Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38588.t1 | XP_003602834.1 | 98 | 445 | 9 | 0 | 430 | 874 | 102 | 546 | 7.30E-253 | 883.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38588.t1 | Q8RWT8 | 73.4 | 443 | 118 | 0 | 431 | 873 | 70 | 512 | 1.9e-193 | 677.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38588.t1 | G7J3Z0 | 98.0 | 445 | 9 | 0 | 430 | 874 | 102 | 546 | 5.3e-253 | 883.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene38588 | 0.854179 | 1.46E-61 | -1.69E-46 |
| MS.gene049171 | MS.gene38588 | 0.849708 | 2.72E-60 | -1.69E-46 |
| MS.gene049173 | MS.gene38588 | 0.835439 | 1.68E-56 | -1.69E-46 |
| MS.gene049217 | MS.gene38588 | 0.853456 | 2.36E-61 | -1.69E-46 |
| MS.gene049222 | MS.gene38588 | 0.884591 | 1.68E-71 | -1.69E-46 |
| MS.gene049232 | MS.gene38588 | 0.823577 | 1.29E-53 | -1.69E-46 |
| MS.gene049285 | MS.gene38588 | 0.842708 | 2.19E-58 | -1.69E-46 |
| MS.gene049320 | MS.gene38588 | 0.824338 | 8.52E-54 | -1.69E-46 |
| MS.gene049427 | MS.gene38588 | 0.84286 | 2.00E-58 | -1.69E-46 |
| MS.gene049609 | MS.gene38588 | 0.876024 | 1.94E-68 | -1.69E-46 |
| MS.gene049627 | MS.gene38588 | 0.826325 | 2.89E-54 | -1.69E-46 |
| MS.gene049633 | MS.gene38588 | 0.828558 | 8.41E-55 | -1.69E-46 |
| MS.gene049805 | MS.gene38588 | 0.873016 | 2.04E-67 | -1.69E-46 |
| MS.gene050163 | MS.gene38588 | 0.821571 | 3.76E-53 | -1.69E-46 |
| MS.gene050333 | MS.gene38588 | 0.810418 | 1.16E-50 | -1.69E-46 |
| MS.gene050380 | MS.gene38588 | -0.826953 | 2.04E-54 | -1.69E-46 |
| MS.gene050381 | MS.gene38588 | -0.801534 | 8.60E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene38588 | 0.829713 | 4.41E-55 | -1.69E-46 |
| MS.gene050518 | MS.gene38588 | 0.805018 | 1.63E-49 | -1.69E-46 |
| MS.gene050538 | MS.gene38588 | 0.822201 | 2.69E-53 | -1.69E-46 |
| MS.gene050577 | MS.gene38588 | 0.829218 | 5.82E-55 | -1.69E-46 |
| MS.gene050593 | MS.gene38588 | 0.842535 | 2.44E-58 | -1.69E-46 |
| MS.gene050625 | MS.gene38588 | 0.811126 | 8.18E-51 | -1.69E-46 |
| MS.gene050670 | MS.gene38588 | 0.805717 | 1.17E-49 | -1.69E-46 |
| MS.gene050699 | MS.gene38588 | 0.810231 | 1.28E-50 | -1.69E-46 |
| MS.gene050747 | MS.gene38588 | 0.907747 | 3.63E-81 | -1.69E-46 |
| MS.gene050772 | MS.gene38588 | 0.871087 | 8.93E-67 | -1.69E-46 |
| MS.gene05080 | MS.gene38588 | 0.842478 | 2.52E-58 | -1.69E-46 |
| MS.gene05081 | MS.gene38588 | 0.809879 | 1.52E-50 | -1.69E-46 |
| MS.gene050868 | MS.gene38588 | 0.823641 | 1.24E-53 | -1.69E-46 |
| MS.gene050871 | MS.gene38588 | 0.82376 | 1.16E-53 | -1.69E-46 |
| MS.gene050950 | MS.gene38588 | 0.894422 | 2.50E-75 | -1.69E-46 |
| MS.gene05100 | MS.gene38588 | 0.830798 | 2.40E-55 | -1.69E-46 |
| MS.gene05105 | MS.gene38588 | 0.826247 | 3.01E-54 | -1.69E-46 |
| MS.gene051167 | MS.gene38588 | -0.805355 | 1.39E-49 | -1.69E-46 |
| MS.gene051387 | MS.gene38588 | 0.857965 | 1.14E-62 | -1.69E-46 |
| MS.gene051551 | MS.gene38588 | 0.813295 | 2.75E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene38588 | 0.879702 | 1.00E-69 | -1.69E-46 |
| MS.gene051692 | MS.gene38588 | 0.827748 | 1.32E-54 | -1.69E-46 |
| MS.gene051694 | MS.gene38588 | 0.870972 | 9.74E-67 | -1.69E-46 |
| MS.gene051734 | MS.gene38588 | 0.812732 | 3.66E-51 | -1.69E-46 |
| MS.gene051838 | MS.gene38588 | 0.851433 | 8.90E-61 | -1.69E-46 |
| MS.gene051858 | MS.gene38588 | 0.854204 | 1.44E-61 | -1.69E-46 |
| MS.gene052164 | MS.gene38588 | 0.877101 | 8.23E-69 | -1.69E-46 |
| MS.gene052322 | MS.gene38588 | 0.80152 | 8.66E-49 | -1.69E-46 |
| MS.gene052346 | MS.gene38588 | 0.802552 | 5.31E-49 | -1.69E-46 |
| MS.gene05234 | MS.gene38588 | -0.805231 | 1.48E-49 | -1.69E-46 |
| MS.gene052379 | MS.gene38588 | 0.814179 | 1.76E-51 | -1.69E-46 |
| MS.gene052414 | MS.gene38588 | 0.830647 | 2.61E-55 | -1.69E-46 |
| MS.gene052421 | MS.gene38588 | 0.849435 | 3.24E-60 | -1.69E-46 |
| MS.gene052481 | MS.gene38588 | 0.844424 | 7.62E-59 | -1.69E-46 |
| MS.gene052482 | MS.gene38588 | 0.818112 | 2.32E-52 | -1.69E-46 |
| MS.gene052484 | MS.gene38588 | 0.844418 | 7.65E-59 | -1.69E-46 |
| MS.gene052486 | MS.gene38588 | 0.83012 | 3.51E-55 | -1.69E-46 |
| MS.gene052501 | MS.gene38588 | 0.865565 | 5.38E-65 | -1.69E-46 |
| MS.gene052503 | MS.gene38588 | 0.867083 | 1.78E-65 | -1.69E-46 |
| MS.gene052505 | MS.gene38588 | 0.857298 | 1.80E-62 | -1.69E-46 |
| MS.gene052506 | MS.gene38588 | 0.808887 | 2.48E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene38588 | 0.872372 | 3.35E-67 | -1.69E-46 |
| MS.gene052670 | MS.gene38588 | 0.823826 | 1.12E-53 | -1.69E-46 |
| MS.gene052823 | MS.gene38588 | 0.860083 | 2.64E-63 | -1.69E-46 |
| MS.gene052825 | MS.gene38588 | 0.862298 | 5.59E-64 | -1.69E-46 |
| MS.gene052916 | MS.gene38588 | 0.8015 | 8.75E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene38588 | 0.820167 | 7.91E-53 | -1.69E-46 |
| MS.gene052982 | MS.gene38588 | 0.854514 | 1.17E-61 | -1.69E-46 |
| MS.gene053103 | MS.gene38588 | 0.825444 | 4.67E-54 | -1.69E-46 |
| MS.gene053104 | MS.gene38588 | 0.822081 | 2.87E-53 | -1.69E-46 |
| MS.gene053203 | MS.gene38588 | 0.858923 | 5.90E-63 | -1.69E-46 |
| MS.gene053207 | MS.gene38588 | 0.869931 | 2.14E-66 | -1.69E-46 |
| MS.gene053213 | MS.gene38588 | 0.869323 | 3.38E-66 | -1.69E-46 |
| MS.gene053286 | MS.gene38588 | 0.861718 | 8.43E-64 | -1.69E-46 |
| MS.gene053322 | MS.gene38588 | 0.834949 | 2.23E-56 | -1.69E-46 |
| MS.gene053436 | MS.gene38588 | 0.859966 | 2.87E-63 | -1.69E-46 |
| MS.gene053480 | MS.gene38588 | 0.807429 | 5.08E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene38588 | 0.882844 | 7.41E-71 | -1.69E-46 |
| MS.gene053579 | MS.gene38588 | 0.801983 | 6.96E-49 | -1.69E-46 |
| MS.gene053626 | MS.gene38588 | 0.869125 | 3.91E-66 | -1.69E-46 |
| MS.gene053632 | MS.gene38588 | 0.868909 | 4.60E-66 | -1.69E-46 |
| MS.gene053824 | MS.gene38588 | 0.837903 | 3.95E-57 | -1.69E-46 |
| MS.gene053912 | MS.gene38588 | 0.82802 | 1.13E-54 | -1.69E-46 |
| MS.gene053916 | MS.gene38588 | 0.805892 | 1.07E-49 | -1.69E-46 |
| MS.gene054003 | MS.gene38588 | 0.84381 | 1.11E-58 | -1.69E-46 |
| MS.gene054408 | MS.gene38588 | 0.850723 | 1.41E-60 | -1.69E-46 |
| MS.gene054595 | MS.gene38588 | 0.851577 | 8.11E-61 | -1.69E-46 |
| MS.gene054600 | MS.gene38588 | 0.843034 | 1.80E-58 | -1.69E-46 |
| MS.gene054642 | MS.gene38588 | 0.84229 | 2.83E-58 | -1.69E-46 |
| MS.gene05470 | MS.gene38588 | 0.808403 | 3.15E-50 | -1.69E-46 |
| MS.gene054927 | MS.gene38588 | 0.903938 | 2.07E-79 | -1.69E-46 |
| MS.gene054954 | MS.gene38588 | 0.814441 | 1.54E-51 | -1.69E-46 |
| MS.gene05505 | MS.gene38588 | 0.857219 | 1.89E-62 | -1.69E-46 |
| MS.gene055206 | MS.gene38588 | 0.850922 | 1.24E-60 | -1.69E-46 |
| MS.gene055212 | MS.gene38588 | 0.809587 | 1.76E-50 | -1.69E-46 |
| MS.gene055289 | MS.gene38588 | 0.827341 | 1.65E-54 | -1.69E-46 |
| MS.gene055362 | MS.gene38588 | 0.838371 | 2.99E-57 | -1.69E-46 |
| MS.gene055486 | MS.gene38588 | 0.894187 | 3.12E-75 | -1.69E-46 |
| MS.gene055502 | MS.gene38588 | 0.865842 | 4.40E-65 | -1.69E-46 |
| MS.gene055577 | MS.gene38588 | 0.853512 | 2.28E-61 | -1.69E-46 |
| MS.gene055647 | MS.gene38588 | 0.81919 | 1.32E-52 | -1.69E-46 |
| MS.gene055722 | MS.gene38588 | 0.874328 | 7.36E-68 | -1.69E-46 |
| MS.gene05589 | MS.gene38588 | 0.804716 | 1.89E-49 | -1.69E-46 |
| MS.gene055941 | MS.gene38588 | 0.842017 | 3.34E-58 | -1.69E-46 |
| MS.gene056040 | MS.gene38588 | 0.837724 | 4.39E-57 | -1.69E-46 |
| MS.gene056083 | MS.gene38588 | 0.863688 | 2.08E-64 | -1.69E-46 |
| MS.gene056166 | MS.gene38588 | 0.87368 | 1.22E-67 | -1.69E-46 |
| MS.gene056374 | MS.gene38588 | 0.830033 | 3.69E-55 | -1.69E-46 |
| MS.gene056409 | MS.gene38588 | 0.82992 | 3.93E-55 | -1.69E-46 |
| MS.gene056448 | MS.gene38588 | 0.849261 | 3.62E-60 | -1.69E-46 |
| MS.gene056487 | MS.gene38588 | 0.811509 | 6.76E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene38588 | 0.814234 | 1.71E-51 | -1.69E-46 |
| MS.gene056510 | MS.gene38588 | 0.834376 | 3.11E-56 | -1.69E-46 |
| MS.gene056511 | MS.gene38588 | 0.838942 | 2.13E-57 | -1.69E-46 |
| MS.gene056549 | MS.gene38588 | 0.811808 | 5.82E-51 | -1.69E-46 |
| MS.gene056610 | MS.gene38588 | 0.832767 | 7.83E-56 | -1.69E-46 |
| MS.gene056657 | MS.gene38588 | 0.839601 | 1.44E-57 | -1.69E-46 |
| MS.gene056692 | MS.gene38588 | 0.821371 | 4.18E-53 | -1.69E-46 |
| MS.gene057011 | MS.gene38588 | 0.834021 | 3.81E-56 | -1.69E-46 |
| MS.gene057048 | MS.gene38588 | 0.840523 | 8.26E-58 | -1.69E-46 |
| MS.gene057076 | MS.gene38588 | 0.821372 | 4.18E-53 | -1.69E-46 |
| MS.gene057129 | MS.gene38588 | 0.804848 | 1.77E-49 | -1.69E-46 |
| MS.gene057146 | MS.gene38588 | 0.882145 | 1.33E-70 | -1.69E-46 |
| MS.gene057310 | MS.gene38588 | 0.803282 | 3.76E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene38588 | 0.800234 | 1.59E-48 | -1.69E-46 |
| MS.gene057416 | MS.gene38588 | 0.874105 | 8.76E-68 | -1.69E-46 |
| MS.gene057658 | MS.gene38588 | 0.838057 | 3.61E-57 | -1.69E-46 |
| MS.gene057734 | MS.gene38588 | 0.844217 | 8.67E-59 | -1.69E-46 |
| MS.gene057831 | MS.gene38588 | 0.830029 | 3.70E-55 | -1.69E-46 |
| MS.gene057856 | MS.gene38588 | 0.839763 | 1.30E-57 | -1.69E-46 |
| MS.gene057857 | MS.gene38588 | 0.802884 | 4.54E-49 | -1.69E-46 |
| MS.gene05787 | MS.gene38588 | 0.805488 | 1.30E-49 | -1.69E-46 |
| MS.gene058019 | MS.gene38588 | 0.843861 | 1.08E-58 | -1.69E-46 |
| MS.gene058130 | MS.gene38588 | 0.819586 | 1.07E-52 | -1.69E-46 |
| MS.gene058157 | MS.gene38588 | 0.824399 | 8.24E-54 | -1.69E-46 |
| MS.gene058338 | MS.gene38588 | 0.833116 | 6.41E-56 | -1.69E-46 |
| MS.gene058376 | MS.gene38588 | 0.84475 | 6.23E-59 | -1.69E-46 |
| MS.gene05837 | MS.gene38588 | 0.828077 | 1.10E-54 | -1.69E-46 |
| MS.gene058419 | MS.gene38588 | 0.848552 | 5.70E-60 | -1.69E-46 |
| MS.gene058444 | MS.gene38588 | 0.82705 | 1.94E-54 | -1.69E-46 |
| MS.gene058544 | MS.gene38588 | 0.858444 | 8.20E-63 | -1.69E-46 |
| MS.gene058700 | MS.gene38588 | 0.812678 | 3.76E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene38588 | 0.827555 | 1.47E-54 | -1.69E-46 |
| MS.gene058838 | MS.gene38588 | 0.851723 | 7.37E-61 | -1.69E-46 |
| MS.gene05883 | MS.gene38588 | 0.863703 | 2.06E-64 | -1.69E-46 |
| MS.gene059022 | MS.gene38588 | 0.822156 | 2.75E-53 | -1.69E-46 |
| MS.gene059023 | MS.gene38588 | 0.844207 | 8.72E-59 | -1.69E-46 |
| MS.gene059029 | MS.gene38588 | 0.817807 | 2.72E-52 | -1.69E-46 |
| MS.gene05913 | MS.gene38588 | 0.802278 | 6.05E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene38588 | 0.845834 | 3.17E-59 | -1.69E-46 |
| MS.gene059367 | MS.gene38588 | 0.833734 | 4.50E-56 | -1.69E-46 |
| MS.gene059368 | MS.gene38588 | 0.823034 | 1.72E-53 | -1.69E-46 |
| MS.gene059455 | MS.gene38588 | 0.829011 | 6.53E-55 | -1.69E-46 |
| MS.gene059536 | MS.gene38588 | 0.875822 | 2.28E-68 | -1.69E-46 |
| MS.gene059667 | MS.gene38588 | 0.828012 | 1.14E-54 | -1.69E-46 |
| MS.gene059677 | MS.gene38588 | 0.825365 | 4.88E-54 | -1.69E-46 |
| MS.gene059688 | MS.gene38588 | 0.809611 | 1.74E-50 | -1.69E-46 |
| MS.gene059711 | MS.gene38588 | 0.811307 | 7.48E-51 | -1.69E-46 |
| MS.gene059718 | MS.gene38588 | 0.884856 | 1.34E-71 | -1.69E-46 |
| MS.gene059756 | MS.gene38588 | 0.8233 | 1.49E-53 | -1.69E-46 |
| MS.gene059801 | MS.gene38588 | 0.855466 | 6.19E-62 | -1.69E-46 |
| MS.gene059865 | MS.gene38588 | 0.809606 | 1.74E-50 | -1.69E-46 |
| MS.gene059902 | MS.gene38588 | 0.855718 | 5.23E-62 | -1.69E-46 |
| MS.gene059960 | MS.gene38588 | 0.801454 | 8.94E-49 | -1.69E-46 |
| MS.gene060403 | MS.gene38588 | 0.809355 | 1.97E-50 | -1.69E-46 |
| MS.gene060482 | MS.gene38588 | 0.863009 | 3.38E-64 | -1.69E-46 |
| MS.gene060485 | MS.gene38588 | 0.810897 | 9.17E-51 | -1.69E-46 |
| MS.gene060762 | MS.gene38588 | 0.850307 | 1.85E-60 | -1.69E-46 |
| MS.gene06077 | MS.gene38588 | 0.83263 | 8.47E-56 | -1.69E-46 |
| MS.gene060804 | MS.gene38588 | 0.847854 | 8.88E-60 | -1.69E-46 |
| MS.gene060818 | MS.gene38588 | 0.82127 | 4.41E-53 | -1.69E-46 |
| MS.gene060835 | MS.gene38588 | 0.838152 | 3.41E-57 | -1.69E-46 |
| MS.gene060837 | MS.gene38588 | 0.86089 | 1.51E-63 | -1.69E-46 |
| MS.gene06092 | MS.gene38588 | 0.857801 | 1.27E-62 | -1.69E-46 |
| MS.gene061041 | MS.gene38588 | 0.823 | 1.75E-53 | -1.69E-46 |
| MS.gene061150 | MS.gene38588 | 0.85219 | 5.43E-61 | -1.69E-46 |
| MS.gene061171 | MS.gene38588 | 0.808256 | 3.39E-50 | -1.69E-46 |
| MS.gene061200 | MS.gene38588 | 0.839693 | 1.36E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene38588 | MS.gene055573 | PPI |
| MS.gene38588 | MS.gene005227 | PPI |
| MS.gene38588 | MS.gene44095 | PPI |
| MS.gene38588 | MS.gene056036 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38588.t1 | MTR_3g099470 | 97.978 | 445 | 9 | 0 | 430 | 874 | 102 | 546 | 0.0 | 914 |
| MS.gene38588.t1 | MTR_3g099460 | 96.859 | 382 | 11 | 1 | 51 | 431 | 1 | 382 | 0.0 | 755 |
| MS.gene38588.t1 | MTR_3g099470 | 97.746 | 355 | 8 | 0 | 430 | 784 | 102 | 456 | 0.0 | 726 |
| MS.gene38588.t1 | MTR_3g099460 | 95.026 | 382 | 11 | 2 | 51 | 431 | 1 | 375 | 0.0 | 706 |
| MS.gene38588.t1 | MTR_3g099460 | 96.238 | 319 | 11 | 1 | 114 | 431 | 1 | 319 | 0.0 | 595 |
| MS.gene38588.t1 | MTR_3g099460 | 96.321 | 299 | 10 | 1 | 51 | 348 | 1 | 299 | 0.0 | 561 |
| MS.gene38588.t1 | MTR_3g099460 | 93.980 | 299 | 10 | 2 | 51 | 348 | 1 | 292 | 0.0 | 540 |
| MS.gene38588.t1 | MTR_5g087710 | 61.475 | 366 | 138 | 2 | 66 | 430 | 18 | 381 | 1.42e-160 | 474 |
| MS.gene38588.t1 | MTR_3g079180 | 58.730 | 378 | 153 | 2 | 54 | 430 | 1 | 376 | 5.10e-156 | 462 |
| MS.gene38588.t1 | MTR_3g089940 | 49.730 | 370 | 181 | 4 | 63 | 431 | 6 | 371 | 7.09e-118 | 363 |
| MS.gene38588.t1 | MTR_3g089977 | 49.189 | 370 | 183 | 4 | 63 | 431 | 6 | 371 | 1.73e-117 | 362 |
| MS.gene38588.t1 | MTR_3g089940 | 49.591 | 367 | 180 | 4 | 66 | 431 | 9 | 371 | 8.55e-117 | 360 |
| MS.gene38588.t1 | MTR_7g068330 | 51.064 | 376 | 176 | 6 | 60 | 431 | 7 | 378 | 1.16e-116 | 360 |
| MS.gene38588.t1 | MTR_6g068930 | 50.959 | 365 | 172 | 3 | 66 | 430 | 10 | 367 | 4.02e-114 | 353 |
| MS.gene38588.t1 | MTR_3g089970 | 48.649 | 370 | 185 | 4 | 63 | 431 | 7 | 372 | 5.86e-114 | 353 |
| MS.gene38588.t1 | MTR_7g068320 | 51.604 | 374 | 172 | 7 | 63 | 431 | 17 | 386 | 1.26e-113 | 353 |
| MS.gene38588.t1 | MTR_7g099040 | 47.154 | 369 | 190 | 4 | 63 | 430 | 7 | 371 | 2.79e-113 | 351 |
| MS.gene38588.t1 | MTR_1g069430 | 47.554 | 368 | 188 | 4 | 63 | 429 | 5 | 368 | 3.67e-113 | 351 |
| MS.gene38588.t1 | MTR_3g089940 | 49.558 | 339 | 166 | 4 | 63 | 400 | 6 | 340 | 1.57e-104 | 327 |
| MS.gene38588.t1 | MTR_3g089940 | 49.405 | 336 | 165 | 4 | 66 | 400 | 9 | 340 | 1.50e-103 | 325 |
| MS.gene38588.t1 | MTR_3g079170 | 56.089 | 271 | 104 | 2 | 160 | 429 | 25 | 281 | 4.32e-102 | 318 |
| MS.gene38588.t1 | MTR_5g045710 | 46.322 | 367 | 183 | 7 | 66 | 428 | 8 | 364 | 1.44e-100 | 318 |
| MS.gene38588.t1 | MTR_0001s0660 | 44.780 | 364 | 188 | 7 | 66 | 426 | 8 | 361 | 8.92e-100 | 319 |
| MS.gene38588.t1 | MTR_1g082850 | 36.041 | 394 | 228 | 9 | 478 | 866 | 52 | 426 | 4.53e-71 | 241 |
| MS.gene38588.t1 | MTR_5g045710 | 44.792 | 288 | 148 | 6 | 145 | 428 | 1 | 281 | 1.13e-70 | 235 |
| MS.gene38588.t1 | MTR_8g095220 | 29.443 | 377 | 249 | 10 | 62 | 430 | 48 | 415 | 5.98e-34 | 135 |
| MS.gene38588.t1 | MTR_8g095220 | 30.040 | 253 | 166 | 5 | 62 | 307 | 48 | 296 | 9.78e-26 | 109 |
| MS.gene38588.t1 | MTR_6g465010 | 25.648 | 347 | 212 | 12 | 94 | 429 | 25 | 336 | 3.58e-21 | 96.3 |
| MS.gene38588.t1 | MTR_6g466320 | 25.648 | 347 | 212 | 12 | 94 | 429 | 41 | 352 | 5.70e-21 | 96.3 |
| MS.gene38588.t1 | MTR_6g465010 | 25.648 | 347 | 212 | 12 | 94 | 429 | 41 | 352 | 5.70e-21 | 96.3 |
| MS.gene38588.t1 | MTR_7g029025 | 35.333 | 150 | 64 | 5 | 719 | 866 | 123 | 241 | 3.34e-16 | 80.9 |
| MS.gene38588.t1 | MTR_5g031300 | 27.385 | 325 | 173 | 14 | 94 | 399 | 40 | 320 | 2.86e-13 | 72.8 |
| MS.gene38588.t1 | MTR_4g115300 | 26.190 | 378 | 201 | 17 | 94 | 452 | 39 | 357 | 4.83e-12 | 68.9 |
| MS.gene38588.t1 | MTR_5g031360 | 26.791 | 321 | 180 | 12 | 94 | 399 | 41 | 321 | 5.55e-12 | 68.9 |
| MS.gene38588.t1 | MTR_1g025950 | 33.562 | 146 | 79 | 6 | 94 | 238 | 38 | 166 | 1.84e-11 | 67.0 |
| MS.gene38588.t1 | MTR_8g092630 | 26.984 | 315 | 172 | 10 | 94 | 392 | 96 | 368 | 7.26e-11 | 65.9 |
| MS.gene38588.t1 | MTR_8g068190 | 30.667 | 150 | 78 | 5 | 94 | 238 | 39 | 167 | 7.35e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38588.t1 | AT1G11870 | 70.955 | 513 | 131 | 4 | 364 | 873 | 13 | 510 | 0.0 | 738 |
| MS.gene38588.t1 | AT1G11870 | 70.760 | 513 | 134 | 4 | 364 | 873 | 13 | 512 | 0.0 | 737 |
| MS.gene38588.t1 | AT1G11870 | 80.423 | 378 | 74 | 0 | 496 | 873 | 1 | 378 | 0.0 | 640 |
| MS.gene38588.t1 | AT1G11870 | 67.580 | 438 | 124 | 5 | 364 | 796 | 13 | 437 | 0.0 | 592 |
| MS.gene38588.t1 | AT1G11870 | 68.372 | 430 | 120 | 4 | 364 | 790 | 13 | 429 | 0.0 | 592 |
| MS.gene38588.t1 | AT1G11870 | 66.667 | 399 | 117 | 4 | 364 | 759 | 13 | 398 | 0.0 | 529 |
| MS.gene38588.t1 | AT1G22430 | 65.135 | 370 | 127 | 2 | 63 | 431 | 11 | 379 | 4.77e-175 | 511 |
| MS.gene38588.t1 | AT1G22430 | 65.135 | 370 | 127 | 2 | 63 | 431 | 11 | 379 | 4.77e-175 | 511 |
| MS.gene38588.t1 | AT1G22440 | 65.135 | 370 | 127 | 2 | 63 | 431 | 9 | 377 | 3.22e-173 | 506 |
| MS.gene38588.t1 | AT4G22110 | 64.054 | 370 | 131 | 2 | 63 | 431 | 12 | 380 | 6.28e-171 | 501 |
| MS.gene38588.t1 | AT4G22110 | 64.054 | 370 | 131 | 2 | 63 | 431 | 12 | 380 | 6.28e-171 | 501 |
| MS.gene38588.t1 | AT5G42250 | 60.705 | 369 | 141 | 3 | 64 | 430 | 15 | 381 | 8.04e-159 | 469 |
| MS.gene38588.t1 | AT1G22430 | 67.483 | 286 | 91 | 2 | 63 | 347 | 11 | 295 | 1.75e-136 | 409 |
| MS.gene38588.t1 | AT1G64710 | 51.064 | 376 | 176 | 6 | 60 | 431 | 2 | 373 | 2.39e-121 | 372 |
| MS.gene38588.t1 | AT1G22430 | 65.900 | 261 | 87 | 2 | 63 | 322 | 11 | 270 | 3.84e-120 | 366 |
| MS.gene38588.t1 | AT1G22430 | 65.900 | 261 | 87 | 2 | 63 | 322 | 11 | 270 | 3.84e-120 | 366 |
| MS.gene38588.t1 | AT1G77120 | 50.541 | 370 | 178 | 4 | 63 | 431 | 5 | 370 | 8.65e-120 | 368 |
| MS.gene38588.t1 | AT1G32780 | 49.081 | 381 | 183 | 4 | 60 | 431 | 3 | 381 | 1.39e-115 | 358 |
| MS.gene38588.t1 | AT4G22110 | 66.016 | 256 | 85 | 2 | 63 | 317 | 12 | 266 | 8.84e-115 | 351 |
| MS.gene38588.t1 | AT5G43940 | 48.098 | 368 | 186 | 4 | 63 | 429 | 5 | 368 | 1.49e-113 | 352 |
| MS.gene38588.t1 | AT5G24760 | 50.273 | 366 | 173 | 5 | 66 | 430 | 14 | 371 | 1.53e-113 | 352 |
| MS.gene38588.t1 | AT1G64710 | 50.565 | 354 | 167 | 6 | 82 | 431 | 1 | 350 | 5.48e-113 | 350 |
| MS.gene38588.t1 | AT5G43940 | 47.645 | 361 | 184 | 4 | 70 | 429 | 24 | 380 | 1.03e-109 | 342 |
| MS.gene38588.t1 | AT5G24760 | 50.000 | 350 | 166 | 5 | 82 | 430 | 1 | 342 | 1.89e-106 | 332 |
| MS.gene38588.t1 | AT5G24760 | 50.000 | 350 | 166 | 5 | 82 | 430 | 1 | 342 | 1.89e-106 | 332 |
| MS.gene38588.t1 | AT1G64710 | 49.669 | 302 | 145 | 5 | 134 | 431 | 6 | 304 | 6.02e-90 | 288 |
| MS.gene38588.t1 | AT5G27470 | 36.869 | 396 | 230 | 8 | 479 | 866 | 46 | 429 | 4.72e-75 | 253 |
| MS.gene38588.t1 | AT5G24760 | 50.806 | 248 | 118 | 4 | 184 | 430 | 13 | 257 | 6.39e-72 | 238 |
| MS.gene38588.t1 | AT5G63620 | 28.455 | 369 | 249 | 8 | 69 | 430 | 57 | 417 | 5.95e-34 | 136 |
| MS.gene38588.t1 | AT5G63620 | 28.455 | 369 | 249 | 8 | 69 | 430 | 57 | 417 | 6.91e-34 | 135 |
| MS.gene38588.t1 | AT5G63620 | 28.980 | 245 | 165 | 4 | 69 | 307 | 57 | 298 | 9.80e-25 | 106 |
| MS.gene38588.t1 | AT5G51970 | 24.713 | 348 | 218 | 12 | 94 | 431 | 43 | 356 | 6.20e-20 | 93.2 |
| MS.gene38588.t1 | AT5G51970 | 24.713 | 348 | 218 | 12 | 94 | 431 | 43 | 356 | 6.20e-20 | 93.2 |
| MS.gene38588.t1 | AT4G37970 | 22.997 | 387 | 208 | 14 | 94 | 455 | 40 | 361 | 1.01e-11 | 68.2 |
| MS.gene38588.t1 | AT4G37970 | 27.004 | 237 | 133 | 7 | 94 | 307 | 40 | 259 | 5.39e-11 | 65.1 |
| MS.gene38588.t1 | AT4G37980 | 25.402 | 311 | 197 | 12 | 94 | 399 | 35 | 315 | 9.53e-11 | 65.1 |
Find 213 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATACCTTTGCATCTTAT+TGG | 0.127700 | 3.3:-81825822 | None:intergenic |
| CCGCAATTCTGATGCTAATT+TGG | 0.142845 | 3.3:+81837918 | MS.gene38588:CDS |
| TGGTAATAATCACTCTCTTC+TGG | 0.211142 | 3.3:-81841962 | None:intergenic |
| AGCAACAATTGCACAAAGTT+TGG | 0.228530 | 3.3:+81826573 | MS.gene38588:CDS |
| TTGACAGGAAAACTAAATTT+AGG | 0.239752 | 3.3:-81839057 | None:intergenic |
| GCTTCGTGTCCTAAAATTCT+TGG | 0.241983 | 3.3:-81826218 | None:intergenic |
| ACAGAGGACCGTACAATTTC+AGG | 0.244895 | 3.3:-81841252 | None:intergenic |
| AATCAGGACAAATTTGAAAT+AGG | 0.247521 | 3.3:+81833691 | MS.gene38588:CDS |
| AGAAGTGGTGCACCATTTAT+TGG | 0.249121 | 3.3:+81826656 | MS.gene38588:CDS |
| ATTCGTACTTCCCATGATTT+AGG | 0.257153 | 3.3:-81825985 | None:intergenic |
| CGATATGTTTGATCCGTTTC+CGG | 0.257550 | 3.3:-81823884 | None:intergenic |
| AGTCCTTATGACATTCTAAA+AGG | 0.258635 | 3.3:+81834441 | MS.gene38588:CDS |
| CATAGGCTTGGCATCCTTAA+TGG | 0.268660 | 3.3:+81834186 | MS.gene38588:CDS |
| GAGATGGAACAAGCAGGTTT+AGG | 0.280140 | 3.3:+81826622 | MS.gene38588:CDS |
| AGGAGGGGAAGATCAGATTT+TGG | 0.284829 | 3.3:-81834501 | None:intergenic |
| ACCATCACCGGATCACTATT+TGG | 0.287066 | 3.3:+81834468 | MS.gene38588:CDS |
| ATTGAAGAAGACTCTCAATT+TGG | 0.288093 | 3.3:-81825740 | None:intergenic |
| AGCTACTAACACCCAATAAA+TGG | 0.291135 | 3.3:-81826668 | None:intergenic |
| GCCTCAATGGCTCCGGAATA+AGG | 0.294083 | 3.3:-81844177 | None:intergenic |
| ATTAAAAGCCTCTGCCATTA+AGG | 0.295223 | 3.3:-81834200 | None:intergenic |
| TCATACACAGGAAAACAATT+TGG | 0.296006 | 3.3:+81833825 | MS.gene38588:intron |
| GCTTACAAATTTGTCGTTGC+AGG | 0.303899 | 3.3:-81833874 | None:intergenic |
| GCCACTCTGATGTCACCTTT+TGG | 0.310711 | 3.3:+81826031 | MS.gene38588:CDS |
| TCTTCAATCTTCATCATTTG+TGG | 0.325167 | 3.3:+81825755 | MS.gene38588:CDS |
| TTTCTGCAGAACTTTGGATA+TGG | 0.351141 | 3.3:+81842120 | MS.gene38588:intron |
| GACAGTGACCAATGCCTTAT+CGG | 0.354411 | 3.3:+81841551 | MS.gene38588:CDS |
| TCTATGCATTCACCACAGTT+TGG | 0.364954 | 3.3:-81826534 | None:intergenic |
| GACCTTGTTCAGTTAGTGTT+TGG | 0.373400 | 3.3:-81838650 | None:intergenic |
| AGATGGAACAAGCAGGTTTA+GGG | 0.374578 | 3.3:+81826623 | MS.gene38588:CDS |
| GATCCGTTTCCGGCGGCTCC+AGG | 0.380596 | 3.3:-81823874 | None:intergenic |
| GCAACAATTGCACAAAGTTT+GGG | 0.381600 | 3.3:+81826574 | MS.gene38588:CDS |
| AGAGCCGTCGATTGGGAATC+CGG | 0.381628 | 3.3:+81843999 | MS.gene38588:CDS |
| TAGAGATGGCTCTTCTCAAT+TGG | 0.383510 | 3.3:+81841184 | MS.gene38588:CDS |
| AACCTGCTTGTTCCATCTCT+TGG | 0.385296 | 3.3:-81826618 | None:intergenic |
| CTATGCATTCACCACAGTTT+GGG | 0.391708 | 3.3:-81826533 | None:intergenic |
| GATATGGCCTCCGAAGATTT+AGG | 0.392610 | 3.3:+81842136 | MS.gene38588:CDS |
| GAAGTGGTGCACCATTTATT+GGG | 0.395014 | 3.3:+81826657 | MS.gene38588:CDS |
| CGAGGAGCTTCAAAGATTAT+AGG | 0.397391 | 3.3:+81833658 | MS.gene38588:CDS |
| GGTAATAATCACTCTCTTCT+GGG | 0.410820 | 3.3:-81841961 | None:intergenic |
| ACAATTTCAGGTGTTGTTAG+TGG | 0.411237 | 3.3:-81841240 | None:intergenic |
| TTTGTATCCTTGCAGGGATA+GGG | 0.413313 | 3.3:+81833382 | MS.gene38588:intron |
| AGACGGATCTGTCCTTATTC+CGG | 0.415683 | 3.3:+81844165 | MS.gene38588:CDS |
| TCCCCTCCTATAGGAGCATC+TGG | 0.416543 | 3.3:-81838870 | None:intergenic |
| TGGGCTTGGTGCTGTAGGCT+TGG | 0.418349 | 3.3:+81833455 | MS.gene38588:CDS |
| TCAAGATATTCCTCTTGATA+AGG | 0.419451 | 3.3:+81826737 | MS.gene38588:CDS |
| CGTACCGAGGCAGGTGCTGC+TGG | 0.422945 | 3.3:+81841668 | MS.gene38588:CDS |
| GGGAGGATTCTTCCACAATA+AGG | 0.425570 | 3.3:+81838889 | MS.gene38588:CDS |
| TGAGCATTTCTGCAGAACTT+TGG | 0.427246 | 3.3:+81842114 | MS.gene38588:intron |
| GGAGCCATTGAGGCCATTCA+TGG | 0.427597 | 3.3:+81844186 | MS.gene38588:CDS |
| CATTGTTTCCGTACCGAGGC+AGG | 0.428807 | 3.3:+81841659 | MS.gene38588:CDS |
| ACTCATCCAGATGCTCCTAT+AGG | 0.434401 | 3.3:+81838864 | MS.gene38588:CDS |
| ATCACAAGAGGTGGACTTCA+AGG | 0.435593 | 3.3:+81834798 | MS.gene38588:CDS |
| CCTCCCATGAATGGCCTCAA+TGG | 0.436697 | 3.3:-81844190 | None:intergenic |
| GATCAAGTTCCTTTCCAAGT+TGG | 0.436930 | 3.3:-81839089 | None:intergenic |
| ACAGAGTCGTGGAGAGTGTA+GGG | 0.439450 | 3.3:+81826460 | MS.gene38588:intron |
| CTCAGTTGCGGTGTTTCCAC+AGG | 0.447139 | 3.3:+81826768 | MS.gene38588:CDS |
| TTCCATCTCTTGGCATGTCA+AGG | 0.447447 | 3.3:-81826608 | None:intergenic |
| GACTATCAGAGCCGTCGATT+GGG | 0.448600 | 3.3:+81843992 | MS.gene38588:CDS |
| AACGGATACTCTTTCCTTGA+AGG | 0.450121 | 3.3:-81834846 | None:intergenic |
| GGACAGATCCGTCTTCTTGT+TGG | 0.450529 | 3.3:-81844156 | None:intergenic |
| GAAGAATCCTCCCCTCCTAT+AGG | 0.451861 | 3.3:-81838879 | None:intergenic |
| GATGTTGAGGCATGGATGCC+TGG | 0.456063 | 3.3:+81842181 | MS.gene38588:CDS |
| TATAGGCGTTGATCTAAATC+AGG | 0.457697 | 3.3:+81833675 | MS.gene38588:CDS |
| AGCAGGTGCGCCTAAATCTT+CGG | 0.458196 | 3.3:-81842146 | None:intergenic |
| TCTGTTACAGGAACTTAACT+TGG | 0.459373 | 3.3:+81834765 | MS.gene38588:intron |
| AAATTTGTCGTTGCAGGTGG+AGG | 0.459716 | 3.3:-81833868 | None:intergenic |
| GTGATTAAGGATATGACAAA+TGG | 0.463825 | 3.3:+81834139 | MS.gene38588:CDS |
| AATTAGACCCACCTAAATCA+TGG | 0.464922 | 3.3:+81825974 | MS.gene38588:CDS |
| GAATCTCTGCAGTGCCGATA+AGG | 0.466024 | 3.3:-81841565 | None:intergenic |
| GCATCTGGATGAGTCATGTT+TGG | 0.471368 | 3.3:-81838855 | None:intergenic |
| GAAGGAGGGACTTACTGCTT+TGG | 0.472224 | 3.3:+81838779 | MS.gene38588:CDS |
| ACACCTGGAGCCGCCGGAAA+CGG | 0.473698 | 3.3:+81823871 | MS.gene38588:CDS |
| CAGGAAGTTGAGAGAGTTCG+TGG | 0.475368 | 3.3:+81838573 | MS.gene38588:intron |
| TGCAGTGGCTAATAAGATGA+AGG | 0.481696 | 3.3:+81838605 | MS.gene38588:CDS |
| GTCAAGGATCATCTCCAACT+TGG | 0.483492 | 3.3:+81839075 | MS.gene38588:CDS |
| AGACTATCAGAGCCGTCGAT+TGG | 0.484317 | 3.3:+81843991 | MS.gene38588:CDS |
| CGTACTTCCCATGATTTAGG+TGG | 0.486581 | 3.3:-81825982 | None:intergenic |
| TTACAGGAACTTAACTTGGA+TGG | 0.487365 | 3.3:+81834769 | MS.gene38588:intron |
| CTTGTAACGCTTCTGATGAT+CGG | 0.487709 | 3.3:-81825783 | None:intergenic |
| TTGCTTCGAATGCATAGGCT+TGG | 0.488095 | 3.3:+81834174 | MS.gene38588:CDS |
| TACAAATTTGTCGTTGCAGG+TGG | 0.492123 | 3.3:-81833871 | None:intergenic |
| GTACTTCTGTTGGACGATAC+CGG | 0.493596 | 3.3:-81844018 | None:intergenic |
| TCCAACAGAAGTACTTGTCC+CGG | 0.494173 | 3.3:+81844027 | MS.gene38588:CDS |
| GATAGGGGCAGCTTGGAAGG+TGG | 0.495016 | 3.3:+81833398 | MS.gene38588:CDS |
| GCACTGCAGAGATTCCTGTT+GGG | 0.495625 | 3.3:+81841573 | MS.gene38588:CDS |
| TCTATAGTAGCTTTCCATTG+AGG | 0.499766 | 3.3:-81837844 | None:intergenic |
| GAATGTGGAAGAAGTGAAAG+AGG | 0.499905 | 3.3:+81826485 | MS.gene38588:CDS |
| GCTTAATGATGAGCTTCAAC+GGG | 0.499991 | 3.3:+81838818 | MS.gene38588:CDS |
| ATATCAAGCCCTCCCATGAA+TGG | 0.501535 | 3.3:-81844199 | None:intergenic |
| GGGGAAAACGGTGATAATTG+GGG | 0.503172 | 3.3:+81834389 | MS.gene38588:CDS |
| TCATAAGGACTTAAAGTCAA+TGG | 0.503495 | 3.3:-81834429 | None:intergenic |
| GTCATCACACCTGGAGCCGC+CGG | 0.503811 | 3.3:+81823865 | MS.gene38588:CDS |
| CACTGCAGAGATTCCTGTTG+GGG | 0.506092 | 3.3:+81841574 | MS.gene38588:CDS |
| CGATCATCAGAAGCGTTACA+AGG | 0.506663 | 3.3:+81825784 | MS.gene38588:CDS |
| TTGCAGGGATAGGGGCAGCT+TGG | 0.510319 | 3.3:+81833391 | MS.gene38588:intron |
| TTCAACTTCCTCTATGACAA+GGG | 0.512129 | 3.3:-81825953 | None:intergenic |
| GGAGAGTGTAGGGGAGAATG+TGG | 0.512251 | 3.3:+81826470 | MS.gene38588:CDS |
| AGCTTAATGATGAGCTTCAA+CGG | 0.513437 | 3.3:+81838817 | MS.gene38588:CDS |
| AAGGTGGCGGATGTAGAAAA+AGG | 0.514460 | 3.3:+81833414 | MS.gene38588:CDS |
| GAATGCAGGGAAGAATTTGA+AGG | 0.514570 | 3.3:+81838761 | MS.gene38588:intron |
| AAATACCGTCTTCCTTATTG+TGG | 0.516317 | 3.3:-81838901 | None:intergenic |
| GGCACTGCAGAGATTCCTGT+TGG | 0.518136 | 3.3:+81841572 | MS.gene38588:CDS |
| TATAGACTTCAAGTGGATCA+AGG | 0.518299 | 3.3:+81837861 | MS.gene38588:CDS |
| ATGAATGGCCTCAATGGCTC+CGG | 0.520657 | 3.3:-81844184 | None:intergenic |
| TCCTTATTCCGGAGCCATTG+AGG | 0.522196 | 3.3:+81844176 | MS.gene38588:CDS |
| GTATACTTTGATTAGGGCTG+GGG | 0.522571 | 3.3:+81834369 | MS.gene38588:intron |
| AGGGGCAGCTTGGAAGGTGG+CGG | 0.522982 | 3.3:+81833401 | MS.gene38588:CDS |
| GTTAGTGTTTGGCGCTCAGA+TGG | 0.524079 | 3.3:-81838639 | None:intergenic |
| TAAATTGTTTATTCTTCAGA+AGG | 0.524440 | 3.3:+81837963 | MS.gene38588:CDS |
| TTATCGTAAATTTGATGTTG+AGG | 0.527976 | 3.3:+81842168 | MS.gene38588:CDS |
| AGTGCCAGCAGCACCTGCCT+CGG | 0.529025 | 3.3:-81841672 | None:intergenic |
| CGGAAACGGATCAAACATAT+CGG | 0.530331 | 3.3:+81823885 | MS.gene38588:CDS |
| ATGCCTGGTTTAGAACGGTT+TGG | 0.531725 | 3.3:+81842196 | MS.gene38588:CDS |
| CCAAATTAGCATCAGAATTG+CGG | 0.533098 | 3.3:-81837918 | None:intergenic |
| ACATCAAATTTACGATAAGC+AGG | 0.533168 | 3.3:-81842163 | None:intergenic |
| CTTGGCATCCTTAATGGCAG+AGG | 0.533409 | 3.3:+81834192 | MS.gene38588:CDS |
| CCACAGTTTGGGAGGAACAC+TGG | 0.534671 | 3.3:-81826522 | None:intergenic |
| TTGTATCCTTGCAGGGATAG+GGG | 0.535538 | 3.3:+81833383 | MS.gene38588:intron |
| AATTTGTCGTTGCAGGTGGA+GGG | 0.536433 | 3.3:-81833867 | None:intergenic |
| TCCAAATAGTGATCCGGTGA+TGG | 0.537355 | 3.3:-81834469 | None:intergenic |
| AGCGTTACAAGGGAATATAT+TGG | 0.540527 | 3.3:+81825795 | MS.gene38588:CDS |
| CAGCAGCACCTGCCTCGGTA+CGG | 0.543838 | 3.3:-81841667 | None:intergenic |
| CAAGCCTCCAAATAGTGATC+CGG | 0.545658 | 3.3:-81834475 | None:intergenic |
| AGTAGACATATAATCATTCG+TGG | 0.546412 | 3.3:-81844124 | None:intergenic |
| TACTGCTTTGGAAGAAGACC+TGG | 0.548466 | 3.3:+81838791 | MS.gene38588:CDS |
| AGGGATAGGGGCAGCTTGGA+AGG | 0.549497 | 3.3:+81833395 | MS.gene38588:intron |
| AGTTGGAGATGATCCTTGAC+AGG | 0.549831 | 3.3:-81839072 | None:intergenic |
| AGATTAACTCTACAAAAGAA+AGG | 0.549881 | 3.3:+81825706 | MS.gene38588:CDS |
| ATCCTTGACATGCCAAGAGA+TGG | 0.551996 | 3.3:+81826606 | MS.gene38588:CDS |
| GAAGACATGTTCTCATCCCT+AGG | 0.552439 | 3.3:+81842007 | MS.gene38588:CDS |
| CCCGGGACAAGTACTTCTGT+TGG | 0.553956 | 3.3:-81844028 | None:intergenic |
| ATGTAGGTGGAAAACCTCAA+TGG | 0.554153 | 3.3:+81837830 | MS.gene38588:intron |
| GTAGAGTTAATCTTAGACTG+TGG | 0.554226 | 3.3:-81825696 | None:intergenic |
| AGAAGTGAAAGAGGGCGACT+TGG | 0.555464 | 3.3:+81826494 | MS.gene38588:CDS |
| TAACAACACCTGAAATTGTA+CGG | 0.556606 | 3.3:+81841244 | MS.gene38588:CDS |
| CATCCAGATGCTCCTATAGG+AGG | 0.557360 | 3.3:+81838867 | MS.gene38588:CDS |
| GAAAACGGTGATAATTGGGG+TGG | 0.557825 | 3.3:+81834392 | MS.gene38588:CDS |
| CTGCAGTGCCGATAAGGCAT+TGG | 0.560075 | 3.3:-81841559 | None:intergenic |
| TGCATTCACCACAGTTTGGG+AGG | 0.560405 | 3.3:-81826530 | None:intergenic |
| ATCCAGATGCTCCTATAGGA+GGG | 0.560485 | 3.3:+81838868 | MS.gene38588:CDS |
| CATGGATGCCTGGTTTAGAA+CGG | 0.561477 | 3.3:+81842191 | MS.gene38588:CDS |
| AGGTGAACCCCTTGTCATAG+AGG | 0.563425 | 3.3:+81825945 | MS.gene38588:CDS |
| GTACTTCCCATGATTTAGGT+GGG | 0.563464 | 3.3:-81825981 | None:intergenic |
| CGCCAAACACTAACTGAACA+AGG | 0.566436 | 3.3:+81838648 | MS.gene38588:CDS |
| CTAAAAGGCAAAACCATCAC+CGG | 0.569450 | 3.3:+81834456 | MS.gene38588:CDS |
| GGCAAGCCAATAAGATGCAA+AGG | 0.570572 | 3.3:+81825816 | MS.gene38588:CDS |
| TCTCTTGGCATGTCAAGGAT+CGG | 0.570734 | 3.3:-81826603 | None:intergenic |
| GAAAGAGGTGTCATCACACC+TGG | 0.571021 | 3.3:+81823856 | MS.gene38588:CDS |
| TCACCAAACCGTTCTAAACC+AGG | 0.571662 | 3.3:-81842199 | None:intergenic |
| GGATTAATCGTGAATGAAAG+AGG | 0.574720 | 3.3:+81823841 | None:intergenic |
| TACAATTAAGTACAGAGTCG+TGG | 0.574732 | 3.3:+81826449 | MS.gene38588:intron |
| ATCACCGGATCACTATTTGG+AGG | 0.575953 | 3.3:+81834471 | MS.gene38588:CDS |
| TGAAGCAGTTCTATTAGAGA+TGG | 0.577703 | 3.3:+81841170 | MS.gene38588:CDS |
| CTCACTTGAAATGTAACCCT+AGG | 0.578253 | 3.3:-81842024 | None:intergenic |
| CATTGAGGCCATTCATGGGA+GGG | 0.579345 | 3.3:+81844191 | MS.gene38588:CDS |
| TTCTCATTGTTTCCGTACCG+AGG | 0.579716 | 3.3:+81841655 | MS.gene38588:CDS |
| GCAGGGAAGAATTTGAAGGA+GGG | 0.582239 | 3.3:+81838765 | MS.gene38588:intron |
| AAGGCTTGCTTGCTCAGTTG+CGG | 0.582731 | 3.3:+81826756 | MS.gene38588:CDS |
| GGATCATCTCCAACTTGGAA+AGG | 0.583822 | 3.3:+81839080 | MS.gene38588:CDS |
| TACAGAGTCGTGGAGAGTGT+AGG | 0.586438 | 3.3:+81826459 | MS.gene38588:intron |
| TGGTTTAGAACGGTTTGGTG+AGG | 0.589958 | 3.3:+81842201 | MS.gene38588:CDS |
| AAGCTACTATAGACTTCAAG+TGG | 0.591029 | 3.3:+81837854 | MS.gene38588:CDS |
| GAGCCATTGAGGCCATTCAT+GGG | 0.591133 | 3.3:+81844187 | MS.gene38588:CDS |
| ATTCTTGGAAACCTAGCAGT+AGG | 0.592994 | 3.3:-81826203 | None:intergenic |
| TCCAGATGCTCCTATAGGAG+GGG | 0.593632 | 3.3:+81838869 | MS.gene38588:CDS |
| ATTAGACCCACCTAAATCAT+GGG | 0.594297 | 3.3:+81825975 | MS.gene38588:CDS |
| GTGCTGCTGGCACTGCAACA+AGG | 0.594968 | 3.3:+81841681 | MS.gene38588:CDS |
| GCAGTGGCTAATAAGATGAA+GGG | 0.596858 | 3.3:+81838606 | MS.gene38588:CDS |
| TAAGTACTTCTGAGCAAGGA+GGG | 0.597060 | 3.3:-81834517 | None:intergenic |
| AATGTGGAAGAAGTGAAAGA+GGG | 0.597105 | 3.3:+81826486 | MS.gene38588:CDS |
| GTAAATTTGATGTTGAGGCA+TGG | 0.597186 | 3.3:+81842173 | MS.gene38588:CDS |
| GAGAATTACCAACAAGAAGA+CGG | 0.597615 | 3.3:+81844148 | MS.gene38588:CDS |
| GATTATTGCTTCGAATGCAT+AGG | 0.597733 | 3.3:+81834169 | MS.gene38588:CDS |
| AGCAAGCAAGCCTTATCAAG+AGG | 0.598014 | 3.3:-81826747 | None:intergenic |
| CTCTCAGAAGTGATGAAGAG+AGG | 0.598060 | 3.3:+81841210 | MS.gene38588:CDS |
| ATTAAGGATATGACAAATGG+AGG | 0.599771 | 3.3:+81834142 | MS.gene38588:CDS |
| TGTCTAAGTACTTCTGAGCA+AGG | 0.606047 | 3.3:-81834521 | None:intergenic |
| TGCAGGGAAGAATTTGAAGG+AGG | 0.611002 | 3.3:+81838764 | MS.gene38588:intron |
| TGGCTTCATATCACAAGAGG+TGG | 0.612272 | 3.3:+81834789 | MS.gene38588:CDS |
| TTCTTCCACAATAAGGAAGA+CGG | 0.614769 | 3.3:+81838896 | MS.gene38588:CDS |
| TAGGGACATGAAAGGAGAAG+TGG | 0.619690 | 3.3:+81826641 | MS.gene38588:CDS |
| TGCCAAGAGATGGAACAAGC+AGG | 0.620572 | 3.3:+81826616 | MS.gene38588:CDS |
| AGATGCTCCTATAGGAGGGG+AGG | 0.621334 | 3.3:+81838872 | MS.gene38588:CDS |
| ATTCAACTTCCTCTATGACA+AGG | 0.625158 | 3.3:-81825954 | None:intergenic |
| AAGACATGTTCTCATCCCTA+GGG | 0.626721 | 3.3:+81842008 | MS.gene38588:CDS |
| TCAACTTCCTCTATGACAAG+GGG | 0.628421 | 3.3:-81825952 | None:intergenic |
| CCAACAGAAGTACTTGTCCC+GGG | 0.629573 | 3.3:+81844028 | MS.gene38588:CDS |
| CCATTGAGGCCATTCATGGG+AGG | 0.629690 | 3.3:+81844190 | MS.gene38588:CDS |
| ATAATTGGGGTGGAAATGCA+CGG | 0.632504 | 3.3:+81834402 | MS.gene38588:CDS |
| TCACTTGAAATGTAACCCTA+GGG | 0.633087 | 3.3:-81842023 | None:intergenic |
| CACGCTGCTTCACAGGTCAG+TGG | 0.633207 | 3.3:+81841123 | MS.gene38588:intron |
| CAACGACAAATTTGTAAGCG+AGG | 0.635191 | 3.3:+81833878 | MS.gene38588:CDS |
| GCTCATCATTAAGCTTCACC+AGG | 0.637240 | 3.3:-81838809 | None:intergenic |
| TATACTTTGATTAGGGCTGG+GGG | 0.638684 | 3.3:+81834370 | MS.gene38588:intron |
| TAATGATGAGCTTCAACGGG+AGG | 0.643259 | 3.3:+81838821 | MS.gene38588:CDS |
| GGATGGCTTCATATCACAAG+AGG | 0.646176 | 3.3:+81834786 | MS.gene38588:CDS |
| AGCAGGTTTAGGGACATGAA+AGG | 0.654568 | 3.3:+81826633 | MS.gene38588:CDS |
| GATCATCAGAAGCGTTACAA+GGG | 0.662460 | 3.3:+81825785 | MS.gene38588:CDS |
| AAGTACTTCTGAGCAAGGAG+GGG | 0.663616 | 3.3:-81834516 | None:intergenic |
| CTAAGTACTTCTGAGCAAGG+AGG | 0.669426 | 3.3:-81834518 | None:intergenic |
| ACTGCAGAGATTCCTGTTGG+GGG | 0.671727 | 3.3:+81841575 | MS.gene38588:CDS |
| CAGAGTCGTGGAGAGTGTAG+GGG | 0.676936 | 3.3:+81826461 | MS.gene38588:intron |
| TCGTGGAGAGAGAAATGCAG+TGG | 0.678883 | 3.3:+81838590 | MS.gene38588:CDS |
| TATGTTTGATCCGTTTCCGG+CGG | 0.681976 | 3.3:-81823881 | None:intergenic |
| AACGTGTGAACAAACTGTGG+CGG | 0.686971 | 3.3:-81844079 | None:intergenic |
| AGGTGCGCCTAAATCTTCGG+AGG | 0.706651 | 3.3:-81842143 | None:intergenic |
| TCCAAAAGGTGACATCAGAG+TGG | 0.707208 | 3.3:-81826032 | None:intergenic |
| CCAGTGTTCCTCCCAAACTG+TGG | 0.714540 | 3.3:+81826522 | MS.gene38588:CDS |
| GATACCGGATTCCCAATCGA+CGG | 0.717257 | 3.3:-81844003 | None:intergenic |
| AATAATCACTCTCTTCTGGG+CGG | 0.726189 | 3.3:-81841958 | None:intergenic |
| GCTGTTGCAGCAAAGCAACG+AGG | 0.749239 | 3.3:+81833640 | MS.gene38588:CDS |
| TTTAACGTGTGAACAAACTG+TGG | 0.755868 | 3.3:-81844082 | None:intergenic |
| AGTGGTGGATGTAACCCATG+TGG | 0.808348 | 3.3:+81826704 | MS.gene38588:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 81823854 | 81844240 | 81823854 | ID=MS.gene38588 |
| chr3.3 | mRNA | 81823854 | 81844240 | 81823854 | ID=MS.gene38588.t1;Parent=MS.gene38588 |
| chr3.3 | exon | 81823854 | 81823906 | 81823854 | ID=MS.gene38588.t1.exon1;Parent=MS.gene38588.t1 |
| chr3.3 | CDS | 81823854 | 81823906 | 81823854 | ID=cds.MS.gene38588.t1;Parent=MS.gene38588.t1 |
| chr3.3 | exon | 81825683 | 81825837 | 81825683 | ID=MS.gene38588.t1.exon2;Parent=MS.gene38588.t1 |
| chr3.3 | CDS | 81825683 | 81825837 | 81825683 | ID=cds.MS.gene38588.t1;Parent=MS.gene38588.t1 |
| chr3.3 | exon | 81825926 | 81826068 | 81825926 | ID=MS.gene38588.t1.exon3;Parent=MS.gene38588.t1 |
| chr3.3 | CDS | 81825926 | 81826068 | 81825926 | ID=cds.MS.gene38588.t1;Parent=MS.gene38588.t1 |
| chr3.3 | exon | 81826200 | 81826246 | 81826200 | ID=MS.gene38588.t1.exon4;Parent=MS.gene38588.t1 |
| chr3.3 | CDS | 81826200 | 81826246 | 81826200 | ID=cds.MS.gene38588.t1;Parent=MS.gene38588.t1 |
| chr3.3 | exon | 81826464 | 81826789 | 81826464 | ID=MS.gene38588.t1.exon5;Parent=MS.gene38588.t1 |
| chr3.3 | CDS | 81826464 | 81826789 | 81826464 | ID=cds.MS.gene38588.t1;Parent=MS.gene38588.t1 |
| chr3.3 | exon | 81833397 | 81833479 | 81833397 | ID=MS.gene38588.t1.exon6;Parent=MS.gene38588.t1 |
| chr3.3 | CDS | 81833397 | 81833479 | 81833397 | ID=cds.MS.gene38588.t1;Parent=MS.gene38588.t1 |
| chr3.3 | exon | 81833637 | 81833712 | 81833637 | ID=MS.gene38588.t1.exon7;Parent=MS.gene38588.t1 |
| chr3.3 | CDS | 81833637 | 81833712 | 81833637 | ID=cds.MS.gene38588.t1;Parent=MS.gene38588.t1 |
| chr3.3 | exon | 81833835 | 81833899 | 81833835 | ID=MS.gene38588.t1.exon8;Parent=MS.gene38588.t1 |
| chr3.3 | CDS | 81833835 | 81833899 | 81833835 | ID=cds.MS.gene38588.t1;Parent=MS.gene38588.t1 |
| chr3.3 | exon | 81834139 | 81834234 | 81834139 | ID=MS.gene38588.t1.exon9;Parent=MS.gene38588.t1 |
| chr3.3 | CDS | 81834139 | 81834234 | 81834139 | ID=cds.MS.gene38588.t1;Parent=MS.gene38588.t1 |
| chr3.3 | exon | 81834384 | 81834545 | 81834384 | ID=MS.gene38588.t1.exon10;Parent=MS.gene38588.t1 |
| chr3.3 | CDS | 81834384 | 81834545 | 81834384 | ID=cds.MS.gene38588.t1;Parent=MS.gene38588.t1 |
| chr3.3 | exon | 81834775 | 81834859 | 81834775 | ID=MS.gene38588.t1.exon11;Parent=MS.gene38588.t1 |
| chr3.3 | CDS | 81834775 | 81834859 | 81834775 | ID=cds.MS.gene38588.t1;Parent=MS.gene38588.t1 |
| chr3.3 | exon | 81837836 | 81837984 | 81837836 | ID=MS.gene38588.t1.exon12;Parent=MS.gene38588.t1 |
| chr3.3 | CDS | 81837836 | 81837984 | 81837836 | ID=cds.MS.gene38588.t1;Parent=MS.gene38588.t1 |
| chr3.3 | exon | 81838576 | 81838669 | 81838576 | ID=MS.gene38588.t1.exon13;Parent=MS.gene38588.t1 |
| chr3.3 | CDS | 81838576 | 81838669 | 81838576 | ID=cds.MS.gene38588.t1;Parent=MS.gene38588.t1 |
| chr3.3 | exon | 81838769 | 81838917 | 81838769 | ID=MS.gene38588.t1.exon14;Parent=MS.gene38588.t1 |
| chr3.3 | CDS | 81838769 | 81838917 | 81838769 | ID=cds.MS.gene38588.t1;Parent=MS.gene38588.t1 |
| chr3.3 | exon | 81839045 | 81839137 | 81839045 | ID=MS.gene38588.t1.exon15;Parent=MS.gene38588.t1 |
| chr3.3 | CDS | 81839045 | 81839137 | 81839045 | ID=cds.MS.gene38588.t1;Parent=MS.gene38588.t1 |
| chr3.3 | exon | 81841138 | 81841317 | 81841138 | ID=MS.gene38588.t1.exon16;Parent=MS.gene38588.t1 |
| chr3.3 | CDS | 81841138 | 81841317 | 81841138 | ID=cds.MS.gene38588.t1;Parent=MS.gene38588.t1 |
| chr3.3 | exon | 81841536 | 81841702 | 81841536 | ID=MS.gene38588.t1.exon17;Parent=MS.gene38588.t1 |
| chr3.3 | CDS | 81841536 | 81841702 | 81841536 | ID=cds.MS.gene38588.t1;Parent=MS.gene38588.t1 |
| chr3.3 | exon | 81841907 | 81842041 | 81841907 | ID=MS.gene38588.t1.exon18;Parent=MS.gene38588.t1 |
| chr3.3 | CDS | 81841907 | 81842041 | 81841907 | ID=cds.MS.gene38588.t1;Parent=MS.gene38588.t1 |
| chr3.3 | exon | 81842129 | 81842222 | 81842129 | ID=MS.gene38588.t1.exon19;Parent=MS.gene38588.t1 |
| chr3.3 | CDS | 81842129 | 81842222 | 81842129 | ID=cds.MS.gene38588.t1;Parent=MS.gene38588.t1 |
| chr3.3 | exon | 81843968 | 81844240 | 81843968 | ID=MS.gene38588.t1.exon20;Parent=MS.gene38588.t1 |
| chr3.3 | CDS | 81843968 | 81844240 | 81843968 | ID=cds.MS.gene38588.t1;Parent=MS.gene38588.t1 |
| Gene Sequence |
| Protein sequence |
