AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene07424

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07424.t1 MTR_1g076690 97.931 580 12 0 1 580 1 580 0.0 1179
MS.gene07424.t1 MTR_6g061710 58.854 576 167 7 6 580 18 524 0.0 685
MS.gene07424.t1 MTR_6g016880 34.949 392 225 10 198 573 45 422 2.50e-78 254
MS.gene07424.t1 MTR_8g099300 36.158 354 212 8 223 570 74 419 6.64e-77 250
MS.gene07424.t1 MTR_7g019120 34.783 368 224 6 211 573 67 423 7.45e-77 250
MS.gene07424.t1 MTR_7g033230 35.240 437 250 13 145 572 199 611 7.31e-73 244
MS.gene07424.t1 MTR_7g033230 35.240 437 250 13 145 572 269 681 2.92e-72 245
MS.gene07424.t1 MTR_6g016875 34.239 368 217 7 215 571 56 409 1.25e-70 233
MS.gene07424.t1 MTR_6g007777 35.196 358 212 9 223 573 116 460 1.61e-70 234
MS.gene07424.t1 MTR_8g027900 36.188 362 216 9 215 570 203 555 1.80e-70 237
MS.gene07424.t1 MTR_5g035090 36.538 364 200 10 223 572 83 429 6.18e-70 232
MS.gene07424.t1 MTR_3g109840 34.351 393 233 10 186 572 44 417 1.54e-67 225
MS.gene07424.t1 MTR_2g016060 35.135 370 207 10 219 572 50 402 3.76e-67 224
MS.gene07424.t1 MTR_5g035080 34.167 360 215 10 223 572 75 422 6.06e-65 219
MS.gene07424.t1 MTR_5g035150 34.160 363 212 11 223 572 85 433 8.81e-65 218
MS.gene07424.t1 MTR_8g104970 36.338 355 212 10 223 571 120 466 1.42e-64 219
MS.gene07424.t1 MTR_5g035070 35.734 361 209 10 223 572 87 435 2.90e-60 207
MS.gene07424.t1 MTR_7g094750 33.607 366 207 10 223 573 91 435 5.99e-53 187
MS.gene07424.t1 MTR_7g093450 31.283 374 208 13 223 575 248 593 7.67e-53 190
MS.gene07424.t1 MTR_0136s0010 31.025 361 207 12 223 566 170 505 1.80e-52 187
MS.gene07424.t1 MTR_5g033800 31.300 377 221 11 201 566 130 479 9.27e-51 182
MS.gene07424.t1 MTR_8g093870 31.122 392 212 14 204 570 114 472 1.23e-50 181
MS.gene07424.t1 MTR_4g126950 29.156 391 237 10 190 566 78 442 4.15e-50 179
MS.gene07424.t1 MTR_8g069790 30.175 401 232 13 184 566 142 512 2.37e-49 179
MS.gene07424.t1 MTR_7g109550 32.432 370 183 15 223 567 137 464 2.51e-49 178
MS.gene07424.t1 MTR_4g125060 29.167 528 278 20 96 570 26 510 2.83e-49 179
MS.gene07424.t1 MTR_4g125060 28.824 510 268 19 114 570 72 539 1.81e-48 177
MS.gene07424.t1 MTR_4g125060 31.316 380 205 14 215 570 124 471 7.99e-48 174
MS.gene07424.t1 MTR_2g022560 32.514 366 206 9 222 570 96 437 1.59e-47 172
MS.gene07424.t1 MTR_5g071350 31.034 377 224 11 205 566 40 395 1.77e-47 171
MS.gene07424.t1 MTR_5g059400 28.738 428 247 13 174 572 123 521 1.98e-47 174
MS.gene07424.t1 MTR_1g116130 28.738 428 247 13 174 572 123 521 1.98e-47 174
MS.gene07424.t1 MTR_8g463790 28.989 376 226 13 219 578 67 417 4.06e-46 168
MS.gene07424.t1 MTR_4g121560 28.462 390 244 10 195 570 85 453 3.59e-45 166
MS.gene07424.t1 MTR_1g112210 30.791 354 188 14 223 566 59 365 5.78e-41 152
MS.gene07424.t1 MTR_3g049330 29.670 364 210 12 212 566 20 346 7.10e-41 152
MS.gene07424.t1 MTR_1g058380 29.952 414 215 15 204 580 29 404 1.28e-40 152
MS.gene07424.t1 MTR_1g112210 30.447 358 197 14 223 566 59 378 1.32e-40 152
MS.gene07424.t1 MTR_5g083260 28.571 399 250 16 184 567 43 421 5.24e-40 151
MS.gene07424.t1 MTR_1g050448 30.366 382 224 13 196 570 29 375 9.06e-40 149
MS.gene07424.t1 MTR_3g071650 28.061 392 256 13 186 567 52 427 1.46e-39 150
MS.gene07424.t1 MTR_3g070900 30.278 360 215 13 223 566 106 445 1.53e-38 147
MS.gene07424.t1 MTR_4g014430 27.778 378 226 15 212 570 97 446 3.75e-38 146
MS.gene07424.t1 MTR_4g014440 28.184 369 225 12 221 570 60 407 4.67e-38 145
MS.gene07424.t1 MTR_7g070060 28.232 379 244 13 205 570 46 409 1.70e-37 144
MS.gene07424.t1 MTR_3g021060 29.891 368 188 13 223 570 46 363 3.75e-37 142
MS.gene07424.t1 MTR_2g073510 29.600 375 205 17 212 570 22 353 4.10e-37 141
MS.gene07424.t1 MTR_3g090120 29.032 372 213 14 222 576 128 465 4.37e-37 144
MS.gene07424.t1 MTR_1g111010 31.564 358 187 15 223 570 32 341 6.65e-37 140
MS.gene07424.t1 MTR_3g464570 28.056 360 213 11 223 566 43 372 6.76e-37 141
MS.gene07424.t1 MTR_8g093530 26.525 377 232 11 211 575 78 421 1.30e-36 142
MS.gene07424.t1 MTR_3g035830 28.415 366 188 13 223 566 31 344 4.73e-36 138
MS.gene07424.t1 MTR_2g091175 30.199 351 200 13 223 566 50 362 2.39e-35 137
MS.gene07424.t1 MTR_2g015720 30.471 361 194 16 219 566 38 354 2.99e-35 136
MS.gene07424.t1 MTR_5g034810 27.083 384 236 12 190 566 2 348 3.78e-35 136
MS.gene07424.t1 MTR_4g079700 29.577 355 197 14 223 566 47 359 1.03e-34 135
MS.gene07424.t1 MTR_3g021090 28.689 366 187 13 223 566 31 344 1.43e-34 135
MS.gene07424.t1 MTR_7g019140 50.476 105 52 0 211 315 67 171 4.23e-34 127
MS.gene07424.t1 MTR_5g082880 27.869 366 219 13 223 566 165 507 1.41e-33 134
MS.gene07424.t1 MTR_4g016940 26.923 364 228 14 223 570 86 427 1.48e-33 133
MS.gene07424.t1 MTR_4g088030 28.371 356 207 12 220 566 30 346 2.26e-33 130
MS.gene07424.t1 MTR_7g068920 25.895 363 233 13 223 570 80 421 4.05e-33 131
MS.gene07424.t1 MTR_7g094750 34.146 246 142 7 223 456 91 328 5.14e-32 126
MS.gene07424.t1 MTR_4g092830 27.198 364 230 12 223 570 48 392 1.32e-31 127
MS.gene07424.t1 MTR_5g035120 51.685 89 43 0 223 311 75 163 3.94e-31 119
MS.gene07424.t1 MTR_2g073500 29.086 361 201 14 218 566 24 341 5.59e-31 124
MS.gene07424.t1 MTR_4g087730 28.571 350 208 13 223 566 45 358 9.95e-30 120
MS.gene07424.t1 MTR_5g033800 34.826 201 115 5 201 393 130 322 1.63e-29 120
MS.gene07424.t1 MTR_6g016240 24.934 377 235 12 215 568 63 414 1.11e-28 119
MS.gene07424.t1 MTR_5g035140 31.660 259 150 12 327 573 25 268 4.06e-28 114
MS.gene07424.t1 MTR_7g070060 44.444 108 59 1 205 311 46 153 1.43e-25 107
MS.gene07424.t1 MTR_3g464570 25.424 295 174 11 287 565 3 267 3.17e-16 79.7
MS.gene07424.t1 MTR_7g070060 24.351 308 206 12 275 570 15 307 4.43e-15 76.6
MS.gene07424.t1 MTR_0929s0010 46.667 60 32 0 211 270 67 126 9.75e-14 68.6
MS.gene07424.t1 MTR_7g019130 30.189 106 72 1 356 461 21 124 1.56e-13 68.6
MS.gene07424.t1 MTR_5g069320 24.579 297 147 11 278 563 156 386 2.80e-13 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07424.t1 AT4G25360 55.172 580 189 8 5 578 18 532 0.0 637
MS.gene07424.t1 AT4G25360 55.172 580 189 8 5 578 18 532 0.0 637
MS.gene07424.t1 AT5G51640 73.995 373 94 2 211 580 126 498 0.0 617
MS.gene07424.t1 AT5G15900 38.107 391 218 11 197 577 40 416 7.90e-82 263
MS.gene07424.t1 AT5G15900 38.107 391 218 11 197 577 59 435 1.08e-81 263
MS.gene07424.t1 AT1G01430 37.726 387 223 11 196 570 67 447 2.39e-81 263
MS.gene07424.t1 AT5G15890 37.640 356 196 8 223 571 187 523 4.61e-78 256
MS.gene07424.t1 AT4G11090 38.071 394 226 12 186 570 41 425 8.94e-78 253
MS.gene07424.t1 AT4G23790 37.360 356 208 8 223 570 79 427 1.12e-76 249
MS.gene07424.t1 AT1G70230 38.462 364 181 11 223 572 79 413 1.95e-75 246
MS.gene07424.t1 AT4G01080 38.315 368 209 9 214 575 81 436 1.75e-74 244
MS.gene07424.t1 AT3G02440 31.068 412 264 8 168 571 70 469 2.46e-73 242
MS.gene07424.t1 AT3G02440 31.068 412 264 8 168 571 78 477 2.81e-73 242
MS.gene07424.t1 AT3G28150 32.410 361 223 8 219 572 66 412 1.39e-65 220
MS.gene07424.t1 AT5G49340 31.169 385 214 9 204 566 82 437 5.94e-52 185
MS.gene07424.t1 AT5G20590 32.964 361 201 11 222 566 140 475 8.00e-52 185
MS.gene07424.t1 AT1G60790 30.083 482 277 16 110 566 82 528 1.00e-51 186
MS.gene07424.t1 AT5G06700 29.834 362 210 10 223 566 255 590 3.85e-49 180
MS.gene07424.t1 AT3G06080 30.481 374 213 10 221 573 101 448 5.77e-48 174
MS.gene07424.t1 AT1G73140 30.831 373 227 11 213 574 57 409 1.92e-47 171
MS.gene07424.t1 AT5G19160 30.667 375 225 11 221 579 97 452 4.73e-47 171
MS.gene07424.t1 AT5G20680 29.657 408 224 13 189 570 87 457 7.40e-47 171
MS.gene07424.t1 AT3G12060 30.055 366 228 9 223 577 196 544 1.70e-46 172
MS.gene07424.t1 AT3G62390 29.805 359 208 9 223 566 138 467 1.90e-46 170
MS.gene07424.t1 AT5G20680 26.538 520 319 14 78 570 50 533 2.17e-46 171
MS.gene07424.t1 AT5G20680 26.538 520 319 14 78 570 68 551 2.57e-46 171
MS.gene07424.t1 AT5G20680 26.538 520 319 14 78 570 68 551 2.57e-46 171
MS.gene07424.t1 AT5G20680 26.538 520 319 14 78 570 68 551 2.57e-46 171
MS.gene07424.t1 AT5G20680 26.538 520 319 14 78 570 68 551 2.57e-46 171
MS.gene07424.t1 AT5G64020 30.709 381 202 16 223 570 57 408 3.04e-46 168
MS.gene07424.t1 AT5G06230 29.333 375 221 12 212 566 10 360 1.26e-42 157
MS.gene07424.t1 AT5G06230 29.333 375 221 12 212 566 51 401 3.82e-42 157
MS.gene07424.t1 AT2G40160 28.431 408 245 15 189 573 44 427 1.23e-41 156
MS.gene07424.t1 AT2G40160 28.501 407 244 15 189 572 44 426 3.07e-41 154
MS.gene07424.t1 AT2G30010 30.628 382 215 13 207 566 39 392 3.38e-41 154
MS.gene07424.t1 AT2G30010 30.628 382 215 13 207 566 82 435 4.81e-41 154
MS.gene07424.t1 AT3G14850 29.888 358 198 13 222 566 33 350 1.29e-40 151
MS.gene07424.t1 AT5G64470 28.184 369 215 14 223 570 55 394 7.70e-40 150
MS.gene07424.t1 AT3G11570 30.409 342 200 12 239 566 98 415 8.76e-40 150
MS.gene07424.t1 AT2G40320 28.871 381 232 16 204 567 61 419 1.04e-39 150
MS.gene07424.t1 AT2G30900 29.577 355 203 12 223 566 43 361 1.27e-39 149
MS.gene07424.t1 AT3G54260 30.556 360 202 12 223 570 51 374 7.14e-39 147
MS.gene07424.t1 AT3G11030 27.123 365 241 12 213 567 96 445 1.12e-38 148
MS.gene07424.t1 AT5G64470 28.108 370 220 14 223 570 55 400 1.13e-38 147
MS.gene07424.t1 AT2G31110 30.110 362 209 14 213 566 33 358 1.71e-37 142
MS.gene07424.t1 AT1G29050 28.283 396 237 12 185 570 20 378 4.15e-37 142
MS.gene07424.t1 AT1G48880 28.609 381 209 14 212 573 106 442 6.38e-37 143
MS.gene07424.t1 AT2G14530 27.461 386 227 15 209 570 50 406 1.31e-36 141
MS.gene07424.t1 AT5G01620 29.058 382 219 17 211 570 98 449 2.31e-36 141
MS.gene07424.t1 AT5G01620 29.058 382 219 17 211 570 98 449 2.31e-36 141
MS.gene07424.t1 AT5G01620 29.730 370 208 17 223 570 118 457 3.00e-36 141
MS.gene07424.t1 AT2G37720 27.224 371 210 13 223 567 143 479 6.64e-36 140
MS.gene07424.t1 AT2G34070 28.099 363 206 14 221 570 63 383 2.14e-35 137
MS.gene07424.t1 AT2G38320 27.816 435 250 20 163 570 7 404 1.61e-34 135
MS.gene07424.t1 AT2G40150 27.957 372 229 12 223 573 71 424 2.67e-34 135
MS.gene07424.t1 AT5G01360 26.776 366 221 12 223 567 36 375 8.75e-34 132
MS.gene07424.t1 AT5G01360 26.776 366 221 12 223 567 92 431 1.67e-33 133
MS.gene07424.t1 AT2G42570 26.913 379 235 11 198 570 22 364 2.62e-33 131
MS.gene07424.t1 AT5G58600 28.108 370 215 12 220 570 63 400 2.88e-33 132
MS.gene07424.t1 AT1G78710 28.184 369 209 16 212 566 26 352 1.10e-31 126
MS.gene07424.t1 AT3G55990 27.586 377 216 15 223 572 140 486 2.92e-30 124
MS.gene07424.t1 AT3G62390 54.639 97 43 1 223 318 138 234 1.22e-29 121
MS.gene07424.t1 AT5G20590 33.065 248 144 7 222 456 140 378 2.84e-29 120
MS.gene07424.t1 AT5G19160 29.675 246 155 6 221 455 97 335 2.17e-28 117
MS.gene07424.t1 AT2G38320 27.907 344 193 16 253 570 7 321 5.44e-27 112
MS.gene07424.t1 AT3G06080 29.644 253 148 7 221 456 101 340 5.68e-27 112
MS.gene07424.t1 AT2G40160 29.680 219 146 5 189 401 44 260 1.06e-26 111
MS.gene07424.t1 AT5G64470 29.057 265 152 10 223 466 55 304 1.28e-25 108
MS.gene07424.t1 AT5G64470 29.057 265 152 10 223 466 55 304 1.58e-25 107
MS.gene07424.t1 AT2G31110 35.484 186 105 6 215 394 35 211 3.94e-25 105
MS.gene07424.t1 AT2G30900 34.286 175 98 7 223 390 43 207 4.09e-25 105
MS.gene07424.t1 AT5G06230 28.464 267 161 9 212 458 51 307 2.89e-22 98.2
MS.gene07424.t1 AT1G78710 41.441 111 56 3 208 311 10 118 2.20e-21 95.5
MS.gene07424.t1 AT5G58600 44.086 93 51 1 220 311 63 155 5.58e-21 94.0
MS.gene07424.t1 AT3G14850 26.224 286 158 13 294 566 2 247 9.50e-15 74.7
MS.gene07424.t1 AT2G34070 24.825 286 160 14 294 566 2 245 3.60e-12 67.4

Find 171 sgRNAs with CRISPR-Local

Find 391 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACGTTTAGTGATCTTATT+TGG 0.114557 1.2:+63789926 None:intergenic
TCAGGCTTCTTTACTGATTC+TGG 0.163701 1.2:+63794008 None:intergenic
CCAATAGAAGCAACATTTAT+AGG 0.187342 1.2:+63794449 None:intergenic
AGGACAACCACGTCAAAATT+TGG 0.190228 1.2:+63790394 None:intergenic
TAAATCGAAGTTGACGTTAA+TGG 0.229432 1.2:-63790011 MS.gene07424:CDS
ATGGTCATCCTGGGCCTTAC+AGG 0.251182 1.2:-63789958 MS.gene07424:CDS
ACCATCCAAGACCACTTTCT+TGG 0.251239 1.2:-63794610 MS.gene07424:CDS
CCGATTGGTGCCACGTTTCA+TGG 0.257508 1.2:-63794521 MS.gene07424:CDS
CCTATAAATGTTGCTTCTAT+TGG 0.270327 1.2:-63794449 MS.gene07424:CDS
CCAAACGAAGTCGTGGGTTT+TGG 0.277729 1.2:+63794263 None:intergenic
TGTGGCGGTGGCCTTCCATC+TGG 0.278954 1.2:+63789902 None:intergenic
TGCCCCTGACCCGAAGTTAA+TGG 0.289127 1.2:-63790425 MS.gene07424:CDS
TTACGATTTCCCCGATTCTT+TGG 0.311708 1.2:+63790574 None:intergenic
GCATGACCCACCGGTGTTCC+AGG 0.323014 1.2:+63790147 None:intergenic
GACGTGGTTGTCCTTTCTTC+CGG 0.330743 1.2:-63790385 MS.gene07424:CDS
TCTAATACCACCCGTCAAAT+TGG 0.331043 1.2:+63794136 None:intergenic
ATGCATGAGCAACAGGTTAC+AGG 0.340638 1.2:-63790064 MS.gene07424:CDS
GGGAAGACCTTGGCTTTCAT+TGG 0.343839 1.2:-63791674 MS.gene07424:CDS
AACTTCAAGTGCAACTGTTT+CGG 0.351632 1.2:-63794180 MS.gene07424:CDS
TTAGTGATCTTATTTGGGTC+AGG 0.357250 1.2:+63789932 None:intergenic
CACGTTTAGTGATCTTATTT+GGG 0.366019 1.2:+63789927 None:intergenic
TACACAACATTGATTCCATT+TGG 0.372534 1.2:+63791633 None:intergenic
GCCTGTTGCACTTGGTGAAC+TGG 0.373204 1.2:-63790110 MS.gene07424:CDS
TTGTCCTTTCTTCCGGTCAT+TGG 0.374487 1.2:-63790378 MS.gene07424:CDS
TCTGAGAAGTTAGATGTATC+TGG 0.378480 1.2:-63794476 MS.gene07424:CDS
GTGATCTGTACCATGGGAAT+TGG 0.379220 1.2:-63791871 MS.gene07424:CDS
TGCAGAATTGCCAGGGTAAT+GGG 0.379873 1.2:-63791790 MS.gene07424:CDS
CCAAAACCCACGACTTCGTT+TGG 0.382102 1.2:-63794263 MS.gene07424:CDS
TGCTTGCACTGGTGCATGCC+AGG 0.387421 1.2:-63789875 MS.gene07424:CDS
TTCATCTGCTTGGACTTGTC+TGG 0.388587 1.2:+63790295 None:intergenic
GGACAACCACGTCAAAATTT+GGG 0.391976 1.2:+63790395 None:intergenic
TTCCAAGACAAGTTCATTCC+AGG 0.392884 1.2:+63789841 None:intergenic
ACCAGTTCACCAAGTGCAAC+AGG 0.396065 1.2:+63790109 None:intergenic
GGATATGTTCCATTAACTTC+GGG 0.398865 1.2:+63790416 None:intergenic
TGTTCCATTAACTTCGGGTC+AGG 0.405587 1.2:+63790421 None:intergenic
TGCCGGTTCTTCCAATTTGA+CGG 0.407032 1.2:-63794147 MS.gene07424:CDS
CTGTAATGATAGTCCGGATA+TGG 0.407364 1.2:-63790522 MS.gene07424:CDS
TACCGACATGATGGTCATCC+TGG 0.409265 1.2:-63789968 MS.gene07424:CDS
GTTGTTGACCTTCATCTGCT+TGG 0.410264 1.2:+63790285 None:intergenic
AGATGGAAGGCCACCGCCAC+AGG 0.412614 1.2:-63789900 MS.gene07424:CDS
TTTGGGTCAGGGCTCCTGTA+AGG 0.416109 1.2:+63789944 None:intergenic
CCGGCATTGGATGCGTTGTC+AGG 0.417008 1.2:+63793990 None:intergenic
CTGACAAAGATTATGAGAAT+TGG 0.417959 1.2:-63791763 MS.gene07424:CDS
ACCCGTCAAATTGGAAGAAC+CGG 0.418466 1.2:+63794145 None:intergenic
ATGCAGAATTGCCAGGGTAA+TGG 0.425214 1.2:-63791791 MS.gene07424:CDS
CTCATAATGATCTGGTGAAT+AGG 0.425680 1.2:+63790177 None:intergenic
AATGCCGGTTCAGTTAATTC+AGG 0.433625 1.2:-63793975 MS.gene07424:intron
AAATACGATGCATGAGCAAC+AGG 0.433872 1.2:-63790071 MS.gene07424:CDS
GTGGCGGTGGCCTTCCATCT+GGG 0.434365 1.2:+63789903 None:intergenic
TATCTTGAATAACGAGATAG+TGG 0.435893 1.2:-63790335 MS.gene07424:CDS
GAAGTCGTGGAGGTTTCCTT+TGG 0.438635 1.2:+63794056 None:intergenic
AACACCGGTGGGTCATGCAC+TGG 0.441439 1.2:-63790142 MS.gene07424:CDS
ACTTGTGAATTTGCTTGAGC+AGG 0.443123 1.2:+63794209 None:intergenic
CAATTCTCATAATCTTTGTC+AGG 0.443282 1.2:+63791764 None:intergenic
TTCTGCATCTGTGTCAATAC+AGG 0.448339 1.2:+63791806 None:intergenic
TGAATTAACTGAACCGGCAT+TGG 0.450829 1.2:+63793977 None:intergenic
AGGTAGAGGTACCAAAGAAT+CGG 0.451259 1.2:-63790585 MS.gene07424:CDS
ATCATTATGAGGGTGGAGCC+TGG 0.451662 1.2:-63790165 MS.gene07424:CDS
GCCGGTTCTTCCAATTTGAC+GGG 0.453765 1.2:-63794146 MS.gene07424:CDS
ACAATCCAAGAAAGTGGTCT+TGG 0.457718 1.2:+63794605 None:intergenic
CTTGGTGAACTGGTAGAAAA+CGG 0.458499 1.2:-63790100 MS.gene07424:CDS
GGTAGAGGTACCAAAGAATC+GGG 0.459715 1.2:-63790584 MS.gene07424:CDS
TACCTGGAATGAACTTGTCT+TGG 0.460482 1.2:-63789843 MS.gene07424:CDS
ATTGCGAGACCTTTGTAAGT+TGG 0.460750 1.2:+63790208 None:intergenic
TTCAGTAGCTCGAAACCAAA+TGG 0.465522 1.2:-63791648 MS.gene07424:CDS
GGGATATGTTCCATTAACTT+CGG 0.466003 1.2:+63790415 None:intergenic
CCATGAAACGTGGCACCAAT+CGG 0.466696 1.2:+63794521 None:intergenic
TGCCAGGTCCTGTCGATACC+TGG 0.468729 1.2:-63789859 MS.gene07424:CDS
TCAGGGCTCCTGTAAGGCCC+AGG 0.476391 1.2:+63789950 None:intergenic
TGATCTGTACCATGGGAATT+GGG 0.480897 1.2:-63791870 MS.gene07424:CDS
GTAACCTGAATTAACTGAAC+CGG 0.483044 1.2:+63793971 None:intergenic
TTCCGAGTTTGAAGTGGTAT+CGG 0.483511 1.2:+63794364 None:intergenic
ACAAAGGTCTCGCAATTGTT+CGG 0.487631 1.2:-63790201 MS.gene07424:CDS
TTGAGCAGGCAAACTAGTAT+TGG 0.488542 1.2:+63794223 None:intergenic
GAGGGTGGAGCCTGGAACAC+CGG 0.488669 1.2:-63790157 MS.gene07424:CDS
GCAACTGTTTCGGTTGAAGC+AGG 0.488742 1.2:-63794170 MS.gene07424:CDS
CAAACCAATGACCGGAAGAA+AGG 0.492984 1.2:+63790374 None:intergenic
GACACAGATGCAGAATTGCC+AGG 0.493240 1.2:-63791798 MS.gene07424:CDS
TGCAAGCAATCCTGTGGCGG+TGG 0.493660 1.2:+63789890 None:intergenic
TTGGTGAACTGGTAGAAAAC+GGG 0.495173 1.2:-63790099 MS.gene07424:CDS
GGTGGAGCCTGGAACACCGG+TGG 0.496840 1.2:-63790154 MS.gene07424:CDS
GCTCCACCCTCATAATGATC+TGG 0.502988 1.2:+63790169 None:intergenic
TCGTGGGATGTCACACTGAA+AGG 0.503362 1.2:+63791730 None:intergenic
TAGTGATCTTATTTGGGTCA+GGG 0.503772 1.2:+63789933 None:intergenic
GTTCTTGTTTCATCGCCGAT+TGG 0.503785 1.2:-63794536 MS.gene07424:CDS
GAATTGGGTACATGATCCAT+TGG 0.511270 1.2:-63791855 MS.gene07424:CDS
ATCACTAAACGTGGCCCAGA+TGG 0.514346 1.2:-63789917 MS.gene07424:CDS
GTTCCATTAACTTCGGGTCA+GGG 0.514562 1.2:+63790422 None:intergenic
CGCCACAGGATTGCTTGCAC+TGG 0.514703 1.2:-63789886 MS.gene07424:CDS
GTTTCGGTTGAAGCAGGTGC+CGG 0.515679 1.2:-63794164 MS.gene07424:CDS
CAAGCCATGAGGACCATATC+CGG 0.516438 1.2:+63790509 None:intergenic
CCGCATCTGTAATGATAGTC+CGG 0.516536 1.2:-63790528 MS.gene07424:CDS
CGTGGGATGTCACACTGAAA+GGG 0.519480 1.2:+63791731 None:intergenic
CTATTCACCAGATCATTATG+AGG 0.520724 1.2:-63790176 MS.gene07424:CDS
TGGAGCTTATCCACACCAGC+TGG 0.522748 1.2:+63790454 None:intergenic
AGATAGTGGGAGGACAGTTA+TGG 0.528309 1.2:-63790321 MS.gene07424:CDS
TTAGATTCACAATCTTCCAC+TGG 0.528340 1.2:-63794413 MS.gene07424:CDS
CCAGCTGGAGCATAATCAAA+TGG 0.539143 1.2:+63790469 None:intergenic
CATGTATTGTTTGTGTAAAG+TGG 0.539629 1.2:+63791830 None:intergenic
AAAACGACAATCCAAGAAAG+TGG 0.541268 1.2:+63794599 None:intergenic
AATGTTGTGTATTCTGTGGC+AGG 0.542105 1.2:-63791621 MS.gene07424:intron
GTTTGGCAATAGTGTAGATA+CGG 0.543709 1.2:-63794246 MS.gene07424:CDS
TCGGGTCAGGGGCATCAAGA+TGG 0.543725 1.2:+63790434 None:intergenic
TTCCAGGTATCGACAGGACC+TGG 0.544847 1.2:+63789857 None:intergenic
TTCCATTAACTTCGGGTCAG+GGG 0.544917 1.2:+63790423 None:intergenic
ACACCGGTGGGTCATGCACT+GGG 0.546027 1.2:-63790141 MS.gene07424:CDS
CCTGACAACGCATCCAATGC+CGG 0.546333 1.2:-63793990 MS.gene07424:CDS
AACCGATACCACTTCAAACT+CGG 0.546807 1.2:-63794366 MS.gene07424:CDS
GTCTACTTCCGAGTTTGAAG+TGG 0.548097 1.2:+63794358 None:intergenic
CTTCCCAGTGCATGACCCAC+CGG 0.549025 1.2:+63790138 None:intergenic
CCATTTGATTATGCTCCAGC+TGG 0.552386 1.2:-63790469 MS.gene07424:CDS
GTCATTTGAAACCGTAGGAG+GGG 0.555007 1.2:+63794103 None:intergenic
CTATAATCACACCACCGGAC+TGG 0.556126 1.2:+63794081 None:intergenic
GCGTTTCAATACCGACATGA+TGG 0.557601 1.2:-63789977 MS.gene07424:CDS
GCTGATGAGAGGGAAGACCT+TGG 0.564264 1.2:-63791684 MS.gene07424:CDS
TCCAAGAAAGTGGTCTTGGA+TGG 0.565929 1.2:+63794609 None:intergenic
AATTGGGTACATGATCCATT+GGG 0.567737 1.2:-63791854 MS.gene07424:CDS
TCATTTGAAACCGTAGGAGG+GGG 0.568322 1.2:+63794104 None:intergenic
AGACAAGTCCAAGCAGATGA+AGG 0.568935 1.2:-63790293 MS.gene07424:CDS
TGTCAGGCCTCCCATTACCC+TGG 0.571687 1.2:+63791780 None:intergenic
TGGTCATTTGAAACCGTAGG+AGG 0.577148 1.2:+63794101 None:intergenic
ACCGACATGATGGTCATCCT+GGG 0.580029 1.2:-63789967 MS.gene07424:CDS
AGTTCATTCCAGGTATCGAC+AGG 0.581656 1.2:+63789851 None:intergenic
GTGGAGCCTGGAACACCGGT+GGG 0.582467 1.2:-63790153 MS.gene07424:CDS
ACTATTGCCAAACGAAGTCG+TGG 0.582517 1.2:+63794256 None:intergenic
GAAGATTGTGAATCTAAAGA+CGG 0.584346 1.2:+63794419 None:intergenic
AAGATTATGAGAATTGGCGA+TGG 0.585427 1.2:-63791757 MS.gene07424:CDS
AAGGTTAAGCCTGTTGCACT+TGG 0.585969 1.2:-63790118 MS.gene07424:CDS
CTAAACGTGGCCCAGATGGA+AGG 0.586407 1.2:-63789913 MS.gene07424:CDS
ACGGTTTCAAATGACCAGTC+CGG 0.588034 1.2:-63794095 MS.gene07424:CDS
TGAATCTCCAATGAAAGCCA+AGG 0.588688 1.2:+63791667 None:intergenic
TTCTGGAACAGCTGTTAATG+TGG 0.596453 1.2:+63794025 None:intergenic
TGTGGAATTATCAGAAGTCG+TGG 0.596523 1.2:+63794043 None:intergenic
CTGCTTAGCAAACCAATGAC+CGG 0.598348 1.2:+63790366 None:intergenic
TGATTATGCTCCAGCTGGTG+TGG 0.603990 1.2:-63790464 MS.gene07424:CDS
TGGTGTGATTATAGCACCAA+AGG 0.606346 1.2:-63794072 MS.gene07424:CDS
TAGTCCGGATATGGTCCTCA+TGG 0.607259 1.2:-63790513 MS.gene07424:CDS
CACCAGTGCAAGCAATCCTG+TGG 0.608621 1.2:+63789884 None:intergenic
TTATTGACATCCTCGCTCGT+TGG 0.611402 1.2:+63794308 None:intergenic
CGGTGGGTCATGCACTGGGA+AGG 0.611769 1.2:-63790137 MS.gene07424:CDS
GGTTCTTCCAATTTGACGGG+TGG 0.614017 1.2:-63794143 MS.gene07424:CDS
CAATAGTAAGTCTAGTTCTG+TGG 0.616322 1.2:-63794336 MS.gene07424:CDS
TGGTGCTATAATCACACCAC+CGG 0.617286 1.2:+63794076 None:intergenic
CAGTGCAAGCAATCCTGTGG+CGG 0.618270 1.2:+63789887 None:intergenic
TTTGTGTAAAGTGGTCCCAA+TGG 0.618822 1.2:+63791839 None:intergenic
TAGTGGGAGGACAGTTATGG+TGG 0.622969 1.2:-63790318 MS.gene07424:CDS
ATCATCAAGAGAGAATATGA+AGG 0.626533 1.2:-63789818 MS.gene07424:CDS
TCACCAGATCATTATGAGGG+TGG 0.628408 1.2:-63790172 MS.gene07424:CDS
GGTCATTTGAAACCGTAGGA+GGG 0.629583 1.2:+63794102 None:intergenic
ATTGCTATCACTAGTACCAG+TGG 0.629797 1.2:+63794397 None:intergenic
TAGGCTGTGATCTGTACCAT+GGG 0.633271 1.2:-63791877 MS.gene07424:CDS
GCTACACATCCAACTTACAA+AGG 0.636013 1.2:-63790217 MS.gene07424:CDS
ACACAGATGCAGAATTGCCA+GGG 0.636339 1.2:-63791797 MS.gene07424:CDS
ATCAAGAGAGAATATGAAGG+TGG 0.637532 1.2:-63789815 MS.gene07424:CDS
ATCTTGAATAACGAGATAGT+GGG 0.646579 1.2:-63790334 MS.gene07424:CDS
TATTCACCAGATCATTATGA+GGG 0.649367 1.2:-63790175 MS.gene07424:CDS
TGTGGAACTTCCAACGAGCG+AGG 0.651120 1.2:-63794318 MS.gene07424:CDS
TTGAATAACGAGATAGTGGG+AGG 0.661822 1.2:-63790331 MS.gene07424:CDS
CCGGACTATCATTACAGATG+CGG 0.665544 1.2:+63790528 None:intergenic
CCAAATAAGATCACTAAACG+TGG 0.667609 1.2:-63789926 MS.gene07424:CDS
GATCATGTACCCAATTCCCA+TGG 0.672337 1.2:+63791861 None:intergenic
GTTTCAAATGACCAGTCCGG+TGG 0.677402 1.2:-63794092 MS.gene07424:CDS
GCCCAGGATGACCATCATGT+CGG 0.678895 1.2:+63789966 None:intergenic
GTAGGCTGTGATCTGTACCA+TGG 0.685036 1.2:-63791878 MS.gene07424:intron
CTATTGCCAAACGAAGTCGT+GGG 0.691219 1.2:+63794257 None:intergenic
GGAATTATCAGAAGTCGTGG+AGG 0.703782 1.2:+63794046 None:intergenic
AATCAATGTTGTGTATTCTG+TGG 0.709727 1.2:-63791625 MS.gene07424:CDS
AGAATTGCCAGGGTAATGGG+AGG 0.713659 1.2:-63791787 MS.gene07424:CDS
CGTCACTTTGACAAGCCATG+AGG 0.722152 1.2:+63790498 None:intergenic
GACTGGTCATTTGAAACCGT+AGG 0.734696 1.2:+63794098 None:intergenic
GTAGAGGTACCAAAGAATCG+GGG 0.738063 1.2:-63790583 MS.gene07424:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTAAAAAGAGAATAT+GGG + chr1.2:63790848-63790867 None:intergenic 10.0%
!! TAAAAATTAAAAAGAGAATA+TGG + chr1.2:63790849-63790868 None:intergenic 10.0%
!!! TTTCTTTTTATTAACATTTA+TGG + chr1.2:63793245-63793264 None:intergenic 10.0%
!! AAAAATTTCTTATTGTAAAC+AGG - chr1.2:63792445-63792464 MS.gene07424:intron 15.0%
!! AACAAATATAAAATACAAAC+AGG + chr1.2:63793138-63793157 None:intergenic 15.0%
!! ATAAAATGATTTAGAGATTA+TGG - chr1.2:63792865-63792884 MS.gene07424:intron 15.0%
!! CATATAAACATTTCTTTATT+AGG - chr1.2:63793441-63793460 MS.gene07424:intron 15.0%
!! CTCTTATTATTATTGTATTA+TGG - chr1.2:63793189-63793208 MS.gene07424:intron 15.0%
!! TTAGATAAAATAGTAATGTT+GGG + chr1.2:63790917-63790936 None:intergenic 15.0%
!! TTATTATTATTAGGTAAAAG+AGG - chr1.2:63793310-63793329 MS.gene07424:intron 15.0%
!!! ATATGCAAAGATATTATTTT+AGG - chr1.2:63793867-63793886 MS.gene07424:intron 15.0%
!!! GTTTGTATTTTATATTTGTT+TGG - chr1.2:63793138-63793157 MS.gene07424:intron 15.0%
!!! TATTTTATATTTGTTTGGTT+TGG - chr1.2:63793143-63793162 MS.gene07424:intron 15.0%
!! ATTTCTTTATTAGGTAAAAG+AGG - chr1.2:63793450-63793469 MS.gene07424:intron 20.0%
!! GTTAGATAAAATAGTAATGT+TGG + chr1.2:63790918-63790937 None:intergenic 20.0%
!! TAGATAAAATAGTAATGTTG+GGG + chr1.2:63790916-63790935 None:intergenic 20.0%
!! TATTCATTTACACATACATA+GGG - chr1.2:63793719-63793738 MS.gene07424:intron 20.0%
!!! AAAAGACTAGTTTATTAAGT+GGG - chr1.2:63791603-63791622 MS.gene07424:intron 20.0%
!!! ACATGCATTTTTCTTTTTAT+TGG + chr1.2:63793580-63793599 None:intergenic 20.0%
!!! ACTTAATAAACTAGTCTTTT+GGG + chr1.2:63791603-63791622 None:intergenic 20.0%
!!! ATTTGATCCTAGAAAATTTT+TGG - chr1.2:63792711-63792730 MS.gene07424:intron 20.0%
!!! CTTTTTATTGGAATATACTT+TGG + chr1.2:63793568-63793587 None:intergenic 20.0%
!!! TGATGTATAATTCAAAGTTT+TGG - chr1.2:63792267-63792286 MS.gene07424:intron 20.0%
! AAAACCATTTCATTATGAAC+CGG + chr1.2:63793667-63793686 None:intergenic 25.0%
! AAAAGAGATATCCTTTACAA+AGG + chr1.2:63790779-63790798 None:intergenic 25.0%
! AAAGAGATATCCTTTACAAA+GGG + chr1.2:63790778-63790797 None:intergenic 25.0%
! AAGTAAATGAGAATGAAATC+AGG - chr1.2:63793363-63793382 MS.gene07424:intron 25.0%
! ATAGTAGTACAAAACAAGAA+TGG + chr1.2:63790533-63790552 None:intergenic 25.0%
! ATTATGAACTCTCTAACAAT+AGG - chr1.2:63792936-63792955 MS.gene07424:intron 25.0%
! ATTATTAGGTAAAAGAGGAT+GGG - chr1.2:63793315-63793334 MS.gene07424:intron 25.0%
! ATTTAGTTGAGTACCTTAAT+CGG - chr1.2:63791505-63791524 MS.gene07424:intron 25.0%
! CAAAATTCCAGTAGATAAAA+GGG + chr1.2:63791659-63791678 None:intergenic 25.0%
! CAAAGACCAAAATAAAATAG+AGG + chr1.2:63791230-63791249 None:intergenic 25.0%
! GAGATGTGAATTTACTTTAT+TGG + chr1.2:63793082-63793101 None:intergenic 25.0%
! GTATTCATTTACACATACAT+AGG - chr1.2:63793718-63793737 MS.gene07424:intron 25.0%
! TAGAAGCTTAACTGAAAATA+TGG - chr1.2:63793804-63793823 MS.gene07424:intron 25.0%
! TATTATTAGGTAAAAGAGGA+TGG - chr1.2:63793314-63793333 MS.gene07424:intron 25.0%
! TTAAAAAGAGAATATGGGAA+TGG + chr1.2:63790843-63790862 None:intergenic 25.0%
! TTAATTAGCAACTGAATCAA+CGG - chr1.2:63791900-63791919 MS.gene07424:intron 25.0%
! TTATGAACTCTCTAACAATA+GGG - chr1.2:63792937-63792956 MS.gene07424:intron 25.0%
! TTTAAAAAACAAGCTAGTGT+AGG + chr1.2:63790489-63790508 None:intergenic 25.0%
!! ACTGAAAATATGGTATTTTC+AGG - chr1.2:63793814-63793833 MS.gene07424:intron 25.0%
!! CAACATTTCTTTTCTTAGTT+TGG - chr1.2:63793517-63793536 MS.gene07424:intron 25.0%
!! CTTTGTTTCAGTTATCAATT+GGG - chr1.2:63791245-63791264 MS.gene07424:intron 25.0%
!! TCTTTGTTTCAGTTATCAAT+TGG - chr1.2:63791244-63791263 MS.gene07424:intron 25.0%
!! TTGTGTTGCTATATATGTTT+GGG - chr1.2:63792376-63792395 MS.gene07424:intron 25.0%
!!! AATTTTGCTTTTGTACTTCT+GGG - chr1.2:63791927-63791946 MS.gene07424:intron 25.0%
!!! ACGTTTCATGGATATTTTTA+CGG - chr1.2:63789910-63789929 MS.gene07424:CDS 25.0%
!!! CAAAAGACTAGTTTATTAAG+TGG - chr1.2:63791602-63791621 MS.gene07424:intron 25.0%
!!! CACTTAATAAACTAGTCTTT+TGG + chr1.2:63791604-63791623 None:intergenic 25.0%
!!! CACTTTTATCTAGTTTATGT+GGG - chr1.2:63791367-63791386 MS.gene07424:intron 25.0%
!!! CTTGTTTTTTAAATGCTTCA+TGG - chr1.2:63790496-63790515 MS.gene07424:CDS 25.0%
!!! GAGTAACCTCTATTTTATTT+TGG - chr1.2:63791221-63791240 MS.gene07424:intron 25.0%
!!! GCATCAAAAATTGTTTTATG+TGG - chr1.2:63793616-63793635 MS.gene07424:intron 25.0%
!!! GTATAATTCAAAGTTTTGGT+TGG - chr1.2:63792271-63792290 MS.gene07424:intron 25.0%
!!! TAATTTTGCTTTTGTACTTC+TGG - chr1.2:63791926-63791945 MS.gene07424:intron 25.0%
AAACCATTTCATTATGAACC+GGG + chr1.2:63793666-63793685 None:intergenic 30.0%
AAATGCAGAAATTGTTGTAC+TGG + chr1.2:63793407-63793426 None:intergenic 30.0%
AATCAATGTTGTGTATTCTG+TGG - chr1.2:63792794-63792813 MS.gene07424:intron 30.0%
ATCATCAAGAGAGAATATGA+AGG - chr1.2:63794601-63794620 MS.gene07424:CDS 30.0%
ATCTTGAATAACGAGATAGT+GGG - chr1.2:63794085-63794104 MS.gene07424:CDS 30.0%
CAATGACAGCATCATTTATT+AGG - chr1.2:63791552-63791571 MS.gene07424:intron 30.0%
CAATTCTCATAATCTTTGTC+AGG + chr1.2:63792658-63792677 None:intergenic 30.0%
CATGTATTGTTTGTGTAAAG+TGG + chr1.2:63792592-63792611 None:intergenic 30.0%
CCAAAATTCCAGTAGATAAA+AGG + chr1.2:63791660-63791679 None:intergenic 30.0%
CCAATAGAAGCAACATTTAT+AGG + chr1.2:63789973-63789992 None:intergenic 30.0%
CTGACAAAGATTATGAGAAT+TGG - chr1.2:63792656-63792675 MS.gene07424:intron 30.0%
GAAGATTGTGAATCTAAAGA+CGG + chr1.2:63790003-63790022 None:intergenic 30.0%
GGAACGTAATCAAATTGATT+TGG - chr1.2:63793471-63793490 MS.gene07424:intron 30.0%
GTAAAAATATCCATGAAACG+TGG + chr1.2:63789911-63789930 None:intergenic 30.0%
GTACTAAAAACAAGCTAAAG+TGG + chr1.2:63791194-63791213 None:intergenic 30.0%
GTATTACATGAAAAGTCTGA+GGG - chr1.2:63791003-63791022 MS.gene07424:intron 30.0%
TAAATCGAAGTTGACGTTAA+TGG - chr1.2:63794408-63794427 MS.gene07424:CDS 30.0%
TATCAATTGGGCTAATTAAG+TGG - chr1.2:63791257-63791276 MS.gene07424:intron 30.0%
TATCTTGAATAACGAGATAG+TGG - chr1.2:63794084-63794103 MS.gene07424:CDS 30.0%
TATTCACCAGATCATTATGA+GGG - chr1.2:63794244-63794263 MS.gene07424:CDS 30.0%
TATTGGAATATACTTTGGCT+GGG + chr1.2:63793563-63793582 None:intergenic 30.0%
TCTAACTTCAAACTGTGATT+AGG - chr1.2:63790932-63790951 MS.gene07424:intron 30.0%
TGTATTACATGAAAAGTCTG+AGG - chr1.2:63791002-63791021 MS.gene07424:intron 30.0%
TGTATTATTGCAAACTGAAC+TGG - chr1.2:63790719-63790738 MS.gene07424:intron 30.0%
TTATTAGGTAAAAGAGGATG+GGG - chr1.2:63793316-63793335 MS.gene07424:intron 30.0%
TTATTGGAATATACTTTGGC+TGG + chr1.2:63793564-63793583 None:intergenic 30.0%
TTCTTATTGTAAACAGGTGA+CGG - chr1.2:63792451-63792470 MS.gene07424:intron 30.0%
TTTACAAAGGGAAAACTCTT+GGG + chr1.2:63790766-63790785 None:intergenic 30.0%
TTTCATTCTCATTTACTTCC+TGG + chr1.2:63793361-63793380 None:intergenic 30.0%
! ATCAGCTCCAAAAATTTTCT+AGG + chr1.2:63792721-63792740 None:intergenic 30.0%
! CACGTTTAGTGATCTTATTT+GGG + chr1.2:63794495-63794514 None:intergenic 30.0%
! CATTTACAGTTTGCTTTGTT+TGG - chr1.2:63793044-63793063 MS.gene07424:intron 30.0%
! CCTATAAATGTTGCTTCTAT+TGG - chr1.2:63789970-63789989 MS.gene07424:CDS 30.0%
! CCTTTTATCTACTGGAATTT+TGG - chr1.2:63791657-63791676 MS.gene07424:CDS 30.0%
! CTTGTGTTGCTATATATGTT+TGG - chr1.2:63792375-63792394 MS.gene07424:intron 30.0%
! GTCAATTTGATAGTTGTACA+TGG + chr1.2:63790808-63790827 None:intergenic 30.0%
! TTCTTTACTTCACTCTCTTT+TGG - chr1.2:63790582-63790601 MS.gene07424:CDS 30.0%
! TTGTCTATATTTTTCTCCGA+GGG - chr1.2:63791143-63791162 MS.gene07424:intron 30.0%
! TTTATTTGTAGCCTTTTCCA+TGG + chr1.2:63794392-63794411 None:intergenic 30.0%
!! CATGGATATTTTTACGGTAT+AGG - chr1.2:63789916-63789935 MS.gene07424:CDS 30.0%
!! GCACTTTTATCTAGTTTATG+TGG - chr1.2:63791366-63791385 MS.gene07424:intron 30.0%
!! TACACAACATTGATTCCATT+TGG + chr1.2:63792789-63792808 None:intergenic 30.0%
!!! AATAAACTAGTCTTTTGGGT+TGG + chr1.2:63791599-63791618 None:intergenic 30.0%
!!! AATATGGTATTTTCAGGTAG+AGG - chr1.2:63793820-63793839 MS.gene07424:intron 30.0%
!!! AATTTTCTAGGATCAAATCG+TGG + chr1.2:63792709-63792728 None:intergenic 30.0%
!!! ATGAGTGTTTTTTTGTTAGG+TGG + chr1.2:63790964-63790983 None:intergenic 30.0%
!!! ATTTTCTAGGATCAAATCGT+GGG + chr1.2:63792708-63792727 None:intergenic 30.0%
!!! GCTATGAGTGTTTTTTTGTT+AGG + chr1.2:63790967-63790986 None:intergenic 30.0%
AAAACGACAATCCAAGAAAG+TGG + chr1.2:63789823-63789842 None:intergenic 35.0%
AACTTCAAGTGCAACTGTTT+CGG - chr1.2:63790239-63790258 MS.gene07424:CDS 35.0%
AAGAGAATATGGGAATGGAA+AGG + chr1.2:63790838-63790857 None:intergenic 35.0%
AAGATTATGAGAATTGGCGA+TGG - chr1.2:63792662-63792681 MS.gene07424:intron 35.0%
AATTGGGTACATGATCCATT+GGG - chr1.2:63792565-63792584 MS.gene07424:intron 35.0%
ATACCCGGTTCATAATGAAA+TGG - chr1.2:63793660-63793679 MS.gene07424:intron 35.0%
ATCAAATGCATGCTGTTGAA+CGG + chr1.2:63793693-63793712 None:intergenic 35.0%
ATCAAGAGAGAATATGAAGG+TGG - chr1.2:63794604-63794623 MS.gene07424:CDS 35.0%
ATTTCATTATGAACCGGGTA+TGG + chr1.2:63793661-63793680 None:intergenic 35.0%
CCAAATAAGATCACTAAACG+TGG - chr1.2:63794493-63794512 MS.gene07424:CDS 35.0%
CCACGTTTAGTGATCTTATT+TGG + chr1.2:63794496-63794515 None:intergenic 35.0%
CCATGCAAAACAGATCAATA+AGG + chr1.2:63792842-63792861 None:intergenic 35.0%
CTAAAAACAAGCTAAAGTGG+TGG + chr1.2:63791191-63791210 None:intergenic 35.0%
CTATTCACCAGATCATTATG+AGG - chr1.2:63794243-63794262 MS.gene07424:CDS 35.0%
CTCATAATGATCTGGTGAAT+AGG + chr1.2:63794245-63794264 None:intergenic 35.0%
CTGTTCATTTCAGTTTCTCT+AGG + chr1.2:63790670-63790689 None:intergenic 35.0%
CTTTACAAAGGGAAAACTCT+TGG + chr1.2:63790767-63790786 None:intergenic 35.0%
GGATATGTTCCATTAACTTC+GGG + chr1.2:63794006-63794025 None:intergenic 35.0%
GGGATATGTTCCATTAACTT+CGG + chr1.2:63794007-63794026 None:intergenic 35.0%
GGTGATTTATTAGGTAAACC+AGG - chr1.2:63793340-63793359 MS.gene07424:intron 35.0%
GTAACCTGAATTAACTGAAC+CGG + chr1.2:63790451-63790470 None:intergenic 35.0%
GTACTCAACTAAATACCGAT+TGG + chr1.2:63791499-63791518 None:intergenic 35.0%
GTTGAATTCACAGTAGTTTC+AGG - chr1.2:63792220-63792239 MS.gene07424:intron 35.0%
GTTTGGCAATAGTGTAGATA+CGG - chr1.2:63790173-63790192 MS.gene07424:CDS 35.0%
TATTAGGACTTATGTCCATG+AGG - chr1.2:63791568-63791587 MS.gene07424:intron 35.0%
TATTGTCCATTCTGTTGTGT+AGG - chr1.2:63792523-63792542 MS.gene07424:intron 35.0%
TCTGAGAAGTTAGATGTATC+TGG - chr1.2:63789943-63789962 MS.gene07424:CDS 35.0%
TTAGATTCACAATCTTCCAC+TGG - chr1.2:63790006-63790025 MS.gene07424:CDS 35.0%
TTCATGCATTTGAAGGATTC+AGG - chr1.2:63791068-63791087 MS.gene07424:intron 35.0%
! AAAATGCATGTTTTGCCTCT+TGG - chr1.2:63793589-63793608 MS.gene07424:intron 35.0%
! CAAGAGTTTTCCCTTTGTAA+AGG - chr1.2:63790765-63790784 MS.gene07424:intron 35.0%
! CCTTATTGATCTGTTTTGCA+TGG - chr1.2:63792839-63792858 MS.gene07424:intron 35.0%
! GGTATTGTCATGATGATGTT+TGG - chr1.2:63791830-63791849 MS.gene07424:CDS 35.0%
! GTTGTCTATATTTTTCTCCG+AGG - chr1.2:63791142-63791161 MS.gene07424:intron 35.0%
! GTTTGAAATTACTCTGTGTG+AGG - chr1.2:63792489-63792508 MS.gene07424:intron 35.0%
! TAGTGATCTTATTTGGGTCA+GGG + chr1.2:63794489-63794508 None:intergenic 35.0%
! TTAGTGATCTTATTTGGGTC+AGG + chr1.2:63794490-63794509 None:intergenic 35.0%
!! ACATATCCCAAATTTTGACG+TGG - chr1.2:63794018-63794037 MS.gene07424:CDS 35.0%
!! CAATAGTAAGTCTAGTTCTG+TGG - chr1.2:63790083-63790102 MS.gene07424:CDS 35.0%
!!! AAATTTTTGGAGCTGATGAG+AGG - chr1.2:63792724-63792743 MS.gene07424:intron 35.0%
!!! AATTTTTGGAGCTGATGAGA+GGG - chr1.2:63792725-63792744 MS.gene07424:intron 35.0%
!!! TCTTGGATTGTCGTTTTAGT+AGG - chr1.2:63789826-63789845 MS.gene07424:CDS 35.0%
AAAAGACCAGTCCATTAGGT+TGG - chr1.2:63791315-63791334 MS.gene07424:intron 40.0%
AAATACGATGCATGAGCAAC+AGG - chr1.2:63794348-63794367 MS.gene07424:CDS 40.0%
AACCGATACCACTTCAAACT+CGG - chr1.2:63790053-63790072 MS.gene07424:CDS 40.0%
AATGTTGTGTATTCTGTGGC+AGG - chr1.2:63792798-63792817 MS.gene07424:intron 40.0%
ACAAAGGTCTCGCAATTGTT+CGG - chr1.2:63794218-63794237 MS.gene07424:CDS 40.0%
ACAATCCAAGAAAGTGGTCT+TGG + chr1.2:63789817-63789836 None:intergenic 40.0%
ACTCAAAAGACCAGTCCATT+AGG - chr1.2:63791311-63791330 MS.gene07424:intron 40.0%
AGAATATGGGAATGGAAAGG+AGG + chr1.2:63790835-63790854 None:intergenic 40.0%
AGGACAACCACGTCAAAATT+TGG + chr1.2:63794028-63794047 None:intergenic 40.0%
AGTGAAACTGACGTAGAAGT+CGG + chr1.2:63791425-63791444 None:intergenic 40.0%
AGTGTGAGTATGTATGTGTG+CGG + chr1.2:63792339-63792358 None:intergenic 40.0%
ATCCTTCAAATGCATGAAGC+AGG + chr1.2:63791066-63791085 None:intergenic 40.0%
ATGATGCTGTCATTGAGAGT+TGG + chr1.2:63791547-63791566 None:intergenic 40.0%
ATTGCGAGACCTTTGTAAGT+TGG + chr1.2:63794214-63794233 None:intergenic 40.0%
ATTGCTATCACTAGTACCAG+TGG + chr1.2:63790025-63790044 None:intergenic 40.0%
CAGAAAAAACCCACTTGAGT+TGG - chr1.2:63792004-63792023 MS.gene07424:intron 40.0%
CTACGTCAGTTTCACTCTAT+CGG - chr1.2:63791429-63791448 MS.gene07424:intron 40.0%
CTGTAATGATAGTCCGGATA+TGG - chr1.2:63793897-63793916 MS.gene07424:intron 40.0%
CTTGGTGAACTGGTAGAAAA+CGG - chr1.2:63794319-63794338 MS.gene07424:CDS 40.0%
GAAACAACTTCTGCAACATG+TGG - chr1.2:63793279-63793298 MS.gene07424:intron 40.0%
GAATATACTTTGGCTGGGAA+AGG + chr1.2:63793558-63793577 None:intergenic 40.0%
GAATTGGGTACATGATCCAT+TGG - chr1.2:63792564-63792583 MS.gene07424:intron 40.0%
GCTACACATCCAACTTACAA+AGG - chr1.2:63794202-63794221 MS.gene07424:CDS 40.0%
GGAAATCTCATTAAAGCCCT+CGG + chr1.2:63791162-63791181 None:intergenic 40.0%
GGACAACCACGTCAAAATTT+GGG + chr1.2:63794027-63794046 None:intergenic 40.0%
GTGCTTAGCAACAAGAAACA+AGG + chr1.2:63791868-63791887 None:intergenic 40.0%
TACATGAAAAGTCTGAGGGA+GGG - chr1.2:63791007-63791026 MS.gene07424:intron 40.0%
TACCTGGAATGAACTTGTCT+TGG - chr1.2:63794576-63794595 MS.gene07424:CDS 40.0%
TCTAATACCACCCGTCAAAT+TGG + chr1.2:63790286-63790305 None:intergenic 40.0%
TGAATCTCCAATGAAAGCCA+AGG + chr1.2:63792755-63792774 None:intergenic 40.0%
TGAATTAACTGAACCGGCAT+TGG + chr1.2:63790445-63790464 None:intergenic 40.0%
TGATCTGTACCATGGGAATT+GGG - chr1.2:63792549-63792568 MS.gene07424:intron 40.0%
TGATGCTGTCATTGAGAGTT+GGG + chr1.2:63791546-63791565 None:intergenic 40.0%
TGATTCGATTATGCGTGTCT+CGG + chr1.2:63793026-63793045 None:intergenic 40.0%
TGGTGTGATTATAGCACCAA+AGG - chr1.2:63790347-63790366 MS.gene07424:CDS 40.0%
TGTGAGTGCATGTATATGTG+AGG + chr1.2:63792311-63792330 None:intergenic 40.0%
TGTGGAATTATCAGAAGTCG+TGG + chr1.2:63790379-63790398 None:intergenic 40.0%
TTACATGAAAAGTCTGAGGG+AGG - chr1.2:63791006-63791025 MS.gene07424:intron 40.0%
TTACGATTTCCCCGATTCTT+TGG + chr1.2:63793848-63793867 None:intergenic 40.0%
TTCAGTAGCTCGAAACCAAA+TGG - chr1.2:63792771-63792790 MS.gene07424:intron 40.0%
TTCCAAGACAAGTTCATTCC+AGG + chr1.2:63794581-63794600 None:intergenic 40.0%
TTCTGCATCTGTGTCAATAC+AGG + chr1.2:63792616-63792635 None:intergenic 40.0%
TTGAGCAGGCAAACTAGTAT+TGG + chr1.2:63790199-63790218 None:intergenic 40.0%
TTGGTGAACTGGTAGAAAAC+GGG - chr1.2:63794320-63794339 MS.gene07424:CDS 40.0%
TTGTTAGACTTAAGCCCATG+AGG - chr1.2:63791280-63791299 MS.gene07424:intron 40.0%
TTTGGCGTGTTTGTTTGGTA+GGG - chr1.2:63791675-63791694 MS.gene07424:CDS 40.0%
TTTGTGTAAAGTGGTCCCAA+TGG + chr1.2:63792583-63792602 None:intergenic 40.0%
! ACTTGTGAATTTGCTTGAGC+AGG + chr1.2:63790213-63790232 None:intergenic 40.0%
! ATTTTTGATGCAGTGCCAAG+AGG + chr1.2:63793607-63793626 None:intergenic 40.0%
! CTCTGTGTGAGGCTTTTAAT+TGG - chr1.2:63792500-63792519 MS.gene07424:intron 40.0%
! TCACAGTAGTTTCAGGTGTA+TGG - chr1.2:63792227-63792246 MS.gene07424:intron 40.0%
! TTCCGAGTTTGAAGTGGTAT+CGG + chr1.2:63790058-63790077 None:intergenic 40.0%
! TTTTGGCGTGTTTGTTTGGT+AGG - chr1.2:63791674-63791693 MS.gene07424:CDS 40.0%
!! AATGCCGGTTCAGTTAATTC+AGG - chr1.2:63790444-63790463 MS.gene07424:CDS 40.0%
!! AGGTAGAGGTACCAAAGAAT+CGG - chr1.2:63793834-63793853 MS.gene07424:intron 40.0%
!! CTAGATAAAAGTGCTCAGTG+TGG + chr1.2:63791360-63791379 None:intergenic 40.0%
!! GGAATTTTGGCGTGTTTGTT+TGG - chr1.2:63791670-63791689 MS.gene07424:CDS 40.0%
!! TCAGGCTTCTTTACTGATTC+TGG + chr1.2:63790414-63790433 None:intergenic 40.0%
!! TTCTGGAACAGCTGTTAATG+TGG + chr1.2:63790397-63790416 None:intergenic 40.0%
!! TTGAATAACGAGATAGTGGG+AGG - chr1.2:63794088-63794107 MS.gene07424:CDS 40.0%
!!! AATGGACTGGTCTTTTGAGT+TGG + chr1.2:63791311-63791330 None:intergenic 40.0%
!!! ATGGACTGGTCTTTTGAGTT+GGG + chr1.2:63791310-63791329 None:intergenic 40.0%
AAGGTTAAGCCTGTTGCACT+TGG - chr1.2:63794301-63794320 MS.gene07424:CDS 45.0%
ACACAGATGCAGAATTGCCA+GGG - chr1.2:63792622-63792641 MS.gene07424:intron 45.0%
ACCATCCAAGACCACTTTCT+TGG - chr1.2:63789809-63789828 MS.gene07424:CDS 45.0%
ACCCGTCAAATTGGAAGAAC+CGG + chr1.2:63790277-63790296 None:intergenic 45.0%
ACGGTTTCAAATGACCAGTC+CGG - chr1.2:63790324-63790343 MS.gene07424:CDS 45.0%
ACTATTGCCAAACGAAGTCG+TGG + chr1.2:63790166-63790185 None:intergenic 45.0%
AGACAAGTCCAAGCAGATGA+AGG - chr1.2:63794126-63794145 MS.gene07424:CDS 45.0%
ATCAAACCTGAGACCTTGAG+AGG + chr1.2:63792065-63792084 None:intergenic 45.0%
ATGCAGAATTGCCAGGGTAA+TGG - chr1.2:63792628-63792647 MS.gene07424:intron 45.0%
ATGCATGAGCAACAGGTTAC+AGG - chr1.2:63794355-63794374 MS.gene07424:CDS 45.0%
CAAACCAATGACCGGAAGAA+AGG + chr1.2:63794048-63794067 None:intergenic 45.0%
CAACACAAGTGTGAGTGTGT+CGG + chr1.2:63792364-63792383 None:intergenic 45.0%
CCAGCTGGAGCATAATCAAA+TGG + chr1.2:63793953-63793972 None:intergenic 45.0%
CCAGGACAGAAGTAATGGTT+CGG + chr1.2:63791753-63791772 None:intergenic 45.0%
CCATTTGATTATGCTCCAGC+TGG - chr1.2:63793950-63793969 MS.gene07424:intron 45.0%
CCGCATCTGTAATGATAGTC+CGG - chr1.2:63793891-63793910 MS.gene07424:intron 45.0%
CCGGACTATCATTACAGATG+CGG + chr1.2:63793894-63793913 None:intergenic 45.0%
CTATTGCCAAACGAAGTCGT+GGG + chr1.2:63790165-63790184 None:intergenic 45.0%
CTGCTTAGCAAACCAATGAC+CGG + chr1.2:63794056-63794075 None:intergenic 45.0%
GAACTCTCTAACAATAGGGC+TGG - chr1.2:63792941-63792960 MS.gene07424:intron 45.0%
GACTCTCTAATCACCATGAC+AGG - chr1.2:63791804-63791823 MS.gene07424:CDS 45.0%
GATCATGTACCCAATTCCCA+TGG + chr1.2:63792561-63792580 None:intergenic 45.0%
GCGTTTCAATACCGACATGA+TGG - chr1.2:63794442-63794461 MS.gene07424:CDS 45.0%
GGAATTATCAGAAGTCGTGG+AGG + chr1.2:63790376-63790395 None:intergenic 45.0%
GGATGGGGAGGTGATTTATT+AGG - chr1.2:63793331-63793350 MS.gene07424:intron 45.0%
GTCCTGCTTCATGCATTTGA+AGG - chr1.2:63791061-63791080 MS.gene07424:intron 45.0%
GTCTACTTCCGAGTTTGAAG+TGG + chr1.2:63790064-63790083 None:intergenic 45.0%
GTCTCAGGTTTGATTCTCTC+CGG - chr1.2:63792071-63792090 MS.gene07424:intron 45.0%
GTGATCTGTACCATGGGAAT+TGG - chr1.2:63792548-63792567 MS.gene07424:intron 45.0%
GTGTGAGTATGTATGTGTGC+GGG + chr1.2:63792338-63792357 None:intergenic 45.0%
GTTCCATTAACTTCGGGTCA+GGG + chr1.2:63794000-63794019 None:intergenic 45.0%
GTTGTTGACCTTCATCTGCT+TGG + chr1.2:63794137-63794156 None:intergenic 45.0%
TAGGCTGTGATCTGTACCAT+GGG - chr1.2:63792542-63792561 MS.gene07424:intron 45.0%
TATCCATGCTTGTGTGTGCA+TGG - chr1.2:63793749-63793768 MS.gene07424:intron 45.0%
TCACAGCCTACACAACAGAA+TGG + chr1.2:63792532-63792551 None:intergenic 45.0%
TCACCAGATCATTATGAGGG+TGG - chr1.2:63794247-63794266 MS.gene07424:CDS 45.0%
TCTAATCACCATGACAGGAG+TGG - chr1.2:63791809-63791828 MS.gene07424:CDS 45.0%
TGACAATACCACTCCTGTCA+TGG + chr1.2:63791820-63791839 None:intergenic 45.0%
TGAGAGTTGGGTCACAGAAA+GGG + chr1.2:63791534-63791553 None:intergenic 45.0%
TGCACACACAAGCATGGATA+TGG + chr1.2:63793749-63793768 None:intergenic 45.0%
TGCAGAATTGCCAGGGTAAT+GGG - chr1.2:63792629-63792648 MS.gene07424:intron 45.0%
TGTTCCATTAACTTCGGGTC+AGG + chr1.2:63794001-63794020 None:intergenic 45.0%
TTAGGTAAAAGAGGATGGGG+AGG - chr1.2:63793319-63793338 MS.gene07424:intron 45.0%
TTATTGACATCCTCGCTCGT+TGG + chr1.2:63790114-63790133 None:intergenic 45.0%
TTCATCTGCTTGGACTTGTC+TGG + chr1.2:63794127-63794146 None:intergenic 45.0%
TTCCATTAACTTCGGGTCAG+GGG + chr1.2:63793999-63794018 None:intergenic 45.0%
TTGAGAGTTGGGTCACAGAA+AGG + chr1.2:63791535-63791554 None:intergenic 45.0%
TTGTCCTTTCTTCCGGTCAT+TGG - chr1.2:63794041-63794060 MS.gene07424:CDS 45.0%
! ACAGAAAGGGCTACCGATTA+AGG + chr1.2:63791521-63791540 None:intergenic 45.0%
! ACGTAGAAGTCGGCTCTTAA+AGG + chr1.2:63791415-63791434 None:intergenic 45.0%
! ATTCTCTCCGGTGCCAATTT+CGG - chr1.2:63792083-63792102 MS.gene07424:intron 45.0%
! CATAGCTTAAGTACCGCACT+CGG - chr1.2:63791633-63791652 MS.gene07424:CDS 45.0%
! CGTAGAAGTCGGCTCTTAAA+GGG + chr1.2:63791414-63791433 None:intergenic 45.0%
! GACTGGTCATTTGAAACCGT+AGG + chr1.2:63790324-63790343 None:intergenic 45.0%
! GGTCATTTGAAACCGTAGGA+GGG + chr1.2:63790320-63790339 None:intergenic 45.0%
! GTAGAAGTCGGCTCTTAAAG+GGG + chr1.2:63791413-63791432 None:intergenic 45.0%
! GTCATTTGAAACCGTAGGAG+GGG + chr1.2:63790319-63790338 None:intergenic 45.0%
! GTTCTTGTTTCATCGCCGAT+TGG - chr1.2:63789883-63789902 MS.gene07424:CDS 45.0%
! TAGAAGTCGGCTCTTAAAGG+GGG + chr1.2:63791412-63791431 None:intergenic 45.0%
! TCATTTGAAACCGTAGGAGG+GGG + chr1.2:63790318-63790337 None:intergenic 45.0%
! TCCAAGAAAGTGGTCTTGGA+TGG + chr1.2:63789813-63789832 None:intergenic 45.0%
! TGCTTTTGTACTTCTGGGCA+AGG - chr1.2:63791932-63791951 MS.gene07424:intron 45.0%
! TGGTCATTTGAAACCGTAGG+AGG + chr1.2:63790321-63790340 None:intergenic 45.0%
! TTTTAACCGCGCCATGGAAA+AGG - chr1.2:63794378-63794397 MS.gene07424:CDS 45.0%
!! AAAACCCACTTGAGTTGGTC+TGG - chr1.2:63792009-63792028 MS.gene07424:intron 45.0%
!! AAGCTAAAGTGGTGGATGCA+AGG + chr1.2:63791183-63791202 None:intergenic 45.0%
!! AGATAGTGGGAGGACAGTTA+TGG - chr1.2:63794098-63794117 MS.gene07424:CDS 45.0%
!! AGTTCATTCCAGGTATCGAC+AGG + chr1.2:63794571-63794590 None:intergenic 45.0%
!! GGTAGAGGTACCAAAGAATC+GGG - chr1.2:63793835-63793854 MS.gene07424:intron 45.0%
!! GTAGAGGTACCAAAGAATCG+GGG - chr1.2:63793836-63793855 MS.gene07424:intron 45.0%
!! TGCCGGTTCTTCCAATTTGA+CGG - chr1.2:63790272-63790291 MS.gene07424:CDS 45.0%
!! TGGTGCTATAATCACACCAC+CGG + chr1.2:63790346-63790365 None:intergenic 45.0%
!! TTGAGTTGGGCTATCCTCAT+GGG + chr1.2:63791297-63791316 None:intergenic 45.0%
!! TTTGAGTTGGGCTATCCTCA+TGG + chr1.2:63791298-63791317 None:intergenic 45.0%
!! GATTTATTATTATTATTATT+AGG - chr1.2:63793301-63793320 MS.gene07424:intron 5.0%
!!! TTTTTAAAAATTTGAATAAT+TGG + chr1.2:63792200-63792219 None:intergenic 5.0%
AAAGAGGAAAGGGCTACCGT+TGG + chr1.2:63791462-63791481 None:intergenic 50.0%
AACGGTAGCCCTTTCCTCTT+TGG - chr1.2:63791461-63791480 MS.gene07424:intron 50.0%
AACTGAAGAACCCCCTCCTA+CGG - chr1.2:63790305-63790324 MS.gene07424:CDS 50.0%
AAGAGGAAAGGGCTACCGTT+GGG + chr1.2:63791461-63791480 None:intergenic 50.0%
ACCACCAGACCAACTCAAGT+GGG + chr1.2:63792016-63792035 None:intergenic 50.0%
ACCAGTTCACCAAGTGCAAC+AGG + chr1.2:63794313-63794332 None:intergenic 50.0%
ACCGACATGATGGTCATCCT+GGG - chr1.2:63794452-63794471 MS.gene07424:CDS 50.0%
ATCACTAAACGTGGCCCAGA+TGG - chr1.2:63794502-63794521 MS.gene07424:CDS 50.0%
ATCATTATGAGGGTGGAGCC+TGG - chr1.2:63794254-63794273 MS.gene07424:CDS 50.0%
CAAGCCATGAGGACCATATC+CGG + chr1.2:63793913-63793932 None:intergenic 50.0%
CAGTGTGGTACTAAGCCATG+AGG + chr1.2:63791345-63791364 None:intergenic 50.0%
CATGAGGCTCTCCAACCTAA+TGG + chr1.2:63791329-63791348 None:intergenic 50.0%
CCAAAACCCACGACTTCGTT+TGG - chr1.2:63790156-63790175 MS.gene07424:CDS 50.0%
CCAAACTAGCCCACCGAAAT+TGG + chr1.2:63792099-63792118 None:intergenic 50.0%
CCATGAAACGTGGCACCAAT+CGG + chr1.2:63789901-63789920 None:intergenic 50.0%
CCGAACCATTACTTCTGTCC+TGG - chr1.2:63791750-63791769 MS.gene07424:CDS 50.0%
CGAGTGCAAACTATCCCAGA+AGG + chr1.2:63791776-63791795 None:intergenic 50.0%
CGTGGGATGTCACACTGAAA+GGG + chr1.2:63792691-63792710 None:intergenic 50.0%
CTATAATCACACCACCGGAC+TGG + chr1.2:63790341-63790360 None:intergenic 50.0%
GAAGGCCAGGACAGAAGTAA+TGG + chr1.2:63791758-63791777 None:intergenic 50.0%
GAAGTCGTGGAGGTTTCCTT+TGG + chr1.2:63790366-63790385 None:intergenic 50.0%
GACACAGATGCAGAATTGCC+AGG - chr1.2:63792621-63792640 MS.gene07424:intron 50.0%
GACGTGGTTGTCCTTTCTTC+CGG - chr1.2:63794034-63794053 MS.gene07424:CDS 50.0%
GCAACTGTTTCGGTTGAAGC+AGG - chr1.2:63790249-63790268 MS.gene07424:CDS 50.0%
GCTCCACCCTCATAATGATC+TGG + chr1.2:63794253-63794272 None:intergenic 50.0%
GGTTCTTCCAATTTGACGGG+TGG - chr1.2:63790276-63790295 MS.gene07424:CDS 50.0%
GTAGATAAAAGGGCCGAGTG+CGG + chr1.2:63791649-63791668 None:intergenic 50.0%
GTAGGCTGTGATCTGTACCA+TGG - chr1.2:63792541-63792560 MS.gene07424:intron 50.0%
GTTTCAAATGACCAGTCCGG+TGG - chr1.2:63790327-63790346 MS.gene07424:CDS 50.0%
TACCGACATGATGGTCATCC+TGG - chr1.2:63794451-63794470 MS.gene07424:CDS 50.0%
TAGTCCGGATATGGTCCTCA+TGG - chr1.2:63793906-63793925 MS.gene07424:intron 50.0%
TAGTGGGAGGACAGTTATGG+TGG - chr1.2:63794101-63794120 MS.gene07424:CDS 50.0%
TCGTGGGATGTCACACTGAA+AGG + chr1.2:63792692-63792711 None:intergenic 50.0%
TGAAGCCGCCAAAGAGGAAA+GGG + chr1.2:63791472-63791491 None:intergenic 50.0%
TGATTATGCTCCAGCTGGTG+TGG - chr1.2:63793955-63793974 MS.gene07424:intron 50.0%
TGCTGCATATGCACCATACC+CGG - chr1.2:63793645-63793664 MS.gene07424:intron 50.0%
! AAGGGGGTGATGGCAATGTT+AGG + chr1.2:63791396-63791415 None:intergenic 50.0%
! CACTCGGCCCTTTTATCTAC+TGG - chr1.2:63791649-63791668 MS.gene07424:CDS 50.0%
! CCAAACGAAGTCGTGGGTTT+TGG + chr1.2:63790159-63790178 None:intergenic 50.0%
! CGTCACTTTGACAAGCCATG+AGG + chr1.2:63793924-63793943 None:intergenic 50.0%
! GCCGGTTCTTCCAATTTGAC+GGG - chr1.2:63790273-63790292 MS.gene07424:CDS 50.0%
! GGATAGTTTGCACTCGAGTC+TGG - chr1.2:63791780-63791799 MS.gene07424:CDS 50.0%
! GGGAAGACCTTGGCTTTCAT+TGG - chr1.2:63792745-63792764 MS.gene07424:intron 50.0%
! TACTTCTGTCCTGGCCTTCT+GGG - chr1.2:63791759-63791778 MS.gene07424:CDS 50.0%
! TTACTTCTGTCCTGGCCTTC+TGG - chr1.2:63791758-63791777 MS.gene07424:CDS 50.0%
! TTGTAGCCTTTTCCATGGCG+CGG + chr1.2:63794387-63794406 None:intergenic 50.0%
!! AACGAAGTCGTGGGTTTTGG+TGG + chr1.2:63790156-63790175 None:intergenic 50.0%
!! AGAATTGCCAGGGTAATGGG+AGG - chr1.2:63792632-63792651 MS.gene07424:intron 50.0%
!! CATTAGGTTGGAGAGCCTCA+TGG - chr1.2:63791327-63791346 MS.gene07424:intron 50.0%
!! CCAATTTCGGTGGGCTAGTT+TGG - chr1.2:63792096-63792115 MS.gene07424:intron 50.0%
!! TACAGGTTTTAACCGCGCCA+TGG - chr1.2:63794372-63794391 MS.gene07424:CDS 50.0%
!! TTGAGTTGGTCTGGTGGTGT+TGG - chr1.2:63792018-63792037 MS.gene07424:intron 50.0%
!! TTTGGGTTGGACTCTCCTCA+TGG + chr1.2:63791586-63791605 None:intergenic 50.0%
ATGGTCATCCTGGGCCTTAC+AGG - chr1.2:63794461-63794480 MS.gene07424:CDS 55.0%
CACCACCAGACCAACTCAAG+TGG + chr1.2:63792017-63792036 None:intergenic 55.0%
CACCAGTGCAAGCAATCCTG+TGG + chr1.2:63794538-63794557 None:intergenic 55.0%
CAGTGCAAGCAATCCTGTGG+CGG + chr1.2:63794535-63794554 None:intergenic 55.0%
CCTGACAACGCATCCAATGC+CGG - chr1.2:63790429-63790448 MS.gene07424:CDS 55.0%
CTAAACGTGGCCCAGATGGA+AGG - chr1.2:63794506-63794525 MS.gene07424:CDS 55.0%
GCAAACTATCCCAGAAGGCC+AGG + chr1.2:63791771-63791790 None:intergenic 55.0%
GCACCATGCACACACAAGCA+TGG + chr1.2:63793755-63793774 None:intergenic 55.0%
GCCCAGGATGACCATCATGT+CGG + chr1.2:63794456-63794475 None:intergenic 55.0%
GCTGATGAGAGGGAAGACCT+TGG - chr1.2:63792735-63792754 MS.gene07424:intron 55.0%
GGTAGCCCTTTCCTCTTTGG+CGG - chr1.2:63791464-63791483 MS.gene07424:intron 55.0%
GTGAAGCCGCCAAAGAGGAA+AGG + chr1.2:63791473-63791492 None:intergenic 55.0%
GTTTCGGTTGAAGCAGGTGC+CGG - chr1.2:63790255-63790274 MS.gene07424:CDS 55.0%
TAGCCCACCGAAATTGGCAC+CGG + chr1.2:63792093-63792112 None:intergenic 55.0%
TCGGCTCTTAAAGGGGGTGA+TGG + chr1.2:63791406-63791425 None:intergenic 55.0%
TGCCCCTGACCCGAAGTTAA+TGG - chr1.2:63793994-63794013 MS.gene07424:CDS 55.0%
TGGAGCTTATCCACACCAGC+TGG + chr1.2:63793968-63793987 None:intergenic 55.0%
TGGCGGCTTCACTCACCAAT+CGG - chr1.2:63791481-63791500 MS.gene07424:intron 55.0%
TGTGCTCCTCTCAAGGTCTC+AGG - chr1.2:63792056-63792075 MS.gene07424:intron 55.0%
TGTGGAACTTCCAACGAGCG+AGG - chr1.2:63790101-63790120 MS.gene07424:CDS 55.0%
TTTGGGTCAGGGCTCCTGTA+AGG + chr1.2:63794478-63794497 None:intergenic 55.0%
! GCCTGTTGCACTTGGTGAAC+TGG - chr1.2:63794309-63794328 MS.gene07424:CDS 55.0%
! GGCTCTCCAACCTAATGGAC+TGG + chr1.2:63791324-63791343 None:intergenic 55.0%
! TCTCCGGTGCCAATTTCGGT+GGG - chr1.2:63792087-63792106 MS.gene07424:intron 55.0%
!! ACCCACTTGAGTTGGTCTGG+TGG - chr1.2:63792012-63792031 MS.gene07424:intron 55.0%
!! CCGATTGGTGCCACGTTTCA+TGG - chr1.2:63789898-63789917 MS.gene07424:CDS 55.0%
!! CTCTATCGGCACTGACCCAA+CGG - chr1.2:63791443-63791462 MS.gene07424:intron 55.0%
!! TGGTCTGGTGGTGTTGGCTT+GGG - chr1.2:63792024-63792043 MS.gene07424:intron 55.0%
!! TTCCAGGTATCGACAGGACC+TGG + chr1.2:63794565-63794584 None:intergenic 55.0%
!! TTGGTCTGGTGGTGTTGGCT+TGG - chr1.2:63792023-63792042 MS.gene07424:intron 55.0%
AACACCGGTGGGTCATGCAC+TGG - chr1.2:63794277-63794296 MS.gene07424:CDS 60.0%
ACACCGGTGGGTCATGCACT+GGG - chr1.2:63794278-63794297 MS.gene07424:CDS 60.0%
CGCCACAGGATTGCTTGCAC+TGG - chr1.2:63794533-63794552 MS.gene07424:CDS 60.0%
CTCGGAGTGTGCTCCTCTCA+AGG - chr1.2:63792049-63792068 MS.gene07424:intron 60.0%
CTTCCCAGTGCATGACCCAC+CGG + chr1.2:63794284-63794303 None:intergenic 60.0%
GGTGAGTGAAGCCGCCAAAG+AGG + chr1.2:63791478-63791497 None:intergenic 60.0%
TGCAAGCAATCCTGTGGCGG+TGG + chr1.2:63794532-63794551 None:intergenic 60.0%
TGCCAGGTCCTGTCGATACC+TGG - chr1.2:63794560-63794579 MS.gene07424:CDS 60.0%
TGTCAGGCCTCCCATTACCC+TGG + chr1.2:63792642-63792661 None:intergenic 60.0%
! CCGGCATTGGATGCGTTGTC+AGG + chr1.2:63790432-63790451 None:intergenic 60.0%
! CTCTCCGGTGCCAATTTCGG+TGG - chr1.2:63792086-63792105 MS.gene07424:intron 60.0%
! CTTGAGAGGAGCACACTCCG+AGG + chr1.2:63792051-63792070 None:intergenic 60.0%
! TGCTTGCACTGGTGCATGCC+AGG - chr1.2:63794544-63794563 MS.gene07424:CDS 60.0%
!! GTGGTGTTGGCTTGGGACCT+CGG - chr1.2:63792031-63792050 MS.gene07424:intron 60.0%
!! TCGGGTCAGGGGCATCAAGA+TGG + chr1.2:63793988-63794007 None:intergenic 60.0%
AGATGGAAGGCCACCGCCAC+AGG - chr1.2:63794519-63794538 MS.gene07424:CDS 65.0%
CGGTGGGTCATGCACTGGGA+AGG - chr1.2:63794282-63794301 MS.gene07424:CDS 65.0%
GAGGGTGGAGCCTGGAACAC+CGG - chr1.2:63794262-63794281 MS.gene07424:CDS 65.0%
GCATGACCCACCGGTGTTCC+AGG + chr1.2:63794275-63794294 None:intergenic 65.0%
GTGGAGCCTGGAACACCGGT+GGG - chr1.2:63794266-63794285 MS.gene07424:CDS 65.0%
GTGGCGGTGGCCTTCCATCT+GGG + chr1.2:63794519-63794538 None:intergenic 65.0%
TCAGGGCTCCTGTAAGGCCC+AGG + chr1.2:63794472-63794491 None:intergenic 65.0%
TGTGGCGGTGGCCTTCCATC+TGG + chr1.2:63794520-63794539 None:intergenic 65.0%
GGTGGAGCCTGGAACACCGG+TGG - chr1.2:63794265-63794284 MS.gene07424:CDS 70.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 63789802 63794639 63789802 ID=MS.gene07424
chr1.2 mRNA 63789802 63794639 63789802 ID=MS.gene07424.t1;Parent=MS.gene07424
chr1.2 exon 63793976 63794639 63793976 ID=MS.gene07424.t1.exon1;Parent=MS.gene07424.t1
chr1.2 CDS 63793976 63794639 63793976 ID=cds.MS.gene07424.t1;Parent=MS.gene07424.t1
chr1.2 exon 63791622 63791896 63791622 ID=MS.gene07424.t1.exon2;Parent=MS.gene07424.t1
chr1.2 CDS 63791622 63791896 63791622 ID=cds.MS.gene07424.t1;Parent=MS.gene07424.t1
chr1.2 exon 63789802 63790605 63789802 ID=MS.gene07424.t1.exon3;Parent=MS.gene07424.t1
chr1.2 CDS 63789802 63790605 63789802 ID=cds.MS.gene07424.t1;Parent=MS.gene07424.t1
Gene Sequence

>MS.gene07424

ATGTCTTACCATCCAAGACCACTTTCTTGGATTGTCGTTTTAGTAGGAGCACTTGCAATTTTCTTAATCTATGCTTCATTTGTTCTTGTTTCATCGCCGATTGGTGCCACGTTTCATGGATATTTTTACGGTATAGGTAGTTCTGAGAAGTTAGATGTATCTGGATCTCCTATAAATGTTGCTTCTATTGGTAATAAACCGTCTTTAGATTCACAATCTTCCACTGGTACTAGTGATAGCAATATAGAAAAAACCGATACCACTTCAAACTCGGAAGTAGACAATAGTAAGTCTAGTTCTGTGGAACTTCCAACGAGCGAGGATGTCAATAAAACTTCTGATGTGAAACTTCCACCAAAACCCACGACTTCGTTTGGCAATAGTGTAGATACGGCCAATACTAGTTTGCCTGCTCAAGCAAATTCACAAGTTGATTCAACTTCAAGTGCAACTGTTTCGGTTGAAGCAGGTGCCGGTTCTTCCAATTTGACGGGTGGTATTAGAACTGAAGAACCCCCTCCTACGGTTTCAAATGACCAGTCCGGTGGTGTGATTATAGCACCAAAGGAAACCTCCACGACTTCTGATAATTCCACATTAACAGCTGTTCCAGAATCAGTAAAGAAGCCTGACAACGCATCCAATGCCGGTTCAGTTAATTCAGGTTACTGTTGCAATCTTTCACCTACACTAGCTTGTTTTTTAAATGCTTCATGGTATAATATTTACCATTCTTGTTTTGTACTACTATAATATACAATAACATAAAATTGTCTGTTTTTCTTTACTTCACTCTCTTTTGGAAGCACATTGTGTTTAGTAAAATAGTCTCATTTTATTAATCTTAACTCAATACTTGTTACATCCTAGAGAAACTGAAATGAACAGAAGATAGAAAAAAATCAAGAGAATAGAAGTGTATTATTGCAAACTGAACTGGAATTGTAGAAATGTAATTCAACCCAAGAGTTTTCCCTTTGTAAAGGATATCTCTTTTCACTTTCCATGTACAACTATCAAATTGACATCTCCTCCTTTCCATTCCCATATTCTCTTTTTAATTTTTATAACTCATTCTAACTATTACTACTAAATTTACAATTTTATTCTACCCCAACATTACTATTTTATCTAACTTCAAACTGTGATTAGGATTTAACCACCTAACAAAAAAACACTCATAGCTATTTGTCTAGTTAATGTATTACATGAAAAGTCTGAGGGAGGGATATATTTCGTCTTTAAACATGCATACATATGTCCTGCTTCATGCATTTGAAGGATTCAGGTTGAGAGAGAGATTTTTCTTACAGTAGACACTAATATAGCAAAGAGATGATGTTGTCTATATTTTTCTCCGAGGGCTTTAATGAGATTTCCTTGCATCCACCACTTTAGCTTGTTTTTAGTACGATTGTCGAGTAACCTCTATTTTATTTTGGTCTTTGTTTCAGTTATCAATTGGGCTAATTAAGTGGTTGTTAGACTTAAGCCCATGAGGATAGCCCAACTCAAAAGACCAGTCCATTAGGTTGGAGAGCCTCATGGCTTAGTACCACACTGAGCACTTTTATCTAGTTTATGTGGGACTCCTAACATTGCCATCACCCCCTTTAAGAGCCGACTTCTACGTCAGTTTCACTCTATCGGCACTGACCCAACGGTAGCCCTTTCCTCTTTGGCGGCTTCACTCACCAATCGGTATTTAGTTGAGTACCTTAATCGGTAGCCCTTTCTGTGACCCAACTCTCAATGACAGCATCATTTATTAGGACTTATGTCCATGAGGAGAGTCCAACCCAAAAGACTAGTTTATTAAGTGGGAGAGCATCATAGCTTAAGTACCGCACTCGGCCCTTTTATCTACTGGAATTTTGGCGTGTTTGTTTGGTAGGGTATCTGTTTGTTAACTCTCTAAATCATCAGAATTTTTTTTTTCTTTTTTCTTCCGAACCATTACTTCTGTCCTGGCCTTCTGGGATAGTTTGCACTCGAGTCTGGTGACTCTCTAATCACCATGACAGGAGTGGTATTGTCATGATGATGTTTGGTTGTTCACTGTTCCTTGTTTCTTGTTGCTAAGCACATAATTGAGTTGTTAATTAGCAACTGAATCAACGGATTTAATTTTGCTTTTGTACTTCTGGGCAAGGATCTGAATTTCATTGTCAACAACACTAAATCGCTTATAAAGAATTGTAACAGAAAAAACCCACTTGAGTTGGTCTGGTGGTGTTGGCTTGGGACCTCGGAGTGTGCTCCTCTCAAGGTCTCAGGTTTGATTCTCTCCGGTGCCAATTTCGGTGGGCTAGTTTGGCTTATTCTAAAAAAAAAAAAATTGTAACAGAAATATTTCGTTGTAGTATATACAAAATGAATAAATTGAAACATGAAACCAATTATTCAAATTTTTAAAAAGTTGAATTCACAGTAGTTTCAGGTGTATGGATTACTGACTGCAAATATGATGTATAATTCAAAGTTTTGGTTGGCAGATATGACACAGCCTCACATATACATGCACTCACACGAGCCCGCACACATACATACTCACACTCACCGACACACTCACACTTGTGTTGCTATATATGTTTGGGAAATTCTCAAACATATGTAAATTATTAGTAGCTGTATCTTGTTACTAAAAATTTCTTATTGTAAACAGGTGACGGTTTTATAATAATATTGTTTGAAATTACTCTGTGTGAGGCTTTTAATTGGTATTGTCCATTCTGTTGTGTAGGCTGTGATCTGTACCATGGGAATTGGGTACATGATCCATTGGGACCACTTTACACAAACAATACATGTCCTGTATTGACACAGATGCAGAATTGCCAGGGTAATGGGAGGCCTGACAAAGATTATGAGAATTGGCGATGGAAGCCCTTTCAGTGTGACATCCCACGATTTGATCCTAGAAAATTTTTGGAGCTGATGAGAGGGAAGACCTTGGCTTTCATTGGAGATTCAGTAGCTCGAAACCAAATGGAATCAATGTTGTGTATTCTGTGGCAGGTTATTTCTTTATTTTATTCCTTATTGATCTGTTTTGCATGGAAAATAAAATGATTTAGAGATTATGGAAATATTATCAGTTTTACTGTTGTCATTGTTGCTGCATATTGTTTGTGATTATGAACTCTCTAACAATAGGGCTGGAAATATTTGAACTTTGAATTTGACTAGTTAAGATGTACGAGATTGTTTGTAAGTTTTATCCGAGACACGCATAATCGAATCATTTACAGTTTGCTTTGTTTGGTAGTAAATTAGTCCAATAAAGTAAATTCACATCTCAACAGAAAGACTTCAACATGATAAAGCTTTCAACCTGTTTGTATTTTATATTTGTTTGGTTTGGCTTCATCTAAATAAATAGAGTAACTCTTATTATTATTGTATTATGGATGCTTAATTTATTGACATTTATCTGAGAACCATAAATGTTAATAAAAAGAAAAATTGTTTTGCTTTGAAACAACTTCTGCAACATGTGGATTTATTATTATTATTATTAGGTAAAAGAGGATGGGGAGGTGATTTATTAGGTAAACCAGGAAGTAAATGAGAATGAAATCAGGAAACAAATTGATATGCATCCAGTACAACAATTTCTGCATTTATAATCTAGTTTCTCATATAAACATTTCTTTATTAGGTAAAAGAGGAACGTAATCAAATTGATTTGGCGAGAAACTAAGTATATTTTTCTCAACATTTCTTTTCTTAGTTTGGCTTTGAAATTTTATGCCTTTCCCAGCCAAAGTATATTCCAATAAAAAGAAAAATGCATGTTTTGCCTCTTGGCACTGCATCAAAAATTGTTTTATGTGGCTTTAATGCTGCATATGCACCATACCCGGTTCATAATGAAATGGTTTTTAGCCGTTCAACAGCATGCATTTGATTGCAAGTATTCATTTACACATACATAGGGTTTTCCATATCCATGCTTGTGTGTGCATGGTGCATGTGATTAAGCATCCATTTTATCATAGCTAGAAGCTTAACTGAAAATATGGTATTTTCAGGTAGAGGTACCAAAGAATCGGGGAAATCGTAATATGCAAAGATATTATTTTAGGTCCGCATCTGTAATGATAGTCCGGATATGGTCCTCATGGCTTGTCAAAGTGACGTCTGAACCATTTGATTATGCTCCAGCTGGTGTGGATAAGCTCCATCTTGATGCCCCTGACCCGAAGTTAATGGAACATATCCCAAATTTTGACGTGGTTGTCCTTTCTTCCGGTCATTGGTTTGCTAAGCAGTCTGTGTATATCTTGAATAACGAGATAGTGGGAGGACAGTTATGGTGGCCAGACAAGTCCAAGCAGATGAAGGTCAACAACATTCAAGCATATGCTATATCTGTAGAAACAATTCTTACTGCTCTTGCTACACATCCAACTTACAAAGGTCTCGCAATTGTTCGGTCCTATTCACCAGATCATTATGAGGGTGGAGCCTGGAACACCGGTGGGTCATGCACTGGGAAGGTTAAGCCTGTTGCACTTGGTGAACTGGTAGAAAACGGGCACACAAATACGATGCATGAGCAACAGGTTACAGGTTTTAACCGCGCCATGGAAAAGGCTACAAATAAATCGAAGTTGACGTTAATGGACATTACTCAAGCGTTTCAATACCGACATGATGGTCATCCTGGGCCTTACAGGAGCCCTGACCCAAATAAGATCACTAAACGTGGCCCAGATGGAAGGCCACCGCCACAGGATTGCTTGCACTGGTGCATGCCAGGTCCTGTCGATACCTGGAATGAACTTGTCTTGGAAATCATCAAGAGAGAATATGAAGGTGGAAGTGCATCATGA
Protein sequence

>MS.gene07424.t1

MSYHPRPLSWIVVLVGALAIFLIYASFVLVSSPIGATFHGYFYGIGSSEKLDVSGSPINVASIGNKPSLDSQSSTGTSDSNIEKTDTTSNSEVDNSKSSSVELPTSEDVNKTSDVKLPPKPTTSFGNSVDTANTSLPAQANSQVDSTSSATVSVEAGAGSSNLTGGIRTEEPPPTVSNDQSGGVIIAPKETSTTSDNSTLTAVPESVKKPDNASNAGSVNSGCDLYHGNWVHDPLGPLYTNNTCPVLTQMQNCQGNGRPDKDYENWRWKPFQCDIPRFDPRKFLELMRGKTLAFIGDSVARNQMESMLCILWQVEVPKNRGNRNMQRYYFRSASVMIVRIWSSWLVKVTSEPFDYAPAGVDKLHLDAPDPKLMEHIPNFDVVVLSSGHWFAKQSVYILNNEIVGGQLWWPDKSKQMKVNNIQAYAISVETILTALATHPTYKGLAIVRSYSPDHYEGGAWNTGGSCTGKVKPVALGELVENGHTNTMHEQQVTGFNRAMEKATNKSKLTLMDITQAFQYRHDGHPGPYRSPDPNKITKRGPDGRPPPQDCLHWCMPGPVDTWNELVLEIIKREYEGGSAS