTACGTGC+AGG | + | chr7.3:1758914-1758933 | MS.gene050576:CDS | 55.0% | |
| AGTGGAGGTAGTTGCTGACC+AGG | + | chr7.3:1756838-1756857 | MS.gene050576:CDS | 55.0% | |
| AGTGGTGAATCTGGGGACTC+CGG | + | chr7.3:1756668-1756687 | MS.gene050576:CDS | 55.0% | |
| AGTTGCTGACCAGGTTGCTG+TGG | + | chr7.3:1756847-1756866 | MS.gene050576:CDS | 55.0% | |
| CTGAAGCTTAGGCCCTCCTT+AGG | - | chr7.3:1757580-1757599 | None:intergenic | 55.0% | |
| GCAAGAAGCTTCCCTCATCG+TGG | - | chr7.3:1757218-1757237 | None:intergenic | 55.0% | |
| GCTGCGAGTAGTGGTGAATC+TGG | + | chr7.3:1756659-1756678 | MS.gene050576:CDS | 55.0% | |
| GGATGTTGACCCGCGAGATT+AGG | + | chr7.3:1756393-1756412 | MS.gene050576:CDS | 55.0% | |
| TCAGCCTGTGCTTGGTCTAG+CGG | + | chr7.3:1758196-1758215 | MS.gene050576:intron | 55.0% | |
| TTTGTGCCTGTTGCAACGCC+CGG | - | chr7.3:1756937-1756956 | None:intergenic | 55.0% | |
| ! | GCTTTGGACCCACCATGAGA+TGG | + | chr7.3:1756811-1756830 | MS.gene050576:CDS | 55.0% |
| ! | TGCGGTTTGGATGCCTGATG+AGG | + | chr7.3:1756490-1756509 | MS.gene050576:CDS | 55.0% |
| !!! | GCAAGGGGGTGTCGATTTTG+AGG | + | chr7.3:1756618-1756637 | MS.gene050576:CDS | 55.0% |
| CAATGATGGCCAGCCAGGCA+AGG | + | chr7.3:1756963-1756982 | MS.gene050576:CDS | 60.0% | |
| GAGACAAGGCCACAGCAACC+TGG | - | chr7.3:1756859-1756878 | None:intergenic | 60.0% | |
| GCAGCTCCGAGTGCAGAATC+AGG | - | chr7.3:1756644-1756663 | None:intergenic | 60.0% | |
| GCATGCAATGATGGCCAGCC+AGG | + | chr7.3:1756958-1756977 | MS.gene050576:CDS | 60.0% | |
| ! | GCAAAACCGGGCGTTGCAAC+AGG | + | chr7.3:1756928-1756947 | MS.gene050576:CDS | 60.0% |
| GCACTCGGAGCTGCGAGTAG+TGG | + | chr7.3:1756650-1756669 | MS.gene050576:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 1755931 | 1758949 | 1755931 | ID=MS.gene050576 |
| chr7.3 | mRNA | 1755931 | 1758949 | 1755931 | ID=MS.gene050576.t1;Parent=MS.gene050576 |
| chr7.3 | exon | 1755931 | 1756007 | 1755931 | ID=MS.gene050576.t1.exon1;Parent=MS.gene050576.t1 |
| chr7.3 | CDS | 1755931 | 1756007 | 1755931 | ID=cds.MS.gene050576.t1;Parent=MS.gene050576.t1 |
| chr7.3 | exon | 1756085 | 1757329 | 1756085 | ID=MS.gene050576.t1.exon2;Parent=MS.gene050576.t1 |
| chr7.3 | CDS | 1756085 | 1757329 | 1756085 | ID=cds.MS.gene050576.t1;Parent=MS.gene050576.t1 |
| chr7.3 | exon | 1757417 | 1757621 | 1757417 | ID=MS.gene050576.t1.exon3;Parent=MS.gene050576.t1 |
| chr7.3 | CDS | 1757417 | 1757621 | 1757417 | ID=cds.MS.gene050576.t1;Parent=MS.gene050576.t1 |
| chr7.3 | exon | 1758422 | 1758949 | 1758422 | ID=MS.gene050576.t1.exon4;Parent=MS.gene050576.t1 |
| chr7.3 | CDS | 1758422 | 1758949 | 1758422 | ID=cds.MS.gene050576.t1;Parent=MS.gene050576.t1 |
| Gene Sequence |
| Protein sequence |
