AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene004903

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene004903.t1 MTR_1g076690 97.931 580 12 0 1 580 1 580 0.0 1180
MS.gene004903.t1 MTR_6g061710 58.507 576 169 7 6 580 18 524 0.0 680
MS.gene004903.t1 MTR_6g016880 34.949 392 225 10 198 573 45 422 2.38e-78 254
MS.gene004903.t1 MTR_8g099300 36.158 354 212 8 223 570 74 419 4.83e-77 250
MS.gene004903.t1 MTR_7g019120 34.783 368 224 6 211 573 67 423 5.72e-77 251
MS.gene004903.t1 MTR_7g033230 35.240 437 250 13 145 572 199 611 5.19e-73 245
MS.gene004903.t1 MTR_7g033230 35.240 437 250 13 145 572 269 681 2.30e-72 245
MS.gene004903.t1 MTR_6g016875 34.239 368 217 7 215 571 56 409 1.16e-70 234
MS.gene004903.t1 MTR_6g007777 35.196 358 212 9 223 573 116 460 1.47e-70 235
MS.gene004903.t1 MTR_8g027900 36.188 362 216 9 215 570 203 555 1.58e-70 237
MS.gene004903.t1 MTR_5g035090 36.538 364 200 10 223 572 83 429 5.92e-70 232
MS.gene004903.t1 MTR_3g109840 34.351 393 233 10 186 572 44 417 1.22e-67 226
MS.gene004903.t1 MTR_2g016060 35.135 370 207 10 219 572 50 402 2.92e-67 224
MS.gene004903.t1 MTR_8g104970 33.898 413 245 12 165 571 76 466 3.83e-65 221
MS.gene004903.t1 MTR_5g035080 34.167 360 215 10 223 572 75 422 5.29e-65 219
MS.gene004903.t1 MTR_5g035150 34.160 363 212 11 223 572 85 433 7.23e-65 219
MS.gene004903.t1 MTR_5g035070 35.734 361 209 10 223 572 87 435 2.48e-60 207
MS.gene004903.t1 MTR_7g093450 28.305 537 289 19 105 575 87 593 6.07e-54 193
MS.gene004903.t1 MTR_7g094750 33.607 366 207 10 223 573 91 435 2.43e-53 188
MS.gene004903.t1 MTR_0136s0010 31.025 361 207 12 223 566 170 505 8.06e-53 189
MS.gene004903.t1 MTR_5g033800 31.300 377 221 11 201 566 130 479 4.08e-51 183
MS.gene004903.t1 MTR_8g093870 31.122 392 212 14 204 570 114 472 1.60e-50 181
MS.gene004903.t1 MTR_4g126950 28.861 395 241 10 190 570 78 446 1.87e-50 181
MS.gene004903.t1 MTR_4g125060 29.356 528 277 20 96 570 26 510 6.28e-50 180
MS.gene004903.t1 MTR_8g069790 30.311 386 222 12 198 566 157 512 1.15e-49 180
MS.gene004903.t1 MTR_7g109550 32.432 370 183 15 223 567 137 464 2.27e-49 178
MS.gene004903.t1 MTR_4g125060 29.020 510 267 19 114 570 72 539 6.65e-49 178
MS.gene004903.t1 MTR_2g022560 32.514 366 206 9 222 570 96 437 5.88e-48 174
MS.gene004903.t1 MTR_5g071350 31.034 377 224 11 205 566 40 395 6.60e-48 172
MS.gene004903.t1 MTR_4g125060 28.033 478 274 16 117 570 40 471 1.16e-47 173
MS.gene004903.t1 MTR_8g463790 28.989 376 226 13 219 578 67 417 1.25e-46 169
MS.gene004903.t1 MTR_5g059400 30.000 380 211 12 219 572 171 521 5.85e-46 170
MS.gene004903.t1 MTR_1g116130 30.000 380 211 12 219 572 171 521 5.85e-46 170
MS.gene004903.t1 MTR_4g121560 28.462 390 244 10 195 570 85 453 1.51e-45 167
MS.gene004903.t1 MTR_1g112210 31.073 354 187 14 223 566 59 365 1.18e-41 154
MS.gene004903.t1 MTR_3g049330 29.670 364 210 12 212 566 20 346 1.98e-41 153
MS.gene004903.t1 MTR_1g112210 30.726 358 196 14 223 566 59 378 2.16e-41 154
MS.gene004903.t1 MTR_1g058380 29.952 414 215 15 204 580 29 404 4.36e-41 154
MS.gene004903.t1 MTR_1g050448 30.628 382 223 13 196 570 29 375 1.45e-40 151
MS.gene004903.t1 MTR_5g083260 28.571 399 250 16 184 567 43 421 1.96e-40 152
MS.gene004903.t1 MTR_3g071650 28.061 392 256 13 186 567 52 427 4.85e-40 151
MS.gene004903.t1 MTR_3g070900 30.278 360 215 13 223 566 106 445 5.33e-39 149
MS.gene004903.t1 MTR_4g014430 27.778 378 226 15 212 570 97 446 1.88e-38 147
MS.gene004903.t1 MTR_4g014440 28.184 369 225 12 221 570 60 407 2.02e-38 146
MS.gene004903.t1 MTR_7g070060 28.232 379 244 13 205 570 46 409 7.34e-38 145
MS.gene004903.t1 MTR_3g021060 29.891 368 188 13 223 570 46 363 1.14e-37 143
MS.gene004903.t1 MTR_2g073510 29.600 375 205 17 212 570 22 353 1.73e-37 142
MS.gene004903.t1 MTR_3g464570 28.056 360 213 11 223 566 43 372 2.10e-37 143
MS.gene004903.t1 MTR_3g090120 29.032 372 213 14 222 576 128 465 4.25e-37 144
MS.gene004903.t1 MTR_1g111010 31.564 358 187 15 223 570 32 341 5.08e-37 141
MS.gene004903.t1 MTR_8g093530 26.525 377 232 11 211 575 78 421 1.26e-36 142
MS.gene004903.t1 MTR_3g035830 28.415 366 188 13 223 566 31 344 1.27e-36 140
MS.gene004903.t1 MTR_2g091175 30.199 351 200 13 223 566 50 362 9.17e-36 138
MS.gene004903.t1 MTR_2g015720 30.471 361 194 16 219 566 38 354 1.03e-35 137
MS.gene004903.t1 MTR_5g034810 27.083 384 236 12 190 566 2 348 1.05e-35 137
MS.gene004903.t1 MTR_4g079700 29.577 355 197 14 223 566 47 359 3.91e-35 136
MS.gene004903.t1 MTR_3g021090 28.689 366 187 13 223 566 31 344 4.65e-35 137
MS.gene004903.t1 MTR_7g019140 50.476 105 52 0 211 315 67 171 4.06e-34 127
MS.gene004903.t1 MTR_5g082880 27.869 366 219 13 223 566 165 507 6.92e-34 135
MS.gene004903.t1 MTR_4g088030 28.371 356 207 12 220 566 30 346 8.30e-34 132
MS.gene004903.t1 MTR_4g016940 26.923 364 228 14 223 570 86 427 1.43e-33 133
MS.gene004903.t1 MTR_7g068920 25.895 363 233 13 223 570 80 421 3.97e-33 132
MS.gene004903.t1 MTR_7g094750 34.146 246 142 7 223 456 91 328 6.07e-32 126
MS.gene004903.t1 MTR_2g073500 29.363 361 200 14 218 566 24 341 6.91e-32 126
MS.gene004903.t1 MTR_4g092830 27.198 364 230 12 223 570 48 392 1.21e-31 127
MS.gene004903.t1 MTR_5g035120 51.685 89 43 0 223 311 75 163 3.40e-31 119
MS.gene004903.t1 MTR_4g087730 28.571 350 208 13 223 566 45 358 3.91e-30 122
MS.gene004903.t1 MTR_5g033800 34.826 201 115 5 201 393 130 322 1.60e-29 120
MS.gene004903.t1 MTR_6g016240 24.934 377 235 12 215 568 63 414 1.15e-28 119
MS.gene004903.t1 MTR_5g035140 31.660 259 150 12 327 573 25 268 3.41e-28 114
MS.gene004903.t1 MTR_7g070060 44.444 108 59 1 205 311 46 153 1.64e-25 107
MS.gene004903.t1 MTR_3g464570 25.424 295 174 11 287 565 3 267 1.34e-16 80.9
MS.gene004903.t1 MTR_7g070060 24.351 308 206 12 275 570 15 307 2.04e-15 77.8
MS.gene004903.t1 MTR_0929s0010 46.667 60 32 0 211 270 67 126 9.29e-14 68.6
MS.gene004903.t1 MTR_7g019130 31.068 103 69 1 359 461 24 124 1.57e-13 68.6
MS.gene004903.t1 MTR_5g069320 24.579 297 147 11 278 563 156 386 2.58e-13 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene004903.t1 AT4G25360 55.345 580 188 9 5 578 18 532 0.0 636
MS.gene004903.t1 AT4G25360 55.345 580 188 9 5 578 18 532 0.0 636
MS.gene004903.t1 AT5G51640 73.727 373 95 2 211 580 126 498 0.0 614
MS.gene004903.t1 AT5G15900 38.265 392 216 12 197 577 40 416 5.22e-82 263
MS.gene004903.t1 AT5G15900 38.107 391 218 11 197 577 59 435 1.05e-81 263
MS.gene004903.t1 AT1G01430 37.726 387 223 11 196 570 67 447 2.17e-81 263
MS.gene004903.t1 AT5G15890 37.640 356 196 8 223 571 187 523 4.24e-78 256
MS.gene004903.t1 AT4G11090 38.071 394 226 12 186 570 41 425 7.71e-78 253
MS.gene004903.t1 AT4G23790 37.360 356 208 8 223 570 79 427 9.45e-77 250
MS.gene004903.t1 AT1G70230 38.462 364 181 11 223 572 79 413 1.78e-75 246
MS.gene004903.t1 AT4G01080 38.315 368 209 9 214 575 81 436 1.03e-74 245
MS.gene004903.t1 AT3G02440 33.803 355 217 7 223 571 127 469 2.65e-73 242
MS.gene004903.t1 AT3G02440 33.803 355 217 7 223 571 135 477 2.81e-73 242
MS.gene004903.t1 AT3G28150 32.410 361 223 8 219 572 66 412 1.38e-65 220
MS.gene004903.t1 AT5G20590 32.964 361 201 11 222 566 140 475 2.58e-52 186
MS.gene004903.t1 AT1G60790 30.083 482 277 16 110 566 82 528 3.43e-52 187
MS.gene004903.t1 AT5G49340 31.169 385 214 9 204 566 82 437 5.26e-52 185
MS.gene004903.t1 AT5G06700 29.834 362 210 10 223 566 255 590 1.47e-49 181
MS.gene004903.t1 AT3G06080 30.481 374 213 10 221 573 101 448 1.86e-48 176
MS.gene004903.t1 AT1G73140 30.831 373 227 11 213 574 57 409 6.79e-48 172
MS.gene004903.t1 AT5G19160 30.667 375 225 11 221 579 97 452 6.46e-47 171
MS.gene004903.t1 AT3G12060 30.055 366 228 9 223 577 196 544 7.39e-47 173
MS.gene004903.t1 AT5G20680 29.657 408 224 13 189 570 87 457 8.35e-47 171
MS.gene004903.t1 AT3G62390 29.805 359 208 9 223 566 138 467 1.60e-46 170
MS.gene004903.t1 AT5G64020 30.890 382 200 17 223 570 57 408 2.78e-46 168
MS.gene004903.t1 AT5G20680 29.657 408 224 13 189 570 163 533 3.08e-46 171
MS.gene004903.t1 AT5G20680 29.657 408 224 13 189 570 181 551 3.78e-46 171
MS.gene004903.t1 AT5G20680 29.657 408 224 13 189 570 181 551 3.78e-46 171
MS.gene004903.t1 AT5G20680 29.657 408 224 13 189 570 181 551 3.78e-46 171
MS.gene004903.t1 AT5G20680 29.657 408 224 13 189 570 181 551 3.78e-46 171
MS.gene004903.t1 AT5G06230 29.333 375 221 12 212 566 10 360 5.26e-43 158
MS.gene004903.t1 AT5G06230 29.333 375 221 12 212 566 51 401 1.26e-42 158
MS.gene004903.t1 AT2G40160 28.431 408 245 15 189 573 44 427 4.36e-42 157
MS.gene004903.t1 AT2G40160 28.501 407 244 15 189 572 44 426 1.01e-41 156
MS.gene004903.t1 AT2G30010 30.628 382 215 13 207 566 39 392 2.63e-41 154
MS.gene004903.t1 AT2G30010 30.628 382 215 13 207 566 82 435 4.58e-41 154
MS.gene004903.t1 AT3G14850 29.888 358 198 13 222 566 33 350 6.47e-41 152
MS.gene004903.t1 AT3G11570 30.409 342 200 12 239 566 98 415 2.80e-40 152
MS.gene004903.t1 AT2G40320 28.871 381 232 16 204 567 61 419 4.74e-40 151
MS.gene004903.t1 AT2G30900 29.577 355 203 12 223 566 43 361 5.94e-40 149
MS.gene004903.t1 AT5G64470 28.184 369 215 14 223 570 55 394 8.26e-40 150
MS.gene004903.t1 AT3G54260 30.833 360 201 12 223 570 51 374 1.11e-39 149
MS.gene004903.t1 AT3G11030 27.123 365 241 12 213 567 96 445 5.14e-39 149
MS.gene004903.t1 AT5G64470 28.108 370 220 14 223 570 55 400 1.09e-38 147
MS.gene004903.t1 AT2G31110 30.110 362 209 14 213 566 33 358 6.97e-38 144
MS.gene004903.t1 AT1G29050 28.283 396 237 12 185 570 20 378 2.16e-37 143
MS.gene004903.t1 AT1G48880 27.614 373 223 11 212 573 106 442 6.51e-37 143
MS.gene004903.t1 AT5G01620 29.058 382 219 17 211 570 98 449 1.03e-36 142
MS.gene004903.t1 AT5G01620 29.058 382 219 17 211 570 98 449 1.03e-36 142
MS.gene004903.t1 AT5G01620 29.058 382 219 17 211 570 106 457 1.25e-36 142
MS.gene004903.t1 AT2G14530 27.461 386 227 15 209 570 50 406 1.30e-36 141
MS.gene004903.t1 AT2G37720 27.224 371 210 13 223 567 143 479 6.64e-36 140
MS.gene004903.t1 AT2G34070 28.099 363 206 14 221 570 63 383 1.32e-35 138
MS.gene004903.t1 AT2G38320 27.816 435 250 20 163 570 7 404 4.54e-35 137
MS.gene004903.t1 AT2G40150 27.957 372 229 12 223 573 71 424 1.20e-34 136
MS.gene004903.t1 AT5G01360 26.776 366 221 12 223 567 36 375 7.55e-34 133
MS.gene004903.t1 AT2G42570 26.913 379 235 11 198 570 22 364 9.19e-34 132
MS.gene004903.t1 AT5G58600 28.108 370 215 12 220 570 63 400 1.06e-33 133
MS.gene004903.t1 AT5G01360 26.776 366 221 12 223 567 92 431 1.61e-33 133
MS.gene004903.t1 AT1G78710 28.184 369 209 16 212 566 26 352 4.46e-32 127
MS.gene004903.t1 AT3G55990 27.586 377 216 15 223 572 140 486 1.52e-30 125
MS.gene004903.t1 AT3G62390 54.639 97 43 1 223 318 138 234 1.34e-29 121
MS.gene004903.t1 AT5G20590 33.333 249 142 7 222 456 140 378 3.04e-29 119
MS.gene004903.t1 AT5G19160 29.675 246 155 6 221 455 97 335 2.09e-28 117
MS.gene004903.t1 AT2G38320 27.907 344 193 16 253 570 7 321 1.56e-27 114
MS.gene004903.t1 AT3G06080 29.644 253 148 7 221 456 101 340 6.49e-27 112
MS.gene004903.t1 AT2G40160 29.680 219 146 5 189 401 44 260 1.12e-26 111
MS.gene004903.t1 AT5G64470 29.057 265 152 10 223 466 55 304 1.23e-25 108
MS.gene004903.t1 AT5G64470 29.057 265 152 10 223 466 55 304 1.68e-25 107
MS.gene004903.t1 AT2G31110 35.484 186 105 6 215 394 35 211 3.94e-25 105
MS.gene004903.t1 AT2G30900 34.286 175 98 7 223 390 43 207 4.21e-25 105
MS.gene004903.t1 AT5G06230 28.464 267 161 9 212 458 51 307 2.78e-22 98.2
MS.gene004903.t1 AT1G78710 41.441 111 56 3 208 311 10 118 2.15e-21 95.5
MS.gene004903.t1 AT5G58600 44.086 93 51 1 220 311 63 155 5.17e-21 94.0
MS.gene004903.t1 AT3G14850 26.224 286 158 13 294 566 2 247 4.56e-15 75.9
MS.gene004903.t1 AT2G34070 24.825 286 160 14 294 566 2 245 1.47e-12 68.6

Find 169 sgRNAs with CRISPR-Local

Find 387 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACGTTTAGTGATCTTATT+TGG 0.114557 1.4:-63025995 None:intergenic
TCAGGCTTCTTTACTGATTC+TGG 0.163701 1.4:-63021915 None:intergenic
AGGACAACCACGTCAAAATT+TGG 0.190228 1.4:-63025527 None:intergenic
TCAATAGAAGCAACATTTAT+AGG 0.210296 1.4:-63021474 None:intergenic
TAAATCGAAGTTGACGTTAA+TGG 0.229432 1.4:+63025910 MS.gene004903:CDS
ACCATCCAAGACCACTTTCT+TGG 0.251239 1.4:+63021313 MS.gene004903:CDS
CCGATTGGTGCCACGTTTCA+TGG 0.257508 1.4:+63021402 MS.gene004903:CDS
CCAAACGAAGTCGTGGGTTT+TGG 0.277729 1.4:-63021660 None:intergenic
TGTGGCGGTGGCCTTCCATC+TGG 0.278954 1.4:-63026019 None:intergenic
TGCCCCTGACCCGAAGTTAA+TGG 0.289127 1.4:+63025496 MS.gene004903:CDS
ATGGTCATCCTGGGCCTTAC+AGG 0.297812 1.4:+63025963 MS.gene004903:CDS
TTACGATTTCCCCGATTCTT+TGG 0.311708 1.4:-63025347 None:intergenic
GCATGACCCACCGGTGTTCC+AGG 0.323014 1.4:-63025774 None:intergenic
GACGTGGTTGTCCTTTCTTC+CGG 0.330743 1.4:+63025536 MS.gene004903:CDS
TCTAATACCACCCGTCAAAT+TGG 0.331043 1.4:-63021787 None:intergenic
ATGCATGAGCAACAGGTTAC+AGG 0.340638 1.4:+63025857 MS.gene004903:CDS
GGGAAGACCTTGGCTTTCAT+TGG 0.343839 1.4:+63024247 MS.gene004903:CDS
AACTTCAAGTGCAACTGTTT+CGG 0.351632 1.4:+63021743 MS.gene004903:CDS
TTAGTGATCTTATTTGGGTC+AGG 0.357250 1.4:-63025989 None:intergenic
CACGTTTAGTGATCTTATTT+GGG 0.366019 1.4:-63025994 None:intergenic
TACACAACATTGATTCCATT+TGG 0.372534 1.4:-63024288 None:intergenic
GCCTGTTGCACTTGGTGAAC+TGG 0.373204 1.4:+63025811 MS.gene004903:CDS
TTGTCCTTTCTTCCGGTCAT+TGG 0.374487 1.4:+63025543 MS.gene004903:CDS
TCTGAGAAGTTAGATGTATC+TGG 0.378480 1.4:+63021447 MS.gene004903:CDS
GTGATCTGTACCATGGGAAT+TGG 0.379220 1.4:+63024050 MS.gene004903:CDS
TGCAGAATTGCCAGGGTAAT+GGG 0.379873 1.4:+63024131 MS.gene004903:CDS
CCAAAACCCACGACTTCGTT+TGG 0.382102 1.4:+63021660 MS.gene004903:CDS
TGCTTGCACTGGTGCATGCC+AGG 0.387421 1.4:+63026046 MS.gene004903:CDS
TTCATCTGCTTGGACTTGTC+TGG 0.388587 1.4:-63025626 None:intergenic
GGACAACCACGTCAAAATTT+GGG 0.391976 1.4:-63025526 None:intergenic
TTCCAAGACAAGTTCATTCC+AGG 0.392884 1.4:-63026080 None:intergenic
ACCAGTTCACCAAGTGCAAC+AGG 0.396065 1.4:-63025812 None:intergenic
GGATATGTTCCATTAACTTC+GGG 0.398865 1.4:-63025505 None:intergenic
TGTTCCATTAACTTCGGGTC+AGG 0.405587 1.4:-63025500 None:intergenic
TGCCGGTTCTTCCAATTTGA+CGG 0.407032 1.4:+63021776 MS.gene004903:CDS
TACCGACGTGATGGTCATCC+TGG 0.407245 1.4:+63025953 MS.gene004903:CDS
CTGTAATGATAGTCCGGATA+TGG 0.407364 1.4:+63025399 MS.gene004903:CDS
GTTGTTGACCTTCATCTGCT+TGG 0.410264 1.4:-63025636 None:intergenic
AGATGGAAGGCCACCGCCAC+AGG 0.412614 1.4:+63026021 MS.gene004903:CDS
TTTGGGTCAGGGCTCCTGTA+AGG 0.416109 1.4:-63025977 None:intergenic
TGGTCATTTGAAACCGTAGA+AGG 0.416358 1.4:-63021822 None:intergenic
CCGGCATTGGATGCGTTGTC+AGG 0.417008 1.4:-63021933 None:intergenic
CTGACAAAGATTATGAGAAT+TGG 0.417959 1.4:+63024158 MS.gene004903:CDS
ACCCGTCAAATTGGAAGAAC+CGG 0.418466 1.4:-63021778 None:intergenic
ATGCAGAATTGCCAGGGTAA+TGG 0.425214 1.4:+63024130 MS.gene004903:CDS
CTCATAATGATCTGGTGAAT+AGG 0.425680 1.4:-63025744 None:intergenic
ACAATCCAAGAAAGTGGTCT+TGG 0.428546 1.4:-63021318 None:intergenic
AATGCCGGTTCAGTTAATTC+AGG 0.433625 1.4:+63021948 MS.gene004903:CDS
AAATACGATGCATGAGCAAC+AGG 0.433872 1.4:+63025850 MS.gene004903:CDS
GTGGCGGTGGCCTTCCATCT+GGG 0.434365 1.4:-63026018 None:intergenic
TATCTTGAATAACGAGATAG+TGG 0.435893 1.4:+63025586 MS.gene004903:CDS
GAAGTCGTGGAGGTTTCCTT+TGG 0.438635 1.4:-63021867 None:intergenic
AACACCGGTGGGTCATGCAC+TGG 0.441439 1.4:+63025779 MS.gene004903:CDS
ACTTGTGAATTTGCTTGAGC+AGG 0.443123 1.4:-63021714 None:intergenic
CAATTCTCATAATCTTTGTC+AGG 0.443282 1.4:-63024157 None:intergenic
TTCTGCATCTGTGTCAATAC+AGG 0.448339 1.4:-63024115 None:intergenic
TGAATTAACTGAACCGGCAT+TGG 0.450829 1.4:-63021946 None:intergenic
AGGTAGAGGTACCAAAGAAT+CGG 0.451259 1.4:+63025336 MS.gene004903:intron
ATCATTATGAGGGTGGAGCC+TGG 0.451662 1.4:+63025756 MS.gene004903:CDS
GCCGGTTCTTCCAATTTGAC+GGG 0.453765 1.4:+63021777 MS.gene004903:CDS
CTTGGTGAACTGGTAGAAAA+CGG 0.458499 1.4:+63025821 MS.gene004903:CDS
GGTAGAGGTACCAAAGAATC+GGG 0.459715 1.4:+63025337 MS.gene004903:intron
TACCTGGAATGAACTTGTCT+TGG 0.460482 1.4:+63026078 MS.gene004903:CDS
ATTGCGAGACCTTTGTAAGT+TGG 0.460750 1.4:-63025713 None:intergenic
TTCAGTAGCTCGAAACCAAA+TGG 0.465522 1.4:+63024273 MS.gene004903:CDS
GGGATATGTTCCATTAACTT+CGG 0.466003 1.4:-63025506 None:intergenic
CCATGAAACGTGGCACCAAT+CGG 0.466696 1.4:-63021402 None:intergenic
TGCCAGGTCCTGTCGATACC+TGG 0.468729 1.4:+63026062 MS.gene004903:CDS
TCAGGGCTCCTGTAAGGCCC+AGG 0.476391 1.4:-63025971 None:intergenic
TGATCTGTACCATGGGAATT+GGG 0.480897 1.4:+63024051 MS.gene004903:CDS
GTAACCTGAATTAACTGAAC+CGG 0.483044 1.4:-63021952 None:intergenic
ACAAAGGTCTCGCAATTGTT+CGG 0.487631 1.4:+63025720 MS.gene004903:CDS
TTGAGCAGGCAAACTAGTAT+TGG 0.488542 1.4:-63021700 None:intergenic
GAGGGTGGAGCCTGGAACAC+CGG 0.488669 1.4:+63025764 MS.gene004903:CDS
GCAACTGTTTCGGTTGAAGC+AGG 0.488742 1.4:+63021753 MS.gene004903:CDS
CAAACCAATGACCGGAAGAA+AGG 0.492984 1.4:-63025547 None:intergenic
GACACAGATGCAGAATTGCC+AGG 0.493240 1.4:+63024123 MS.gene004903:CDS
TGCAAGCAATCCTGTGGCGG+TGG 0.493660 1.4:-63026031 None:intergenic
TTGGTGAACTGGTAGAAAAC+GGG 0.495173 1.4:+63025822 MS.gene004903:CDS
GGTGGAGCCTGGAACACCGG+TGG 0.496840 1.4:+63025767 MS.gene004903:CDS
TTCCGAGTTTGAAGTGGCAT+CGG 0.499356 1.4:-63021559 None:intergenic
GCTCCACCCTCATAATGATC+TGG 0.502988 1.4:-63025752 None:intergenic
TCGTGGGATGTCACACTGAA+AGG 0.503362 1.4:-63024191 None:intergenic
TAGTGATCTTATTTGGGTCA+GGG 0.503772 1.4:-63025988 None:intergenic
GTTCTTGTTTCATCGCCGAT+TGG 0.503785 1.4:+63021387 MS.gene004903:CDS
GAATTGGGTACATGATCCAT+TGG 0.511270 1.4:+63024066 MS.gene004903:CDS
ATCACTAAACGTGGCCCAGA+TGG 0.514346 1.4:+63026004 MS.gene004903:CDS
GTTCCATTAACTTCGGGTCA+GGG 0.514562 1.4:-63025499 None:intergenic
CGCCACAGGATTGCTTGCAC+TGG 0.514703 1.4:+63026035 MS.gene004903:CDS
GTTTCGGTTGAAGCAGGTGC+CGG 0.515679 1.4:+63021759 MS.gene004903:CDS
CAAGCCATGAGGACCATATC+CGG 0.516438 1.4:-63025412 None:intergenic
CCGCATCTGTAATGATAGTC+CGG 0.516536 1.4:+63025393 MS.gene004903:CDS
CGTGGGATGTCACACTGAAA+GGG 0.519480 1.4:-63024190 None:intergenic
CTATTCACCAGATCATTATG+AGG 0.520724 1.4:+63025745 MS.gene004903:CDS
TGGAGCTTATCCACACCAGC+TGG 0.522748 1.4:-63025467 None:intergenic
AAAACAACAATCCAAGAAAG+TGG 0.527041 1.4:-63021324 None:intergenic
AGATAGTGGGAGGACAGTTA+TGG 0.528309 1.4:+63025600 MS.gene004903:CDS
TTAGATTCACAATCTTCCAC+TGG 0.528340 1.4:+63021510 MS.gene004903:CDS
AACCGATGCCACTTCAAACT+CGG 0.537883 1.4:+63021557 MS.gene004903:CDS
CCAGCTGGAGCATAATCAAA+TGG 0.539143 1.4:-63025452 None:intergenic
CATGTATTGTTTGTGTAAAG+TGG 0.539629 1.4:-63024091 None:intergenic
AATGTTGTGTATTCTGTGGC+AGG 0.542105 1.4:+63024300 MS.gene004903:CDS
GTCTACTTCCGAGTTTGAAG+TGG 0.543365 1.4:-63021565 None:intergenic
GTTTGGCAATAGTGTAGATA+CGG 0.543709 1.4:+63021677 MS.gene004903:CDS
TCGGGTCAGGGGCATCAAGA+TGG 0.543725 1.4:-63025487 None:intergenic
TTCCAGGTATCGACAGGACC+TGG 0.544847 1.4:-63026064 None:intergenic
TTCCATTAACTTCGGGTCAG+GGG 0.544917 1.4:-63025498 None:intergenic
ACACCGGTGGGTCATGCACT+GGG 0.546027 1.4:+63025780 MS.gene004903:CDS
CCTGACAACGCATCCAATGC+CGG 0.546333 1.4:+63021933 MS.gene004903:CDS
CTTCCCAGTGCATGACCCAC+CGG 0.549025 1.4:-63025783 None:intergenic
CCATTTGATTATGCTCCAGC+TGG 0.552386 1.4:+63025452 MS.gene004903:CDS
CTATAATCACACCACCGGAC+TGG 0.556126 1.4:-63021842 None:intergenic
ACGGTTTCAAATGACCAGTC+CGG 0.563196 1.4:+63021828 MS.gene004903:CDS
GCTGATGAGAGGGAAGACCT+TGG 0.564264 1.4:+63024237 MS.gene004903:CDS
TCCAAGAAAGTGGTCTTGGA+TGG 0.565929 1.4:-63021314 None:intergenic
AATTGGGTACATGATCCATT+GGG 0.567737 1.4:+63024067 MS.gene004903:CDS
AGACAAGTCCAAGCAGATGA+AGG 0.568935 1.4:+63025628 MS.gene004903:CDS
GTCATTTGAAACCGTAGAAG+GGG 0.570128 1.4:-63021820 None:intergenic
TGTCAGGCCTCCCATTACCC+TGG 0.571687 1.4:-63024141 None:intergenic
AGTTCATTCCAGGTATCGAC+AGG 0.581656 1.4:-63026070 None:intergenic
GTGGAGCCTGGAACACCGGT+GGG 0.582467 1.4:+63025768 MS.gene004903:CDS
ACTATTGCCAAACGAAGTCG+TGG 0.582517 1.4:-63021667 None:intergenic
GAAGATTGTGAATCTAAAGA+CGG 0.584346 1.4:-63021504 None:intergenic
GGTCATTTGAAACCGTAGAA+GGG 0.584794 1.4:-63021821 None:intergenic
AAGATTATGAGAATTGGCGA+TGG 0.585427 1.4:+63024164 MS.gene004903:CDS
AAGGTTAAGCCTGTTGCACT+TGG 0.585969 1.4:+63025803 MS.gene004903:CDS
CTAAACGTGGCCCAGATGGA+AGG 0.586407 1.4:+63026008 MS.gene004903:CDS
TGAATCTCCAATGAAAGCCA+AGG 0.588688 1.4:-63024254 None:intergenic
ACCGACGTGATGGTCATCCT+GGG 0.593704 1.4:+63025954 MS.gene004903:CDS
GCGTTTCAATACCGACGTGA+TGG 0.594228 1.4:+63025944 MS.gene004903:CDS
TTCTGGAACAGCTGTTAATG+TGG 0.596453 1.4:-63021898 None:intergenic
TGTGGAATTATCAGAAGTCG+TGG 0.596523 1.4:-63021880 None:intergenic
CTGCTTAGCAAACCAATGAC+CGG 0.598348 1.4:-63025555 None:intergenic
TGATTATGCTCCAGCTGGTG+TGG 0.603990 1.4:+63025457 MS.gene004903:CDS
TGGTGTGATTATAGCACCAA+AGG 0.606346 1.4:+63021851 MS.gene004903:CDS
TAGTCCGGATATGGTCCTCA+TGG 0.607259 1.4:+63025408 MS.gene004903:CDS
CACCAGTGCAAGCAATCCTG+TGG 0.608621 1.4:-63026037 None:intergenic
TTATTGACATCCTCGCTCGT+TGG 0.611402 1.4:-63021615 None:intergenic
CGGTGGGTCATGCACTGGGA+AGG 0.611769 1.4:+63025784 MS.gene004903:CDS
GGTTCTTCCAATTTGACGGG+TGG 0.614017 1.4:+63021780 MS.gene004903:CDS
CAATAGTAAGTCTAGTTCTG+TGG 0.616322 1.4:+63021587 MS.gene004903:CDS
TGGTGCTATAATCACACCAC+CGG 0.617286 1.4:-63021847 None:intergenic
CAGTGCAAGCAATCCTGTGG+CGG 0.618270 1.4:-63026034 None:intergenic
TTTGTGTAAAGTGGTCCCAA+TGG 0.618822 1.4:-63024082 None:intergenic
TAGTGGGAGGACAGTTATGG+TGG 0.622969 1.4:+63025603 MS.gene004903:CDS
ATCATCAAGAGAGAATATGA+AGG 0.626533 1.4:+63026103 MS.gene004903:CDS
TCACCAGATCATTATGAGGG+TGG 0.628408 1.4:+63025749 MS.gene004903:CDS
ATTGCTATCACTAGTACCAG+TGG 0.629797 1.4:-63021526 None:intergenic
TAGGCTGTGATCTGTACCAT+GGG 0.633271 1.4:+63024044 MS.gene004903:intron
GCTACACATCCAACTTACAA+AGG 0.636013 1.4:+63025704 MS.gene004903:CDS
ACACAGATGCAGAATTGCCA+GGG 0.636339 1.4:+63024124 MS.gene004903:CDS
ATCAAGAGAGAATATGAAGG+TGG 0.637532 1.4:+63026106 MS.gene004903:CDS
ATCTTGAATAACGAGATAGT+GGG 0.646579 1.4:+63025587 MS.gene004903:CDS
TATTCACCAGATCATTATGA+GGG 0.649367 1.4:+63025746 MS.gene004903:CDS
TGTGGAACTTCCAACGAGCG+AGG 0.651120 1.4:+63021605 MS.gene004903:CDS
TTGAATAACGAGATAGTGGG+AGG 0.661822 1.4:+63025590 MS.gene004903:CDS
CCGGACTATCATTACAGATG+CGG 0.665544 1.4:-63025393 None:intergenic
TCATTTGAAACCGTAGAAGG+GGG 0.666824 1.4:-63021819 None:intergenic
CCAAATAAGATCACTAAACG+TGG 0.667609 1.4:+63025995 MS.gene004903:CDS
GATCATGTACCCAATTCCCA+TGG 0.672337 1.4:-63024060 None:intergenic
GTTTCAAATGACCAGTCCGG+TGG 0.677402 1.4:+63021831 MS.gene004903:CDS
GTAGGCTGTGATCTGTACCA+TGG 0.685036 1.4:+63024043 MS.gene004903:intron
CTATTGCCAAACGAAGTCGT+GGG 0.691219 1.4:-63021666 None:intergenic
GGAATTATCAGAAGTCGTGG+AGG 0.703782 1.4:-63021877 None:intergenic
AATCAATGTTGTGTATTCTG+TGG 0.709727 1.4:+63024296 MS.gene004903:CDS
AGAATTGCCAGGGTAATGGG+AGG 0.713659 1.4:+63024134 MS.gene004903:CDS
CGTCACTTTGACAAGCCATG+AGG 0.722152 1.4:-63025423 None:intergenic
GTAGAGGTACCAAAGAATCG+GGG 0.738063 1.4:+63025338 MS.gene004903:CDS
GCCCAGGATGACCATCACGT+CGG 0.739105 1.4:-63025955 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTAAAAAGAGAATAT+GGG - chr1.4:63022352-63022371 None:intergenic 10.0%
!! TAAAAATTAAAAAGAGAATA+TGG - chr1.4:63022353-63022372 None:intergenic 10.0%
!!! TTTCTTTTTATTAACATTTA+TGG - chr1.4:63024747-63024766 None:intergenic 10.0%
!! AAAAATTTCTTATTGTAAAC+AGG + chr1.4:63023947-63023966 MS.gene004903:intron 15.0%
!! AACAAATATAAAATACAAAC+AGG - chr1.4:63024640-63024659 None:intergenic 15.0%
!! ATAAAATGATTTAGAGATTA+TGG + chr1.4:63024367-63024386 MS.gene004903:intron 15.0%
!! CATATAAACATTTCTTTATT+AGG + chr1.4:63024943-63024962 MS.gene004903:intron 15.0%
!! CTCTTATTATTATTGTATTA+TGG + chr1.4:63024691-63024710 MS.gene004903:intron 15.0%
!! TTAGATAAAATAGTAATGTT+GGG - chr1.4:63022421-63022440 None:intergenic 15.0%
!! TTATTATTATTAGGTAAAAG+AGG + chr1.4:63024812-63024831 MS.gene004903:intron 15.0%
!!! ATATGCAAAGATATTATTTT+AGG + chr1.4:63025369-63025388 MS.gene004903:CDS 15.0%
!!! GTTTGTATTTTATATTTGTT+TGG + chr1.4:63024640-63024659 MS.gene004903:intron 15.0%
!!! TATTTTATATTTGTTTGGTT+TGG + chr1.4:63024645-63024664 MS.gene004903:intron 15.0%
!! ATTTCTTTATTAGGTAAAAG+AGG + chr1.4:63024952-63024971 MS.gene004903:intron 20.0%
!! GTTAGATAAAATAGTAATGT+TGG - chr1.4:63022422-63022441 None:intergenic 20.0%
!! TAGATAAAATAGTAATGTTG+GGG - chr1.4:63022420-63022439 None:intergenic 20.0%
!! TATTCATTTACACATACATA+GGG + chr1.4:63025221-63025240 MS.gene004903:intron 20.0%
!!! AAAAGACTAGTTTATTAAGT+GGG + chr1.4:63023107-63023126 MS.gene004903:intron 20.0%
!!! ACATGCATTTTTCTTTTTAT+TGG - chr1.4:63025082-63025101 None:intergenic 20.0%
!!! ACTTAATAAACTAGTCTTTT+GGG - chr1.4:63023107-63023126 None:intergenic 20.0%
!!! ATTTGATCCTAGAAAATTTT+TGG + chr1.4:63024213-63024232 MS.gene004903:CDS 20.0%
!!! CTTTTTATTGGAATATACTT+TGG - chr1.4:63025070-63025089 None:intergenic 20.0%
!!! TGATGTATAATTCAAAGTTT+TGG + chr1.4:63023769-63023788 MS.gene004903:intron 20.0%
! AAAACCATTTCATTATGAAC+CGG - chr1.4:63025169-63025188 None:intergenic 25.0%
! AAAAGAGATATCCTTTACAA+AGG - chr1.4:63022283-63022302 None:intergenic 25.0%
! AAAGAGATATCCTTTACAAA+GGG - chr1.4:63022282-63022301 None:intergenic 25.0%
! AAGTAAATGAGAATGAAATC+AGG + chr1.4:63024865-63024884 MS.gene004903:intron 25.0%
! ATAGTAGTACAAAACAAGAA+TGG - chr1.4:63022037-63022056 None:intergenic 25.0%
! ATTATGAACTCTCTAACAAT+AGG + chr1.4:63024438-63024457 MS.gene004903:intron 25.0%
! ATTATTAGGTAAAAGAGGAT+GGG + chr1.4:63024817-63024836 MS.gene004903:intron 25.0%
! ATTTAGTTGAGTACCTTAAT+CGG + chr1.4:63023009-63023028 MS.gene004903:intron 25.0%
! CAAAATTCCAGTAGATAAAA+GGG - chr1.4:63023163-63023182 None:intergenic 25.0%
! CAAAGACCAAAATAAAATAG+AGG - chr1.4:63022734-63022753 None:intergenic 25.0%
! GAGATGTGAATTTACTTTAT+TGG - chr1.4:63024584-63024603 None:intergenic 25.0%
! GTATTCATTTACACATACAT+AGG + chr1.4:63025220-63025239 MS.gene004903:intron 25.0%
! TAGAAGCTTAACTGAAAATA+TGG + chr1.4:63025306-63025325 MS.gene004903:intron 25.0%
! TATTATTAGGTAAAAGAGGA+TGG + chr1.4:63024816-63024835 MS.gene004903:intron 25.0%
! TCAATAGAAGCAACATTTAT+AGG - chr1.4:63021477-63021496 None:intergenic 25.0%
! TTAAAAAGAGAATATGGGAA+TGG - chr1.4:63022347-63022366 None:intergenic 25.0%
! TTAATTAGCAACTGAATCAA+CGG + chr1.4:63023404-63023423 MS.gene004903:intron 25.0%
! TTATGAACTCTCTAACAATA+GGG + chr1.4:63024439-63024458 MS.gene004903:intron 25.0%
! TTTAAAAAACAAGCTAGTGT+AGG - chr1.4:63021993-63022012 None:intergenic 25.0%
!! ACTGAAAATATGGTATTTTC+AGG + chr1.4:63025316-63025335 MS.gene004903:intron 25.0%
!! CAACATTTCTTTTCTTAGTT+TGG + chr1.4:63025019-63025038 MS.gene004903:intron 25.0%
!! CTTTGTTTCAGTTATCAATT+GGG + chr1.4:63022749-63022768 MS.gene004903:intron 25.0%
!! TCTTTGTTTCAGTTATCAAT+TGG + chr1.4:63022748-63022767 MS.gene004903:intron 25.0%
!!! AATTTTGCTTTTGTACTTCT+GGG + chr1.4:63023431-63023450 MS.gene004903:intron 25.0%
!!! ACGTTTCATGGATATTTTTA+CGG + chr1.4:63021414-63021433 MS.gene004903:CDS 25.0%
!!! CAAAAGACTAGTTTATTAAG+TGG + chr1.4:63023106-63023125 MS.gene004903:intron 25.0%
!!! CACTTAATAAACTAGTCTTT+TGG - chr1.4:63023108-63023127 None:intergenic 25.0%
!!! CACTTTTATCTAGTTTATGT+GGG + chr1.4:63022871-63022890 MS.gene004903:intron 25.0%
!!! CTTGTTTTTTAAATGCTTCA+TGG + chr1.4:63022000-63022019 MS.gene004903:intron 25.0%
!!! GAGTAACCTCTATTTTATTT+TGG + chr1.4:63022725-63022744 MS.gene004903:intron 25.0%
!!! GCATCAAAAATTGTTTTATG+TGG + chr1.4:63025118-63025137 MS.gene004903:intron 25.0%
!!! TAATTTTGCTTTTGTACTTC+TGG + chr1.4:63023430-63023449 MS.gene004903:intron 25.0%
AAAACAACAATCCAAGAAAG+TGG - chr1.4:63021327-63021346 None:intergenic 30.0%
AAACCATTTCATTATGAACC+GGG - chr1.4:63025168-63025187 None:intergenic 30.0%
AAATGCAGAAATTGTTGTAC+TGG - chr1.4:63024909-63024928 None:intergenic 30.0%
AATCAATGTTGTGTATTCTG+TGG + chr1.4:63024296-63024315 MS.gene004903:CDS 30.0%
ATCATCAAGAGAGAATATGA+AGG + chr1.4:63026103-63026122 MS.gene004903:CDS 30.0%
ATCTTGAATAACGAGATAGT+GGG + chr1.4:63025587-63025606 MS.gene004903:CDS 30.0%
CAATGACAGCATCATTTATT+AGG + chr1.4:63023056-63023075 MS.gene004903:intron 30.0%
CAATTCTCATAATCTTTGTC+AGG - chr1.4:63024160-63024179 None:intergenic 30.0%
CATGTATTGTTTGTGTAAAG+TGG - chr1.4:63024094-63024113 None:intergenic 30.0%
CCAAAATTCCAGTAGATAAA+AGG - chr1.4:63023164-63023183 None:intergenic 30.0%
CTGACAAAGATTATGAGAAT+TGG + chr1.4:63024158-63024177 MS.gene004903:CDS 30.0%
GAAGATTGTGAATCTAAAGA+CGG - chr1.4:63021507-63021526 None:intergenic 30.0%
GGAACGTAATCAAATTGATT+TGG + chr1.4:63024973-63024992 MS.gene004903:intron 30.0%
GTAAAAATATCCATGAAACG+TGG - chr1.4:63021415-63021434 None:intergenic 30.0%
GTACTAAAAACAAGCTAAAG+TGG - chr1.4:63022698-63022717 None:intergenic 30.0%
GTATTACATGAAAAGTCTGA+GGG + chr1.4:63022507-63022526 MS.gene004903:intron 30.0%
TAAATCGAAGTTGACGTTAA+TGG + chr1.4:63025910-63025929 MS.gene004903:CDS 30.0%
TATCAATTGGGCTAATTAAG+TGG + chr1.4:63022761-63022780 MS.gene004903:intron 30.0%
TATCTTGAATAACGAGATAG+TGG + chr1.4:63025586-63025605 MS.gene004903:CDS 30.0%
TATTCACCAGATCATTATGA+GGG + chr1.4:63025746-63025765 MS.gene004903:CDS 30.0%
TATTGGAATATACTTTGGCT+GGG - chr1.4:63025065-63025084 None:intergenic 30.0%
TCTAACTTCAAACTGTGATT+AGG + chr1.4:63022436-63022455 MS.gene004903:intron 30.0%
TGTATTACATGAAAAGTCTG+AGG + chr1.4:63022506-63022525 MS.gene004903:intron 30.0%
TGTATTATTGCAAACTGAAC+TGG + chr1.4:63022223-63022242 MS.gene004903:intron 30.0%
TTATTAGGTAAAAGAGGATG+GGG + chr1.4:63024818-63024837 MS.gene004903:intron 30.0%
TTATTGGAATATACTTTGGC+TGG - chr1.4:63025066-63025085 None:intergenic 30.0%
TTCTTATTGTAAACAGGTGA+CGG + chr1.4:63023953-63023972 MS.gene004903:intron 30.0%
TTTACAAAGGGAAAACTCTT+GGG - chr1.4:63022270-63022289 None:intergenic 30.0%
TTTCATTCTCATTTACTTCC+TGG - chr1.4:63024863-63024882 None:intergenic 30.0%
! ATCAGCTCCAAAAATTTTCT+AGG - chr1.4:63024223-63024242 None:intergenic 30.0%
! CACGTTTAGTGATCTTATTT+GGG - chr1.4:63025997-63026016 None:intergenic 30.0%
! CATTTACAGTTTGCTTTGTT+TGG + chr1.4:63024546-63024565 MS.gene004903:intron 30.0%
! CCTTTTATCTACTGGAATTT+TGG + chr1.4:63023161-63023180 MS.gene004903:intron 30.0%
! CTTGTGTTGCTATATATGTT+TGG + chr1.4:63023877-63023896 MS.gene004903:intron 30.0%
! GTCAATTTGATAGTTGTACA+TGG - chr1.4:63022312-63022331 None:intergenic 30.0%
! TTCTTTACTTCACTCTCTTT+TGG + chr1.4:63022086-63022105 MS.gene004903:intron 30.0%
! TTGTCTATATTTTTCTCCGA+GGG + chr1.4:63022647-63022666 MS.gene004903:intron 30.0%
! TTTATTTGTAGCCTTTTCCA+TGG - chr1.4:63025894-63025913 None:intergenic 30.0%
!! CATGGATATTTTTACGGTAT+AGG + chr1.4:63021420-63021439 MS.gene004903:CDS 30.0%
!! GCACTTTTATCTAGTTTATG+TGG + chr1.4:63022870-63022889 MS.gene004903:intron 30.0%
!! TACACAACATTGATTCCATT+TGG - chr1.4:63024291-63024310 None:intergenic 30.0%
!!! AATAAACTAGTCTTTTGGGT+TGG - chr1.4:63023103-63023122 None:intergenic 30.0%
!!! AATATGGTATTTTCAGGTAG+AGG + chr1.4:63025322-63025341 MS.gene004903:intron 30.0%
!!! AATTTTCTAGGATCAAATCG+TGG - chr1.4:63024211-63024230 None:intergenic 30.0%
!!! ATGAGTGTTTTTTTGTTAGG+TGG - chr1.4:63022468-63022487 None:intergenic 30.0%
!!! ATTTTCTAGGATCAAATCGT+GGG - chr1.4:63024210-63024229 None:intergenic 30.0%
!!! GCTATGAGTGTTTTTTTGTT+AGG - chr1.4:63022471-63022490 None:intergenic 30.0%
!!! TCTTGGATTGTTGTTTTAGT+AGG + chr1.4:63021330-63021349 MS.gene004903:CDS 30.0%
AACTTCAAGTGCAACTGTTT+CGG + chr1.4:63021743-63021762 MS.gene004903:CDS 35.0%
AAGAGAATATGGGAATGGAA+AGG - chr1.4:63022342-63022361 None:intergenic 35.0%
AAGATTATGAGAATTGGCGA+TGG + chr1.4:63024164-63024183 MS.gene004903:CDS 35.0%
AATTGGGTACATGATCCATT+GGG + chr1.4:63024067-63024086 MS.gene004903:CDS 35.0%
ATACCCGGTTCATAATGAAA+TGG + chr1.4:63025162-63025181 MS.gene004903:intron 35.0%
ATCAAATGCATGCTGTTGAA+CGG - chr1.4:63025195-63025214 None:intergenic 35.0%
ATCAAGAGAGAATATGAAGG+TGG + chr1.4:63026106-63026125 MS.gene004903:CDS 35.0%
ATTTCATTATGAACCGGGTA+TGG - chr1.4:63025163-63025182 None:intergenic 35.0%
CCAAATAAGATCACTAAACG+TGG + chr1.4:63025995-63026014 MS.gene004903:CDS 35.0%
CCACGTTTAGTGATCTTATT+TGG - chr1.4:63025998-63026017 None:intergenic 35.0%
CCATGCAAAACAGATCAATA+AGG - chr1.4:63024344-63024363 None:intergenic 35.0%
CTAAAAACAAGCTAAAGTGG+TGG - chr1.4:63022695-63022714 None:intergenic 35.0%
CTATTCACCAGATCATTATG+AGG + chr1.4:63025745-63025764 MS.gene004903:CDS 35.0%
CTCATAATGATCTGGTGAAT+AGG - chr1.4:63025747-63025766 None:intergenic 35.0%
CTGTTCATTTCAGTTTCTCT+AGG - chr1.4:63022174-63022193 None:intergenic 35.0%
CTTTACAAAGGGAAAACTCT+TGG - chr1.4:63022271-63022290 None:intergenic 35.0%
GGATATGTTCCATTAACTTC+GGG - chr1.4:63025508-63025527 None:intergenic 35.0%
GGGATATGTTCCATTAACTT+CGG - chr1.4:63025509-63025528 None:intergenic 35.0%
GGTGATTTATTAGGTAAACC+AGG + chr1.4:63024842-63024861 MS.gene004903:intron 35.0%
GTAACCTGAATTAACTGAAC+CGG - chr1.4:63021955-63021974 None:intergenic 35.0%
GTACTCAACTAAATACCGAT+TGG - chr1.4:63023003-63023022 None:intergenic 35.0%
GTTGAATTCACAGTAGTTTC+AGG + chr1.4:63023722-63023741 MS.gene004903:intron 35.0%
GTTTGGCAATAGTGTAGATA+CGG + chr1.4:63021677-63021696 MS.gene004903:CDS 35.0%
TATTAGGACTTATGTCCATG+AGG + chr1.4:63023072-63023091 MS.gene004903:intron 35.0%
TATTGTCCATTCTGTTGTGT+AGG + chr1.4:63024025-63024044 MS.gene004903:intron 35.0%
TCTGAGAAGTTAGATGTATC+TGG + chr1.4:63021447-63021466 MS.gene004903:CDS 35.0%
TTAGATTCACAATCTTCCAC+TGG + chr1.4:63021510-63021529 MS.gene004903:CDS 35.0%
TTCATGCATTTGAAGGATTC+AGG + chr1.4:63022572-63022591 MS.gene004903:intron 35.0%
! AAAATGCATGTTTTGCCTCT+TGG + chr1.4:63025091-63025110 MS.gene004903:intron 35.0%
! CAAGAGTTTTCCCTTTGTAA+AGG + chr1.4:63022269-63022288 MS.gene004903:intron 35.0%
! CCTTATTGATCTGTTTTGCA+TGG + chr1.4:63024341-63024360 MS.gene004903:intron 35.0%
! GGTATTGTCATGATGATGTT+TGG + chr1.4:63023334-63023353 MS.gene004903:intron 35.0%
! GTTGTCTATATTTTTCTCCG+AGG + chr1.4:63022646-63022665 MS.gene004903:intron 35.0%
! GTTTGAAATTACTCTGTGTG+AGG + chr1.4:63023991-63024010 MS.gene004903:intron 35.0%
! TAGTGATCTTATTTGGGTCA+GGG - chr1.4:63025991-63026010 None:intergenic 35.0%
! TTAGTGATCTTATTTGGGTC+AGG - chr1.4:63025992-63026011 None:intergenic 35.0%
!! ACATATCCCAAATTTTGACG+TGG + chr1.4:63025520-63025539 MS.gene004903:CDS 35.0%
!! CAATAGTAAGTCTAGTTCTG+TGG + chr1.4:63021587-63021606 MS.gene004903:CDS 35.0%
!!! AAATTTTTGGAGCTGATGAG+AGG + chr1.4:63024226-63024245 MS.gene004903:CDS 35.0%
!!! AATTTTTGGAGCTGATGAGA+GGG + chr1.4:63024227-63024246 MS.gene004903:CDS 35.0%
AAAAGACCAGTCCATTAGGT+TGG + chr1.4:63022819-63022838 MS.gene004903:intron 40.0%
AAATACGATGCATGAGCAAC+AGG + chr1.4:63025850-63025869 MS.gene004903:CDS 40.0%
AATGTTGTGTATTCTGTGGC+AGG + chr1.4:63024300-63024319 MS.gene004903:CDS 40.0%
ACAAAGGTCTCGCAATTGTT+CGG + chr1.4:63025720-63025739 MS.gene004903:CDS 40.0%
ACAATCCAAGAAAGTGGTCT+TGG - chr1.4:63021321-63021340 None:intergenic 40.0%
ACTCAAAAGACCAGTCCATT+AGG + chr1.4:63022815-63022834 MS.gene004903:intron 40.0%
AGAATATGGGAATGGAAAGG+AGG - chr1.4:63022339-63022358 None:intergenic 40.0%
AGGACAACCACGTCAAAATT+TGG - chr1.4:63025530-63025549 None:intergenic 40.0%
AGTGAAACTGACGTAGAAGT+CGG - chr1.4:63022929-63022948 None:intergenic 40.0%
AGTGTGAGTATGTATGTGTG+CGG - chr1.4:63023841-63023860 None:intergenic 40.0%
ATCCTTCAAATGCATGAAGC+AGG - chr1.4:63022570-63022589 None:intergenic 40.0%
ATGATGCTGTCATTGAGAGT+TGG - chr1.4:63023051-63023070 None:intergenic 40.0%
ATTGCGAGACCTTTGTAAGT+TGG - chr1.4:63025716-63025735 None:intergenic 40.0%
ATTGCTATCACTAGTACCAG+TGG - chr1.4:63021529-63021548 None:intergenic 40.0%
CAGAAAAAACCCACTTGAGT+TGG + chr1.4:63023508-63023527 MS.gene004903:intron 40.0%
CTACGTCAGTTTCACTCTAT+CGG + chr1.4:63022933-63022952 MS.gene004903:intron 40.0%
CTGTAATGATAGTCCGGATA+TGG + chr1.4:63025399-63025418 MS.gene004903:CDS 40.0%
CTTGGTGAACTGGTAGAAAA+CGG + chr1.4:63025821-63025840 MS.gene004903:CDS 40.0%
GAAACAACTTCTGCAACATG+TGG + chr1.4:63024781-63024800 MS.gene004903:intron 40.0%
GAATATACTTTGGCTGGGAA+AGG - chr1.4:63025060-63025079 None:intergenic 40.0%
GAATTGGGTACATGATCCAT+TGG + chr1.4:63024066-63024085 MS.gene004903:CDS 40.0%
GCTACACATCCAACTTACAA+AGG + chr1.4:63025704-63025723 MS.gene004903:CDS 40.0%
GGAAATCTCATTAAAGCCCT+CGG - chr1.4:63022666-63022685 None:intergenic 40.0%
GGACAACCACGTCAAAATTT+GGG - chr1.4:63025529-63025548 None:intergenic 40.0%
GTGCTTAGCAACAAGAAACA+AGG - chr1.4:63023372-63023391 None:intergenic 40.0%
TACATGAAAAGTCTGAGGGA+GGG + chr1.4:63022511-63022530 MS.gene004903:intron 40.0%
TACCTGGAATGAACTTGTCT+TGG + chr1.4:63026078-63026097 MS.gene004903:CDS 40.0%
TCTAATACCACCCGTCAAAT+TGG - chr1.4:63021790-63021809 None:intergenic 40.0%
TGAATCTCCAATGAAAGCCA+AGG - chr1.4:63024257-63024276 None:intergenic 40.0%
TGAATTAACTGAACCGGCAT+TGG - chr1.4:63021949-63021968 None:intergenic 40.0%
TGATCTGTACCATGGGAATT+GGG + chr1.4:63024051-63024070 MS.gene004903:CDS 40.0%
TGATGCTGTCATTGAGAGTT+GGG - chr1.4:63023050-63023069 None:intergenic 40.0%
TGATTCGATTATGCGTGTCT+CGG - chr1.4:63024528-63024547 None:intergenic 40.0%
TGGTGTGATTATAGCACCAA+AGG + chr1.4:63021851-63021870 MS.gene004903:CDS 40.0%
TGTGAGTGCATGTATATGTG+AGG - chr1.4:63023813-63023832 None:intergenic 40.0%
TGTGGAATTATCAGAAGTCG+TGG - chr1.4:63021883-63021902 None:intergenic 40.0%
TTACATGAAAAGTCTGAGGG+AGG + chr1.4:63022510-63022529 MS.gene004903:intron 40.0%
TTACGATTTCCCCGATTCTT+TGG - chr1.4:63025350-63025369 None:intergenic 40.0%
TTCAGTAGCTCGAAACCAAA+TGG + chr1.4:63024273-63024292 MS.gene004903:CDS 40.0%
TTCCAAGACAAGTTCATTCC+AGG - chr1.4:63026083-63026102 None:intergenic 40.0%
TTCTGCATCTGTGTCAATAC+AGG - chr1.4:63024118-63024137 None:intergenic 40.0%
TTGAGCAGGCAAACTAGTAT+TGG - chr1.4:63021703-63021722 None:intergenic 40.0%
TTGGTGAACTGGTAGAAAAC+GGG + chr1.4:63025822-63025841 MS.gene004903:CDS 40.0%
TTGTTAGACTTAAGCCCATG+AGG + chr1.4:63022784-63022803 MS.gene004903:intron 40.0%
TTTGGCGTGTTTGTTTGGTA+GGG + chr1.4:63023179-63023198 MS.gene004903:intron 40.0%
TTTGTGTAAAGTGGTCCCAA+TGG - chr1.4:63024085-63024104 None:intergenic 40.0%
! ACTTGTGAATTTGCTTGAGC+AGG - chr1.4:63021717-63021736 None:intergenic 40.0%
! ATTTTTGATGCAGTGCCAAG+AGG - chr1.4:63025109-63025128 None:intergenic 40.0%
! CTCTGTGTGAGGCTTTTAAT+TGG + chr1.4:63024002-63024021 MS.gene004903:intron 40.0%
! GGTCATTTGAAACCGTAGAA+GGG - chr1.4:63021824-63021843 None:intergenic 40.0%
! GTCATTTGAAACCGTAGAAG+GGG - chr1.4:63021823-63021842 None:intergenic 40.0%
! TCACAGTAGTTTCAGGTGTA+TGG + chr1.4:63023729-63023748 MS.gene004903:intron 40.0%
! TCATTTGAAACCGTAGAAGG+GGG - chr1.4:63021822-63021841 None:intergenic 40.0%
! TGGTCATTTGAAACCGTAGA+AGG - chr1.4:63021825-63021844 None:intergenic 40.0%
! TTTTGGCGTGTTTGTTTGGT+AGG + chr1.4:63023178-63023197 MS.gene004903:intron 40.0%
!! AATGCCGGTTCAGTTAATTC+AGG + chr1.4:63021948-63021967 MS.gene004903:CDS 40.0%
!! AGGTAGAGGTACCAAAGAAT+CGG + chr1.4:63025336-63025355 MS.gene004903:intron 40.0%
!! CTAGATAAAAGTGCTCAGTG+TGG - chr1.4:63022864-63022883 None:intergenic 40.0%
!! GGAATTTTGGCGTGTTTGTT+TGG + chr1.4:63023174-63023193 MS.gene004903:intron 40.0%
!! TCAGGCTTCTTTACTGATTC+TGG - chr1.4:63021918-63021937 None:intergenic 40.0%
!! TTCTGGAACAGCTGTTAATG+TGG - chr1.4:63021901-63021920 None:intergenic 40.0%
!! TTGAATAACGAGATAGTGGG+AGG + chr1.4:63025590-63025609 MS.gene004903:CDS 40.0%
!!! AATGGACTGGTCTTTTGAGT+TGG - chr1.4:63022815-63022834 None:intergenic 40.0%
!!! ATGGACTGGTCTTTTGAGTT+GGG - chr1.4:63022814-63022833 None:intergenic 40.0%
AACTGAAGAACCCCCTTCTA+CGG + chr1.4:63021809-63021828 MS.gene004903:CDS 45.0%
AAGGTTAAGCCTGTTGCACT+TGG + chr1.4:63025803-63025822 MS.gene004903:CDS 45.0%
ACACAGATGCAGAATTGCCA+GGG + chr1.4:63024124-63024143 MS.gene004903:CDS 45.0%
ACCATCCAAGACCACTTTCT+TGG + chr1.4:63021313-63021332 MS.gene004903:CDS 45.0%
ACCCGTCAAATTGGAAGAAC+CGG - chr1.4:63021781-63021800 None:intergenic 45.0%
ACGGTTTCAAATGACCAGTC+CGG + chr1.4:63021828-63021847 MS.gene004903:CDS 45.0%
ACTATTGCCAAACGAAGTCG+TGG - chr1.4:63021670-63021689 None:intergenic 45.0%
AGACAAGTCCAAGCAGATGA+AGG + chr1.4:63025628-63025647 MS.gene004903:CDS 45.0%
ATCAAACCTGAGACCTTGAG+AGG - chr1.4:63023569-63023588 None:intergenic 45.0%
ATGCAGAATTGCCAGGGTAA+TGG + chr1.4:63024130-63024149 MS.gene004903:CDS 45.0%
ATGCATGAGCAACAGGTTAC+AGG + chr1.4:63025857-63025876 MS.gene004903:CDS 45.0%
CAAACCAATGACCGGAAGAA+AGG - chr1.4:63025550-63025569 None:intergenic 45.0%
CAACACAAGTGTGAGTGTGT+CGG - chr1.4:63023866-63023885 None:intergenic 45.0%
CCAGCTGGAGCATAATCAAA+TGG - chr1.4:63025455-63025474 None:intergenic 45.0%
CCAGGACAGAAGTAATGGTT+CGG - chr1.4:63023257-63023276 None:intergenic 45.0%
CCATTTGATTATGCTCCAGC+TGG + chr1.4:63025452-63025471 MS.gene004903:CDS 45.0%
CCGCATCTGTAATGATAGTC+CGG + chr1.4:63025393-63025412 MS.gene004903:CDS 45.0%
CCGGACTATCATTACAGATG+CGG - chr1.4:63025396-63025415 None:intergenic 45.0%
CTATTGCCAAACGAAGTCGT+GGG - chr1.4:63021669-63021688 None:intergenic 45.0%
CTGCTTAGCAAACCAATGAC+CGG - chr1.4:63025558-63025577 None:intergenic 45.0%
GAACTCTCTAACAATAGGGC+TGG + chr1.4:63024443-63024462 MS.gene004903:intron 45.0%
GACTCTCTAATCACCATGAC+AGG + chr1.4:63023308-63023327 MS.gene004903:intron 45.0%
GATCATGTACCCAATTCCCA+TGG - chr1.4:63024063-63024082 None:intergenic 45.0%
GGAATTATCAGAAGTCGTGG+AGG - chr1.4:63021880-63021899 None:intergenic 45.0%
GGATGGGGAGGTGATTTATT+AGG + chr1.4:63024833-63024852 MS.gene004903:intron 45.0%
GTCCTGCTTCATGCATTTGA+AGG + chr1.4:63022565-63022584 MS.gene004903:intron 45.0%
GTCTACTTCCGAGTTTGAAG+TGG - chr1.4:63021568-63021587 None:intergenic 45.0%
GTCTCAGGTTTGATTCTCTC+CGG + chr1.4:63023575-63023594 MS.gene004903:intron 45.0%
GTGATCTGTACCATGGGAAT+TGG + chr1.4:63024050-63024069 MS.gene004903:CDS 45.0%
GTGTGAGTATGTATGTGTGC+GGG - chr1.4:63023840-63023859 None:intergenic 45.0%
GTTCCATTAACTTCGGGTCA+GGG - chr1.4:63025502-63025521 None:intergenic 45.0%
GTTGTTGACCTTCATCTGCT+TGG - chr1.4:63025639-63025658 None:intergenic 45.0%
TAGGCTGTGATCTGTACCAT+GGG + chr1.4:63024044-63024063 MS.gene004903:intron 45.0%
TATCCATGCTTGTGTGTGCA+TGG + chr1.4:63025251-63025270 MS.gene004903:intron 45.0%
TCACAGCCTACACAACAGAA+TGG - chr1.4:63024034-63024053 None:intergenic 45.0%
TCACCAGATCATTATGAGGG+TGG + chr1.4:63025749-63025768 MS.gene004903:CDS 45.0%
TCTAATCACCATGACAGGAG+TGG + chr1.4:63023313-63023332 MS.gene004903:intron 45.0%
TGACAATACCACTCCTGTCA+TGG - chr1.4:63023324-63023343 None:intergenic 45.0%
TGAGAGTTGGGTCACAGAAA+GGG - chr1.4:63023038-63023057 None:intergenic 45.0%
TGCACACACAAGCATGGATA+TGG - chr1.4:63025251-63025270 None:intergenic 45.0%
TGCAGAATTGCCAGGGTAAT+GGG + chr1.4:63024131-63024150 MS.gene004903:CDS 45.0%
TGTTCCATTAACTTCGGGTC+AGG - chr1.4:63025503-63025522 None:intergenic 45.0%
TTAGGTAAAAGAGGATGGGG+AGG + chr1.4:63024821-63024840 MS.gene004903:intron 45.0%
TTATTGACATCCTCGCTCGT+TGG - chr1.4:63021618-63021637 None:intergenic 45.0%
TTCATCTGCTTGGACTTGTC+TGG - chr1.4:63025629-63025648 None:intergenic 45.0%
TTCCATTAACTTCGGGTCAG+GGG - chr1.4:63025501-63025520 None:intergenic 45.0%
TTGAGAGTTGGGTCACAGAA+AGG - chr1.4:63023039-63023058 None:intergenic 45.0%
TTGTCCTTTCTTCCGGTCAT+TGG + chr1.4:63025543-63025562 MS.gene004903:CDS 45.0%
! AACCGATGCCACTTCAAACT+CGG + chr1.4:63021557-63021576 MS.gene004903:CDS 45.0%
! ACAGAAAGGGCTACCGATTA+AGG - chr1.4:63023025-63023044 None:intergenic 45.0%
! ACGTAGAAGTCGGCTCTTAA+AGG - chr1.4:63022919-63022938 None:intergenic 45.0%
! ATTCTCTCCGGTGCCAATTT+CGG + chr1.4:63023587-63023606 MS.gene004903:intron 45.0%
! CATAGCTTAAGTACCGCACT+CGG + chr1.4:63023137-63023156 MS.gene004903:intron 45.0%
! CGTAGAAGTCGGCTCTTAAA+GGG - chr1.4:63022918-63022937 None:intergenic 45.0%
! GTAGAAGTCGGCTCTTAAAG+GGG - chr1.4:63022917-63022936 None:intergenic 45.0%
! GTTCTTGTTTCATCGCCGAT+TGG + chr1.4:63021387-63021406 MS.gene004903:CDS 45.0%
! TAGAAGTCGGCTCTTAAAGG+GGG - chr1.4:63022916-63022935 None:intergenic 45.0%
! TCCAAGAAAGTGGTCTTGGA+TGG - chr1.4:63021317-63021336 None:intergenic 45.0%
! TGCTTTTGTACTTCTGGGCA+AGG + chr1.4:63023436-63023455 MS.gene004903:intron 45.0%
! TTCCGAGTTTGAAGTGGCAT+CGG - chr1.4:63021562-63021581 None:intergenic 45.0%
! TTTTAACCGCGCCATGGAAA+AGG + chr1.4:63025880-63025899 MS.gene004903:CDS 45.0%
!! AAAACCCACTTGAGTTGGTC+TGG + chr1.4:63023513-63023532 MS.gene004903:intron 45.0%
!! AAGCTAAAGTGGTGGATGCA+AGG - chr1.4:63022687-63022706 None:intergenic 45.0%
!! AGATAGTGGGAGGACAGTTA+TGG + chr1.4:63025600-63025619 MS.gene004903:CDS 45.0%
!! AGTTCATTCCAGGTATCGAC+AGG - chr1.4:63026073-63026092 None:intergenic 45.0%
!! GGTAGAGGTACCAAAGAATC+GGG + chr1.4:63025337-63025356 MS.gene004903:intron 45.0%
!! GTAGAGGTACCAAAGAATCG+GGG + chr1.4:63025338-63025357 MS.gene004903:CDS 45.0%
!! TGCCGGTTCTTCCAATTTGA+CGG + chr1.4:63021776-63021795 MS.gene004903:CDS 45.0%
!! TGGTGCTATAATCACACCAC+CGG - chr1.4:63021850-63021869 None:intergenic 45.0%
!! TTGAGTTGGGCTATCCTCAT+GGG - chr1.4:63022801-63022820 None:intergenic 45.0%
!! TTTGAGTTGGGCTATCCTCA+TGG - chr1.4:63022802-63022821 None:intergenic 45.0%
!! GATTTATTATTATTATTATT+AGG + chr1.4:63024803-63024822 MS.gene004903:intron 5.0%
!!! TTTTTAAAAATTTGAATAAT+TGG - chr1.4:63023702-63023721 None:intergenic 5.0%
AAAGAGGAAAGGGCTACCGT+TGG - chr1.4:63022966-63022985 None:intergenic 50.0%
AACGGTAGCCCTTTCCTCTT+TGG + chr1.4:63022965-63022984 MS.gene004903:intron 50.0%
AAGAGGAAAGGGCTACCGTT+GGG - chr1.4:63022965-63022984 None:intergenic 50.0%
ACCACCAGACCAACTCAAGT+GGG - chr1.4:63023520-63023539 None:intergenic 50.0%
ACCAGTTCACCAAGTGCAAC+AGG - chr1.4:63025815-63025834 None:intergenic 50.0%
ATCACTAAACGTGGCCCAGA+TGG + chr1.4:63026004-63026023 MS.gene004903:CDS 50.0%
ATCATTATGAGGGTGGAGCC+TGG + chr1.4:63025756-63025775 MS.gene004903:CDS 50.0%
CAAGCCATGAGGACCATATC+CGG - chr1.4:63025415-63025434 None:intergenic 50.0%
CAGTGTGGTACTAAGCCATG+AGG - chr1.4:63022849-63022868 None:intergenic 50.0%
CATGAGGCTCTCCAACCTAA+TGG - chr1.4:63022833-63022852 None:intergenic 50.0%
CCAAAACCCACGACTTCGTT+TGG + chr1.4:63021660-63021679 MS.gene004903:CDS 50.0%
CCAAACTAGCCCACCGAAAT+TGG - chr1.4:63023603-63023622 None:intergenic 50.0%
CCATGAAACGTGGCACCAAT+CGG - chr1.4:63021405-63021424 None:intergenic 50.0%
CCGAACCATTACTTCTGTCC+TGG + chr1.4:63023254-63023273 MS.gene004903:intron 50.0%
CGAGTGCAAACTATCCCAGA+AGG - chr1.4:63023280-63023299 None:intergenic 50.0%
CGTGGGATGTCACACTGAAA+GGG - chr1.4:63024193-63024212 None:intergenic 50.0%
CTATAATCACACCACCGGAC+TGG - chr1.4:63021845-63021864 None:intergenic 50.0%
GAAGGCCAGGACAGAAGTAA+TGG - chr1.4:63023262-63023281 None:intergenic 50.0%
GAAGTCGTGGAGGTTTCCTT+TGG - chr1.4:63021870-63021889 None:intergenic 50.0%
GACACAGATGCAGAATTGCC+AGG + chr1.4:63024123-63024142 MS.gene004903:CDS 50.0%
GACGTGGTTGTCCTTTCTTC+CGG + chr1.4:63025536-63025555 MS.gene004903:CDS 50.0%
GCAACTGTTTCGGTTGAAGC+AGG + chr1.4:63021753-63021772 MS.gene004903:CDS 50.0%
GCGTTTCAATACCGACGTGA+TGG + chr1.4:63025944-63025963 MS.gene004903:CDS 50.0%
GCTCCACCCTCATAATGATC+TGG - chr1.4:63025755-63025774 None:intergenic 50.0%
GGTTCTTCCAATTTGACGGG+TGG + chr1.4:63021780-63021799 MS.gene004903:CDS 50.0%
GTAGATAAAAGGGCCGAGTG+CGG - chr1.4:63023153-63023172 None:intergenic 50.0%
GTAGGCTGTGATCTGTACCA+TGG + chr1.4:63024043-63024062 MS.gene004903:intron 50.0%
GTTTCAAATGACCAGTCCGG+TGG + chr1.4:63021831-63021850 MS.gene004903:CDS 50.0%
TAGTCCGGATATGGTCCTCA+TGG + chr1.4:63025408-63025427 MS.gene004903:CDS 50.0%
TAGTGGGAGGACAGTTATGG+TGG + chr1.4:63025603-63025622 MS.gene004903:CDS 50.0%
TCGTGGGATGTCACACTGAA+AGG - chr1.4:63024194-63024213 None:intergenic 50.0%
TGAAGCCGCCAAAGAGGAAA+GGG - chr1.4:63022976-63022995 None:intergenic 50.0%
TGATTATGCTCCAGCTGGTG+TGG + chr1.4:63025457-63025476 MS.gene004903:CDS 50.0%
TGCTGCATATGCACCATACC+CGG + chr1.4:63025147-63025166 MS.gene004903:intron 50.0%
! AAGGGGGTGATGGCAATGTT+AGG - chr1.4:63022900-63022919 None:intergenic 50.0%
! CACTCGGCCCTTTTATCTAC+TGG + chr1.4:63023153-63023172 MS.gene004903:intron 50.0%
! CCAAACGAAGTCGTGGGTTT+TGG - chr1.4:63021663-63021682 None:intergenic 50.0%
! CGTCACTTTGACAAGCCATG+AGG - chr1.4:63025426-63025445 None:intergenic 50.0%
! GCCGGTTCTTCCAATTTGAC+GGG + chr1.4:63021777-63021796 MS.gene004903:CDS 50.0%
! GGATAGTTTGCACTCGAGTC+TGG + chr1.4:63023284-63023303 MS.gene004903:intron 50.0%
! GGGAAGACCTTGGCTTTCAT+TGG + chr1.4:63024247-63024266 MS.gene004903:CDS 50.0%
! TACTTCTGTCCTGGCCTTCT+GGG + chr1.4:63023263-63023282 MS.gene004903:intron 50.0%
! TTACTTCTGTCCTGGCCTTC+TGG + chr1.4:63023262-63023281 MS.gene004903:intron 50.0%
! TTGTAGCCTTTTCCATGGCG+CGG - chr1.4:63025889-63025908 None:intergenic 50.0%
!! AACGAAGTCGTGGGTTTTGG+TGG - chr1.4:63021660-63021679 None:intergenic 50.0%
!! AGAATTGCCAGGGTAATGGG+AGG + chr1.4:63024134-63024153 MS.gene004903:CDS 50.0%
!! CATTAGGTTGGAGAGCCTCA+TGG + chr1.4:63022831-63022850 MS.gene004903:intron 50.0%
!! CCAATTTCGGTGGGCTAGTT+TGG + chr1.4:63023600-63023619 MS.gene004903:intron 50.0%
!! TACAGGTTTTAACCGCGCCA+TGG + chr1.4:63025874-63025893 MS.gene004903:CDS 50.0%
!! TTGAGTTGGTCTGGTGGTGT+TGG + chr1.4:63023522-63023541 MS.gene004903:intron 50.0%
!! TTTGGGTTGGACTCTCCTCA+TGG - chr1.4:63023090-63023109 None:intergenic 50.0%
ACCGACGTGATGGTCATCCT+GGG + chr1.4:63025954-63025973 MS.gene004903:CDS 55.0%
ATGGTCATCCTGGGCCTTAC+AGG + chr1.4:63025963-63025982 MS.gene004903:CDS 55.0%
CACCACCAGACCAACTCAAG+TGG - chr1.4:63023521-63023540 None:intergenic 55.0%
CACCAGTGCAAGCAATCCTG+TGG - chr1.4:63026040-63026059 None:intergenic 55.0%
CAGTGCAAGCAATCCTGTGG+CGG - chr1.4:63026037-63026056 None:intergenic 55.0%
CCTGACAACGCATCCAATGC+CGG + chr1.4:63021933-63021952 MS.gene004903:CDS 55.0%
CTAAACGTGGCCCAGATGGA+AGG + chr1.4:63026008-63026027 MS.gene004903:CDS 55.0%
GCAAACTATCCCAGAAGGCC+AGG - chr1.4:63023275-63023294 None:intergenic 55.0%
GCACCATGCACACACAAGCA+TGG - chr1.4:63025257-63025276 None:intergenic 55.0%
GCTGATGAGAGGGAAGACCT+TGG + chr1.4:63024237-63024256 MS.gene004903:CDS 55.0%
GGTAGCCCTTTCCTCTTTGG+CGG + chr1.4:63022968-63022987 MS.gene004903:intron 55.0%
GTGAAGCCGCCAAAGAGGAA+AGG - chr1.4:63022977-63022996 None:intergenic 55.0%
GTTTCGGTTGAAGCAGGTGC+CGG + chr1.4:63021759-63021778 MS.gene004903:CDS 55.0%
TACCGACGTGATGGTCATCC+TGG + chr1.4:63025953-63025972 MS.gene004903:CDS 55.0%
TAGCCCACCGAAATTGGCAC+CGG - chr1.4:63023597-63023616 None:intergenic 55.0%
TCGGCTCTTAAAGGGGGTGA+TGG - chr1.4:63022910-63022929 None:intergenic 55.0%
TGCCCCTGACCCGAAGTTAA+TGG + chr1.4:63025496-63025515 MS.gene004903:CDS 55.0%
TGGAGCTTATCCACACCAGC+TGG - chr1.4:63025470-63025489 None:intergenic 55.0%
TGGCGGCTTCACTCACCAAT+CGG + chr1.4:63022985-63023004 MS.gene004903:intron 55.0%
TGTGCTCCTCTCAAGGTCTC+AGG + chr1.4:63023560-63023579 MS.gene004903:intron 55.0%
TGTGGAACTTCCAACGAGCG+AGG + chr1.4:63021605-63021624 MS.gene004903:CDS 55.0%
TTTGGGTCAGGGCTCCTGTA+AGG - chr1.4:63025980-63025999 None:intergenic 55.0%
! GCCTGTTGCACTTGGTGAAC+TGG + chr1.4:63025811-63025830 MS.gene004903:CDS 55.0%
! GGCTCTCCAACCTAATGGAC+TGG - chr1.4:63022828-63022847 None:intergenic 55.0%
! TCTCCGGTGCCAATTTCGGT+GGG + chr1.4:63023591-63023610 MS.gene004903:intron 55.0%
!! ACCCACTTGAGTTGGTCTGG+TGG + chr1.4:63023516-63023535 MS.gene004903:intron 55.0%
!! CCGATTGGTGCCACGTTTCA+TGG + chr1.4:63021402-63021421 MS.gene004903:CDS 55.0%
!! CTCTATCGGCACTGACCCAA+CGG + chr1.4:63022947-63022966 MS.gene004903:intron 55.0%
!! TGGTCTGGTGGTGTTGGCTT+GGG + chr1.4:63023528-63023547 MS.gene004903:intron 55.0%
!! TTCCAGGTATCGACAGGACC+TGG - chr1.4:63026067-63026086 None:intergenic 55.0%
!! TTGGTCTGGTGGTGTTGGCT+TGG + chr1.4:63023527-63023546 MS.gene004903:intron 55.0%
AACACCGGTGGGTCATGCAC+TGG + chr1.4:63025779-63025798 MS.gene004903:CDS 60.0%
ACACCGGTGGGTCATGCACT+GGG + chr1.4:63025780-63025799 MS.gene004903:CDS 60.0%
CGCCACAGGATTGCTTGCAC+TGG + chr1.4:63026035-63026054 MS.gene004903:CDS 60.0%
CTCGGAGTGTGCTCCTCTCA+AGG + chr1.4:63023553-63023572 MS.gene004903:intron 60.0%
CTTCCCAGTGCATGACCCAC+CGG - chr1.4:63025786-63025805 None:intergenic 60.0%
GCCCAGGATGACCATCACGT+CGG - chr1.4:63025958-63025977 None:intergenic 60.0%
GGTGAGTGAAGCCGCCAAAG+AGG - chr1.4:63022982-63023001 None:intergenic 60.0%
TGCAAGCAATCCTGTGGCGG+TGG - chr1.4:63026034-63026053 None:intergenic 60.0%
TGCCAGGTCCTGTCGATACC+TGG + chr1.4:63026062-63026081 MS.gene004903:CDS 60.0%
TGTCAGGCCTCCCATTACCC+TGG - chr1.4:63024144-63024163 None:intergenic 60.0%
! CCGGCATTGGATGCGTTGTC+AGG - chr1.4:63021936-63021955 None:intergenic 60.0%
! CTCTCCGGTGCCAATTTCGG+TGG + chr1.4:63023590-63023609 MS.gene004903:intron 60.0%
! CTTGAGAGGAGCACACTCCG+AGG - chr1.4:63023555-63023574 None:intergenic 60.0%
! TGCTTGCACTGGTGCATGCC+AGG + chr1.4:63026046-63026065 MS.gene004903:CDS 60.0%
!! GTGGTGTTGGCTTGGGACCT+CGG + chr1.4:63023535-63023554 MS.gene004903:intron 60.0%
!! TCGGGTCAGGGGCATCAAGA+TGG - chr1.4:63025490-63025509 None:intergenic 60.0%
AGATGGAAGGCCACCGCCAC+AGG + chr1.4:63026021-63026040 MS.gene004903:CDS 65.0%
CGGTGGGTCATGCACTGGGA+AGG + chr1.4:63025784-63025803 MS.gene004903:CDS 65.0%
GAGGGTGGAGCCTGGAACAC+CGG + chr1.4:63025764-63025783 MS.gene004903:CDS 65.0%
GCATGACCCACCGGTGTTCC+AGG - chr1.4:63025777-63025796 None:intergenic 65.0%
GTGGAGCCTGGAACACCGGT+GGG + chr1.4:63025768-63025787 MS.gene004903:CDS 65.0%
GTGGCGGTGGCCTTCCATCT+GGG - chr1.4:63026021-63026040 None:intergenic 65.0%
TCAGGGCTCCTGTAAGGCCC+AGG - chr1.4:63025974-63025993 None:intergenic 65.0%
TGTGGCGGTGGCCTTCCATC+TGG - chr1.4:63026022-63026041 None:intergenic 65.0%
GGTGGAGCCTGGAACACCGG+TGG + chr1.4:63025767-63025786 MS.gene004903:CDS 70.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 63021306 63026141 63021306 ID=MS.gene004903
chr1.4 mRNA 63021306 63026141 63021306 ID=MS.gene004903.t1;Parent=MS.gene004903
chr1.4 exon 63021306 63021969 63021306 ID=MS.gene004903.t1.exon1;Parent=MS.gene004903.t1
chr1.4 CDS 63021306 63021969 63021306 ID=cds.MS.gene004903.t1;Parent=MS.gene004903.t1
chr1.4 exon 63024047 63024321 63024047 ID=MS.gene004903.t1.exon2;Parent=MS.gene004903.t1
chr1.4 CDS 63024047 63024321 63024047 ID=cds.MS.gene004903.t1;Parent=MS.gene004903.t1
chr1.4 exon 63025338 63026141 63025338 ID=MS.gene004903.t1.exon3;Parent=MS.gene004903.t1
chr1.4 CDS 63025338 63026141 63025338 ID=cds.MS.gene004903.t1;Parent=MS.gene004903.t1
Gene Sequence

>MS.gene004903

ATGTCTTACCATCCAAGACCACTTTCTTGGATTGTTGTTTTAGTAGGAGCACTTGCAATTTTCTTAATCTATGCTTCATTTGTTCTTGTTTCATCGCCGATTGGTGCCACGTTTCATGGATATTTTTACGGTATAGGTAGTTCTGAGAAGTTAGATGTATCTGGATCTCCTATAAATGTTGCTTCTATTGATAATAAACCGTCTTTAGATTCACAATCTTCCACTGGTACTAGTGATAGCAATATAGAAAAAACCGATGCCACTTCAAACTCGGAAGTAGACAATAGTAAGTCTAGTTCTGTGGAACTTCCAACGAGCGAGGATGTCAATAAAACTTCTGATGTGAAACTTCCACCAAAACCCACGACTTCGTTTGGCAATAGTGTAGATACGGCCAATACTAGTTTGCCTGCTCAAGCAAATTCACAAGTTGATTCAACTTCAAGTGCAACTGTTTCGGTTGAAGCAGGTGCCGGTTCTTCCAATTTGACGGGTGGTATTAGAACTGAAGAACCCCCTTCTACGGTTTCAAATGACCAGTCCGGTGGTGTGATTATAGCACCAAAGGAAACCTCCACGACTTCTGATAATTCCACATTAACAGCTGTTCCAGAATCAGTAAAGAAGCCTGACAACGCATCCAATGCCGGTTCAGTTAATTCAGGTTACTGTTGCAATCTTTCACCTACACTAGCTTGTTTTTTAAATGCTTCATGGTATAATATTTACCATTCTTGTTTTGTACTACTATAATATACAATAACATAAAATTGTCTGTTTTTCTTTACTTCACTCTCTTTTGGAAGCACATTGTGTTTAGTAAAATAGTCTCATTTTATTAATCTTAACTCACTACTTGTTATATCCTAGAGAAACTGAAATGAACAGAAGATAGAAAAAAATCAAGAGAATAGAAGTGTATTATTGCAAACTGAACTGGAATTGTAGAAATGTAATTCAACCCAAGAGTTTTCCCTTTGTAAAGGATATCTCTTTTCACTTTCCATGTACAACTATCAAATTGACATCTCCTCCTTTCCATTCCCATATTCTCTTTTTAATTTTTATAACTCATTCTAACTATTACTACTAAATTTACAATTTTATTCTACCCCAACATTACTATTTTATCTAACTTCAAACTGTGATTAGGATTTAACCACCTAACAAAAAAACACTCATAGCTATTTGTCTAGTTAATGTATTACATGAAAAGTCTGAGGGAGGGATATATTTCGTCTTTAAACATGCATACATATGTCCTGCTTCATGCATTTGAAGGATTCAGGTTGAGAGAGAGATTTTTCTTACAGTAGACACTAATATAGCAAAGAGATGATGTTGTCTATATTTTTCTCCGAGGGCTTTAATGAGATTTCCTTGCATCCACCACTTTAGCTTGTTTTTAGTACAATTGTCGAGTAACCTCTATTTTATTTTGGTCTTTGTTTCAGTTATCAATTGGGCTAATTAAGTGGTTGTTAGACTTAAGCCCATGAGGATAGCCCAACTCAAAAGACCAGTCCATTAGGTTGGAGAGCCTCATGGCTTAGTACCACACTGAGCACTTTTATCTAGTTTATGTGGGACTCCTAACATTGCCATCACCCCCTTTAAGAGCCGACTTCTACGTCAGTTTCACTCTATCGGCACTGACCCAACGGTAGCCCTTTCCTCTTTGGCGGCTTCACTCACCAATCGGTATTTAGTTGAGTACCTTAATCGGTAGCCCTTTCTGTGACCCAACTCTCAATGACAGCATCATTTATTAGGACTTATGTCCATGAGGAGAGTCCAACCCAAAAGACTAGTTTATTAAGTGGGAGAGCATCATAGCTTAAGTACCGCACTCGGCCCTTTTATCTACTGGAATTTTGGCGTGTTTGTTTGGTAGGGTATCTGTTTGTTAACTCTCTAAATCATCAGAATTTTTTTTTTCTTTTTTCTTCCGAACCATTACTTCTGTCCTGGCCTTCTGGGATAGTTTGCACTCGAGTCTGGTGACTCTCTAATCACCATGACAGGAGTGGTATTGTCATGATGATGTTTGGTTGTTCACTGTTCCTTGTTTCTTGTTGCTAAGCACATAATTGAGTTGTTAATTAGCAACTGAATCAACGGATTTAATTTTGCTTTTGTACTTCTGGGCAAGGATCTGAATTTCATTGTCAACAACACTAAATCGCTTATAAAGAATTGTAACAGAAAAAACCCACTTGAGTTGGTCTGGTGGTGTTGGCTTGGGACCTCGGAGTGTGCTCCTCTCAAGGTCTCAGGTTTGATTCTCTCCGGTGCCAATTTCGGTGGGCTAGTTTGGCTTATTCTAAAAAAAAAAATTGTAACAGAAATATTTCGTTGTAGTATATACAAAATGAATAAATTGAAACATGAAACCAATTATTCAAATTTTTAAAAAGTTGAATTCACAGTAGTTTCAGGTGTATGGATTACTGACTGCAAATATGATGTATAATTCAAAGTTTTGGTTAGCAGATATGACACAGCCTCACATATACATGCACTCACACGAGCCCGCACACATACATACTCACACTCACCGACACACTCACACTTGTGTTGCTATATATGTTTGGAAAATTCTCAAACATATGTAAATTATTAGTAGCTGTATCTTGTTACTAAAAATTTCTTATTGTAAACAGGTGACGGTTTTATAATAATATTGTTTGAAATTACTCTGTGTGAGGCTTTTAATTGGTATTGTCCATTCTGTTGTGTAGGCTGTGATCTGTACCATGGGAATTGGGTACATGATCCATTGGGACCACTTTACACAAACAATACATGTCCTGTATTGACACAGATGCAGAATTGCCAGGGTAATGGGAGGCCTGACAAAGATTATGAGAATTGGCGATGGAAGCCCTTTCAGTGTGACATCCCACGATTTGATCCTAGAAAATTTTTGGAGCTGATGAGAGGGAAGACCTTGGCTTTCATTGGAGATTCAGTAGCTCGAAACCAAATGGAATCAATGTTGTGTATTCTGTGGCAGGTTATTTCTTTATTTTATTCCTTATTGATCTGTTTTGCATGGAAAATAAAATGATTTAGAGATTATGGAAATATTATCAGTTTTACTGTCGTCATTGTTGCTGCATATTGTTTGTGATTATGAACTCTCTAACAATAGGGCTGGAAATATTTGAACTTTGAATTTGACTAGTTAAGATGTACGAGATTGTTTGTAAGTTTTATCCGAGACACGCATAATCGAATCATTTACAGTTTGCTTTGTTTGGTAGTAAATTAGTCCAATAAAGTAAATTCACATCTCAACAGAAAGACTTCAACATGATAAAGCTTTCAACCTGTTTGTATTTTATATTTGTTTGGTTTGGCTTCATCTAAATAAATAGAGTAACTCTTATTATTATTGTATTATGGATGCTTAATTTATTGACATTTATTTGAGAACCATAAATGTTAATAAAAAGAAAAATTGTTTTGCTTTGAAACAACTTCTGCAACATGTGGATTTATTATTATTATTATTAGGTAAAAGAGGATGGGGAGGTGATTTATTAGGTAAACCAGGAAGTAAATGAGAATGAAATCAGGAAACAAATTGATATGCATCCAGTACAACAATTTCTGCATTTATAATCTAGTTTCTCATATAAACATTTCTTTATTAGGTAAAAGAGGAACGTAATCAAATTGATTTGGCGAGAAACTAAGTATATTTTTCTCAACATTTCTTTTCTTAGTTTGGCTTTGAAATTTTATGCCTTTCCCAGCCAAAGTATATTCCAATAAAAAGAAAAATGCATGTTTTGCCTCTTGGCACTGCATCAAAAATTGTTTTATGTGGCTTTAATGCTGCATATGCACCATACCCGGTTCATAATGAAATGGTTTTTAGCCGTTCAACAGCATGCATTTGATTGCAAGTATTCATTTACACATACATAGGGTTTTCCATATCCATGCTTGTGTGTGCATGGTGCATGTGATTAAGCATCCATTTTATCATAGCTAGAAGCTTAACTGAAAATATGGTATTTTCAGGTAGAGGTACCAAAGAATCGGGGAAATCGTAATATGCAAAGATATTATTTTAGGTCCGCATCTGTAATGATAGTCCGGATATGGTCCTCATGGCTTGTCAAAGTGACGTCTGAACCATTTGATTATGCTCCAGCTGGTGTGGATAAGCTCCATCTTGATGCCCCTGACCCGAAGTTAATGGAACATATCCCAAATTTTGACGTGGTTGTCCTTTCTTCCGGTCATTGGTTTGCTAAGCAGTCTGTGTATATCTTGAATAACGAGATAGTGGGAGGACAGTTATGGTGGCCAGACAAGTCCAAGCAGATGAAGGTCAACAACATTCAAGCATATGCTATATCTGTAGAAACAATTCTTACTGCTCTTGCTACACATCCAACTTACAAAGGTCTCGCAATTGTTCGGTCCTATTCACCAGATCATTATGAGGGTGGAGCCTGGAACACCGGTGGGTCATGCACTGGGAAGGTTAAGCCTGTTGCACTTGGTGAACTGGTAGAAAACGGGCACACAAATACGATGCATGAGCAACAGGTTACAGGTTTTAACCGCGCCATGGAAAAGGCTACAAATAAATCGAAGTTGACGTTAATGGACATTACTCAAGCGTTTCAATACCGACGTGATGGTCATCCTGGGCCTTACAGGAGCCCTGACCCAAATAAGATCACTAAACGTGGCCCAGATGGAAGGCCACCGCCACAGGATTGCTTGCACTGGTGCATGCCAGGTCCTGTCGATACCTGGAATGAACTTGTCTTGGAAATCATCAAGAGAGAATATGAAGGTGGAAGTGCATCATGA
Protein sequence

>MS.gene004903.t1

MSYHPRPLSWIVVLVGALAIFLIYASFVLVSSPIGATFHGYFYGIGSSEKLDVSGSPINVASIDNKPSLDSQSSTGTSDSNIEKTDATSNSEVDNSKSSSVELPTSEDVNKTSDVKLPPKPTTSFGNSVDTANTSLPAQANSQVDSTSSATVSVEAGAGSSNLTGGIRTEEPPSTVSNDQSGGVIIAPKETSTTSDNSTLTAVPESVKKPDNASNAGSVNSGCDLYHGNWVHDPLGPLYTNNTCPVLTQMQNCQGNGRPDKDYENWRWKPFQCDIPRFDPRKFLELMRGKTLAFIGDSVARNQMESMLCILWQVEVPKNRGNRNMQRYYFRSASVMIVRIWSSWLVKVTSEPFDYAPAGVDKLHLDAPDPKLMEHIPNFDVVVLSSGHWFAKQSVYILNNEIVGGQLWWPDKSKQMKVNNIQAYAISVETILTALATHPTYKGLAIVRSYSPDHYEGGAWNTGGSCTGKVKPVALGELVENGHTNTMHEQQVTGFNRAMEKATNKSKLTLMDITQAFQYRRDGHPGPYRSPDPNKITKRGPDGRPPPQDCLHWCMPGPVDTWNELVLEIIKREYEGGSAS