AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene030021

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene030021.t1 MTR_6g061710 94.798 519 27 0 3 521 6 524 0.0 1035
MS.gene030021.t1 MTR_1g076690 60.862 580 157 8 11 521 2 580 0.0 701
MS.gene030021.t1 MTR_6g016880 35.279 377 221 8 144 514 63 422 4.12e-77 249
MS.gene030021.t1 MTR_7g019120 34.877 367 221 7 154 514 69 423 1.83e-76 248
MS.gene030021.t1 MTR_6g016875 34.204 383 220 10 147 512 42 409 1.05e-73 240
MS.gene030021.t1 MTR_8g099300 33.898 354 220 8 164 511 74 419 5.30e-73 238
MS.gene030021.t1 MTR_6g007777 33.254 418 256 9 105 514 58 460 8.16e-73 239
MS.gene030021.t1 MTR_8g027900 35.484 372 227 8 145 511 192 555 1.14e-71 238
MS.gene030021.t1 MTR_5g035090 35.342 365 203 10 164 513 83 429 6.38e-69 228
MS.gene030021.t1 MTR_3g109840 33.508 382 228 10 142 513 52 417 3.59e-65 218
MS.gene030021.t1 MTR_7g033230 35.150 367 210 11 160 513 260 611 3.76e-65 223
MS.gene030021.t1 MTR_5g035150 33.512 373 205 12 162 513 83 433 5.51e-65 218
MS.gene030021.t1 MTR_7g033230 35.150 367 210 11 160 513 330 681 1.38e-64 222
MS.gene030021.t1 MTR_5g035080 32.487 394 242 10 131 513 42 422 1.83e-64 216
MS.gene030021.t1 MTR_2g016060 34.060 367 204 12 165 513 56 402 1.96e-64 215
MS.gene030021.t1 MTR_8g104970 34.734 357 219 10 162 512 118 466 4.78e-63 213
MS.gene030021.t1 MTR_5g035070 34.903 361 212 10 164 513 87 435 5.26e-59 202
MS.gene030021.t1 MTR_7g093450 29.084 502 290 19 56 516 117 593 6.16e-54 192
MS.gene030021.t1 MTR_7g109550 30.087 462 259 18 69 508 45 464 7.20e-54 189
MS.gene030021.t1 MTR_4g126950 29.471 397 233 9 136 511 76 446 5.54e-53 186
MS.gene030021.t1 MTR_7g094750 30.601 366 218 8 164 514 91 435 3.80e-52 184
MS.gene030021.t1 MTR_0136s0010 30.688 378 222 12 145 508 155 506 1.03e-51 184
MS.gene030021.t1 MTR_5g033800 29.494 356 220 9 164 508 145 480 4.07e-51 182
MS.gene030021.t1 MTR_5g059400 29.708 377 224 10 156 513 167 521 2.80e-50 181
MS.gene030021.t1 MTR_1g116130 29.708 377 224 10 156 513 167 521 2.80e-50 181
MS.gene030021.t1 MTR_4g125060 30.543 442 237 18 98 511 111 510 1.26e-48 176
MS.gene030021.t1 MTR_4g125060 30.543 442 237 18 98 511 72 471 1.96e-48 174
MS.gene030021.t1 MTR_8g069790 29.477 363 221 10 159 508 173 513 2.45e-48 175
MS.gene030021.t1 MTR_4g125060 30.543 442 237 18 98 511 140 539 3.92e-48 175
MS.gene030021.t1 MTR_8g463790 29.024 379 218 12 160 517 67 415 3.98e-48 172
MS.gene030021.t1 MTR_2g022560 30.685 365 214 9 163 511 96 437 1.01e-46 169
MS.gene030021.t1 MTR_1g112210 30.790 367 201 13 149 507 44 365 4.88e-46 165
MS.gene030021.t1 MTR_1g112210 30.000 370 213 12 149 507 44 378 3.64e-45 163
MS.gene030021.t1 MTR_8g093870 30.749 387 202 16 154 511 123 472 6.19e-45 165
MS.gene030021.t1 MTR_4g121560 28.804 368 230 11 156 511 106 453 1.41e-44 164
MS.gene030021.t1 MTR_3g090120 29.474 380 203 12 163 518 128 466 9.31e-44 161
MS.gene030021.t1 MTR_5g071350 28.191 376 231 12 148 508 45 396 9.18e-43 157
MS.gene030021.t1 MTR_1g058380 29.008 393 219 12 155 521 46 404 6.30e-42 155
MS.gene030021.t1 MTR_1g050448 30.978 368 215 13 151 511 40 375 1.41e-41 153
MS.gene030021.t1 MTR_4g014440 27.419 372 238 13 155 511 53 407 1.23e-39 149
MS.gene030021.t1 MTR_3g049330 28.895 353 209 11 163 508 30 347 1.96e-39 147
MS.gene030021.t1 MTR_3g464570 27.926 376 222 13 152 511 34 376 4.83e-39 146
MS.gene030021.t1 MTR_8g093530 27.151 372 226 10 157 516 83 421 9.04e-39 147
MS.gene030021.t1 MTR_3g070900 28.177 362 232 10 162 511 104 449 1.59e-38 147
MS.gene030021.t1 MTR_3g071650 28.371 356 227 14 164 508 89 427 2.54e-38 145
MS.gene030021.t1 MTR_4g016940 26.966 356 238 10 164 511 86 427 3.37e-38 145
MS.gene030021.t1 MTR_2g015720 29.700 367 197 12 160 511 38 358 3.19e-37 141
MS.gene030021.t1 MTR_5g083260 27.809 356 233 13 162 508 81 421 3.33e-37 142
MS.gene030021.t1 MTR_7g070060 27.577 359 236 12 164 511 64 409 7.01e-37 141
MS.gene030021.t1 MTR_3g021060 28.495 372 212 12 152 511 34 363 1.03e-36 139
MS.gene030021.t1 MTR_4g079700 27.869 366 209 11 158 511 41 363 1.06e-36 139
MS.gene030021.t1 MTR_2g091175 29.830 352 200 12 164 507 50 362 1.53e-36 139
MS.gene030021.t1 MTR_4g014430 27.838 370 218 14 162 511 106 446 1.77e-36 140
MS.gene030021.t1 MTR_3g035830 27.248 367 203 12 162 511 29 348 2.98e-36 138
MS.gene030021.t1 MTR_1g111010 28.610 367 186 13 164 511 32 341 1.30e-35 136
MS.gene030021.t1 MTR_4g088030 28.691 359 196 12 164 507 33 346 1.94e-35 135
MS.gene030021.t1 MTR_7g068920 25.735 408 265 13 122 511 34 421 1.07e-34 135
MS.gene030021.t1 MTR_2g073500 29.032 372 195 14 159 511 24 345 4.46e-34 132
MS.gene030021.t1 MTR_3g021090 26.966 356 210 9 162 507 29 344 4.64e-34 133
MS.gene030021.t1 MTR_7g019140 51.456 103 50 0 154 256 69 171 5.14e-34 127
MS.gene030021.t1 MTR_2g073510 27.147 361 210 14 164 511 33 353 1.03e-33 131
MS.gene030021.t1 MTR_5g034810 27.019 359 218 12 157 508 28 349 1.28e-33 131
MS.gene030021.t1 MTR_4g092830 26.471 374 220 14 164 511 48 392 3.62e-33 131
MS.gene030021.t1 MTR_4g087730 28.612 353 210 14 161 507 42 358 3.85e-33 130
MS.gene030021.t1 MTR_7g094750 31.301 246 149 5 164 397 91 328 1.60e-32 127
MS.gene030021.t1 MTR_5g082880 26.005 373 229 9 162 511 163 511 1.95e-32 130
MS.gene030021.t1 MTR_5g035120 51.648 91 44 0 162 252 73 163 2.17e-30 117
MS.gene030021.t1 MTR_5g033800 34.254 181 106 4 164 334 145 322 9.31e-30 120
MS.gene030021.t1 MTR_5g035140 30.709 254 159 9 268 514 25 268 2.18e-28 114
MS.gene030021.t1 MTR_6g016240 24.129 373 241 11 157 509 64 414 3.75e-28 117
MS.gene030021.t1 MTR_7g070060 37.037 135 79 2 164 292 64 198 4.00e-25 106
MS.gene030021.t1 MTR_3g464570 25.000 300 179 12 228 511 3 272 6.85e-17 81.3
MS.gene030021.t1 MTR_7g070060 23.856 306 210 11 216 511 15 307 2.07e-15 77.4
MS.gene030021.t1 MTR_0929s0010 48.276 58 30 0 154 211 69 126 4.08e-14 69.7
MS.gene030021.t1 MTR_7g019130 28.125 128 85 3 278 402 1 124 6.65e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene030021.t1 AT5G51640 58.065 527 180 7 5 521 3 498 0.0 613
MS.gene030021.t1 AT4G25360 56.673 517 201 6 14 514 18 527 0.0 604
MS.gene030021.t1 AT4G25360 56.673 517 201 6 14 514 18 527 0.0 604
MS.gene030021.t1 AT1G01430 36.430 409 241 12 114 511 47 447 3.64e-80 258
MS.gene030021.t1 AT4G23790 35.754 358 217 7 161 511 76 427 3.34e-78 252
MS.gene030021.t1 AT1G70230 38.736 364 180 11 164 513 79 413 6.23e-76 246
MS.gene030021.t1 AT5G15900 35.376 359 211 9 164 514 67 412 8.66e-76 245
MS.gene030021.t1 AT5G15900 35.376 359 211 9 164 514 86 431 1.06e-75 246
MS.gene030021.t1 AT4G11090 36.490 359 211 11 161 511 76 425 2.80e-74 242
MS.gene030021.t1 AT5G15890 32.494 437 251 12 102 514 109 525 7.29e-73 241
MS.gene030021.t1 AT4G01080 35.676 370 223 7 151 516 78 436 1.14e-71 235
MS.gene030021.t1 AT3G02440 32.958 355 220 7 164 512 127 469 1.61e-70 233
MS.gene030021.t1 AT3G02440 32.958 355 220 7 164 512 135 477 1.87e-70 233
MS.gene030021.t1 AT3G28150 33.989 356 216 7 164 513 70 412 9.64e-68 224
MS.gene030021.t1 AT5G20590 33.333 366 199 11 161 508 138 476 4.05e-57 198
MS.gene030021.t1 AT3G62390 31.011 445 252 15 90 508 53 468 8.20e-54 189
MS.gene030021.t1 AT5G49340 28.680 394 239 10 136 511 72 441 2.79e-52 184
MS.gene030021.t1 AT1G60790 29.070 430 252 14 99 508 133 529 2.32e-51 184
MS.gene030021.t1 AT5G06700 27.542 472 283 14 68 511 155 595 1.09e-49 180
MS.gene030021.t1 AT3G12060 26.977 430 274 9 90 508 132 532 1.41e-49 179
MS.gene030021.t1 AT3G06080 30.214 374 212 11 163 514 102 448 4.22e-49 176
MS.gene030021.t1 AT5G19160 28.836 378 220 10 163 517 98 449 2.77e-48 174
MS.gene030021.t1 AT1G73140 30.189 371 216 10 162 515 65 409 1.00e-47 171
MS.gene030021.t1 AT5G20680 29.457 387 225 11 145 511 99 457 9.20e-45 164
MS.gene030021.t1 AT5G06230 29.243 383 211 11 154 508 11 361 2.13e-44 161
MS.gene030021.t1 AT5G20680 29.973 377 216 11 155 511 185 533 2.74e-44 164
MS.gene030021.t1 AT5G20680 29.973 377 216 11 155 511 203 551 3.27e-44 164
MS.gene030021.t1 AT5G20680 29.973 377 216 11 155 511 203 551 3.27e-44 164
MS.gene030021.t1 AT5G20680 29.973 377 216 11 155 511 203 551 3.27e-44 164
MS.gene030021.t1 AT5G20680 29.973 377 216 11 155 511 203 551 3.27e-44 164
MS.gene030021.t1 AT5G06230 29.243 383 211 11 154 508 52 402 3.76e-44 161
MS.gene030021.t1 AT5G64020 31.300 377 205 15 164 511 57 408 4.64e-43 158
MS.gene030021.t1 AT5G64470 27.945 365 221 11 164 511 55 394 1.66e-42 156
MS.gene030021.t1 AT2G30900 30.645 372 210 13 151 508 25 362 5.94e-42 154
MS.gene030021.t1 AT2G31110 30.645 372 198 12 153 508 32 359 6.60e-42 154
MS.gene030021.t1 AT2G40160 28.412 359 232 9 161 507 74 419 1.34e-41 154
MS.gene030021.t1 AT5G64470 28.226 372 217 13 164 511 55 400 1.66e-41 154
MS.gene030021.t1 AT2G40160 28.338 367 237 10 161 514 74 427 1.75e-41 154
MS.gene030021.t1 AT2G30010 29.076 368 214 11 164 511 56 396 5.95e-40 149
MS.gene030021.t1 AT2G30010 29.076 368 214 11 164 511 99 439 1.07e-39 149
MS.gene030021.t1 AT3G14850 29.412 357 211 11 162 511 32 354 3.06e-39 146
MS.gene030021.t1 AT5G01360 26.554 354 237 10 164 508 36 375 7.49e-39 146
MS.gene030021.t1 AT1G29050 28.493 365 199 11 163 511 60 378 8.81e-39 145
MS.gene030021.t1 AT2G14530 27.919 394 243 13 137 511 35 406 1.12e-38 146
MS.gene030021.t1 AT5G01360 26.629 353 238 10 164 508 92 431 1.33e-38 146
MS.gene030021.t1 AT2G34070 26.849 365 206 10 163 511 64 383 4.40e-38 144
MS.gene030021.t1 AT3G11570 28.857 350 197 12 180 508 98 416 5.87e-38 144
MS.gene030021.t1 AT3G54260 29.945 364 199 14 164 511 51 374 7.97e-38 143
MS.gene030021.t1 AT2G40150 27.882 373 228 11 164 514 71 424 3.38e-37 142
MS.gene030021.t1 AT3G11030 26.685 356 238 11 162 508 104 445 4.42e-37 142
MS.gene030021.t1 AT1G48880 27.614 373 219 12 157 514 106 442 1.31e-36 141
MS.gene030021.t1 AT3G55990 26.869 428 270 12 105 513 83 486 5.88e-36 140
MS.gene030021.t1 AT5G01620 28.455 369 218 18 162 511 108 449 5.94e-36 139
MS.gene030021.t1 AT5G01620 28.455 369 218 18 162 511 108 449 5.94e-36 139
MS.gene030021.t1 AT5G01620 28.455 369 218 18 162 511 116 457 7.33e-36 139
MS.gene030021.t1 AT2G42570 28.652 356 208 12 164 511 47 364 8.78e-36 137
MS.gene030021.t1 AT5G58600 27.147 361 224 10 164 511 66 400 1.50e-35 137
MS.gene030021.t1 AT2G40320 26.121 379 248 15 141 508 62 419 3.04e-35 137
MS.gene030021.t1 AT2G37720 27.540 374 211 14 161 508 140 479 8.24e-35 137
MS.gene030021.t1 AT2G38320 28.457 376 215 19 162 511 57 404 1.78e-34 134
MS.gene030021.t1 AT3G62390 42.703 185 88 6 90 259 53 234 2.39e-34 134
MS.gene030021.t1 AT1G78710 28.926 363 199 15 164 511 38 356 5.97e-34 132
MS.gene030021.t1 AT5G20590 32.016 253 144 7 161 397 138 378 6.35e-32 127
MS.gene030021.t1 AT5G19160 28.689 244 158 4 163 396 98 335 2.00e-29 119
MS.gene030021.t1 AT3G06080 29.365 252 148 7 163 397 102 340 2.16e-29 119
MS.gene030021.t1 AT2G31110 35.638 188 108 5 153 335 32 211 1.04e-28 115
MS.gene030021.t1 AT2G40160 33.155 187 120 3 161 342 74 260 1.13e-28 116
MS.gene030021.t1 AT2G30900 35.602 191 105 6 151 331 25 207 3.35e-28 114
MS.gene030021.t1 AT2G38320 28.280 343 193 18 194 511 7 321 5.57e-27 111
MS.gene030021.t1 AT5G64470 27.586 261 161 8 164 407 55 304 5.60e-27 111
MS.gene030021.t1 AT5G64470 27.586 261 161 8 164 407 55 304 6.40e-27 111
MS.gene030021.t1 AT5G06230 28.625 269 156 8 154 399 52 307 1.35e-23 101
MS.gene030021.t1 AT1G78710 47.778 90 44 2 164 252 31 118 3.28e-22 97.4
MS.gene030021.t1 AT5G58600 28.638 213 140 5 164 371 66 271 4.24e-22 97.1
MS.gene030021.t1 AT2G34070 23.549 293 163 10 235 511 2 249 3.25e-14 73.2
MS.gene030021.t1 AT3G14850 26.335 281 166 11 235 508 2 248 3.73e-13 70.1

Find 124 sgRNAs with CRISPR-Local

Find 163 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTTTCATAATTGAGGAAT+TGG 0.286895 6.2:-64796064 None:intergenic
TTAGGATCAGTGCTCCTATA+TGG 0.296985 6.2:-64797324 None:intergenic
ATGTATGAGCAACAGGTTAC+AGG 0.306715 6.2:+64797204 MS.gene030021:CDS
CCACTCACATCCTTAGTTAC+TGG 0.316877 6.2:-64795991 None:intergenic
CCTATTGGTTCAACTGTTCA+TGG 0.321255 6.2:+64795721 MS.gene030021:CDS
TAACACACCACTGGAAACTA+TGG 0.325407 6.2:-64795881 None:intergenic
GTAGAGAGTTCACAAACTTC+TGG 0.339283 6.2:+64795757 MS.gene030021:CDS
GTGATCTGTACCATGGAAAT+TGG 0.343434 6.2:+64796271 MS.gene030021:CDS
CAAATCCGAAACCACTTTCT+CGG 0.344080 6.2:+64795632 MS.gene030021:CDS
CGCAGAATTGTCAGGGTAAT+GGG 0.351851 6.2:+64796352 MS.gene030021:CDS
TTGTTCTTTCATCTGGTCAT+TGG 0.356280 6.2:+64796890 MS.gene030021:CDS
ACTGTTCATGGTTATTTCAA+TGG 0.363276 6.2:+64795733 MS.gene030021:CDS
CGCTTCGATGTATGAGCAAC+AGG 0.367684 6.2:+64797197 MS.gene030021:CDS
CAGTTCTCATAATCCTTATC+AGG 0.368015 6.2:-64796378 None:intergenic
GTTACGCATCCGAATTATAC+TGG 0.373663 6.2:+64797051 MS.gene030021:CDS
CCATGAACAGTTGAACCAAT+AGG 0.375978 6.2:-64795721 None:intergenic
TTTCGGATTTGAAGAACCTT+TGG 0.380304 6.2:-64795620 None:intergenic
GTTAAATGAAAGGCATGAAT+TGG 0.394314 6.2:+64795584 None:intergenic
AACATTACCTTTCATAATTG+AGG 0.395469 6.2:-64796070 None:intergenic
TTGGTACTAGCCATTGGAAT+AGG 0.395908 6.2:-64796045 None:intergenic
ATAATCCGAGAAAGTGGTTT+CGG 0.398592 6.2:-64795637 None:intergenic
CTGTAACGATTGTTCGGATA+TGG 0.400519 6.2:+64796746 MS.gene030021:CDS
GATGTGGTTGTTCTTTCATC+TGG 0.403835 6.2:+64796883 MS.gene030021:CDS
CATGATGTGTATTCTTTGGC+AGG 0.406120 6.2:+64796521 MS.gene030021:CDS
ATTGTAAGTCCAGTATAATT+CGG 0.411987 6.2:-64797060 None:intergenic
TTCTGCGTCTGTGTCAATAC+AGG 0.412465 6.2:-64796336 None:intergenic
TGGCTTAGAAACTTCTGATT+CGG 0.414109 6.2:+64796011 MS.gene030021:CDS
AATTCCATGAACATCTCATC+AGG 0.417225 6.2:-64796847 None:intergenic
CATGAACAGTTGAACCAATA+GGG 0.420888 6.2:-64795720 None:intergenic
TTCGGATTTGAAGAACCTTT+GGG 0.424140 6.2:-64795619 None:intergenic
CTATTCACCCGATCATTATG+AGG 0.425666 6.2:+64797092 MS.gene030021:CDS
GACACAGACGCAGAATTGTC+AGG 0.428093 6.2:+64796344 MS.gene030021:CDS
ACGCAGAATTGTCAGGGTAA+TGG 0.429115 6.2:+64796351 MS.gene030021:CDS
CTCATAATGATCGGGTGAAT+AGG 0.435508 6.2:-64797091 None:intergenic
ATCCCCTGATGAGATGTTCA+TGG 0.437117 6.2:+64796843 MS.gene030021:CDS
TGCTTGCACTGGTGCATGCC+GGG 0.439344 6.2:+64797393 MS.gene030021:CDS
TGCCGGGACCTGTGGATACT+TGG 0.440314 6.2:+64797409 MS.gene030021:CDS
ATCAACAGCATCGAAGCATT+TGG 0.448769 6.2:+64796997 MS.gene030021:CDS
AGTCCATGATGTGTATTCTT+TGG 0.459251 6.2:+64796517 MS.gene030021:CDS
AACACCGGTGGGTCATGCAC+TGG 0.459666 6.2:+64797126 MS.gene030021:CDS
CGCGGGATGTCACACTGAAA+AGG 0.469324 6.2:-64796411 None:intergenic
CTGATAAGGATTATGAGAAC+TGG 0.478521 6.2:+64796379 MS.gene030021:CDS
CTCCATCTGGTTTCGAGCAA+CGG 0.480655 6.2:-64796496 None:intergenic
GGGTAATGGGAGGCCTGATA+AGG 0.480971 6.2:+64796365 MS.gene030021:CDS
CAACATCTGTAACGATTGTT+CGG 0.481747 6.2:+64796740 MS.gene030021:CDS
CAGGACTTGTTTGTGTATAA+CGG 0.485025 6.2:-64796312 None:intergenic
TTACTGAAGCGTTTCAATAC+CGG 0.486936 6.2:+64797283 MS.gene030021:CDS
GAACAACCACATCAAATGTT+GGG 0.487105 6.2:-64796873 None:intergenic
GAAAATCGTTCCAGTAACTA+AGG 0.487845 6.2:+64795981 MS.gene030021:CDS
TGCAAGCAATCCTGTGGTGG+TGG 0.489823 6.2:-64797378 None:intergenic
ATTACGAAACGAGGCCGAGA+TGG 0.490809 6.2:+64797351 MS.gene030021:CDS
CCATTCGACTTTGCTCCAGC+TGG 0.493371 6.2:+64796799 MS.gene030021:CDS
AGATGGAAGGCCACCACCAC+AGG 0.494437 6.2:+64797368 MS.gene030021:CDS
TACACATCATGGACTCCATC+TGG 0.495858 6.2:-64796509 None:intergenic
ACCCGATCATTATGAGGGTG+GGG 0.502680 6.2:+64797098 MS.gene030021:CDS
CTGGTGCATGCCGGGACCTG+TGG 0.510659 6.2:+64797401 MS.gene030021:CDS
AGAACAACCACATCAAATGT+TGG 0.510831 6.2:-64796874 None:intergenic
CGACTTTGCTCCAGCTGGTG+TGG 0.512087 6.2:+64796804 MS.gene030021:CDS
TTCGCATGCCGAGACTTGTC+CGG 0.512674 6.2:-64796973 None:intergenic
GAAAATATAATCCGAGAAAG+TGG 0.515657 6.2:-64795643 None:intergenic
AAATGAAAGGCATGAATTGG+AGG 0.517381 6.2:+64795587 None:intergenic
GAGGAATTGGTACTAGCCAT+TGG 0.518967 6.2:-64796051 None:intergenic
TGTGGTGGCCGGACAAGTCT+CGG 0.519743 6.2:+64796965 MS.gene030021:CDS
CACCCGATCATTATGAGGGT+GGG 0.521466 6.2:+64797097 MS.gene030021:CDS
TACCGGCATGATGGTCATCC+TGG 0.522022 6.2:+64797300 MS.gene030021:CDS
AATTGGATATATGATTCATC+GGG 0.526023 6.2:+64796288 MS.gene030021:CDS
ATTTCTTCGGATCAAATCGC+GGG 0.527273 6.2:-64796428 None:intergenic
TTGCTTGCACTGGTGCATGC+CGG 0.530780 6.2:+64797392 MS.gene030021:CDS
AAATTGGATATATGATTCAT+CGG 0.533210 6.2:+64796287 MS.gene030021:CDS
CGGTGAAGCAGATTCACTCA+AGG 0.533844 6.2:-64795959 None:intergenic
TATAATTCGGATGCGTAACA+AGG 0.539631 6.2:-64797047 None:intergenic
CTGCCAAAGAATACACATCA+TGG 0.540199 6.2:-64796520 None:intergenic
ACACCGGTGGGTCATGCACT+GGG 0.541733 6.2:+64797127 MS.gene030021:CDS
ATTATCACTTAACACACCAC+TGG 0.544862 6.2:-64795890 None:intergenic
ATGGTCATCCTGGTCCATAT+AGG 0.551889 6.2:+64797310 MS.gene030021:CDS
TTCCAAGTATCCACAGGTCC+CGG 0.552005 6.2:-64797411 None:intergenic
CACCACAGGATTGCTTGCAC+TGG 0.552283 6.2:+64797382 MS.gene030021:CDS
GTGGTGGTGGCCTTCCATCT+CGG 0.552482 6.2:-64797365 None:intergenic
ATCTTGAACAATGAGATAGT+TGG 0.557072 6.2:+64796934 MS.gene030021:CDS
TTCCGTTGCTCGAAACCAGA+TGG 0.559358 6.2:+64796494 MS.gene030021:CDS
ACCAATTCCTCAATTATGAA+AGG 0.561135 6.2:+64796063 MS.gene030021:CDS
GCGTTTCAATACCGGCATGA+TGG 0.568138 6.2:+64797291 MS.gene030021:CDS
AATCATATATCCAATTTCCA+TGG 0.570027 6.2:-64796281 None:intergenic
CGTCTGTGTCAATACAGGGC+AGG 0.571653 6.2:-64796331 None:intergenic
CCCGATCATTATGAGGGTGG+GGG 0.574746 6.2:+64797099 MS.gene030021:CDS
TGGAGGACAATTGTGGTGGC+CGG 0.575277 6.2:+64796954 MS.gene030021:CDS
TTTCCCAGTGCATGACCCAC+CGG 0.576397 6.2:-64797130 None:intergenic
TAGATCGAAGATGATACTGA+TGG 0.577648 6.2:+64797257 MS.gene030021:CDS
TTCAAAAGAACCTATTCCAA+TGG 0.579577 6.2:+64796035 MS.gene030021:CDS
TTGAACAATGAGATAGTTGG+AGG 0.581139 6.2:+64796937 MS.gene030021:CDS
ATCTCATTCCAAGTATCCAC+AGG 0.582412 6.2:-64797417 None:intergenic
CGAAACGAGGCCGAGATGGA+AGG 0.588106 6.2:+64797355 MS.gene030021:CDS
AATGAAAGGCATGAATTGGA+GGG 0.588865 6.2:+64795588 None:intergenic
CAACCTTCCATAGTTTCCAG+TGG 0.592094 6.2:+64795874 MS.gene030021:CDS
AGGATTATGAGAACTGGCGA+TGG 0.593464 6.2:+64796385 MS.gene030021:CDS
AAAGTTAAACCTCTTGCCCC+CGG 0.596651 6.2:+64797150 MS.gene030021:CDS
TATTCACCCGATCATTATGA+GGG 0.604395 6.2:+64797093 MS.gene030021:CDS
TTGTTCGGATATGGTCGTCA+TGG 0.605364 6.2:+64796755 MS.gene030021:CDS
GCTAATGAGAGGCAAGACAT+TGG 0.605870 6.2:+64796458 MS.gene030021:CDS
TGGAGGGTTGCATCTCCCAA+AGG 0.609098 6.2:+64795604 MS.gene030021:CDS
AATTTCTTCGGATCAAATCG+CGG 0.612642 6.2:-64796429 None:intergenic
ATTTCTCCCAACATTTGATG+TGG 0.613837 6.2:+64796867 MS.gene030021:CDS
GGTGAAGCAGATTCACTCAA+GGG 0.615265 6.2:-64795958 None:intergenic
TCACCCGATCATTATGAGGG+TGG 0.619714 6.2:+64797096 MS.gene030021:CDS
GACCAGGATGACCATCATGC+CGG 0.619809 6.2:-64797302 None:intergenic
ATTCCATGAACATCTCATCA+GGG 0.622889 6.2:-64796846 None:intergenic
TCTGCGTCTGTGTCAATACA+GGG 0.623845 6.2:-64796335 None:intergenic
TCAGTGCTCCTATATGGACC+AGG 0.625966 6.2:-64797318 None:intergenic
TTCCATGAACATCTCATCAG+GGG 0.632761 6.2:-64796845 None:intergenic
AGGGAACTCGCAACATGCAG+CGG 0.641200 6.2:+64796704 MS.gene030021:CDS
AGATAGTTGGAGGACAATTG+TGG 0.641699 6.2:+64796947 MS.gene030021:CDS
CCAGCTGGAGCAAAGTCGAA+TGG 0.642013 6.2:-64796799 None:intergenic
GTAGGTTGTGATCTGTACCA+TGG 0.645340 6.2:+64796264 MS.gene030021:intron
CAGTGCAAGCAATCCTGTGG+TGG 0.648600 6.2:-64797381 None:intergenic
CCAGTAACTAAGGATGTGAG+TGG 0.650449 6.2:+64795991 MS.gene030021:CDS
ACACAGACGCAGAATTGTCA+GGG 0.651197 6.2:+64796345 MS.gene030021:CDS
ACACCACTGGAAACTATGGA+AGG 0.665589 6.2:-64795877 None:intergenic
ATAATTCGGATGCGTAACAA+GGG 0.666704 6.2:-64797046 None:intergenic
CCTAACAAAATTACGAAACG+AGG 0.668392 6.2:+64797342 MS.gene030021:CDS
TAGTTGGAGGACAATTGTGG+TGG 0.686111 6.2:+64796950 MS.gene030021:CDS
ATCATTAAGAGAGAATACGA+AGG 0.696707 6.2:+64797450 MS.gene030021:CDS
GAAGCAGATTCACTCAAGGG+TGG 0.697647 6.2:-64795955 None:intergenic
AGAATTGTCAGGGTAATGGG+AGG 0.700086 6.2:+64796355 MS.gene030021:CDS
CACCAGTGCAAGCAATCCTG+TGG 0.706219 6.2:-64797384 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATGCAAATAAAATTAGTA+TGG - chr6.2:64796558-64796577 None:intergenic 15.0%
!! AAATTGGATATATGATTCAT+CGG + chr6.2:64796287-64796306 MS.gene030021:CDS 20.0%
!! AGTAATTTCAAGAAAATCAA+TGG - chr6.2:64796192-64796211 None:intergenic 20.0%
! AACATTACCTTTCATAATTG+AGG - chr6.2:64796073-64796092 None:intergenic 25.0%
! AATCATATATCCAATTTCCA+TGG - chr6.2:64796284-64796303 None:intergenic 25.0%
! AATTGGATATATGATTCATC+GGG + chr6.2:64796288-64796307 MS.gene030021:CDS 25.0%
! ATTAGCTCCAAAAATTTCTT+CGG - chr6.2:64796444-64796463 None:intergenic 25.0%
! ATTGTAAGTCCAGTATAATT+CGG - chr6.2:64797063-64797082 None:intergenic 25.0%
! TTAATTGCAAACGATATTTC+AGG + chr6.2:64796663-64796682 MS.gene030021:intron 25.0%
! TTGTAAGAAAGAATTTCACA+TGG + chr6.2:64796156-64796175 MS.gene030021:intron 25.0%
!! ATTTGATCCGAAGAAATTTT+TGG + chr6.2:64796434-64796453 MS.gene030021:CDS 25.0%
!! TATTCATAACTTTTGCTTCA+TGG + chr6.2:64795683-64795702 MS.gene030021:CDS 25.0%
!!! AGTTGTTTTTATTGTCAAGT+AGG + chr6.2:64796246-64796265 MS.gene030021:intron 25.0%
!!! TTTTTTCTTTCATACCCTAT+TGG + chr6.2:64795706-64795725 MS.gene030021:CDS 25.0%
ACCAATTCCTCAATTATGAA+AGG + chr6.2:64796063-64796082 MS.gene030021:CDS 30.0%
ACCTTTCATAATTGAGGAAT+TGG - chr6.2:64796067-64796086 None:intergenic 30.0%
ATCATTAAGAGAGAATACGA+AGG + chr6.2:64797450-64797469 MS.gene030021:CDS 30.0%
ATCTTGAACAATGAGATAGT+TGG + chr6.2:64796934-64796953 MS.gene030021:CDS 30.0%
GAAAATATAATCCGAGAAAG+TGG - chr6.2:64795646-64795665 None:intergenic 30.0%
GATACAAACACTAACGATTA+CGG - chr6.2:64796136-64796155 None:intergenic 30.0%
TTCAAAAGAACCTATTCCAA+TGG + chr6.2:64796035-64796054 MS.gene030021:CDS 30.0%
! ACTGTTCATGGTTATTTCAA+TGG + chr6.2:64795733-64795752 MS.gene030021:CDS 30.0%
! TATATTTTCAGTTGGAGTAG+TGG + chr6.2:64795657-64795676 MS.gene030021:CDS 30.0%
! TCTCGGATTATATTTTCAGT+TGG + chr6.2:64795649-64795668 MS.gene030021:CDS 30.0%
! TTAGTTACTGGAACGATTTT+CGG - chr6.2:64795982-64796001 None:intergenic 30.0%
!!! AAATTTTTGGAGCTAATGAG+AGG + chr6.2:64796447-64796466 MS.gene030021:CDS 30.0%
!!! TGATTTGCTTTGTTCTCTTT+TGG + chr6.2:64796097-64796116 MS.gene030021:intron 30.0%
AATTCCATGAACATCTCATC+AGG - chr6.2:64796850-64796869 None:intergenic 35.0%
AATTTCTTCGGATCAAATCG+CGG - chr6.2:64796432-64796451 None:intergenic 35.0%
AGAACAACCACATCAAATGT+TGG - chr6.2:64796877-64796896 None:intergenic 35.0%
AGTCCATGATGTGTATTCTT+TGG + chr6.2:64796517-64796536 MS.gene030021:CDS 35.0%
ATAATCCGAGAAAGTGGTTT+CGG - chr6.2:64795640-64795659 None:intergenic 35.0%
ATAATTCGGATGCGTAACAA+GGG - chr6.2:64797049-64797068 None:intergenic 35.0%
ATTATCACTTAACACACCAC+TGG - chr6.2:64795893-64795912 None:intergenic 35.0%
ATTCCATGAACATCTCATCA+GGG - chr6.2:64796849-64796868 None:intergenic 35.0%
ATTTCTCCCAACATTTGATG+TGG + chr6.2:64796867-64796886 MS.gene030021:CDS 35.0%
CAACATCTGTAACGATTGTT+CGG + chr6.2:64796740-64796759 MS.gene030021:CDS 35.0%
CAGTTCTCATAATCCTTATC+AGG - chr6.2:64796381-64796400 None:intergenic 35.0%
CATGAACAGTTGAACCAATA+GGG - chr6.2:64795723-64795742 None:intergenic 35.0%
CCTAACAAAATTACGAAACG+AGG + chr6.2:64797342-64797361 MS.gene030021:CDS 35.0%
CTGATAAGGATTATGAGAAC+TGG + chr6.2:64796379-64796398 MS.gene030021:CDS 35.0%
GAAAATCGTTCCAGTAACTA+AGG + chr6.2:64795981-64796000 MS.gene030021:CDS 35.0%
GAACAACCACATCAAATGTT+GGG - chr6.2:64796876-64796895 None:intergenic 35.0%
GTAGAGGAACCAAAAAATCA+GGG + chr6.2:64796685-64796704 MS.gene030021:CDS 35.0%
TAGAATGATTCCATACGTGT+CGG + chr6.2:64796582-64796601 MS.gene030021:intron 35.0%
TAGATCGAAGATGATACTGA+TGG + chr6.2:64797257-64797276 MS.gene030021:CDS 35.0%
TATAATTCGGATGCGTAACA+AGG - chr6.2:64797050-64797069 None:intergenic 35.0%
TATTCACCCGATCATTATGA+GGG + chr6.2:64797093-64797112 MS.gene030021:CDS 35.0%
TGGCTTAGAAACTTCTGATT+CGG + chr6.2:64796011-64796030 MS.gene030021:CDS 35.0%
TTCGGATTTGAAGAACCTTT+GGG - chr6.2:64795622-64795641 None:intergenic 35.0%
TTGAACAATGAGATAGTTGG+AGG + chr6.2:64796937-64796956 MS.gene030021:CDS 35.0%
TTGTTCTTTCATCTGGTCAT+TGG + chr6.2:64796890-64796909 MS.gene030021:CDS 35.0%
TTTCGGATTTGAAGAACCTT+TGG - chr6.2:64795623-64795642 None:intergenic 35.0%
! CAGGACTTGTTTGTGTATAA+CGG - chr6.2:64796315-64796334 None:intergenic 35.0%
! CCTCGTTTCGTAATTTTGTT+AGG - chr6.2:64797345-64797364 None:intergenic 35.0%
! TTACTGAAGCGTTTCAATAC+CGG + chr6.2:64797283-64797302 MS.gene030021:CDS 35.0%
! TTATTTTCCACCAATTCACC+GGG - chr6.2:64797171-64797190 None:intergenic 35.0%
! TTTTAACCGTGCAGCAAAAA+AGG + chr6.2:64797227-64797246 MS.gene030021:CDS 35.0%
!! CTTATTTTCCACCAATTCAC+CGG - chr6.2:64797172-64797191 None:intergenic 35.0%
AGATAGTTGGAGGACAATTG+TGG + chr6.2:64796947-64796966 MS.gene030021:CDS 40.0%
ATCTCATTCCAAGTATCCAC+AGG - chr6.2:64797420-64797439 None:intergenic 40.0%
ATGTATGAGCAACAGGTTAC+AGG + chr6.2:64797204-64797223 MS.gene030021:CDS 40.0%
ATTTCTTCGGATCAAATCGC+GGG - chr6.2:64796431-64796450 None:intergenic 40.0%
CAAATCCGAAACCACTTTCT+CGG + chr6.2:64795632-64795651 MS.gene030021:CDS 40.0%
CATGATGTGTATTCTTTGGC+AGG + chr6.2:64796521-64796540 MS.gene030021:CDS 40.0%
CCATGAACAGTTGAACCAAT+AGG - chr6.2:64795724-64795743 None:intergenic 40.0%
CTATTCACCCGATCATTATG+AGG + chr6.2:64797092-64797111 MS.gene030021:CDS 40.0%
CTCATAATGATCGGGTGAAT+AGG - chr6.2:64797094-64797113 None:intergenic 40.0%
CTGCCAAAGAATACACATCA+TGG - chr6.2:64796523-64796542 None:intergenic 40.0%
CTGTAACGATTGTTCGGATA+TGG + chr6.2:64796746-64796765 MS.gene030021:CDS 40.0%
GATGTGGTTGTTCTTTCATC+TGG + chr6.2:64796883-64796902 MS.gene030021:CDS 40.0%
GGTAGAGGAACCAAAAAATC+AGG + chr6.2:64796684-64796703 MS.gene030021:intron 40.0%
GTAGAGAGTTCACAAACTTC+TGG + chr6.2:64795757-64795776 MS.gene030021:CDS 40.0%
GTGATCTGTACCATGGAAAT+TGG + chr6.2:64796271-64796290 MS.gene030021:CDS 40.0%
GTTACGCATCCGAATTATAC+TGG + chr6.2:64797051-64797070 MS.gene030021:CDS 40.0%
TAACACACCACTGGAAACTA+TGG - chr6.2:64795884-64795903 None:intergenic 40.0%
TTAGGATCAGTGCTCCTATA+TGG - chr6.2:64797327-64797346 None:intergenic 40.0%
TTAGTGTCGTGTCTAGTATC+TGG + chr6.2:64796607-64796626 MS.gene030021:intron 40.0%
TTCCATGAACATCTCATCAG+GGG - chr6.2:64796848-64796867 None:intergenic 40.0%
TTGGTACTAGCCATTGGAAT+AGG - chr6.2:64796048-64796067 None:intergenic 40.0%
! ATCAACAGCATCGAAGCATT+TGG + chr6.2:64796997-64797016 MS.gene030021:CDS 40.0%
! GCAAACGATATTTCAGGTAG+AGG + chr6.2:64796669-64796688 MS.gene030021:intron 40.0%
! TATTTTCCACCAATTCACCG+GGG - chr6.2:64797170-64797189 None:intergenic 40.0%
!! CCTATTGGTTCAACTGTTCA+TGG + chr6.2:64795721-64795740 MS.gene030021:CDS 40.0%
!!! GGCAAGACATTGGCTTTTAT+TGG + chr6.2:64796468-64796487 MS.gene030021:CDS 40.0%
!!! TTGCGAGTTCCCTGATTTTT+TGG - chr6.2:64796697-64796716 None:intergenic 40.0%
AAAGTTAAACCTCTTGCCCC+CGG + chr6.2:64797150-64797169 MS.gene030021:CDS 45.0%
ACACAGACGCAGAATTGTCA+GGG + chr6.2:64796345-64796364 MS.gene030021:CDS 45.0%
ACACCACTGGAAACTATGGA+AGG - chr6.2:64795880-64795899 None:intergenic 45.0%
ACGCAGAATTGTCAGGGTAA+TGG + chr6.2:64796351-64796370 MS.gene030021:CDS 45.0%
AGGATTATGAGAACTGGCGA+TGG + chr6.2:64796385-64796404 MS.gene030021:CDS 45.0%
ATCCCCTGATGAGATGTTCA+TGG + chr6.2:64796843-64796862 MS.gene030021:CDS 45.0%
ATGGTCATCCTGGTCCATAT+AGG + chr6.2:64797310-64797329 MS.gene030021:CDS 45.0%
CAACCTTCCATAGTTTCCAG+TGG + chr6.2:64795874-64795893 MS.gene030021:CDS 45.0%
CCACTCACATCCTTAGTTAC+TGG - chr6.2:64795994-64796013 None:intergenic 45.0%
CCAGTAACTAAGGATGTGAG+TGG + chr6.2:64795991-64796010 MS.gene030021:CDS 45.0%
CGCAGAATTGTCAGGGTAAT+GGG + chr6.2:64796352-64796371 MS.gene030021:CDS 45.0%
CTAGTATCTGGTGTTCGTGT+CGG + chr6.2:64796619-64796638 MS.gene030021:intron 45.0%
GAGGAATTGGTACTAGCCAT+TGG - chr6.2:64796054-64796073 None:intergenic 45.0%
GCTAATGAGAGGCAAGACAT+TGG + chr6.2:64796458-64796477 MS.gene030021:CDS 45.0%
GGTGAAGCAGATTCACTCAA+GGG - chr6.2:64795961-64795980 None:intergenic 45.0%
GTAGGTTGTGATCTGTACCA+TGG + chr6.2:64796264-64796283 MS.gene030021:intron 45.0%
TAACCGTGCAGCAAAAAAGG+AGG + chr6.2:64797230-64797249 MS.gene030021:CDS 45.0%
TACACATCATGGACTCCATC+TGG - chr6.2:64796512-64796531 None:intergenic 45.0%
TAGTTGGAGGACAATTGTGG+TGG + chr6.2:64796950-64796969 MS.gene030021:CDS 45.0%
TCTGCGTCTGTGTCAATACA+GGG - chr6.2:64796338-64796357 None:intergenic 45.0%
TTCTGCGTCTGTGTCAATAC+AGG - chr6.2:64796339-64796358 None:intergenic 45.0%
TTGTTCGGATATGGTCGTCA+TGG + chr6.2:64796755-64796774 MS.gene030021:CDS 45.0%
! ATTTTCCACCAATTCACCGG+GGG - chr6.2:64797169-64797188 None:intergenic 45.0%
! TAGATTTTCTCCACACCAGC+TGG - chr6.2:64796817-64796836 None:intergenic 45.0%
!! AGAATTGTCAGGGTAATGGG+AGG + chr6.2:64796355-64796374 MS.gene030021:CDS 45.0%
!!! TTGCCTCCTTTTTTGCTGCA+CGG - chr6.2:64797236-64797255 None:intergenic 45.0%
ACCCGATCATTATGAGGGTG+GGG + chr6.2:64797098-64797117 MS.gene030021:CDS 50.0%
ATCATTATGAGGGTGGGGGA+TGG + chr6.2:64797103-64797122 MS.gene030021:CDS 50.0%
ATTACGAAACGAGGCCGAGA+TGG + chr6.2:64797351-64797370 MS.gene030021:CDS 50.0%
CACCCGATCATTATGAGGGT+GGG + chr6.2:64797097-64797116 MS.gene030021:CDS 50.0%
CGCTTCGATGTATGAGCAAC+AGG + chr6.2:64797197-64797216 MS.gene030021:CDS 50.0%
CGGTGAAGCAGATTCACTCA+AGG - chr6.2:64795962-64795981 None:intergenic 50.0%
GAAGCAGATTCACTCAAGGG+TGG - chr6.2:64795958-64795977 None:intergenic 50.0%
GACACAGACGCAGAATTGTC+AGG + chr6.2:64796344-64796363 MS.gene030021:CDS 50.0%
GACACTAACACCGACACGTA+TGG - chr6.2:64796595-64796614 None:intergenic 50.0%
GCGTTTCAATACCGGCATGA+TGG + chr6.2:64797291-64797310 MS.gene030021:CDS 50.0%
TCACCCGATCATTATGAGGG+TGG + chr6.2:64797096-64797115 MS.gene030021:CDS 50.0%
TCAGTGCTCCTATATGGACC+AGG - chr6.2:64797321-64797340 None:intergenic 50.0%
TCCCCCACCCTCATAATGAT+CGG - chr6.2:64797103-64797122 None:intergenic 50.0%
TTCCAAGTATCCACAGGTCC+CGG - chr6.2:64797414-64797433 None:intergenic 50.0%
TTCCGTTGCTCGAAACCAGA+TGG + chr6.2:64796494-64796513 MS.gene030021:CDS 50.0%
! CTCCATCTGGTTTCGAGCAA+CGG - chr6.2:64796499-64796518 None:intergenic 50.0%
AGGGAACTCGCAACATGCAG+CGG + chr6.2:64796704-64796723 MS.gene030021:CDS 55.0%
CACCACAGGATTGCTTGCAC+TGG + chr6.2:64797382-64797401 MS.gene030021:CDS 55.0%
CACCAGTGCAAGCAATCCTG+TGG - chr6.2:64797387-64797406 None:intergenic 55.0%
CAGTGCAAGCAATCCTGTGG+TGG - chr6.2:64797384-64797403 None:intergenic 55.0%
CCAGCTGGAGCAAAGTCGAA+TGG - chr6.2:64796802-64796821 None:intergenic 55.0%
CCATTCGACTTTGCTCCAGC+TGG + chr6.2:64796799-64796818 MS.gene030021:CDS 55.0%
CCCCCACCCTCATAATGATC+GGG - chr6.2:64797102-64797121 None:intergenic 55.0%
CCCGATCATTATGAGGGTGG+GGG + chr6.2:64797099-64797118 MS.gene030021:CDS 55.0%
CGCGGGATGTCACACTGAAA+AGG - chr6.2:64796414-64796433 None:intergenic 55.0%
CGTCTGTGTCAATACAGGGC+AGG - chr6.2:64796334-64796353 None:intergenic 55.0%
GACCAGGATGACCATCATGC+CGG - chr6.2:64797305-64797324 None:intergenic 55.0%
TACCGGCATGATGGTCATCC+TGG + chr6.2:64797300-64797319 MS.gene030021:CDS 55.0%
TGCAAGCAATCCTGTGGTGG+TGG - chr6.2:64797381-64797400 None:intergenic 55.0%
TGGAGGACAATTGTGGTGGC+CGG + chr6.2:64796954-64796973 MS.gene030021:CDS 55.0%
TGGAGGGTTGCATCTCCCAA+AGG + chr6.2:64795604-64795623 MS.gene030021:CDS 55.0%
TTCGCATGCCGAGACTTGTC+CGG - chr6.2:64796976-64796995 None:intergenic 55.0%
TTTCCCAGTGCATGACCCAC+CGG - chr6.2:64797133-64797152 None:intergenic 55.0%
! TTGCTTGCACTGGTGCATGC+CGG + chr6.2:64797392-64797411 MS.gene030021:CDS 55.0%
!! GGGTAATGGGAGGCCTGATA+AGG + chr6.2:64796365-64796384 MS.gene030021:CDS 55.0%
AACACCGGTGGGTCATGCAC+TGG + chr6.2:64797126-64797145 MS.gene030021:CDS 60.0%
ACACCGGTGGGTCATGCACT+GGG + chr6.2:64797127-64797146 MS.gene030021:CDS 60.0%
ACCAATTCACCGGGGGCAAG+AGG - chr6.2:64797162-64797181 None:intergenic 60.0%
ACCTCTTGCCCCCGGTGAAT+TGG + chr6.2:64797158-64797177 MS.gene030021:CDS 60.0%
AGATGGAAGGCCACCACCAC+AGG + chr6.2:64797368-64797387 MS.gene030021:CDS 60.0%
CGAAACGAGGCCGAGATGGA+AGG + chr6.2:64797355-64797374 MS.gene030021:CDS 60.0%
CGACTTTGCTCCAGCTGGTG+TGG + chr6.2:64796804-64796823 MS.gene030021:CDS 60.0%
TCTTGCCCCCGGTGAATTGG+TGG + chr6.2:64797161-64797180 MS.gene030021:CDS 60.0%
TGCCGGGACCTGTGGATACT+TGG + chr6.2:64797409-64797428 MS.gene030021:CDS 60.0%
TGTGGTGGCCGGACAAGTCT+CGG + chr6.2:64796965-64796984 MS.gene030021:CDS 60.0%
! TGCTTGCACTGGTGCATGCC+GGG + chr6.2:64797393-64797412 MS.gene030021:CDS 60.0%
!! GTGGTGGTGGCCTTCCATCT+CGG - chr6.2:64797368-64797387 None:intergenic 60.0%
GAGGGTGGGGGATGGAACAC+CGG + chr6.2:64797111-64797130 MS.gene030021:CDS 65.0%
GTGGGGGATGGAACACCGGT+GGG + chr6.2:64797115-64797134 MS.gene030021:CDS 65.0%
CTGGTGCATGCCGGGACCTG+TGG + chr6.2:64797401-64797420 MS.gene030021:CDS 70.0%
GGTGGGGGATGGAACACCGG+TGG + chr6.2:64797114-64797133 MS.gene030021:CDS 70.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 64795598 64797488 64795598 ID=MS.gene030021
chr6.2 mRNA 64795598 64797488 64795598 ID=MS.gene030021.t1;Parent=MS.gene030021
chr6.2 exon 64795598 64796084 64795598 ID=MS.gene030021.t1.exon1;Parent=MS.gene030021.t1
chr6.2 CDS 64795598 64796084 64795598 ID=cds.MS.gene030021.t1;Parent=MS.gene030021.t1
chr6.2 exon 64796268 64796542 64796268 ID=MS.gene030021.t1.exon2;Parent=MS.gene030021.t1
chr6.2 CDS 64796268 64796542 64796268 ID=cds.MS.gene030021.t1;Parent=MS.gene030021.t1
chr6.2 exon 64796685 64797488 64796685 ID=MS.gene030021.t1.exon3;Parent=MS.gene030021.t1
chr6.2 CDS 64796685 64797488 64796685 ID=cds.MS.gene030021.t1;Parent=MS.gene030021.t1
Gene Sequence

>MS.gene030021

ATGAATTGGAGGGTTGCATCTCCCAAAGGTTCTTCAAATCCGAAACCACTTTCTCGGATTATATTTTCAGTTGGAGTAGTGGCAGTATTCATAACTTTTGCTTCATGGTTTTTTCTTTCATACCCTATTGGTTCAACTGTTCATGGTTATTTCAATGGTGTAGAGAGTTCACAAACTTCTGGTTTATCAGTCTCTCAGAAAATCAACACTACTTCTGTTGATCTTCACAAGAATTCAAGTTTAGATTTAGTAGATAGTAAATCACTCATTGATCTGCAACCTTCCATAGTTTCCAGTGGTGTGTTAAGTGATAATAGTAGCAAGATAGAACAAATTGATACTAATTCAAATTCGCAACCACCCTTGAGTGAATCTGCTTCACCGAAAATCGTTCCAGTAACTAAGGATGTGAGTGGCTTAGAAACTTCTGATTCGGCTTCAAAAGAACCTATTCCAATGGCTAGTACCAATTCCTCAATTATGAAAGGTAATGTTAGTTTGATTTGCTTTGTTCTCTTTTGGAAATACAATACAGCCGTAATCGTTAGTGTTTGTATCTTGTAAGAAAGAATTTCACATGGACAATTCTTTCCATTGATTTTCTTGAAATTACTCTACAAGTTTTTATATCTTATCTGCTTTTTGAATAGTTGTTTTTATTGTCAAGTAGGTTGTGATCTGTACCATGGAAATTGGATATATGATTCATCGGGACCGTTATACACAAACAAGTCCTGCCCTGTATTGACACAGACGCAGAATTGTCAGGGTAATGGGAGGCCTGATAAGGATTATGAGAACTGGCGATGGAAGCCTTTTCAGTGTGACATCCCGCGATTTGATCCGAAGAAATTTTTGGAGCTAATGAGAGGCAAGACATTGGCTTTTATTGGAGATTCCGTTGCTCGAAACCAGATGGAGTCCATGATGTGTATTCTTTGGCAGGTTATTTTCATTCCATACTAATTTTATTTGCATAACTAATAGAATGATTCCATACGTGTCGGTGTTAGTGTCGTGTCTAGTATCTGGTGTTCGTGTCGGTGCTTCATAGAAATTAAATACTTAATTGCAAACGATATTTCAGGTAGAGGAACCAAAAAATCAGGGAACTCGCAACATGCAGCGGTATTATTTTGAGTCAACATCTGTAACGATTGTTCGGATATGGTCGTCATGGCTTGTCAAACACAATTCAGAACCATTCGACTTTGCTCCAGCTGGTGTGGAGAAAATCTATCTCGAATCCCCTGATGAGATGTTCATGGAATTTCTCCCAACATTTGATGTGGTTGTTCTTTCATCTGGTCATTGGTTTACTAAACAATCAGTATACATCTTGAACAATGAGATAGTTGGAGGACAATTGTGGTGGCCGGACAAGTCTCGGCATGCGAAGATCAACAGCATCGAAGCATTTGGTATATCTGTTGAAACAATTCTGACTGCCCTTGTTACGCATCCGAATTATACTGGACTTACAATTTTACGTTCCTATTCACCCGATCATTATGAGGGTGGGGGATGGAACACCGGTGGGTCATGCACTGGGAAAGTTAAACCTCTTGCCCCCGGTGAATTGGTGGAAAATAAGTATCTCGCTTCGATGTATGAGCAACAGGTTACAGGTTTTAACCGTGCAGCAAAAAAGGAGGCAAATAGATCGAAGATGATACTGATGGATGTTACTGAAGCGTTTCAATACCGGCATGATGGTCATCCTGGTCCATATAGGAGCACTGATCCTAACAAAATTACGAAACGAGGCCGAGATGGAAGGCCACCACCACAGGATTGCTTGCACTGGTGCATGCCGGGACCTGTGGATACTTGGAATGAGATTGTGTTTGAAATCATTAAGAGAGAATACGAAGGCAATAACATATCATGA
Protein sequence

>MS.gene030021.t1

MNWRVASPKGSSNPKPLSRIIFSVGVVAVFITFASWFFLSYPIGSTVHGYFNGVESSQTSGLSVSQKINTTSVDLHKNSSLDLVDSKSLIDLQPSIVSSGVLSDNSSKIEQIDTNSNSQPPLSESASPKIVPVTKDVSGLETSDSASKEPIPMASTNSSIMKGCDLYHGNWIYDSSGPLYTNKSCPVLTQTQNCQGNGRPDKDYENWRWKPFQCDIPRFDPKKFLELMRGKTLAFIGDSVARNQMESMMCILWQVEEPKNQGTRNMQRYYFESTSVTIVRIWSSWLVKHNSEPFDFAPAGVEKIYLESPDEMFMEFLPTFDVVVLSSGHWFTKQSVYILNNEIVGGQLWWPDKSRHAKINSIEAFGISVETILTALVTHPNYTGLTILRSYSPDHYEGGGWNTGGSCTGKVKPLAPGELVENKYLASMYEQQVTGFNRAAKKEANRSKMILMDVTEAFQYRHDGHPGPYRSTDPNKITKRGRDGRPPPQDCLHWCMPGPVDTWNEIVFEIIKREYEGNNIS