Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005227.t1 | RHN80765.1 | 98.7 | 447 | 6 | 0 | 1 | 447 | 1 | 447 | 7.80E-251 | 875.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005227.t1 | Q39230 | 74.7 | 451 | 110 | 2 | 1 | 447 | 1 | 451 | 2.8e-196 | 686.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005227.t1 | A0A396JX57 | 98.7 | 447 | 6 | 0 | 1 | 447 | 1 | 447 | 5.6e-251 | 875.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene43889 | MS.gene005227 | PPI |
| MS.gene38588 | MS.gene005227 | PPI |
| MS.gene013131 | MS.gene005227 | PPI |
| MS.gene055486 | MS.gene005227 | PPI |
| MS.gene026998 | MS.gene005227 | PPI |
| MS.gene45075 | MS.gene005227 | PPI |
| MS.gene005227 | MS.gene35246 | PPI |
| MS.gene82886 | MS.gene005227 | PPI |
| MS.gene027585 | MS.gene005227 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005227.t1 | MTR_1g082850 | 99.329 | 447 | 3 | 0 | 1 | 447 | 1 | 447 | 0.0 | 926 |
| MS.gene005227.t1 | MTR_3g099470 | 36.041 | 394 | 233 | 8 | 46 | 426 | 151 | 538 | 2.80e-75 | 245 |
| MS.gene005227.t1 | MTR_7g029025 | 75.641 | 156 | 16 | 2 | 288 | 442 | 123 | 257 | 1.25e-72 | 231 |
| MS.gene005227.t1 | MTR_7g029025 | 84.615 | 130 | 20 | 0 | 1 | 130 | 1 | 130 | 1.17e-60 | 200 |
| MS.gene005227.t1 | MTR_3g099470 | 31.090 | 312 | 207 | 5 | 46 | 355 | 151 | 456 | 3.21e-47 | 169 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005227.t1 | AT5G27470 | 76.497 | 451 | 102 | 3 | 1 | 447 | 1 | 451 | 0.0 | 728 |
| MS.gene005227.t1 | AT1G11870 | 33.738 | 412 | 249 | 8 | 27 | 426 | 106 | 505 | 3.06e-73 | 239 |
| MS.gene005227.t1 | AT1G11870 | 33.738 | 412 | 249 | 8 | 27 | 426 | 104 | 503 | 4.28e-73 | 239 |
| MS.gene005227.t1 | AT1G11870 | 36.313 | 358 | 208 | 7 | 85 | 426 | 18 | 371 | 8.05e-72 | 231 |
| MS.gene005227.t1 | AT1G11870 | 28.655 | 342 | 231 | 5 | 27 | 367 | 106 | 435 | 2.80e-46 | 166 |
| MS.gene005227.t1 | AT1G11870 | 29.204 | 339 | 227 | 5 | 19 | 356 | 98 | 424 | 3.94e-46 | 166 |
| MS.gene005227.t1 | AT1G11870 | 29.530 | 298 | 197 | 5 | 27 | 323 | 106 | 391 | 4.90e-39 | 145 |
Find 101 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTAAAGTTCTTCATCAAAT+TGG | 0.134658 | 1.4:-67042628 | None:intergenic |
| AAACCTCTTGAATTCTAAAT+TGG | 0.181417 | 1.4:+67041553 | MS.gene005227:CDS |
| TGAGATTCACGGATGATTTC+AGG | 0.189941 | 1.4:-67041144 | None:intergenic |
| CAAATTGTTTCCATCGTATC+TGG | 0.244081 | 1.4:+67044241 | MS.gene005227:CDS |
| CCCATGAATCATTATCATTT+GGG | 0.270325 | 1.4:-67043712 | None:intergenic |
| CGTATCGAATTTCTAATTTA+CGG | 0.289372 | 1.4:-67044372 | None:intergenic |
| TTCCCTTTGGCTTCATTGTT+CGG | 0.292118 | 1.4:-67045514 | None:intergenic |
| TCCCATGAATCATTATCATT+TGG | 0.297281 | 1.4:-67043713 | None:intergenic |
| AATCAAGCTCTAATCATGTT+TGG | 0.298512 | 1.4:+67042515 | MS.gene005227:CDS |
| TCTCTACTCCATCCTCCTTC+TGG | 0.313005 | 1.4:-67045432 | None:intergenic |
| GTATCGAATTTCTAATTTAC+GGG | 0.328738 | 1.4:-67044371 | None:intergenic |
| GGCCTTCGATTTCTTCCCTT+TGG | 0.338225 | 1.4:-67045527 | None:intergenic |
| ATCAAGCTCTAATCATGTTT+GGG | 0.343110 | 1.4:+67042516 | MS.gene005227:CDS |
| GTAAAGTTCTTCATCAAATT+GGG | 0.357931 | 1.4:-67042627 | None:intergenic |
| TATGCTTACTCGCTTGAGTT+TGG | 0.360842 | 1.4:-67041373 | None:intergenic |
| GTCCTTAGGCCATTCATGTT+TGG | 0.363259 | 1.4:+67045463 | MS.gene005227:CDS |
| TACGATGGAAACAATTTGAT+AGG | 0.382311 | 1.4:-67044236 | None:intergenic |
| TCTCATGGTCGGGATACTTT+AGG | 0.390122 | 1.4:+67043638 | MS.gene005227:CDS |
| TCCACATGATTCTTGAGCTT+CGG | 0.390757 | 1.4:-67041759 | None:intergenic |
| CAATCTCTTCCGAGTTGAAA+AGG | 0.398760 | 1.4:+67041113 | MS.gene005227:CDS |
| CCCCAAATGATAATGATTCA+TGG | 0.406858 | 1.4:+67043711 | MS.gene005227:CDS |
| GAGATAGCTGATTTGAAGAA+AGG | 0.411201 | 1.4:+67041798 | MS.gene005227:CDS |
| CTTTGGCTTCATTGTTCGGT+TGG | 0.412270 | 1.4:-67045510 | None:intergenic |
| ATGAATGGCCTAAGGACTTC+TGG | 0.414262 | 1.4:-67045457 | None:intergenic |
| ACGTCTTTCTTGATGAAGAA+TGG | 0.419469 | 1.4:-67042581 | None:intergenic |
| GAATTTCTAATTTACGGGCT+TGG | 0.419762 | 1.4:-67044366 | None:intergenic |
| GTAGTCTGTACAATTTGAAC+AGG | 0.430316 | 1.4:-67044344 | None:intergenic |
| TCTTGCTTTCGTAAAGAAGC+TGG | 0.438723 | 1.4:+67043614 | MS.gene005227:CDS |
| TTCCAGCTTCTAAAACATAC+AGG | 0.439898 | 1.4:+67044311 | MS.gene005227:CDS |
| AATTCTAAATTGGAAACCAT+TGG | 0.444218 | 1.4:+67041563 | MS.gene005227:CDS |
| ATGATAGGAGCCGATGTTGC+TGG | 0.453917 | 1.4:+67042452 | MS.gene005227:intron |
| GCCGATGTTGCTGGAGGTAG+AGG | 0.459004 | 1.4:+67042461 | MS.gene005227:CDS |
| TTGTTCGGTTGGTTCTTGAA+TGG | 0.460611 | 1.4:-67045499 | None:intergenic |
| ACTGCTCCACCTTCTCGAAC+TGG | 0.468726 | 1.4:-67043676 | None:intergenic |
| CTTCTTTAGGTAACCGGGGA+AGG | 0.469820 | 1.4:+67043408 | MS.gene005227:intron |
| TTGGGCTAGTTGAGCACACT+TGG | 0.471518 | 1.4:-67042609 | None:intergenic |
| ACAATCTTGTTGTCCGAACA+TGG | 0.475085 | 1.4:+67041718 | MS.gene005227:CDS |
| TAGAGATACCAGAAGTCCTT+AGG | 0.475235 | 1.4:+67045449 | MS.gene005227:CDS |
| TCGGTTGGTTCTTGAATGGC+AGG | 0.477198 | 1.4:-67045495 | None:intergenic |
| CATGCTTGCTGTAGGTATGC+TGG | 0.481103 | 1.4:+67043584 | MS.gene005227:intron |
| TTATCAATCTCGACAAAGAA+TGG | 0.490410 | 1.4:+67041205 | MS.gene005227:CDS |
| GAGATTCACGGATGATTTCA+GGG | 0.494661 | 1.4:-67041143 | None:intergenic |
| CCTTCTCGAACTGGTGAACT+CGG | 0.504962 | 1.4:-67043667 | None:intergenic |
| ACAAACCTCATCATTGCTGA+TGG | 0.508461 | 1.4:-67041609 | None:intergenic |
| ATTTGATGAAGAACTTTACA+AGG | 0.508998 | 1.4:+67042631 | MS.gene005227:CDS |
| TTCCAAACATGAATGGCCTA+AGG | 0.510108 | 1.4:-67045465 | None:intergenic |
| AATCTCTTCCGAGTTGAAAA+GGG | 0.515720 | 1.4:+67041114 | MS.gene005227:CDS |
| CGAGTTTATTTCTAAATCTG+AGG | 0.522194 | 1.4:+67041481 | MS.gene005227:CDS |
| GTTCTCTAGTATGCAGCAAA+TGG | 0.522458 | 1.4:-67045407 | None:intergenic |
| CAAGTTACCTTAGGGGTAGA+CGG | 0.525382 | 1.4:-67043506 | None:intergenic |
| CGTAAAGAAGCTGGATCTCA+TGG | 0.526898 | 1.4:+67043623 | MS.gene005227:CDS |
| CCCAAATGATAATGATTCAT+GGG | 0.530653 | 1.4:+67043712 | MS.gene005227:CDS |
| AACGACGGCGTTGAGATTCA+CGG | 0.531799 | 1.4:-67041155 | None:intergenic |
| ATCCTACCCGTCTACCCCTA+AGG | 0.539398 | 1.4:+67043499 | MS.gene005227:CDS |
| AATTCGATACGGACAGAAGA+AGG | 0.542480 | 1.4:+67044384 | MS.gene005227:CDS |
| ATACTTATCATCTCCTTCCC+CGG | 0.545996 | 1.4:-67043421 | None:intergenic |
| GAGAACAACCAGAAGGAGGA+TGG | 0.546439 | 1.4:+67045424 | MS.gene005227:CDS |
| AAGTTACCTTAGGGGTAGAC+GGG | 0.552419 | 1.4:-67043505 | None:intergenic |
| AACCGAACAATGAAGCCAAA+GGG | 0.552476 | 1.4:+67045512 | MS.gene005227:CDS |
| CAACCGAACAATGAAGCCAA+AGG | 0.552548 | 1.4:+67045511 | MS.gene005227:CDS |
| ACCTCTACCTCCAGCAACAT+CGG | 0.553887 | 1.4:-67042462 | None:intergenic |
| AGAAGCTGGATCTCATGGTC+GGG | 0.554511 | 1.4:+67043628 | MS.gene005227:CDS |
| TTCGTCAACTACTTCGACGC+TGG | 0.554815 | 1.4:-67041181 | None:intergenic |
| GTGCATATCATTCAGACGAA+TGG | 0.559096 | 1.4:+67043472 | MS.gene005227:CDS |
| AGTTCACCAGTTCGAGAAGG+TGG | 0.559770 | 1.4:+67043670 | MS.gene005227:CDS |
| TTTGTTGAACTCCACTCTCA+CGG | 0.563048 | 1.4:+67045372 | MS.gene005227:CDS |
| TTAGGGGTAGACGGGTAGGA+TGG | 0.567147 | 1.4:-67043497 | None:intergenic |
| CCTTTCAGTAGCCGTGAGAG+TGG | 0.571162 | 1.4:-67045383 | None:intergenic |
| CAATCTTGTTGTCCGAACAT+GGG | 0.572903 | 1.4:+67041719 | MS.gene005227:CDS |
| TTCTAAAACATACAGGGAGT+TGG | 0.576857 | 1.4:+67044318 | MS.gene005227:CDS |
| AAGAAGCTGGATCTCATGGT+CGG | 0.582102 | 1.4:+67043627 | MS.gene005227:CDS |
| ACGATGGAAACAATTTGATA+GGG | 0.582357 | 1.4:-67044235 | None:intergenic |
| GGTTTCTATCTCAAAGGAGA+TGG | 0.585776 | 1.4:+67042482 | MS.gene005227:CDS |
| CTCAGATTTAGAAATAAACT+CGG | 0.588681 | 1.4:-67041480 | None:intergenic |
| CCACTCTCACGGCTACTGAA+AGG | 0.590045 | 1.4:+67045383 | MS.gene005227:CDS |
| CCGAGTTCACCAGTTCGAGA+AGG | 0.591093 | 1.4:+67043667 | MS.gene005227:CDS |
| GGTAGAGGTTTCTATCTCAA+AGG | 0.591210 | 1.4:+67042476 | MS.gene005227:CDS |
| TTTCCAATTTAGAATTCAAG+AGG | 0.592409 | 1.4:-67041556 | None:intergenic |
| TGTTCCCATCAGCAATGATG+AGG | 0.598513 | 1.4:+67041604 | MS.gene005227:CDS |
| AATCTTGTTGTCCGAACATG+GGG | 0.604845 | 1.4:+67041720 | MS.gene005227:CDS |
| ATCATGAACGAGGTTACCAA+TGG | 0.612228 | 1.4:-67041579 | None:intergenic |
| CCATGAATCATTATCATTTG+GGG | 0.613961 | 1.4:-67043711 | None:intergenic |
| CGTAAATTAGAAATTCGATA+CGG | 0.619082 | 1.4:+67044373 | MS.gene005227:CDS |
| TAGATCATACTTCTTAGCTG+CGG | 0.628252 | 1.4:-67044278 | None:intergenic |
| CAAACCTCATCATTGCTGAT+GGG | 0.630129 | 1.4:-67041608 | None:intergenic |
| CTAAATTCAAGTTACCTTAG+GGG | 0.638039 | 1.4:-67043513 | None:intergenic |
| TACCTTAGGGGTAGACGGGT+AGG | 0.642685 | 1.4:-67043501 | None:intergenic |
| TGATTCATGGGACATGCATG+AGG | 0.643636 | 1.4:+67043724 | MS.gene005227:CDS |
| TCCAGCTTCTAAAACATACA+GGG | 0.644409 | 1.4:+67044312 | MS.gene005227:CDS |
| AGAAGTATGATCTAGAAGCA+TGG | 0.654923 | 1.4:+67044287 | MS.gene005227:CDS |
| GTTCAAAGCTCCAGATACGA+TGG | 0.655676 | 1.4:-67044251 | None:intergenic |
| AGCCAAAGGGAAGAAATCGA+AGG | 0.662628 | 1.4:+67045525 | MS.gene005227:CDS |
| ACCGAAGCTCAAGAATCATG+TGG | 0.667853 | 1.4:+67041758 | MS.gene005227:CDS |
| CTCTGAGGACTTCTACAAAG+CGG | 0.670185 | 1.4:+67043760 | MS.gene005227:CDS |
| ACTAGAGAACAACCAGAAGG+AGG | 0.673239 | 1.4:+67045420 | MS.gene005227:CDS |
| ATAGGAGCCGATGTTGCTGG+AGG | 0.692103 | 1.4:+67042455 | MS.gene005227:intron |
| CTTCGACGCTGGCAAAACGA+CGG | 0.699893 | 1.4:-67041170 | None:intergenic |
| AGAAGTCAACAAAATCAACA+AGG | 0.710411 | 1.4:+67041344 | MS.gene005227:CDS |
| CATACTAGAGAACAACCAGA+AGG | 0.710513 | 1.4:+67045417 | MS.gene005227:CDS |
| TGGGAACAGAATCATGAACG+AGG | 0.777650 | 1.4:-67041589 | None:intergenic |
| TCTGAATGATATGCACACAG+AGG | 0.783230 | 1.4:-67043465 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCTAAAAAACAAATTATA+AGG | - | chr1.4:67042773-67042792 | None:intergenic | 10.0% |
| !! | TACATGTTTAATATTAAAAT+TGG | + | chr1.4:67043537-67043556 | MS.gene005227:intron | 10.0% |
| !! | ATATTAGATACATTCAAAAT+AGG | - | chr1.4:67042414-67042433 | None:intergenic | 15.0% |
| !! | ATTCCAAAAAAATTTAAACA+AGG | - | chr1.4:67044644-67044663 | None:intergenic | 15.0% |
| !! | CTTATAATTGAATTCTTATA+AGG | - | chr1.4:67042695-67042714 | None:intergenic | 15.0% |
| !! | TTATATAAATTGATATAACG+AGG | - | chr1.4:67044533-67044552 | None:intergenic | 15.0% |
| !! | TTCACTATAATTAATAATGA+TGG | - | chr1.4:67043208-67043227 | None:intergenic | 15.0% |
| !!! | AAGAAGTTTTTATTTTTTTG+TGG | + | chr1.4:67043227-67043246 | MS.gene005227:intron | 15.0% |
| !!! | CACTTTTACATTATATTTTA+AGG | - | chr1.4:67042240-67042259 | None:intergenic | 15.0% |
| !!! | GATAATTGTTTTTTAATCTT+GGG | + | chr1.4:67043559-67043578 | MS.gene005227:intron | 15.0% |
| !!! | TATATAATATAGTTTTGGTA+TGG | + | chr1.4:67043846-67043865 | MS.gene005227:intron | 15.0% |
| !!! | TATCCTTGTTTAAATTTTTT+TGG | + | chr1.4:67044638-67044657 | MS.gene005227:intron | 15.0% |
| !!! | TATTCTAAGAATATTAAACA+AGG | - | chr1.4:67045035-67045054 | None:intergenic | 15.0% |
| !!! | TCATAATTTTTTTAACTGTT+AGG | + | chr1.4:67045295-67045314 | MS.gene005227:intron | 15.0% |
| !! | AAAATAAGCAAAACATGATT+AGG | - | chr1.4:67041294-67041313 | None:intergenic | 20.0% |
| !! | CTTTAGATTAATTTAACACT+GGG | - | chr1.4:67043881-67043900 | None:intergenic | 20.0% |
| !!! | AATCATGTTTTGCTTATTTT+AGG | + | chr1.4:67041294-67041313 | MS.gene005227:intron | 20.0% |
| !!! | CTTTAATATTTTGTGAGATT+TGG | + | chr1.4:67041879-67041898 | MS.gene005227:intron | 20.0% |
| !!! | GCAAATAAAGTTATTGATTT+GGG | - | chr1.4:67044064-67044083 | None:intergenic | 20.0% |
| !!! | GGATAATTGTTTTTTAATCT+TGG | + | chr1.4:67043558-67043577 | MS.gene005227:intron | 20.0% |
| !!! | TAGAATAATTTAGTTTGTGA+TGG | + | chr1.4:67044749-67044768 | MS.gene005227:intron | 20.0% |
| !!! | TTGTTTTCAAATTCAATGTA+TGG | + | chr1.4:67042012-67042031 | MS.gene005227:intron | 20.0% |
| !!! | TTTTTGTATTATACTCTTTC+TGG | + | chr1.4:67042993-67043012 | MS.gene005227:intron | 20.0% |
| ! | AAAATATCAACTATATACCG+AGG | - | chr1.4:67042732-67042751 | None:intergenic | 25.0% |
| ! | AAACCTCTTGAATTCTAAAT+TGG | + | chr1.4:67041553-67041572 | MS.gene005227:CDS | 25.0% |
| ! | AATTCTAAATTGGAAACCAT+TGG | + | chr1.4:67041563-67041582 | MS.gene005227:CDS | 25.0% |
| ! | AATTGTTTCATGTGTGTTAT+AGG | + | chr1.4:67042112-67042131 | MS.gene005227:intron | 25.0% |
| ! | AGAATAAGAGTCATTGAAAA+GGG | + | chr1.4:67043158-67043177 | MS.gene005227:intron | 25.0% |
| ! | AGGAAGAATTTAGAAATTTC+AGG | - | chr1.4:67044958-67044977 | None:intergenic | 25.0% |
| ! | AGTGTTTGTATTGAAATTCA+TGG | + | chr1.4:67041674-67041693 | MS.gene005227:intron | 25.0% |
| ! | AGTTTAACTGCAGAATATAT+TGG | - | chr1.4:67044799-67044818 | None:intergenic | 25.0% |
| ! | ATACCTAAGTTCAATATTGA+TGG | + | chr1.4:67044412-67044431 | MS.gene005227:intron | 25.0% |
| ! | ATATTGCTCAAGTAAAAACA+TGG | - | chr1.4:67045230-67045249 | None:intergenic | 25.0% |
| ! | ATTTATATAACCCATTCTTC+TGG | + | chr1.4:67044543-67044562 | MS.gene005227:intron | 25.0% |
| ! | ATTTGATGAAGAACTTTACA+AGG | + | chr1.4:67042631-67042650 | MS.gene005227:CDS | 25.0% |
| ! | CCAGTGTTAAATTAATCTAA+AGG | + | chr1.4:67043879-67043898 | MS.gene005227:intron | 25.0% |
| ! | CCTTTAGATTAATTTAACAC+TGG | - | chr1.4:67043882-67043901 | None:intergenic | 25.0% |
| ! | CGTAAATTAGAAATTCGATA+CGG | + | chr1.4:67044373-67044392 | MS.gene005227:CDS | 25.0% |
| ! | CGTATCGAATTTCTAATTTA+CGG | - | chr1.4:67044375-67044394 | None:intergenic | 25.0% |
| ! | CTAACATATATGAAGAACTT+GGG | - | chr1.4:67044508-67044527 | None:intergenic | 25.0% |
| ! | CTATTGTACAAATCATGAAT+CGG | - | chr1.4:67042150-67042169 | None:intergenic | 25.0% |
| ! | CTCAGATTTAGAAATAAACT+CGG | - | chr1.4:67041483-67041502 | None:intergenic | 25.0% |
| ! | GTAAAGTTCTTCATCAAATT+GGG | - | chr1.4:67042630-67042649 | None:intergenic | 25.0% |
| ! | GTATCGAATTTCTAATTTAC+GGG | - | chr1.4:67044374-67044393 | None:intergenic | 25.0% |
| ! | GTGTTTGTATTGAAATTCAT+GGG | + | chr1.4:67041675-67041694 | MS.gene005227:intron | 25.0% |
| ! | TAACACACATGAAACAATTA+AGG | - | chr1.4:67042111-67042130 | None:intergenic | 25.0% |
| ! | TACATTTGTATTACATCACT+TGG | + | chr1.4:67044028-67044047 | MS.gene005227:intron | 25.0% |
| ! | TCTAACATATATGAAGAACT+TGG | - | chr1.4:67044509-67044528 | None:intergenic | 25.0% |
| ! | TGTAAAGTTCTTCATCAAAT+TGG | - | chr1.4:67042631-67042650 | None:intergenic | 25.0% |
| ! | TTAGAAATTTCAGGAAGAAT+GGG | - | chr1.4:67044949-67044968 | None:intergenic | 25.0% |
| ! | TTAGAAATTTCCAGAAGAAT+GGG | - | chr1.4:67044556-67044575 | None:intergenic | 25.0% |
| ! | TTCAATAGTTTCTACATTTC+TGG | + | chr1.4:67042381-67042400 | MS.gene005227:intron | 25.0% |
| ! | TTCACACTTACTAAGAAATT+TGG | + | chr1.4:67043043-67043062 | MS.gene005227:intron | 25.0% |
| ! | TTTAGAAATTTCAGGAAGAA+TGG | - | chr1.4:67044950-67044969 | None:intergenic | 25.0% |
| ! | TTTAGAAATTTCCAGAAGAA+TGG | - | chr1.4:67044557-67044576 | None:intergenic | 25.0% |
| ! | TTTCAAATTCAATGTATGGT+GGG | + | chr1.4:67042016-67042035 | MS.gene005227:intron | 25.0% |
| !! | AAAGTTTTTCCAAACATGAA+TGG | - | chr1.4:67045475-67045494 | None:intergenic | 25.0% |
| !! | AACTAAATTCAAGTTACCTT+AGG | - | chr1.4:67043518-67043537 | None:intergenic | 25.0% |
| !! | AAGAAGTTATTCTAAAGAGA+GGG | + | chr1.4:67044471-67044490 | MS.gene005227:intron | 25.0% |
| !! | ACTAAATTCAAGTTACCTTA+GGG | - | chr1.4:67043517-67043536 | None:intergenic | 25.0% |
| !! | AGGATTTTCTTTTCTTCTTT+AGG | + | chr1.4:67043395-67043414 | MS.gene005227:intron | 25.0% |
| !! | CAATAATGTTATTTGCAGTT+TGG | - | chr1.4:67042820-67042839 | None:intergenic | 25.0% |
| !! | CATGGGATAATATATGTTTT+AGG | + | chr1.4:67041692-67041711 | MS.gene005227:intron | 25.0% |
| !! | CCTTTGGAAAAATTGAAAAA+TGG | - | chr1.4:67042914-67042933 | None:intergenic | 25.0% |
| !! | GGCAAATAAAGTTATTGATT+TGG | - | chr1.4:67044065-67044084 | None:intergenic | 25.0% |
| !! | TAAGAAGTTATTCTAAAGAG+AGG | + | chr1.4:67044470-67044489 | MS.gene005227:intron | 25.0% |
| !! | TATTTTCTTCTCTTATGTCT+TGG | + | chr1.4:67044107-67044126 | MS.gene005227:intron | 25.0% |
| !! | TCTTGTTATAAAGTTAAGTG+AGG | - | chr1.4:67042945-67042964 | None:intergenic | 25.0% |
| !! | TTTCCAATTTAGAATTCAAG+AGG | - | chr1.4:67041559-67041578 | None:intergenic | 25.0% |
| !! | TTTTCAAATTCAATGTATGG+TGG | + | chr1.4:67042015-67042034 | MS.gene005227:intron | 25.0% |
| !!! | AACAACGATTTTGTTTTTTG+AGG | - | chr1.4:67042051-67042070 | None:intergenic | 25.0% |
| !!! | AATAATTTAGTTTGTGATGG+TGG | + | chr1.4:67044752-67044771 | MS.gene005227:intron | 25.0% |
| !!! | ACAACTAAAAGAAAAGTGTT+GGG | - | chr1.4:67042082-67042101 | None:intergenic | 25.0% |
| !!! | CCATTTTTCAATTTTTCCAA+AGG | + | chr1.4:67042911-67042930 | MS.gene005227:intron | 25.0% |
| !!! | TGATTTTGTTGACTTCTTTA+CGG | - | chr1.4:67041341-67041360 | None:intergenic | 25.0% |
| !!! | TGTTTCTTTTTTCTGTTGAT+TGG | + | chr1.4:67042843-67042862 | MS.gene005227:intron | 25.0% |
| AAATCAGAGGAAAAAGATTG+GGG | - | chr1.4:67043364-67043383 | None:intergenic | 30.0% | |
| AAGCCATCAATATTGAACTT+AGG | - | chr1.4:67044418-67044437 | None:intergenic | 30.0% | |
| ACATGAAACAATTAAGGAAG+CGG | - | chr1.4:67042105-67042124 | None:intergenic | 30.0% | |
| ACGATGGAAACAATTTGATA+GGG | - | chr1.4:67044238-67044257 | None:intergenic | 30.0% | |
| ACTGTGATTACAAAAACAAG+AGG | - | chr1.4:67041934-67041953 | None:intergenic | 30.0% | |
| AGAAGTCAACAAAATCAACA+AGG | + | chr1.4:67041344-67041363 | MS.gene005227:CDS | 30.0% | |
| AGATGCATTAAACATTCCTT+TGG | - | chr1.4:67043947-67043966 | None:intergenic | 30.0% | |
| AGTATTATTCGCTAACTGTT+GGG | + | chr1.4:67044836-67044855 | MS.gene005227:intron | 30.0% | |
| CAAATCAGAGGAAAAAGATT+GGG | - | chr1.4:67043365-67043384 | None:intergenic | 30.0% | |
| CCATGAATCATTATCATTTG+GGG | - | chr1.4:67043714-67043733 | None:intergenic | 30.0% | |
| CCCATGAATCATTATCATTT+GGG | - | chr1.4:67043715-67043734 | None:intergenic | 30.0% | |
| CTTAGAATAACTGTCATTGA+TGG | + | chr1.4:67045046-67045065 | MS.gene005227:intron | 30.0% | |
| GAAAAAGATTGCTGAAAAAG+AGG | + | chr1.4:67041511-67041530 | MS.gene005227:CDS | 30.0% | |
| GAGAATAAGAGTCATTGAAA+AGG | + | chr1.4:67043157-67043176 | MS.gene005227:intron | 30.0% | |
| TAACATAAAAAGCTTCAGCT+GGG | - | chr1.4:67042315-67042334 | None:intergenic | 30.0% | |
| TAACATATACAGGGAATCAA+GGG | - | chr1.4:67044900-67044919 | None:intergenic | 30.0% | |
| TACGATGGAAACAATTTGAT+AGG | - | chr1.4:67044239-67044258 | None:intergenic | 30.0% | |
| TAGTATTATTCGCTAACTGT+TGG | + | chr1.4:67044835-67044854 | MS.gene005227:intron | 30.0% | |
| TCAAATCAGAGGAAAAAGAT+TGG | - | chr1.4:67043366-67043385 | None:intergenic | 30.0% | |
| TCATTGAAAAGGGAAACTTA+GGG | + | chr1.4:67043168-67043187 | MS.gene005227:intron | 30.0% | |
| TCCCATGAATCATTATCATT+TGG | - | chr1.4:67043716-67043735 | None:intergenic | 30.0% | |
| TTAGATGCTTCTGCTTAAAA+TGG | - | chr1.4:67043022-67043041 | None:intergenic | 30.0% | |
| TTATCAATCTCGACAAAGAA+TGG | + | chr1.4:67041205-67041224 | MS.gene005227:CDS | 30.0% | |
| TTCAAATTCAATGTATGGTG+GGG | + | chr1.4:67042017-67042036 | MS.gene005227:intron | 30.0% | |
| TTCAATGACTCTTATTCTCA+TGG | - | chr1.4:67043156-67043175 | None:intergenic | 30.0% | |
| TTTCATCGAAATTGCTTCTT+AGG | - | chr1.4:67043126-67043145 | None:intergenic | 30.0% | |
| ! | AATCAAGCTCTAATCATGTT+TGG | + | chr1.4:67042515-67042534 | MS.gene005227:CDS | 30.0% |
| ! | ACTTGAGCAATATGTTCTTT+TGG | + | chr1.4:67045237-67045256 | MS.gene005227:intron | 30.0% |
| ! | AGAAGTTATTCTAAAGAGAG+GGG | + | chr1.4:67044472-67044491 | MS.gene005227:intron | 30.0% |
| ! | ATCAAGCTCTAATCATGTTT+GGG | + | chr1.4:67042516-67042535 | MS.gene005227:CDS | 30.0% |
| ! | CCCAAATGATAATGATTCAT+GGG | + | chr1.4:67043712-67043731 | MS.gene005227:CDS | 30.0% |
| ! | CTAAATTCAAGTTACCTTAG+GGG | - | chr1.4:67043516-67043535 | None:intergenic | 30.0% |
| ! | CTTTATAACAAGAAGCATAC+TGG | + | chr1.4:67042952-67042971 | MS.gene005227:intron | 30.0% |
| ! | CTTTTTATGTTAGTCACCTA+TGG | + | chr1.4:67042323-67042342 | MS.gene005227:intron | 30.0% |
| ! | GACAACTAAAAGAAAAGTGT+TGG | - | chr1.4:67042083-67042102 | None:intergenic | 30.0% |
| ! | GTCTTTATTTGATGCATGAT+AGG | + | chr1.4:67042437-67042456 | MS.gene005227:intron | 30.0% |
| ! | TCAAAAGTTATTCTAGAGAG+AGG | + | chr1.4:67044859-67044878 | MS.gene005227:intron | 30.0% |
| ! | TCTTTTCTTCTTTAGGTAAC+CGG | + | chr1.4:67043402-67043421 | MS.gene005227:intron | 30.0% |
| ! | TTCTTTCTTTTTCTGTTGAC+TGG | + | chr1.4:67044577-67044596 | MS.gene005227:intron | 30.0% |
| ! | TTTGGAATAATTGTCAGTGA+TGG | + | chr1.4:67044656-67044675 | MS.gene005227:intron | 30.0% |
| !! | AAGAAAAGTGTTGGGTAAAA+AGG | - | chr1.4:67042074-67042093 | None:intergenic | 30.0% |
| !! | CGAGTTTATTTCTAAATCTG+AGG | + | chr1.4:67041481-67041500 | MS.gene005227:CDS | 30.0% |
| !!! | ATTTTGTTTCTGTGTGTGTT+AGG | + | chr1.4:67041442-67041461 | MS.gene005227:intron | 30.0% |
| !!! | CATGTTTGGGCTTAATTTTT+TGG | + | chr1.4:67042529-67042548 | MS.gene005227:CDS | 30.0% |
| !!! | TTTTGTTTCTGTGTGTGTTA+GGG | + | chr1.4:67041443-67041462 | MS.gene005227:intron | 30.0% |
| AAGGACACCTAGATCAATAA+TGG | - | chr1.4:67042676-67042695 | None:intergenic | 35.0% | |
| AAGTGAGGAAATCATTCCTT+TGG | - | chr1.4:67042930-67042949 | None:intergenic | 35.0% | |
| AATCAGAGGAAAAAGATTGG+GGG | - | chr1.4:67043363-67043382 | None:intergenic | 35.0% | |
| ACGTCTTTCTTGATGAAGAA+TGG | - | chr1.4:67042584-67042603 | None:intergenic | 35.0% | |
| AGAATAACTGTCATTGATGG+TGG | + | chr1.4:67045049-67045068 | MS.gene005227:intron | 35.0% | |
| ATTCTGCAGTTAAACTCTGA+TGG | + | chr1.4:67044803-67044822 | MS.gene005227:intron | 35.0% | |
| CAAATTGTTTCCATCGTATC+TGG | + | chr1.4:67044241-67044260 | MS.gene005227:CDS | 35.0% | |
| CATGTCAAAGACATAACAGT+GGG | - | chr1.4:67043910-67043929 | None:intergenic | 35.0% | |
| CCCTGTATATGTTAGAATCT+CGG | + | chr1.4:67044906-67044925 | MS.gene005227:intron | 35.0% | |
| CCGAGATTCTAACATATACA+GGG | - | chr1.4:67044909-67044928 | None:intergenic | 35.0% | |
| CTAACATAAAAAGCTTCAGC+TGG | - | chr1.4:67042316-67042335 | None:intergenic | 35.0% | |
| CTAACATATACAGGGAATCA+AGG | - | chr1.4:67044901-67044920 | None:intergenic | 35.0% | |
| CTTAGAAAAGCTCAAATCAG+AGG | - | chr1.4:67043377-67043396 | None:intergenic | 35.0% | |
| GAAACACAACAATGTTCCAT+AGG | - | chr1.4:67042342-67042361 | None:intergenic | 35.0% | |
| GAATTTCTAATTTACGGGCT+TGG | - | chr1.4:67044369-67044388 | None:intergenic | 35.0% | |
| GAGTAACCAATACAGAAGAT+AGG | - | chr1.4:67044007-67044026 | None:intergenic | 35.0% | |
| GTAGTCTGTACAATTTGAAC+AGG | - | chr1.4:67044347-67044366 | None:intergenic | 35.0% | |
| GTCATTGAAAAGGGAAACTT+AGG | + | chr1.4:67043167-67043186 | MS.gene005227:intron | 35.0% | |
| GTTCACTCCATTATTGATCT+AGG | + | chr1.4:67042666-67042685 | MS.gene005227:intron | 35.0% | |
| TAATGGAGGGAAGATTATGA+AGG | - | chr1.4:67043797-67043816 | None:intergenic | 35.0% | |
| TAGATCATACTTCTTAGCTG+CGG | - | chr1.4:67044281-67044300 | None:intergenic | 35.0% | |
| TCCGAGATTCTAACATATAC+AGG | - | chr1.4:67044910-67044929 | None:intergenic | 35.0% | |
| TGTAAACAGAAGATGAAGAG+AGG | - | chr1.4:67041254-67041273 | None:intergenic | 35.0% | |
| TGTTTCAACTGCAGTAGATA+AGG | + | chr1.4:67042356-67042375 | MS.gene005227:intron | 35.0% | |
| TTAATGCTTACATTCGAGAC+TGG | + | chr1.4:67043276-67043295 | MS.gene005227:intron | 35.0% | |
| TTAGTGCCTATCTTCTGTAT+TGG | + | chr1.4:67043998-67044017 | MS.gene005227:intron | 35.0% | |
| TTCCTTTGGTTAGACATGTT+TGG | - | chr1.4:67043933-67043952 | None:intergenic | 35.0% | |
| ! | AAAGTTATTCTAGAGAGAGG+AGG | + | chr1.4:67044862-67044881 | MS.gene005227:intron | 35.0% |
| ! | AAGTTATTCTAGAGAGAGGA+GGG | + | chr1.4:67044863-67044882 | MS.gene005227:intron | 35.0% |
| ! | AATCTCTTCCGAGTTGAAAA+GGG | + | chr1.4:67041114-67041133 | MS.gene005227:CDS | 35.0% |
| ! | AGAAGTATGATCTAGAAGCA+TGG | + | chr1.4:67044287-67044306 | MS.gene005227:CDS | 35.0% |
| ! | CCCCAAATGATAATGATTCA+TGG | + | chr1.4:67043711-67043730 | MS.gene005227:CDS | 35.0% |
| ! | CTTTTCTTCTTTAGGTAACC+GGG | + | chr1.4:67043403-67043422 | MS.gene005227:intron | 35.0% |
| ! | GAAGTTATTCTAAAGAGAGG+GGG | + | chr1.4:67044473-67044492 | MS.gene005227:intron | 35.0% |
| ! | GAATAACTGTCATTGATGGT+GGG | + | chr1.4:67045050-67045069 | MS.gene005227:intron | 35.0% |
| ! | GAGATTTGGAATGTGATTCT+GGG | + | chr1.4:67041893-67041912 | MS.gene005227:intron | 35.0% |
| ! | TGAGATTTGGAATGTGATTC+TGG | + | chr1.4:67041892-67041911 | MS.gene005227:intron | 35.0% |
| ! | TTTTCTTCTTTAGGTAACCG+GGG | + | chr1.4:67043404-67043423 | MS.gene005227:intron | 35.0% |
| !! | ACAGTAGCTATTTGTTTTCG+TGG | + | chr1.4:67041949-67041968 | MS.gene005227:intron | 35.0% |
| !! | CTCTGATTTGAGCTTTTCTA+AGG | + | chr1.4:67043375-67043394 | MS.gene005227:intron | 35.0% |
| !! | GAGATAGCTGATTTGAAGAA+AGG | + | chr1.4:67041798-67041817 | MS.gene005227:CDS | 35.0% |
| !! | TCCAGCTTCTAAAACATACA+GGG | + | chr1.4:67044312-67044331 | MS.gene005227:CDS | 35.0% |
| !! | TTCCAGCTTCTAAAACATAC+AGG | + | chr1.4:67044311-67044330 | MS.gene005227:CDS | 35.0% |
| !! | TTCTAAAACATACAGGGAGT+TGG | + | chr1.4:67044318-67044337 | MS.gene005227:CDS | 35.0% |
| !!! | CTTAATTTTTTGGCGGAAAG+GGG | + | chr1.4:67042539-67042558 | MS.gene005227:CDS | 35.0% |
| !!! | GCTTAATTTTTTGGCGGAAA+GGG | + | chr1.4:67042538-67042557 | MS.gene005227:CDS | 35.0% |
| !!! | GTTTGGGCTTAATTTTTTGG+CGG | + | chr1.4:67042532-67042551 | MS.gene005227:CDS | 35.0% |
| AAACAGAAGATGAAGAGAGG+AGG | - | chr1.4:67041251-67041270 | None:intergenic | 40.0% | |
| AACCGAACAATGAAGCCAAA+GGG | + | chr1.4:67045512-67045531 | MS.gene005227:CDS | 40.0% | |
| AAGACATGTTAGTGATGCCT+CGG | + | chr1.4:67042712-67042731 | MS.gene005227:intron | 40.0% | |
| AATTCGATACGGACAGAAGA+AGG | + | chr1.4:67044384-67044403 | MS.gene005227:CDS | 40.0% | |
| ACAAACCTCATCATTGCTGA+TGG | - | chr1.4:67041612-67041631 | None:intergenic | 40.0% | |
| ACAACACCTCCATCTCTTAA+TGG | - | chr1.4:67043814-67043833 | None:intergenic | 40.0% | |
| ATACTTATCATCTCCTTCCC+CGG | - | chr1.4:67043424-67043443 | None:intergenic | 40.0% | |
| ATCAGAGGAAAAAGATTGGG+GGG | - | chr1.4:67043362-67043381 | None:intergenic | 40.0% | |
| ATCATGAACGAGGTTACCAA+TGG | - | chr1.4:67041582-67041601 | None:intergenic | 40.0% | |
| ATCTTCCCTCCATTAAGAGA+TGG | + | chr1.4:67043802-67043821 | MS.gene005227:intron | 40.0% | |
| CAAACCTCATCATTGCTGAT+GGG | - | chr1.4:67041611-67041630 | None:intergenic | 40.0% | |
| CAAAGAAGCTATCTTTGTCG+TGG | - | chr1.4:67042878-67042897 | None:intergenic | 40.0% | |
| CATACTAGAGAACAACCAGA+AGG | + | chr1.4:67045417-67045436 | MS.gene005227:CDS | 40.0% | |
| GAGATTCACGGATGATTTCA+GGG | - | chr1.4:67041146-67041165 | None:intergenic | 40.0% | |
| GATTGCTGAAAAAGAGGTTG+AGG | + | chr1.4:67041517-67041536 | MS.gene005227:CDS | 40.0% | |
| GCATGTCAAAGACATAACAG+TGG | - | chr1.4:67043911-67043930 | None:intergenic | 40.0% | |
| GGAAATGCTCAAAAACTCTG+AGG | + | chr1.4:67043745-67043764 | MS.gene005227:CDS | 40.0% | |
| GGAATAATTGTCAGTGATGG+CGG | + | chr1.4:67044659-67044678 | MS.gene005227:intron | 40.0% | |
| GGTAGAGGTTTCTATCTCAA+AGG | + | chr1.4:67042476-67042495 | MS.gene005227:CDS | 40.0% | |
| GGTTTCTATCTCAAAGGAGA+TGG | + | chr1.4:67042482-67042501 | MS.gene005227:CDS | 40.0% | |
| GTGCATATCATTCAGACGAA+TGG | + | chr1.4:67043472-67043491 | MS.gene005227:CDS | 40.0% | |
| GTTCTCTAGTATGCAGCAAA+TGG | - | chr1.4:67045410-67045429 | None:intergenic | 40.0% | |
| TACTTGACAGTGTCCAGATT+CGG | - | chr1.4:67042188-67042207 | None:intergenic | 40.0% | |
| TAGAGATACCAGAAGTCCTT+AGG | + | chr1.4:67045449-67045468 | MS.gene005227:CDS | 40.0% | |
| TATGCTTACTCGCTTGAGTT+TGG | - | chr1.4:67041376-67041395 | None:intergenic | 40.0% | |
| TCCACATGATTCTTGAGCTT+CGG | - | chr1.4:67041762-67041781 | None:intergenic | 40.0% | |
| TCTGAATGATATGCACACAG+AGG | - | chr1.4:67043468-67043487 | None:intergenic | 40.0% | |
| TCTTGCTTTCGTAAAGAAGC+TGG | + | chr1.4:67043614-67043633 | MS.gene005227:CDS | 40.0% | |
| TGAGATTCACGGATGATTTC+AGG | - | chr1.4:67041147-67041166 | None:intergenic | 40.0% | |
| TGCCAAACATGTCTAACCAA+AGG | + | chr1.4:67043928-67043947 | MS.gene005227:intron | 40.0% | |
| TTCCAAACATGAATGGCCTA+AGG | - | chr1.4:67045468-67045487 | None:intergenic | 40.0% | |
| TTTGTTGAACTCCACTCTCA+CGG | + | chr1.4:67045372-67045391 | MS.gene005227:CDS | 40.0% | |
| ! | AATCTTGTTGTCCGAACATG+GGG | + | chr1.4:67041720-67041739 | MS.gene005227:CDS | 40.0% |
| ! | ACAATCTTGTTGTCCGAACA+TGG | + | chr1.4:67041718-67041737 | MS.gene005227:CDS | 40.0% |
| ! | AGTTATTCTAGAGAGAGGAG+GGG | + | chr1.4:67044864-67044883 | MS.gene005227:intron | 40.0% |
| ! | CAATCTCTTCCGAGTTGAAA+AGG | + | chr1.4:67041113-67041132 | MS.gene005227:CDS | 40.0% |
| ! | CAATCTTGTTGTCCGAACAT+GGG | + | chr1.4:67041719-67041738 | MS.gene005227:CDS | 40.0% |
| ! | TAACAAGAAGCATACTGGCA+TGG | + | chr1.4:67042957-67042976 | MS.gene005227:intron | 40.0% |
| ! | TCAATGTATGGTGGGGTTAA+GGG | + | chr1.4:67042024-67042043 | MS.gene005227:intron | 40.0% |
| ! | TTCAATGTATGGTGGGGTTA+AGG | + | chr1.4:67042023-67042042 | MS.gene005227:intron | 40.0% |
| ! | TTCCCTTTGGCTTCATTGTT+CGG | - | chr1.4:67045517-67045536 | None:intergenic | 40.0% |
| ! | TTGTTCGGTTGGTTCTTGAA+TGG | - | chr1.4:67045502-67045521 | None:intergenic | 40.0% |
| !! | GGGAAACTTAGGGCTATTTT+AGG | + | chr1.4:67043178-67043197 | MS.gene005227:intron | 40.0% |
| !!! | CGTGGTAGCTAGTCTTTTTT+TGG | + | chr1.4:67041967-67041986 | MS.gene005227:intron | 40.0% |
| !!! | GGCTTAATTTTTTGGCGGAA+AGG | + | chr1.4:67042537-67042556 | MS.gene005227:CDS | 40.0% |
| !!! | TCCCTGTATGTTTTAGAAGC+TGG | - | chr1.4:67044316-67044335 | None:intergenic | 40.0% |
| AAAAGACCAGTCAGCAGAGA+AGG | - | chr1.4:67044978-67044997 | None:intergenic | 45.0% | |
| AAGAAGCTGGATCTCATGGT+CGG | + | chr1.4:67043627-67043646 | MS.gene005227:CDS | 45.0% | |
| AAGTTACCTTAGGGGTAGAC+GGG | - | chr1.4:67043508-67043527 | None:intergenic | 45.0% | |
| ACACCTCCATCTCTTAATGG+AGG | - | chr1.4:67043811-67043830 | None:intergenic | 45.0% | |
| ACCGAAGCTCAAGAATCATG+TGG | + | chr1.4:67041758-67041777 | MS.gene005227:CDS | 45.0% | |
| ACTAGAGAACAACCAGAAGG+AGG | + | chr1.4:67045420-67045439 | MS.gene005227:CDS | 45.0% | |
| ACTTGACAGTGTCCAGATTC+GGG | - | chr1.4:67042187-67042206 | None:intergenic | 45.0% | |
| AGCCAAAGGGAAGAAATCGA+AGG | + | chr1.4:67045525-67045544 | MS.gene005227:CDS | 45.0% | |
| ATGAATGGCCTAAGGACTTC+TGG | - | chr1.4:67045460-67045479 | None:intergenic | 45.0% | |
| ATGCTTACATTCGAGACTGG+AGG | + | chr1.4:67043279-67043298 | MS.gene005227:intron | 45.0% | |
| ATTCTTCCTTCTCTGCTGAC+TGG | + | chr1.4:67044969-67044988 | MS.gene005227:intron | 45.0% | |
| CAACCGAACAATGAAGCCAA+AGG | + | chr1.4:67045511-67045530 | MS.gene005227:CDS | 45.0% | |
| CAAGTTACCTTAGGGGTAGA+CGG | - | chr1.4:67043509-67043528 | None:intergenic | 45.0% | |
| CACCTCCATCTCTTAATGGA+GGG | - | chr1.4:67043810-67043829 | None:intergenic | 45.0% | |
| CGTAAAGAAGCTGGATCTCA+TGG | + | chr1.4:67043623-67043642 | MS.gene005227:CDS | 45.0% | |
| GCTCTGCAACAGGATAAAAG+AGG | - | chr1.4:67045326-67045345 | None:intergenic | 45.0% | |
| GTCCTTAGGCCATTCATGTT+TGG | + | chr1.4:67045463-67045482 | MS.gene005227:CDS | 45.0% | |
| GTTCAAAGCTCCAGATACGA+TGG | - | chr1.4:67044254-67044273 | None:intergenic | 45.0% | |
| TCTCATGGTCGGGATACTTT+AGG | + | chr1.4:67043638-67043657 | MS.gene005227:CDS | 45.0% | |
| TGAAAAAGAGGTTGAGGCTC+AGG | + | chr1.4:67041523-67041542 | MS.gene005227:CDS | 45.0% | |
| TGATTCATGGGACATGCATG+AGG | + | chr1.4:67043724-67043743 | MS.gene005227:CDS | 45.0% | |
| TGCTTACATTCGAGACTGGA+GGG | + | chr1.4:67043280-67043299 | MS.gene005227:intron | 45.0% | |
| TGGGAACAGAATCATGAACG+AGG | - | chr1.4:67041592-67041611 | None:intergenic | 45.0% | |
| TGTTCCCATCAGCAATGATG+AGG | + | chr1.4:67041604-67041623 | MS.gene005227:CDS | 45.0% | |
| TTCCCTCCATTAAGAGATGG+AGG | + | chr1.4:67043805-67043824 | MS.gene005227:intron | 45.0% | |
| TTGGAATGTGATTCTGGGTC+AGG | + | chr1.4:67041898-67041917 | MS.gene005227:intron | 45.0% | |
| ! | CTCTGAGGACTTCTACAAAG+CGG | + | chr1.4:67043760-67043779 | MS.gene005227:CDS | 45.0% |
| ! | CTCTTTTCTCACCCCATGTT+CGG | - | chr1.4:67041734-67041753 | None:intergenic | 45.0% |
| ! | CTTTGGCTTCATTGTTCGGT+TGG | - | chr1.4:67045513-67045532 | None:intergenic | 45.0% |
| ! | GGTTGTGACCCTTTTCAACT+CGG | - | chr1.4:67041125-67041144 | None:intergenic | 45.0% |
| ! | TGTTTCTGTGTGTGTTAGGG+TGG | + | chr1.4:67041446-67041465 | MS.gene005227:intron | 45.0% |
| !! | AAAAATAAAAAATAAAAAAG+AGG | - | chr1.4:67044087-67044106 | None:intergenic | 5.0% |
| !! | AAAATAAAAAATAAAAAAGA+GGG | - | chr1.4:67044086-67044105 | None:intergenic | 5.0% |
| !!! | TATATTATATAATATAGTTT+TGG | + | chr1.4:67043841-67043860 | MS.gene005227:intron | 5.0% |
| ACCTCTACCTCCAGCAACAT+CGG | - | chr1.4:67042465-67042484 | None:intergenic | 50.0% | |
| ACTGCTCATTGCTCTGCAAC+AGG | - | chr1.4:67045336-67045355 | None:intergenic | 50.0% | |
| AGAAGCTGGATCTCATGGTC+GGG | + | chr1.4:67043628-67043647 | MS.gene005227:CDS | 50.0% | |
| AGCATACTGGCATGGTGCAA+TGG | + | chr1.4:67042965-67042984 | MS.gene005227:intron | 50.0% | |
| AGTGTCCAGATTCGGGATAG+TGG | - | chr1.4:67042180-67042199 | None:intergenic | 50.0% | |
| AGTTCACCAGTTCGAGAAGG+TGG | + | chr1.4:67043670-67043689 | MS.gene005227:CDS | 50.0% | |
| ATACTGGCATGGTGCAATGG+TGG | + | chr1.4:67042968-67042987 | MS.gene005227:intron | 50.0% | |
| ATGATAGGAGCCGATGTTGC+TGG | + | chr1.4:67042452-67042471 | MS.gene005227:intron | 50.0% | |
| CCTTCTCGAACTGGTGAACT+CGG | - | chr1.4:67043670-67043689 | None:intergenic | 50.0% | |
| CTTCTTTAGGTAACCGGGGA+AGG | + | chr1.4:67043408-67043427 | MS.gene005227:intron | 50.0% | |
| GAGAACAACCAGAAGGAGGA+TGG | + | chr1.4:67045424-67045443 | MS.gene005227:CDS | 50.0% | |
| GGCCTTCGATTTCTTCCCTT+TGG | - | chr1.4:67045530-67045549 | None:intergenic | 50.0% | |
| TCTCTACTCCATCCTCCTTC+TGG | - | chr1.4:67045435-67045454 | None:intergenic | 50.0% | |
| TGTGATTCTGGGTCAGGATG+TGG | + | chr1.4:67041904-67041923 | MS.gene005227:intron | 50.0% | |
| TTCGTCAACTACTTCGACGC+TGG | - | chr1.4:67041184-67041203 | None:intergenic | 50.0% | |
| ! | AACGACGGCGTTGAGATTCA+CGG | - | chr1.4:67041158-67041177 | None:intergenic | 50.0% |
| ! | TCGGTTGGTTCTTGAATGGC+AGG | - | chr1.4:67045498-67045517 | None:intergenic | 50.0% |
| !! | CATGCTTGCTGTAGGTATGC+TGG | + | chr1.4:67043584-67043603 | MS.gene005227:intron | 50.0% |
| !! | CTTGGGAACATGCTTGCTGT+AGG | + | chr1.4:67043576-67043595 | MS.gene005227:intron | 50.0% |
| !! | TTGGGCTAGTTGAGCACACT+TGG | - | chr1.4:67042612-67042631 | None:intergenic | 50.0% |
| ACTGCTCCACCTTCTCGAAC+TGG | - | chr1.4:67043679-67043698 | None:intergenic | 55.0% | |
| ATAGGAGCCGATGTTGCTGG+AGG | + | chr1.4:67042455-67042474 | MS.gene005227:intron | 55.0% | |
| ATCCTACCCGTCTACCCCTA+AGG | + | chr1.4:67043499-67043518 | MS.gene005227:CDS | 55.0% | |
| CCACTCTCACGGCTACTGAA+AGG | + | chr1.4:67045383-67045402 | MS.gene005227:CDS | 55.0% | |
| CCGAGTTCACCAGTTCGAGA+AGG | + | chr1.4:67043667-67043686 | MS.gene005227:CDS | 55.0% | |
| CCTTTCAGTAGCCGTGAGAG+TGG | - | chr1.4:67045386-67045405 | None:intergenic | 55.0% | |
| CTTCGACGCTGGCAAAACGA+CGG | - | chr1.4:67041173-67041192 | None:intergenic | 55.0% | |
| TACCTTAGGGGTAGACGGGT+AGG | - | chr1.4:67043504-67043523 | None:intergenic | 55.0% | |
| TTAGGGGTAGACGGGTAGGA+TGG | - | chr1.4:67043500-67043519 | None:intergenic | 55.0% | |
| TTCCGCCACTATCCCGAATC+TGG | + | chr1.4:67042172-67042191 | MS.gene005227:intron | 55.0% | |
| ! | GTCCAGATTCGGGATAGTGG+CGG | - | chr1.4:67042177-67042196 | None:intergenic | 55.0% |
| GCCGATGTTGCTGGAGGTAG+AGG | + | chr1.4:67042461-67042480 | MS.gene005227:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 67041102 | 67045552 | 67041102 | ID=MS.gene005227 |
| chr1.4 | mRNA | 67041102 | 67045552 | 67041102 | ID=MS.gene005227.t1;Parent=MS.gene005227 |
| chr1.4 | exon | 67041102 | 67041234 | 67041102 | ID=MS.gene005227.t1.exon1;Parent=MS.gene005227.t1 |
| chr1.4 | CDS | 67041102 | 67041234 | 67041102 | ID=cds.MS.gene005227.t1;Parent=MS.gene005227.t1 |
| chr1.4 | exon | 67041316 | 67041386 | 67041316 | ID=MS.gene005227.t1.exon2;Parent=MS.gene005227.t1 |
| chr1.4 | CDS | 67041316 | 67041386 | 67041316 | ID=cds.MS.gene005227.t1;Parent=MS.gene005227.t1 |
| chr1.4 | exon | 67041464 | 67041625 | 67041464 | ID=MS.gene005227.t1.exon3;Parent=MS.gene005227.t1 |
| chr1.4 | CDS | 67041464 | 67041625 | 67041464 | ID=cds.MS.gene005227.t1;Parent=MS.gene005227.t1 |
| chr1.4 | exon | 67041714 | 67041819 | 67041714 | ID=MS.gene005227.t1.exon4;Parent=MS.gene005227.t1 |
| chr1.4 | CDS | 67041714 | 67041819 | 67041714 | ID=cds.MS.gene005227.t1;Parent=MS.gene005227.t1 |
| chr1.4 | exon | 67042459 | 67042652 | 67042459 | ID=MS.gene005227.t1.exon5;Parent=MS.gene005227.t1 |
| chr1.4 | CDS | 67042459 | 67042652 | 67042459 | ID=cds.MS.gene005227.t1;Parent=MS.gene005227.t1 |
| chr1.4 | exon | 67043417 | 67043520 | 67043417 | ID=MS.gene005227.t1.exon6;Parent=MS.gene005227.t1 |
| chr1.4 | CDS | 67043417 | 67043520 | 67043417 | ID=cds.MS.gene005227.t1;Parent=MS.gene005227.t1 |
| chr1.4 | exon | 67043598 | 67043781 | 67043598 | ID=MS.gene005227.t1.exon7;Parent=MS.gene005227.t1 |
| chr1.4 | CDS | 67043598 | 67043781 | 67043598 | ID=cds.MS.gene005227.t1;Parent=MS.gene005227.t1 |
| chr1.4 | exon | 67044226 | 67044405 | 67044226 | ID=MS.gene005227.t1.exon8;Parent=MS.gene005227.t1 |
| chr1.4 | CDS | 67044226 | 67044405 | 67044226 | ID=cds.MS.gene005227.t1;Parent=MS.gene005227.t1 |
| chr1.4 | exon | 67045343 | 67045552 | 67045343 | ID=MS.gene005227.t1.exon9;Parent=MS.gene005227.t1 |
| chr1.4 | CDS | 67045343 | 67045552 | 67045343 | ID=cds.MS.gene005227.t1;Parent=MS.gene005227.t1 |
| Gene Sequence |
| Protein sequence |
