Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005297.t1 | XP_003591202.3 | 79.2 | 814 | 141 | 8 | 1 | 808 | 3 | 794 | 0.00E+00 | 1122.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005297.t1 | A0A396JRD2 | 79.7 | 770 | 137 | 6 | 45 | 808 | 1 | 757 | 0.0e+00 | 1078.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene072558 | MS.gene005297 | PPI |
| MS.gene45026 | MS.gene005297 | PPI |
| MS.gene005297 | MS.gene44175 | PPI |
| MS.gene005297 | MS.gene40803 | PPI |
| MS.gene005297 | MS.gene050959 | PPI |
| MS.gene005297 | MS.gene050756 | PPI |
| MS.gene40803 | MS.gene005297 | PPI |
| MS.gene44175 | MS.gene005297 | PPI |
| MS.gene005297 | MS.gene054400 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005297.t1 | MTR_1g083850 | 86.957 | 759 | 84 | 5 | 56 | 808 | 1 | 750 | 0.0 | 1288 |
| MS.gene005297.t1 | MTR_7g112030 | 47.357 | 927 | 352 | 27 | 1 | 808 | 1 | 910 | 0.0 | 663 |
| MS.gene005297.t1 | MTR_2g034810 | 28.846 | 936 | 501 | 34 | 8 | 805 | 12 | 920 | 2.58e-71 | 252 |
| MS.gene005297.t1 | MTR_7g082220 | 41.509 | 106 | 53 | 3 | 703 | 805 | 835 | 934 | 1.58e-14 | 78.6 |
| MS.gene005297.t1 | MTR_6g018770 | 31.111 | 180 | 101 | 10 | 639 | 805 | 708 | 877 | 1.05e-13 | 75.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005297.t1 | AT3G58650 | 29.277 | 871 | 485 | 31 | 1 | 805 | 4 | 809 | 2.48e-67 | 239 |
| MS.gene005297.t1 | AT5G26910 | 28.425 | 876 | 502 | 31 | 1 | 805 | 4 | 825 | 5.43e-61 | 222 |
| MS.gene005297.t1 | AT5G26910 | 28.425 | 876 | 502 | 31 | 1 | 805 | 4 | 825 | 5.43e-61 | 222 |
| MS.gene005297.t1 | AT5G26910 | 28.196 | 876 | 503 | 30 | 1 | 805 | 4 | 824 | 5.67e-60 | 219 |
| MS.gene005297.t1 | AT5G26910 | 29.341 | 501 | 285 | 18 | 1 | 443 | 4 | 493 | 1.00e-28 | 122 |
| MS.gene005297.t1 | AT3G05750 | 30.134 | 448 | 245 | 16 | 54 | 443 | 54 | 491 | 1.44e-22 | 103 |
| MS.gene005297.t1 | AT3G05750 | 36.478 | 159 | 89 | 3 | 652 | 805 | 638 | 789 | 5.31e-16 | 83.2 |
| MS.gene005297.t1 | AT3G05750 | 27.632 | 456 | 246 | 13 | 54 | 443 | 62 | 499 | 1.56e-22 | 103 |
| MS.gene005297.t1 | AT3G05750 | 36.478 | 159 | 89 | 3 | 652 | 805 | 646 | 797 | 5.78e-16 | 82.8 |
| MS.gene005297.t1 | AT3G05750 | 27.467 | 375 | 211 | 11 | 113 | 443 | 39 | 396 | 4.04e-19 | 92.8 |
| MS.gene005297.t1 | AT3G05750 | 36.478 | 159 | 89 | 3 | 652 | 805 | 543 | 694 | 4.60e-16 | 83.2 |
| MS.gene005297.t1 | AT3G05750 | 27.467 | 375 | 211 | 11 | 113 | 443 | 39 | 396 | 4.04e-19 | 92.8 |
| MS.gene005297.t1 | AT3G05750 | 36.478 | 159 | 89 | 3 | 652 | 805 | 543 | 694 | 4.60e-16 | 83.2 |
Find 151 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACCTGCTTAGTGATAAAT+TGG | 0.140845 | 1.1:+62121019 | MS.gene005297:CDS |
| TCTAAATATGCTGCATTCTT+AGG | 0.165931 | 1.1:-62119961 | None:intergenic |
| GACATTGAAGCCTTTGAAAA+TGG | 0.201384 | 1.1:+62122315 | MS.gene005297:CDS |
| TGACTTAAGAGCCATGTTTA+AGG | 0.207080 | 1.1:-62119776 | None:intergenic |
| TCTTGATCTGCAAGAGAAAT+TGG | 0.213960 | 1.1:+62120074 | MS.gene005297:CDS |
| TGAAGTTGATTTACCTTTGC+TGG | 0.221523 | 1.1:-62120355 | None:intergenic |
| TGAACCAAAGGCTCATAAAA+TGG | 0.230963 | 1.1:+62119822 | MS.gene005297:CDS |
| ATCACTACTAATTGATAATA+AGG | 0.265224 | 1.1:-62119650 | None:intergenic |
| ACAGGTTTGTGTTGACTTAT+TGG | 0.265851 | 1.1:-62120388 | None:intergenic |
| GCCTAAGAACGGTGCTGTTC+TGG | 0.287283 | 1.1:-62120329 | None:intergenic |
| TGTTGAATTTGAATGGAAAT+AGG | 0.295796 | 1.1:+62120256 | MS.gene005297:CDS |
| TTGTGATAAAAGTGTTTCTT+TGG | 0.305866 | 1.1:-62119124 | None:intergenic |
| TTCGGAAGAACTCTTTCTTT+TGG | 0.311731 | 1.1:-62120529 | None:intergenic |
| TACCTATTTGATAGATGAAT+TGG | 0.313922 | 1.1:+62122362 | MS.gene005297:CDS |
| AACCAATTCATCTTATATTC+AGG | 0.323610 | 1.1:-62121877 | None:intergenic |
| ATGAGTCTGGCTACTAGCCC+TGG | 0.328479 | 1.1:-62119697 | None:intergenic |
| AAAAGAATCAACATCAATTC+TGG | 0.330223 | 1.1:-62120775 | None:intergenic |
| CGAGAGATTCAGAAAATAAT+AGG | 0.331801 | 1.1:+62120163 | MS.gene005297:CDS |
| AAATAATTACCAGGTAAGTT+AGG | 0.347260 | 1.1:-62119148 | None:intergenic |
| ATTCTAACATTGAATCTAAA+AGG | 0.356408 | 1.1:+62120463 | MS.gene005297:CDS |
| TGAATCTCTCGAAACTTTGA+AGG | 0.369472 | 1.1:-62120151 | None:intergenic |
| CACCTGAATATAAGATGAAT+TGG | 0.375181 | 1.1:+62121875 | MS.gene005297:CDS |
| TAAGAATGCAGCATATTTAG+AGG | 0.380059 | 1.1:+62119963 | MS.gene005297:CDS |
| TTTATGAGCCTTTGGTTCAA+TGG | 0.380731 | 1.1:-62119818 | None:intergenic |
| GCCAACTCTCTTTGATCTGT+TGG | 0.381202 | 1.1:+62122005 | MS.gene005297:CDS |
| CTTATCAGTTACTCTTGTGC+TGG | 0.385816 | 1.1:-62120487 | None:intergenic |
| ACTCAGCAATGTAGAATTGA+TGG | 0.386018 | 1.1:+62121957 | MS.gene005297:CDS |
| AGGGATATGTTGAATTTGAA+TGG | 0.390361 | 1.1:+62120249 | MS.gene005297:CDS |
| AACCAATTCATCTATCAAAT+AGG | 0.394619 | 1.1:-62122364 | None:intergenic |
| TGGCATGAATCAGCAACTTC+AGG | 0.397356 | 1.1:+62121088 | MS.gene005297:CDS |
| TGAGCACTCCATTGGGTAGA+TGG | 0.402874 | 1.1:+62122283 | MS.gene005297:CDS |
| TCTTTGATCTGTTGGAGAAT+CGG | 0.419385 | 1.1:+62122013 | MS.gene005297:CDS |
| GGTCGAACTTTCTGAAGAAC+AGG | 0.421894 | 1.1:-62120406 | None:intergenic |
| TGTGCTCCTCATATATAGTT+GGG | 0.423119 | 1.1:-62120013 | None:intergenic |
| ATGAATTGGTTTCTGATTTG+TGG | 0.425319 | 1.1:+62122376 | MS.gene005297:CDS |
| TGAGTCTGGCTACTAGCCCT+GGG | 0.426455 | 1.1:-62119696 | None:intergenic |
| TCAAATTATGATACAATGCT+TGG | 0.428269 | 1.1:+62121068 | MS.gene005297:CDS |
| AGTAGCCAGACTCATGGGTT+TGG | 0.431579 | 1.1:+62119705 | MS.gene005297:CDS |
| TCCTACGAGGTTACATGTAA+TGG | 0.436748 | 1.1:+62120839 | MS.gene005297:CDS |
| ATATAACTTGCTCCTCATCT+TGG | 0.439222 | 1.1:-62120115 | None:intergenic |
| TACAAAATCATCAAGGATGA+TGG | 0.444399 | 1.1:+62121912 | MS.gene005297:CDS |
| TTGTTATGAGTAACTGAAAT+GGG | 0.447444 | 1.1:-62119901 | None:intergenic |
| GAACCAAAGGCTCATAAAAT+GGG | 0.450651 | 1.1:+62119823 | MS.gene005297:CDS |
| TGAATCCAAACCCATGAGTC+TGG | 0.452723 | 1.1:-62119710 | None:intergenic |
| TGAAGCCTTTGAAAATGGCT+TGG | 0.457955 | 1.1:+62122320 | MS.gene005297:CDS |
| GCCAGAACAGCACCGTTCTT+AGG | 0.459790 | 1.1:+62120328 | MS.gene005297:CDS |
| TTTCATCAGCAAAAGTAACT+TGG | 0.461060 | 1.1:+62121392 | MS.gene005297:CDS |
| ACTGATGCCACCATGCATCT+AGG | 0.461328 | 1.1:-62122159 | None:intergenic |
| ACAATTGTTTCAGATAAAGA+TGG | 0.464516 | 1.1:+62119576 | MS.gene005297:intron |
| AAGAATACTCTAAGCTCAAA+AGG | 0.473263 | 1.1:+62122058 | MS.gene005297:CDS |
| GAAGGGTGTGATAAGGCCCC+AGG | 0.473540 | 1.1:+62119679 | MS.gene005297:CDS |
| AAAATGAAACTTTGTCTCCA+AGG | 0.473878 | 1.1:+62119869 | MS.gene005297:CDS |
| GTTTGTTATCGTCCTAGCGC+TGG | 0.478195 | 1.1:-62120427 | None:intergenic |
| CAAGGACATGAGCACTCCAT+TGG | 0.478271 | 1.1:+62122275 | MS.gene005297:CDS |
| GCTTCCTTAGCTTCTTTGAT+CGG | 0.480496 | 1.1:+62119089 | MS.gene005297:CDS |
| TTTCAATGTTTCCCTTTGCA+TGG | 0.487929 | 1.1:-62119270 | None:intergenic |
| TTTGTTATGAGTAACTGAAA+TGG | 0.489794 | 1.1:-62119902 | None:intergenic |
| GAAATAGAACGGTGTTCTGT+TGG | 0.491216 | 1.1:+62120918 | MS.gene005297:CDS |
| TTGTGCTCCTCATATATAGT+TGG | 0.491806 | 1.1:-62120014 | None:intergenic |
| TATCACAATCCTAACTTACC+TGG | 0.492317 | 1.1:+62119139 | MS.gene005297:CDS |
| ATATACTTCTTCATCTTGCA+TGG | 0.495644 | 1.1:-62121827 | None:intergenic |
| ATTTCTGAGGCACATTGAGG+TGG | 0.497061 | 1.1:-62120900 | None:intergenic |
| AAGAGTAACTGATAAGCAAA+AGG | 0.502215 | 1.1:+62120494 | MS.gene005297:CDS |
| TTACAGCTTCGATCTTCCAT+TGG | 0.504233 | 1.1:-62121300 | None:intergenic |
| CTGTTGGAGAATCGGAGAAC+TGG | 0.510605 | 1.1:+62122021 | MS.gene005297:CDS |
| TGCCCAATTTATCACTAAGC+AGG | 0.510690 | 1.1:-62121022 | None:intergenic |
| AATAGGTCTTGCCTAGGTAA+AGG | 0.513285 | 1.1:+62120180 | MS.gene005297:CDS |
| CTTTGAACCTCGGCATTGGA+TGG | 0.515084 | 1.1:-62120225 | None:intergenic |
| CCTACTTTGAACCTCGGCAT+TGG | 0.515663 | 1.1:-62120229 | None:intergenic |
| TGAAATCATGCCAATGTCAC+AGG | 0.515734 | 1.1:+62119288 | MS.gene005297:CDS |
| GCATGGTATGCAACACATCA+AGG | 0.515846 | 1.1:+62120973 | MS.gene005297:CDS |
| CAGAAAGTTCGACCAGCGCT+AGG | 0.516699 | 1.1:+62120415 | MS.gene005297:CDS |
| CATTCCGATCAAAGAAGCTA+AGG | 0.517044 | 1.1:-62119093 | None:intergenic |
| GATGTTTCAAACCATGCAAA+GGG | 0.520211 | 1.1:+62119259 | MS.gene005297:intron |
| CTGGTGTTTACCTGTGACAT+TGG | 0.521249 | 1.1:-62119298 | None:intergenic |
| TTGCAGATCAAGAGTTCTCA+AGG | 0.524434 | 1.1:-62120064 | None:intergenic |
| AAGCATGGAAGAAGAGGTGA+TGG | 0.525379 | 1.1:+62122236 | MS.gene005297:CDS |
| CATATAGCATGACAGAAAGC+AGG | 0.529033 | 1.1:+62120664 | MS.gene005297:CDS |
| GGGCTAGTAGCCAGACTCAT+GGG | 0.531216 | 1.1:+62119700 | MS.gene005297:CDS |
| AATGGAGAAAAGAAGTTACA+AGG | 0.533794 | 1.1:+62119063 | None:intergenic |
| CAAGTCCCCAACTATATATG+AGG | 0.533920 | 1.1:+62120007 | MS.gene005297:CDS |
| GTTAGCAGAAGAAGTGTACA+AGG | 0.536107 | 1.1:+62122197 | MS.gene005297:CDS |
| GAAATGGGTTTAGCAGACCT+TGG | 0.538176 | 1.1:-62119886 | None:intergenic |
| GATGGAACTTGAATATGTAA+AGG | 0.538230 | 1.1:+62121930 | MS.gene005297:CDS |
| GATGTCGGAGTTTAGAAGCA+TGG | 0.546019 | 1.1:+62122221 | MS.gene005297:CDS |
| AAGGACATGAGCACTCCATT+GGG | 0.547496 | 1.1:+62122276 | MS.gene005297:CDS |
| CATCAGTGATGAGGAAAGGT+TGG | 0.550514 | 1.1:+62122175 | MS.gene005297:CDS |
| GAAAATAATAGGTCTTGCCT+AGG | 0.551230 | 1.1:+62120174 | MS.gene005297:CDS |
| TCTATTTCTGAGGCACATTG+AGG | 0.551487 | 1.1:-62120903 | None:intergenic |
| TTGTGATACCATTGAACCAA+AGG | 0.551569 | 1.1:+62119810 | MS.gene005297:CDS |
| CAATGCCGAGGTTCAAAGTA+GGG | 0.554685 | 1.1:+62120230 | MS.gene005297:CDS |
| CCAATGCCGAGGTTCAAAGT+AGG | 0.555210 | 1.1:+62120229 | MS.gene005297:CDS |
| TATAAAATGTAATGTTACAA+TGG | 0.555302 | 1.1:+62120620 | MS.gene005297:CDS |
| AGGAGCACAATGTCTTCAGT+TGG | 0.557248 | 1.1:+62120027 | MS.gene005297:CDS |
| CATGGAAGAAGAGGTGATGG+TGG | 0.557606 | 1.1:+62122239 | MS.gene005297:CDS |
| AGGGCTAGTAGCCAGACTCA+TGG | 0.557813 | 1.1:+62119699 | MS.gene005297:CDS |
| ATGGAGAAAAGAAGTTACAA+GGG | 0.561403 | 1.1:+62119064 | MS.gene005297:CDS |
| GTTTAGAAGCATGGAAGAAG+AGG | 0.561464 | 1.1:+62122230 | MS.gene005297:CDS |
| TTACATTTACATCTCCATTG+AGG | 0.562743 | 1.1:+62120700 | MS.gene005297:CDS |
| TTTGCTGGTTTGCCTAAGAA+CGG | 0.562748 | 1.1:-62120340 | None:intergenic |
| AGAGTTCTTCCGAAAAGAAG+AGG | 0.565687 | 1.1:+62120538 | MS.gene005297:CDS |
| CTAAGCAAGTGATGGAAACA+AGG | 0.566796 | 1.1:+62120751 | MS.gene005297:CDS |
| TCCAACAGATCAAAGAGAGT+TGG | 0.567522 | 1.1:-62122006 | None:intergenic |
| TGATGATGAAGGGTGTGATA+AGG | 0.567960 | 1.1:+62119672 | MS.gene005297:CDS |
| ATTAGTAGTGATGATGATGA+AGG | 0.568918 | 1.1:+62119661 | MS.gene005297:CDS |
| TCACTCCTTGCAATATCACT+AGG | 0.574555 | 1.1:-62119616 | None:intergenic |
| TTGTTGAAAGGTGCAAAGCA+TGG | 0.577795 | 1.1:+62122136 | MS.gene005297:CDS |
| AGAAGTGTACAAGGAGATGT+CGG | 0.578044 | 1.1:+62122206 | MS.gene005297:CDS |
| TCTTAGGCTTCATACTAACA+TGG | 0.580559 | 1.1:-62119945 | None:intergenic |
| TAGTGATAAATTGGGCAGCA+TGG | 0.582742 | 1.1:+62121028 | MS.gene005297:CDS |
| AGAACACCGTTCTATTTCTG+AGG | 0.582791 | 1.1:-62120913 | None:intergenic |
| AACCTGCTTAGTGATAAATT+GGG | 0.585492 | 1.1:+62121020 | MS.gene005297:CDS |
| TCACTTAGATTCCTTAAACA+TGG | 0.585838 | 1.1:+62119765 | MS.gene005297:CDS |
| TCTGTAGATATCAGAACCAA+TGG | 0.586401 | 1.1:+62121284 | MS.gene005297:intron |
| AATGCATGGAATTAAGATGC+AGG | 0.588770 | 1.1:+62122106 | MS.gene005297:CDS |
| AGATGTTTCAAACCATGCAA+AGG | 0.589368 | 1.1:+62119258 | MS.gene005297:intron |
| TTTCTGAGGCACATTGAGGT+GGG | 0.592064 | 1.1:-62120899 | None:intergenic |
| AAAGCTCTACAAAATCATCA+AGG | 0.594973 | 1.1:+62121905 | MS.gene005297:CDS |
| TAAGTGACAACATAATGAAG+TGG | 0.601855 | 1.1:-62119749 | None:intergenic |
| GTTGACTACTAAGCAAGTGA+TGG | 0.603259 | 1.1:+62120743 | MS.gene005297:CDS |
| CATATCCCTACTTTGAACCT+CGG | 0.606736 | 1.1:-62120235 | None:intergenic |
| AAGTCAAGCCATCTACCCAA+TGG | 0.609117 | 1.1:-62122291 | None:intergenic |
| GTGCTCCTCATATATAGTTG+GGG | 0.610822 | 1.1:-62120012 | None:intergenic |
| CGCAACACGGAACCAAGATG+AGG | 0.611483 | 1.1:+62120103 | MS.gene005297:CDS |
| AAAATCCTAGTGATATTGCA+AGG | 0.615461 | 1.1:+62119611 | MS.gene005297:CDS |
| AGAAGACAGATTTAACAGCA+TGG | 0.621284 | 1.1:+62120956 | MS.gene005297:CDS |
| GTGACAACATAATGAAGTGG+AGG | 0.623561 | 1.1:-62119746 | None:intergenic |
| GTTCTTAGGCAAACCAGCAA+AGG | 0.627546 | 1.1:+62120342 | MS.gene005297:CDS |
| CATGGTATGCAACACATCAA+GGG | 0.628447 | 1.1:+62120974 | MS.gene005297:CDS |
| CAAAGCATGGCCTAGATGCA+TGG | 0.630631 | 1.1:+62122149 | MS.gene005297:CDS |
| TGACTGTGTAAGTGAATGCA+TGG | 0.630868 | 1.1:+62122092 | MS.gene005297:CDS |
| GGTGGATGAGCTTGTTAGCA+AGG | 0.631696 | 1.1:+62122257 | MS.gene005297:CDS |
| CAGATAAAGATGGATGACAA+TGG | 0.641256 | 1.1:+62119586 | MS.gene005297:intron |
| GATAGTGAAGATAGCACATG+TGG | 0.644975 | 1.1:+62121414 | MS.gene005297:CDS |
| ATATAGCATGACAGAAAGCA+GGG | 0.649280 | 1.1:+62120665 | MS.gene005297:CDS |
| TGCAGATCAAGAGTTCTCAA+GGG | 0.654144 | 1.1:-62120063 | None:intergenic |
| GAGTCTGGCTACTAGCCCTG+GGG | 0.654903 | 1.1:-62119695 | None:intergenic |
| AATGTGCCTCAGAAATAGAA+CGG | 0.658499 | 1.1:+62120907 | MS.gene005297:CDS |
| AAGGGTGTGATAAGGCCCCA+GGG | 0.660078 | 1.1:+62119680 | MS.gene005297:CDS |
| TCCATTACATGTAACCTCGT+AGG | 0.664556 | 1.1:-62120840 | None:intergenic |
| CGTGATCAGAATGACGCACG+AGG | 0.670720 | 1.1:+62120561 | MS.gene005297:CDS |
| GGCATCTGCTAAGAGCATTG+AGG | 0.678302 | 1.1:+62119984 | MS.gene005297:CDS |
| GCATGGTGGCATCAGTGATG+AGG | 0.679121 | 1.1:+62122166 | MS.gene005297:CDS |
| TTAGTAGTGATGATGATGAA+GGG | 0.685067 | 1.1:+62119662 | MS.gene005297:CDS |
| GTGGCATCAGTGATGAGGAA+AGG | 0.685249 | 1.1:+62122171 | MS.gene005297:CDS |
| GGAGAATCGGAGAACTGGTG+TGG | 0.691183 | 1.1:+62122026 | MS.gene005297:CDS |
| TGTAACACCATCCAATGCCG+AGG | 0.692381 | 1.1:+62120218 | MS.gene005297:CDS |
| AAATTGGAAACAGCGCAACA+CGG | 0.695462 | 1.1:+62120090 | MS.gene005297:CDS |
| AGCATGGCCTAGATGCATGG+TGG | 0.715972 | 1.1:+62122152 | MS.gene005297:CDS |
| AATTATCATTATCTCCTACG+AGG | 0.717855 | 1.1:+62120826 | MS.gene005297:CDS |
| AGGACGATAACAAACAAATG+CGG | 0.767520 | 1.1:+62120435 | MS.gene005297:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGTAATAATAATAAGAA+AGG | - | chr1.1:62119562-62119581 | None:intergenic | 10.0% |
| !! | ATTGTAATAATAATAAGAAA+GGG | - | chr1.1:62119561-62119580 | None:intergenic | 10.0% |
| !! | TATAAAATGTAATGTTACAA+TGG | + | chr1.1:62120620-62120639 | MS.gene005297:CDS | 15.0% |
| !! | AAGAAAAAAATGGTTAAACT+AGG | - | chr1.1:62119351-62119370 | None:intergenic | 20.0% |
| !! | ATTCTAACATTGAATCTAAA+AGG | + | chr1.1:62120463-62120482 | MS.gene005297:CDS | 20.0% |
| !! | TAAACATAGTATATTATCCT+TGG | + | chr1.1:62121184-62121203 | MS.gene005297:intron | 20.0% |
| !!! | ATCACTACTAATTGATAATA+AGG | - | chr1.1:62119653-62119672 | None:intergenic | 20.0% |
| !!! | GAACAAGCATTAATATTTTA+TGG | - | chr1.1:62121766-62121785 | None:intergenic | 20.0% |
| !!! | TCATATATAACCCTTTTTTT+AGG | + | chr1.1:62121784-62121803 | MS.gene005297:intron | 20.0% |
| !!! | TTACTCATTTTCATTTGTTA+TGG | + | chr1.1:62121138-62121157 | MS.gene005297:intron | 20.0% |
| ! | AAAAGAATCAACATCAATTC+TGG | - | chr1.1:62120778-62120797 | None:intergenic | 25.0% |
| ! | AAAGACTAGAAATAATTACC+AGG | - | chr1.1:62119160-62119179 | None:intergenic | 25.0% |
| ! | AAATAATTACCAGGTAAGTT+AGG | - | chr1.1:62119151-62119170 | None:intergenic | 25.0% |
| ! | AACCAATTCATCTATCAAAT+AGG | - | chr1.1:62122367-62122386 | None:intergenic | 25.0% |
| ! | AACCAATTCATCTTATATTC+AGG | - | chr1.1:62121880-62121899 | None:intergenic | 25.0% |
| ! | ACAATTGTTTCAGATAAAGA+TGG | + | chr1.1:62119576-62119595 | MS.gene005297:intron | 25.0% |
| ! | ACTTCAAAGTTAAGCAAAAT+TGG | - | chr1.1:62121593-62121612 | None:intergenic | 25.0% |
| ! | GAGCAAAAAATATTCAGAAT+AGG | - | chr1.1:62119228-62119247 | None:intergenic | 25.0% |
| ! | GTCTTAACAAAATGTCATTA+GGG | - | chr1.1:62119416-62119435 | None:intergenic | 25.0% |
| ! | TACCTATTTGATAGATGAAT+TGG | + | chr1.1:62122362-62122381 | MS.gene005297:CDS | 25.0% |
| ! | TCAAACCAGAAAAATTGTAA+TGG | + | chr1.1:62120306-62120325 | MS.gene005297:CDS | 25.0% |
| ! | TCAAATTATGATACAATGCT+TGG | + | chr1.1:62121068-62121087 | MS.gene005297:CDS | 25.0% |
| ! | TGTAACAACAAAAATGAAAG+CGG | + | chr1.1:62121318-62121337 | MS.gene005297:CDS | 25.0% |
| ! | TGTCTTAACAAAATGTCATT+AGG | - | chr1.1:62119417-62119436 | None:intergenic | 25.0% |
| ! | TGTTGAATTTGAATGGAAAT+AGG | + | chr1.1:62120256-62120275 | MS.gene005297:CDS | 25.0% |
| ! | TTAAACTAGGAAACTAAGAA+AGG | - | chr1.1:62119338-62119357 | None:intergenic | 25.0% |
| ! | TTGTTATGAGTAACTGAAAT+GGG | - | chr1.1:62119904-62119923 | None:intergenic | 25.0% |
| !! | CTACATAAAACTTCCTTTTT+AGG | + | chr1.1:62119497-62119516 | MS.gene005297:intron | 25.0% |
| !! | GGAGATAATGATAATTTTTC+AGG | - | chr1.1:62120822-62120841 | None:intergenic | 25.0% |
| !! | TTTGTTATGAGTAACTGAAA+TGG | - | chr1.1:62119905-62119924 | None:intergenic | 25.0% |
| !!! | TATATAACCCTTTTTTTAGG+AGG | + | chr1.1:62121787-62121806 | MS.gene005297:intron | 25.0% |
| !!! | TTGTGATAAAAGTGTTTCTT+TGG | - | chr1.1:62119127-62119146 | None:intergenic | 25.0% |
| AAAATCCTAGTGATATTGCA+AGG | + | chr1.1:62119611-62119630 | MS.gene005297:CDS | 30.0% | |
| AAAATGAAACTTTGTCTCCA+AGG | + | chr1.1:62119869-62119888 | MS.gene005297:CDS | 30.0% | |
| AAAGCTCTACAAAATCATCA+AGG | + | chr1.1:62121905-62121924 | MS.gene005297:CDS | 30.0% | |
| AACCTGCTTAGTGATAAATT+GGG | + | chr1.1:62121020-62121039 | MS.gene005297:CDS | 30.0% | |
| AAGAATACTCTAAGCTCAAA+AGG | + | chr1.1:62122058-62122077 | MS.gene005297:CDS | 30.0% | |
| AAGAGTAACTGATAAGCAAA+AGG | + | chr1.1:62120494-62120513 | MS.gene005297:CDS | 30.0% | |
| AATTATCATTATCTCCTACG+AGG | + | chr1.1:62120826-62120845 | MS.gene005297:CDS | 30.0% | |
| AGGGATATGTTGAATTTGAA+TGG | + | chr1.1:62120249-62120268 | MS.gene005297:CDS | 30.0% | |
| ATATACTTCTTCATCTTGCA+TGG | - | chr1.1:62121830-62121849 | None:intergenic | 30.0% | |
| ATATCTACAGAAGAGAAGAA+TGG | - | chr1.1:62121275-62121294 | None:intergenic | 30.0% | |
| ATGGAGAAAAGAAGTTACAA+GGG | + | chr1.1:62119064-62119083 | MS.gene005297:CDS | 30.0% | |
| CACCTGAATATAAGATGAAT+TGG | + | chr1.1:62121875-62121894 | MS.gene005297:CDS | 30.0% | |
| CGAGAGATTCAGAAAATAAT+AGG | + | chr1.1:62120163-62120182 | MS.gene005297:CDS | 30.0% | |
| GATGGAACTTGAATATGTAA+AGG | + | chr1.1:62121930-62121949 | MS.gene005297:CDS | 30.0% | |
| GCAAAATTATTCTTATCAGC+TGG | + | chr1.1:62121567-62121586 | MS.gene005297:intron | 30.0% | |
| TAAGAATGCAGCATATTTAG+AGG | + | chr1.1:62119963-62119982 | MS.gene005297:CDS | 30.0% | |
| TAAGTGACAACATAATGAAG+TGG | - | chr1.1:62119752-62119771 | None:intergenic | 30.0% | |
| TACAAAATCATCAAGGATGA+TGG | + | chr1.1:62121912-62121931 | MS.gene005297:CDS | 30.0% | |
| TCACTTAGATTCCTTAAACA+TGG | + | chr1.1:62119765-62119784 | MS.gene005297:CDS | 30.0% | |
| TCTAAATATGCTGCATTCTT+AGG | - | chr1.1:62119964-62119983 | None:intergenic | 30.0% | |
| TTACATTTACATCTCCATTG+AGG | + | chr1.1:62120700-62120719 | MS.gene005297:CDS | 30.0% | |
| TTTCATCAGCAAAAGTAACT+TGG | + | chr1.1:62121392-62121411 | MS.gene005297:CDS | 30.0% | |
| ! | ACTTGTTAAGAAGCCTAAAA+AGG | - | chr1.1:62119513-62119532 | None:intergenic | 30.0% |
| ! | ATACTAACATGGCTTTTGAT+AGG | - | chr1.1:62119937-62119956 | None:intergenic | 30.0% |
| ! | ATGAATTGGTTTCTGATTTG+TGG | + | chr1.1:62122376-62122395 | MS.gene005297:CDS | 30.0% |
| ! | ATTAGTAGTGATGATGATGA+AGG | + | chr1.1:62119661-62119680 | MS.gene005297:CDS | 30.0% |
| ! | TGAGATATGTTTTTCCTCAA+TGG | - | chr1.1:62120717-62120736 | None:intergenic | 30.0% |
| ! | TTAGTAGTGATGATGATGAA+GGG | + | chr1.1:62119662-62119681 | MS.gene005297:CDS | 30.0% |
| ! | TTCTTTTCATCACGTTGATA+AGG | + | chr1.1:62120791-62120810 | MS.gene005297:CDS | 30.0% |
| !! | AAATTCCAAGCCATTTTCAA+AGG | - | chr1.1:62122328-62122347 | None:intergenic | 30.0% |
| !!! | AAGTTACTTTTGCTGATGAA+AGG | - | chr1.1:62121393-62121412 | None:intergenic | 30.0% |
| AAAGGTTGACAAAATCACAC+TGG | - | chr1.1:62119320-62119339 | None:intergenic | 35.0% | |
| AATGCATGGAATTAAGATGC+AGG | + | chr1.1:62122106-62122125 | MS.gene005297:CDS | 35.0% | |
| AATGTGCCTCAGAAATAGAA+CGG | + | chr1.1:62120907-62120926 | MS.gene005297:CDS | 35.0% | |
| ACTCAGCAATGTAGAATTGA+TGG | + | chr1.1:62121957-62121976 | MS.gene005297:CDS | 35.0% | |
| AGAAGACAGATTTAACAGCA+TGG | + | chr1.1:62120956-62120975 | MS.gene005297:CDS | 35.0% | |
| AGATGTTTCAAACCATGCAA+AGG | + | chr1.1:62119258-62119277 | MS.gene005297:intron | 35.0% | |
| AGGACGATAACAAACAAATG+CGG | + | chr1.1:62120435-62120454 | MS.gene005297:CDS | 35.0% | |
| ATATAGCATGACAGAAAGCA+GGG | + | chr1.1:62120665-62120684 | MS.gene005297:CDS | 35.0% | |
| ATCAGTTAGTCAAAGAGATG+AGG | + | chr1.1:62121219-62121238 | MS.gene005297:intron | 35.0% | |
| CAGATAAAGATGGATGACAA+TGG | + | chr1.1:62119586-62119605 | MS.gene005297:intron | 35.0% | |
| GAAAATAATAGGTCTTGCCT+AGG | + | chr1.1:62120174-62120193 | MS.gene005297:CDS | 35.0% | |
| GAACCAAAGGCTCATAAAAT+GGG | + | chr1.1:62119823-62119842 | MS.gene005297:CDS | 35.0% | |
| GAACCTGCTTAGTGATAAAT+TGG | + | chr1.1:62121019-62121038 | MS.gene005297:CDS | 35.0% | |
| GATGTTTCAAACCATGCAAA+GGG | + | chr1.1:62119259-62119278 | MS.gene005297:intron | 35.0% | |
| TATCACAATCCTAACTTACC+TGG | + | chr1.1:62119139-62119158 | MS.gene005297:CDS | 35.0% | |
| TATTATCCTTGGCAACTTTC+TGG | + | chr1.1:62121195-62121214 | MS.gene005297:intron | 35.0% | |
| TCGTGCTAACAAATTCTGTA+AGG | - | chr1.1:62119538-62119557 | None:intergenic | 35.0% | |
| TCTCAAGGTTATTCAAAGCA+TGG | - | chr1.1:62121541-62121560 | None:intergenic | 35.0% | |
| TCTGTAGATATCAGAACCAA+TGG | + | chr1.1:62121284-62121303 | MS.gene005297:intron | 35.0% | |
| TCTTAGGCTTCATACTAACA+TGG | - | chr1.1:62119948-62119967 | None:intergenic | 35.0% | |
| TCTTGATCTGCAAGAGAAAT+TGG | + | chr1.1:62120074-62120093 | MS.gene005297:CDS | 35.0% | |
| TCTTTGATCTGTTGGAGAAT+CGG | + | chr1.1:62122013-62122032 | MS.gene005297:CDS | 35.0% | |
| TGAACCAAAGGCTCATAAAA+TGG | + | chr1.1:62119822-62119841 | MS.gene005297:CDS | 35.0% | |
| TGAATCTCTCGAAACTTTGA+AGG | - | chr1.1:62120154-62120173 | None:intergenic | 35.0% | |
| TGACTTAAGAGCCATGTTTA+AGG | - | chr1.1:62119779-62119798 | None:intergenic | 35.0% | |
| TGTGCTCCTCATATATAGTT+GGG | - | chr1.1:62120016-62120035 | None:intergenic | 35.0% | |
| TTGTGATACCATTGAACCAA+AGG | + | chr1.1:62119810-62119829 | MS.gene005297:CDS | 35.0% | |
| TTGTGCTCCTCATATATAGT+TGG | - | chr1.1:62120017-62120036 | None:intergenic | 35.0% | |
| TTTCAATGTTTCCCTTTGCA+TGG | - | chr1.1:62119273-62119292 | None:intergenic | 35.0% | |
| ! | AAGCAGATTTTCCTTTACCT+AGG | - | chr1.1:62120194-62120213 | None:intergenic | 35.0% |
| ! | CAGAAGTGTAAAGACAATCA+AGG | - | chr1.1:62121452-62121471 | None:intergenic | 35.0% |
| ! | GACATTGAAGCCTTTGAAAA+TGG | + | chr1.1:62122315-62122334 | MS.gene005297:CDS | 35.0% |
| ! | TAATTTTGCAGCATGTCTCA+AGG | - | chr1.1:62121556-62121575 | None:intergenic | 35.0% |
| ! | TCTGGCCATTACAATTTTTC+TGG | - | chr1.1:62120314-62120333 | None:intergenic | 35.0% |
| ! | TGAAGTTGATTTACCTTTGC+TGG | - | chr1.1:62120358-62120377 | None:intergenic | 35.0% |
| ! | TTCGGAAGAACTCTTTCTTT+TGG | - | chr1.1:62120532-62120551 | None:intergenic | 35.0% |
| ! | TTTATGAGCCTTTGGTTCAA+TGG | - | chr1.1:62119821-62119840 | None:intergenic | 35.0% |
| ! | TTTCCCATTTTATGAGCCTT+TGG | - | chr1.1:62119829-62119848 | None:intergenic | 35.0% |
| !! | ACAGGTTTGTGTTGACTTAT+TGG | - | chr1.1:62120391-62120410 | None:intergenic | 35.0% |
| !! | ATATAACTTGCTCCTCATCT+TGG | - | chr1.1:62120118-62120137 | None:intergenic | 35.0% |
| AAATTGGAAACAGCGCAACA+CGG | + | chr1.1:62120090-62120109 | MS.gene005297:CDS | 40.0% | |
| AATAGGTCTTGCCTAGGTAA+AGG | + | chr1.1:62120180-62120199 | MS.gene005297:CDS | 40.0% | |
| AGAGTTCTTCCGAAAAGAAG+AGG | + | chr1.1:62120538-62120557 | MS.gene005297:CDS | 40.0% | |
| AGCGTCGTTATAAAACATGC+AGG | - | chr1.1:62121659-62121678 | None:intergenic | 40.0% | |
| AGTTAGTCAAAGAGATGAGG+AGG | + | chr1.1:62121222-62121241 | MS.gene005297:intron | 40.0% | |
| CAAGTCCCCAACTATATATG+AGG | + | chr1.1:62120007-62120026 | MS.gene005297:CDS | 40.0% | |
| CATATAGCATGACAGAAAGC+AGG | + | chr1.1:62120664-62120683 | MS.gene005297:CDS | 40.0% | |
| CATATCCCTACTTTGAACCT+CGG | - | chr1.1:62120238-62120257 | None:intergenic | 40.0% | |
| CATGGTATGCAACACATCAA+GGG | + | chr1.1:62120974-62120993 | MS.gene005297:CDS | 40.0% | |
| CATTCCGATCAAAGAAGCTA+AGG | - | chr1.1:62119096-62119115 | None:intergenic | 40.0% | |
| CGTCGTTATAAAACATGCAG+GGG | - | chr1.1:62121657-62121676 | None:intergenic | 40.0% | |
| CTTATCAGTTACTCTTGTGC+TGG | - | chr1.1:62120490-62120509 | None:intergenic | 40.0% | |
| GAAATAGAACGGTGTTCTGT+TGG | + | chr1.1:62120918-62120937 | MS.gene005297:CDS | 40.0% | |
| GATAGTGAAGATAGCACATG+TGG | + | chr1.1:62121414-62121433 | MS.gene005297:CDS | 40.0% | |
| GCGTCGTTATAAAACATGCA+GGG | - | chr1.1:62121658-62121677 | None:intergenic | 40.0% | |
| GCTTCCTTAGCTTCTTTGAT+CGG | + | chr1.1:62119089-62119108 | MS.gene005297:CDS | 40.0% | |
| GGATGTATGTATTTGTGCAG+AGG | - | chr1.1:62121745-62121764 | None:intergenic | 40.0% | |
| GTGACAACATAATGAAGTGG+AGG | - | chr1.1:62119749-62119768 | None:intergenic | 40.0% | |
| GTGCTCCTCATATATAGTTG+GGG | - | chr1.1:62120015-62120034 | None:intergenic | 40.0% | |
| GTTGACTACTAAGCAAGTGA+TGG | + | chr1.1:62120743-62120762 | MS.gene005297:CDS | 40.0% | |
| TAGTGATAAATTGGGCAGCA+TGG | + | chr1.1:62121028-62121047 | MS.gene005297:CDS | 40.0% | |
| TCACTCCTTGCAATATCACT+AGG | - | chr1.1:62119619-62119638 | None:intergenic | 40.0% | |
| TCCAACAGATCAAAGAGAGT+TGG | - | chr1.1:62122009-62122028 | None:intergenic | 40.0% | |
| TCCATTACATGTAACCTCGT+AGG | - | chr1.1:62120843-62120862 | None:intergenic | 40.0% | |
| TCCTACGAGGTTACATGTAA+TGG | + | chr1.1:62120839-62120858 | MS.gene005297:CDS | 40.0% | |
| TCTGCTGCCTCCTAAAAAAA+GGG | - | chr1.1:62121797-62121816 | None:intergenic | 40.0% | |
| TGAAATCATGCCAATGTCAC+AGG | + | chr1.1:62119288-62119307 | MS.gene005297:CDS | 40.0% | |
| TGACTGTGTAAGTGAATGCA+TGG | + | chr1.1:62122092-62122111 | MS.gene005297:CDS | 40.0% | |
| TGCAGATCAAGAGTTCTCAA+GGG | - | chr1.1:62120066-62120085 | None:intergenic | 40.0% | |
| TGCCCAATTTATCACTAAGC+AGG | - | chr1.1:62121025-62121044 | None:intergenic | 40.0% | |
| TTACAGCTTCGATCTTCCAT+TGG | - | chr1.1:62121303-62121322 | None:intergenic | 40.0% | |
| TTGCAGATCAAGAGTTCTCA+AGG | - | chr1.1:62120067-62120086 | None:intergenic | 40.0% | |
| ! | AGAAGTGTACAAGGAGATGT+CGG | + | chr1.1:62122206-62122225 | MS.gene005297:CDS | 40.0% |
| ! | CTAAGCAAGTGATGGAAACA+AGG | + | chr1.1:62120751-62120770 | MS.gene005297:CDS | 40.0% |
| ! | GCAGGCAAGTTTTTGTTGAA+AGG | + | chr1.1:62122124-62122143 | MS.gene005297:CDS | 40.0% |
| ! | GTTAGCAGAAGAAGTGTACA+AGG | + | chr1.1:62122197-62122216 | MS.gene005297:CDS | 40.0% |
| ! | GTTTAGAAGCATGGAAGAAG+AGG | + | chr1.1:62122230-62122249 | MS.gene005297:CDS | 40.0% |
| ! | TGAAGCCTTTGAAAATGGCT+TGG | + | chr1.1:62122320-62122339 | MS.gene005297:CDS | 40.0% |
| ! | TGATGATGAAGGGTGTGATA+AGG | + | chr1.1:62119672-62119691 | MS.gene005297:CDS | 40.0% |
| ! | TTGTTGAAAGGTGCAAAGCA+TGG | + | chr1.1:62122136-62122155 | MS.gene005297:CDS | 40.0% |
| !! | AGAACACCGTTCTATTTCTG+AGG | - | chr1.1:62120916-62120935 | None:intergenic | 40.0% |
| !! | TCTATTTCTGAGGCACATTG+AGG | - | chr1.1:62120906-62120925 | None:intergenic | 40.0% |
| !! | TTTGCTGGTTTGCCTAAGAA+CGG | - | chr1.1:62120343-62120362 | None:intergenic | 40.0% |
| AAGCATGGAAGAAGAGGTGA+TGG | + | chr1.1:62122236-62122255 | MS.gene005297:CDS | 45.0% | |
| AAGGACATGAGCACTCCATT+GGG | + | chr1.1:62122276-62122295 | MS.gene005297:CDS | 45.0% | |
| AAGTCAAGCCATCTACCCAA+TGG | - | chr1.1:62122294-62122313 | None:intergenic | 45.0% | |
| CAATGCCGAGGTTCAAAGTA+GGG | + | chr1.1:62120230-62120249 | MS.gene005297:CDS | 45.0% | |
| CATCAGTGATGAGGAAAGGT+TGG | + | chr1.1:62122175-62122194 | MS.gene005297:CDS | 45.0% | |
| CTCTGCTGCCTCCTAAAAAA+AGG | - | chr1.1:62121798-62121817 | None:intergenic | 45.0% | |
| CTGGTGTTTACCTGTGACAT+TGG | - | chr1.1:62119301-62119320 | None:intergenic | 45.0% | |
| GATGTCGGAGTTTAGAAGCA+TGG | + | chr1.1:62122221-62122240 | MS.gene005297:CDS | 45.0% | |
| GCATGGTATGCAACACATCA+AGG | + | chr1.1:62120973-62120992 | MS.gene005297:CDS | 45.0% | |
| GCCAACTCTCTTTGATCTGT+TGG | + | chr1.1:62122005-62122024 | MS.gene005297:CDS | 45.0% | |
| GTTCTTAGGCAAACCAGCAA+AGG | + | chr1.1:62120342-62120361 | MS.gene005297:CDS | 45.0% | |
| TGAATCCAAACCCATGAGTC+TGG | - | chr1.1:62119713-62119732 | None:intergenic | 45.0% | |
| TGGCATGAATCAGCAACTTC+AGG | + | chr1.1:62121088-62121107 | MS.gene005297:CDS | 45.0% | |
| ! | AGGAGCACAATGTCTTCAGT+TGG | + | chr1.1:62120027-62120046 | MS.gene005297:CDS | 45.0% |
| ! | CTGATCACGCCTCTTCTTTT+CGG | - | chr1.1:62120550-62120569 | None:intergenic | 45.0% |
| ! | GAAATGGGTTTAGCAGACCT+TGG | - | chr1.1:62119889-62119908 | None:intergenic | 45.0% |
| ! | GGTCGAACTTTCTGAAGAAC+AGG | - | chr1.1:62120409-62120428 | None:intergenic | 45.0% |
| !! | ATTTCTGAGGCACATTGAGG+TGG | - | chr1.1:62120903-62120922 | None:intergenic | 45.0% |
| !! | TTTCTGAGGCACATTGAGGT+GGG | - | chr1.1:62120902-62120921 | None:intergenic | 45.0% |
| !! | AAAAAATTAAAAGAAAAAAA+TGG | - | chr1.1:62119361-62119380 | None:intergenic | 5.0% |
| !!! | TTTTTTCTTTTAATTTTTTA+TGG | + | chr1.1:62119362-62119381 | MS.gene005297:intron | 5.0% |
| ACTGATGCCACCATGCATCT+AGG | - | chr1.1:62122162-62122181 | None:intergenic | 50.0% | |
| AGTAGCCAGACTCATGGGTT+TGG | + | chr1.1:62119705-62119724 | MS.gene005297:CDS | 50.0% | |
| CAAAGCATGGCCTAGATGCA+TGG | + | chr1.1:62122149-62122168 | MS.gene005297:CDS | 50.0% | |
| CAAGGACATGAGCACTCCAT+TGG | + | chr1.1:62122275-62122294 | MS.gene005297:CDS | 50.0% | |
| CCAATGCCGAGGTTCAAAGT+AGG | + | chr1.1:62120229-62120248 | MS.gene005297:CDS | 50.0% | |
| CCTACTTTGAACCTCGGCAT+TGG | - | chr1.1:62120232-62120251 | None:intergenic | 50.0% | |
| CTGATGCCAGAAAGTTGCCA+AGG | - | chr1.1:62121204-62121223 | None:intergenic | 50.0% | |
| CTGTTGGAGAATCGGAGAAC+TGG | + | chr1.1:62122021-62122040 | MS.gene005297:CDS | 50.0% | |
| GTGGCATCAGTGATGAGGAA+AGG | + | chr1.1:62122171-62122190 | MS.gene005297:CDS | 50.0% | |
| TGAGCACTCCATTGGGTAGA+TGG | + | chr1.1:62122283-62122302 | MS.gene005297:CDS | 50.0% | |
| TGTAACACCATCCAATGCCG+AGG | + | chr1.1:62120218-62120237 | MS.gene005297:CDS | 50.0% | |
| ! | CATGGAAGAAGAGGTGATGG+TGG | + | chr1.1:62122239-62122258 | MS.gene005297:CDS | 50.0% |
| ! | CTTTGAACCTCGGCATTGGA+TGG | - | chr1.1:62120228-62120247 | None:intergenic | 50.0% |
| !! | GGCATCTGCTAAGAGCATTG+AGG | + | chr1.1:62119984-62120003 | MS.gene005297:CDS | 50.0% |
| !! | GGTGGATGAGCTTGTTAGCA+AGG | + | chr1.1:62122257-62122276 | MS.gene005297:CDS | 50.0% |
| !! | GTTTGTTATCGTCCTAGCGC+TGG | - | chr1.1:62120430-62120449 | None:intergenic | 50.0% |
| AGCATGGCCTAGATGCATGG+TGG | + | chr1.1:62122152-62122171 | MS.gene005297:CDS | 55.0% | |
| ATGAGTCTGGCTACTAGCCC+TGG | - | chr1.1:62119700-62119719 | None:intergenic | 55.0% | |
| CAGAAAGTTCGACCAGCGCT+AGG | + | chr1.1:62120415-62120434 | MS.gene005297:CDS | 55.0% | |
| CGCAACACGGAACCAAGATG+AGG | + | chr1.1:62120103-62120122 | MS.gene005297:CDS | 55.0% | |
| CGTGATCAGAATGACGCACG+AGG | + | chr1.1:62120561-62120580 | MS.gene005297:CDS | 55.0% | |
| GCATGGTGGCATCAGTGATG+AGG | + | chr1.1:62122166-62122185 | MS.gene005297:CDS | 55.0% | |
| GCCAGAACAGCACCGTTCTT+AGG | + | chr1.1:62120328-62120347 | MS.gene005297:CDS | 55.0% | |
| GGAGAATCGGAGAACTGGTG+TGG | + | chr1.1:62122026-62122045 | MS.gene005297:CDS | 55.0% | |
| TGAGTCTGGCTACTAGCCCT+GGG | - | chr1.1:62119699-62119718 | None:intergenic | 55.0% | |
| ! | AAGGGTGTGATAAGGCCCCA+GGG | + | chr1.1:62119680-62119699 | MS.gene005297:CDS | 55.0% |
| ! | AGGGCTAGTAGCCAGACTCA+TGG | + | chr1.1:62119699-62119718 | MS.gene005297:CDS | 55.0% |
| ! | GGGCTAGTAGCCAGACTCAT+GGG | + | chr1.1:62119700-62119719 | MS.gene005297:CDS | 55.0% |
| !! | GCCTAAGAACGGTGCTGTTC+TGG | - | chr1.1:62120332-62120351 | None:intergenic | 55.0% |
| GAGTCTGGCTACTAGCCCTG+GGG | - | chr1.1:62119698-62119717 | None:intergenic | 60.0% | |
| ! | GAAGGGTGTGATAAGGCCCC+AGG | + | chr1.1:62119679-62119698 | MS.gene005297:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 62119064 | 62122407 | 62119064 | ID=MS.gene005297 |
| chr1.1 | mRNA | 62119064 | 62122407 | 62119064 | ID=MS.gene005297.t1;Parent=MS.gene005297 |
| chr1.1 | exon | 62119064 | 62119160 | 62119064 | ID=MS.gene005297.t1.exon1;Parent=MS.gene005297.t1 |
| chr1.1 | CDS | 62119064 | 62119160 | 62119064 | ID=cds.MS.gene005297.t1;Parent=MS.gene005297.t1 |
| chr1.1 | exon | 62119260 | 62119321 | 62119260 | ID=MS.gene005297.t1.exon2;Parent=MS.gene005297.t1 |
| chr1.1 | CDS | 62119260 | 62119321 | 62119260 | ID=cds.MS.gene005297.t1;Parent=MS.gene005297.t1 |
| chr1.1 | exon | 62119589 | 62121109 | 62119589 | ID=MS.gene005297.t1.exon3;Parent=MS.gene005297.t1 |
| chr1.1 | CDS | 62119589 | 62121109 | 62119589 | ID=cds.MS.gene005297.t1;Parent=MS.gene005297.t1 |
| chr1.1 | exon | 62121291 | 62121435 | 62121291 | ID=MS.gene005297.t1.exon4;Parent=MS.gene005297.t1 |
| chr1.1 | CDS | 62121291 | 62121435 | 62121291 | ID=cds.MS.gene005297.t1;Parent=MS.gene005297.t1 |
| chr1.1 | exon | 62121806 | 62122407 | 62121806 | ID=MS.gene005297.t1.exon5;Parent=MS.gene005297.t1 |
| chr1.1 | CDS | 62121806 | 62122407 | 62121806 | ID=cds.MS.gene005297.t1;Parent=MS.gene005297.t1 |
| Gene Sequence |
| Protein sequence |
