Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050756.t1 | XP_013450452.1 | 91.1 | 637 | 54 | 2 | 1 | 636 | 1 | 635 | 4.20E-298 | 1033.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050756.t1 | A0A072UFB2 | 91.1 | 637 | 54 | 2 | 1 | 636 | 1 | 635 | 3.0e-298 | 1033.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050755 | MS.gene050756 | 0.865142 | 7.32E-65 | -1.69E-46 |
| MS.gene050756 | MS.gene23133 | 0.86118 | 1.23E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene40803 | MS.gene050756 | PPI |
| MS.gene44175 | MS.gene050756 | PPI |
| MS.gene050756 | MS.gene050959 | PPI |
| MS.gene005297 | MS.gene050756 | PPI |
| MS.gene072558 | MS.gene050756 | PPI |
| MS.gene050756 | MS.gene054400 | PPI |
| MS.gene45026 | MS.gene050756 | PPI |
| MS.gene054400 | MS.gene050756 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050756.t1 | MTR_7g112030 | 94.505 | 637 | 32 | 2 | 1 | 636 | 1 | 635 | 0.0 | 1217 |
| MS.gene050756.t1 | MTR_1g083850 | 43.002 | 593 | 233 | 17 | 55 | 636 | 1 | 499 | 6.38e-109 | 345 |
| MS.gene050756.t1 | MTR_2g034810 | 35.207 | 605 | 328 | 18 | 2 | 568 | 6 | 584 | 1.32e-70 | 246 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050756.t1 | AT5G26910 | 33.165 | 594 | 335 | 12 | 1 | 586 | 4 | 543 | 3.96e-66 | 229 |
| MS.gene050756.t1 | AT5G26910 | 33.165 | 594 | 335 | 12 | 1 | 586 | 4 | 543 | 2.95e-64 | 228 |
| MS.gene050756.t1 | AT5G26910 | 33.165 | 594 | 335 | 12 | 1 | 586 | 4 | 543 | 2.95e-64 | 228 |
| MS.gene050756.t1 | AT5G26910 | 33.165 | 594 | 334 | 12 | 1 | 586 | 4 | 542 | 5.75e-63 | 224 |
| MS.gene050756.t1 | AT3G58650 | 34.466 | 618 | 310 | 26 | 1 | 600 | 4 | 544 | 2.11e-61 | 219 |
| MS.gene050756.t1 | AT3G05750 | 34.057 | 599 | 324 | 20 | 1 | 585 | 7 | 548 | 2.42e-52 | 193 |
| MS.gene050756.t1 | AT3G05750 | 34.496 | 516 | 274 | 18 | 77 | 585 | 82 | 540 | 1.77e-49 | 185 |
| MS.gene050756.t1 | AT3G05750 | 33.466 | 502 | 270 | 18 | 91 | 585 | 1 | 445 | 5.93e-43 | 165 |
| MS.gene050756.t1 | AT3G05750 | 33.466 | 502 | 270 | 18 | 91 | 585 | 1 | 445 | 5.93e-43 | 165 |
Find 0 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAGCTAAAAACATATTA+TGG | + | 51761:585-604 | None:intergenic | 15.0% |
| !!! | ATTGAAATTGTTTTAGATAA+AGG | - | 51761:960-979 | MS.gene050756:CDS | 15.0% |
| !!! | TTTGATTTATTTTTTTGGTT+TGG | - | 51761:935-954 | MS.gene050756:CDS | 15.0% |
| !! | TATTCTCATTTAACAAGTAA+AGG | - | 51761:1705-1724 | MS.gene050756:CDS | 20.0% |
| !!! | AAATATTATGTGTTTTGGAT+GGG | + | 51761:2133-2152 | None:intergenic | 20.0% |
| !!! | AGTTGTAAAATTGCATTTTA+TGG | + | 51761:2237-2256 | None:intergenic | 20.0% |
| !!! | TTGAGAAATATTATGTGTTT+TGG | + | 51761:2138-2157 | None:intergenic | 20.0% |
| ! | AAATCATTTCTTTCATGATC+AGG | + | 51761:2203-2222 | None:intergenic | 25.0% |
| ! | ATAGCTTACACGAAAATATT+TGG | - | 51761:642-661 | MS.gene050756:CDS | 25.0% |
| ! | GAATAATATATGACCATGTT+TGG | + | 51761:741-760 | None:intergenic | 25.0% |
| ! | TATGTAAGTTTATCCAAACA+TGG | - | 51761:725-744 | MS.gene050756:CDS | 25.0% |
| ! | TTAACAAGTAAAGGAAAATC+AGG | - | 51761:1714-1733 | MS.gene050756:CDS | 25.0% |
| ! | TTCAAATCAAGAATTCTCAA+GGG | + | 51761:1516-1535 | None:intergenic | 25.0% |
| ! | TTTCAAATCAAGAATTCTCA+AGG | + | 51761:1517-1536 | None:intergenic | 25.0% |
| !! | AAATGCAATTTTACAACTGA+TGG | - | 51761:2239-2258 | MS.gene050756:intron | 25.0% |
| !! | ATTTAGAATTCCAATCAAAC+AGG | + | 51761:322-341 | None:intergenic | 25.0% |
| !! | GTAACAGAAACATTTAGAAT+AGG | + | 51761:787-806 | None:intergenic | 25.0% |
| !!! | AATATTATGTGTTTTGGATG+GGG | + | 51761:2132-2151 | None:intergenic | 25.0% |
| !!! | ATAGCAATAATTTTTTGGGA+TGG | + | 51761:2433-2452 | None:intergenic | 25.0% |
| !!! | GAAATATTATGTGTTTTGGA+TGG | + | 51761:2134-2153 | None:intergenic | 25.0% |
| !!! | GAAATTGTTTTAGATAAAGG+TGG | - | 51761:963-982 | MS.gene050756:CDS | 25.0% |
| !!! | GGAGATAGCAATAATTTTTT+GGG | + | 51761:2437-2456 | None:intergenic | 25.0% |
| !!! | TTTTGAAGTTGATTTACCTT+TGG | + | 51761:1964-1983 | None:intergenic | 25.0% |
| AAAACTCTATTCCTCGTATA+TGG | + | 51761:1471-1490 | None:intergenic | 30.0% | |
| AATAACCTATTGTGAGTAAC+TGG | + | 51761:1357-1376 | None:intergenic | 30.0% | |
| AGAAAACCATTACTCTTGAT+TGG | + | 51761:1384-1403 | None:intergenic | 30.0% | |
| AGAGATACAATGGTTTCAAA+TGG | - | 51761:1774-1793 | MS.gene050756:CDS | 30.0% | |
| ATGATTAACATTACCAGGTA+AGG | + | 51761:375-394 | None:intergenic | 30.0% | |
| ATGGAGAAAAAACGTTCAAA+AGG | - | 51761:284-303 | MS.gene050756:CDS | 30.0% | |
| CAAAATAGTATGACTTCCAA+AGG | - | 51761:1945-1964 | MS.gene050756:CDS | 30.0% | |
| CAATGGTTTCAAATGGAAAT+AGG | - | 51761:1781-1800 | MS.gene050756:CDS | 30.0% | |
| CATGCTTCTCATTATAATGA+GGG | - | 51761:1162-1181 | MS.gene050756:CDS | 30.0% | |
| TCAAATAAGTCAAACCAAAC+AGG | + | 51761:494-513 | None:intergenic | 30.0% | |
| TCACTATCTATCATATGTGT+CGG | + | 51761:2458-2477 | None:intergenic | 30.0% | |
| TCATGCTTCTCATTATAATG+AGG | - | 51761:1161-1180 | MS.gene050756:CDS | 30.0% | |
| ! | AAAGGTACATCATCATTCAA+GGG | - | 51761:1645-1664 | MS.gene050756:CDS | 30.0% |
| ! | ATAATGAGAAGCATGAAAGT+TGG | + | 51761:1157-1176 | None:intergenic | 30.0% |
| ! | TCTTGATTTGAAAGAGAGAT+TGG | - | 51761:1524-1543 | MS.gene050756:CDS | 30.0% |
| ! | TGGTTTGACTTAATCTCATT+CGG | + | 51761:1828-1847 | None:intergenic | 30.0% |
| !! | AAACCAAACAGGTTCTAAAT+AGG | + | 51761:483-502 | None:intergenic | 30.0% |
| !! | AGGAGTTCTAATTTTGACAA+AGG | - | 51761:1627-1646 | MS.gene050756:CDS | 30.0% |
| !! | ATATTATGTGTTTTGGATGG+GGG | + | 51761:2131-2150 | None:intergenic | 30.0% |
| !! | TGTTTGGTTTGACTTATTTG+AGG | - | 51761:493-512 | MS.gene050756:CDS | 30.0% |
| !!! | CGGAGATAGCAATAATTTTT+TGG | + | 51761:2438-2457 | None:intergenic | 30.0% |
| AAAAAGCAGACAGCAAAAAG+TGG | + | 51761:895-914 | None:intergenic | 35.0% | |
| AAAAGCAGACAGCAAAAAGT+GGG | + | 51761:894-913 | None:intergenic | 35.0% | |
| AACTCTTCAAATTGTAAGCC+TGG | - | 51761:1600-1619 | MS.gene050756:CDS | 35.0% | |
| AAGCTATCTTGTAGAGCTTA+TGG | + | 51761:609-628 | None:intergenic | 35.0% | |
| ACCCTATAGAACTTTGATTC+CGG | + | 51761:859-878 | None:intergenic | 35.0% | |
| ACCGGAATCAAAGTTCTATA+GGG | - | 51761:855-874 | MS.gene050756:CDS | 35.0% | |
| AGGCTTACAATTTGAAGAGT+TGG | + | 51761:1601-1620 | None:intergenic | 35.0% | |
| ATAGAACTTTGATTCCGGTA+AGG | + | 51761:854-873 | None:intergenic | 35.0% | |
| ATGGAAACCAGAACTAGATT+TGG | - | 51761:2377-2396 | MS.gene050756:intron | 35.0% | |
| ATGGCATGATTAACATTACC+AGG | + | 51761:380-399 | None:intergenic | 35.0% | |
| ATGTCAATGTTCAGCCTAAA+AGG | - | 51761:2069-2088 | MS.gene050756:intron | 35.0% | |
| ATTACATGAGCTGCATTCTT+CGG | + | 51761:1411-1430 | None:intergenic | 35.0% | |
| CTATTGTGAGTAACTGGAAT+GGG | + | 51761:1351-1370 | None:intergenic | 35.0% | |
| CTTAAACACACCACTTAAGT+CGG | - | 51761:1224-1243 | MS.gene050756:CDS | 35.0% | |
| GAACATTTCATCTTGTTCCA+TGG | + | 51761:2627-2646 | None:intergenic | 35.0% | |
| GTTTCTTTAGCCTGTTTGAT+TGG | - | 51761:309-328 | MS.gene050756:CDS | 35.0% | |
| TACCGGAATCAAAGTTCTAT+AGG | - | 51761:854-873 | MS.gene050756:CDS | 35.0% | |
| TAGATAAAGGTGGATGAGAA+TGG | - | 51761:973-992 | MS.gene050756:CDS | 35.0% | |
| TATGGTTAACACCAATACCA+TGG | - | 51761:2607-2626 | MS.gene050756:intron | 35.0% | |
| TCATCAGTTTGTAGTGATGA+GGG | - | 51761:1030-1049 | MS.gene050756:CDS | 35.0% | |
| TCATCTTCAGAAAGTTCTAC+TGG | - | 51761:2014-2033 | MS.gene050756:CDS | 35.0% | |
| TTCATCAGTTTGTAGTGATG+AGG | - | 51761:1029-1048 | MS.gene050756:CDS | 35.0% | |
| TTCATCTTGTTCCATGGTAT+TGG | + | 51761:2621-2640 | None:intergenic | 35.0% | |
| TTGAAGAGTTGGCATTGTTT+GGG | + | 51761:1590-1609 | None:intergenic | 35.0% | |
| TTGTCTCCAATCAAGAGTAA+TGG | - | 51761:1375-1394 | MS.gene050756:CDS | 35.0% | |
| TTTGAAGAGTTGGCATTGTT+TGG | + | 51761:1591-1610 | None:intergenic | 35.0% | |
| TTTGGATTCTTTGCCAACTT+CGG | - | 51761:1095-1114 | MS.gene050756:CDS | 35.0% | |
| ! | AAGAAAAAGTATGACAGCAG+AGG | - | 51761:2158-2177 | MS.gene050756:CDS | 35.0% |
| ! | CAAAGGTACATCATCATTCA+AGG | - | 51761:1644-1663 | MS.gene050756:CDS | 35.0% |
| ! | TTTGAAATCTCTTGAGTGAC+TGG | + | 51761:1299-1318 | None:intergenic | 35.0% |
| !! | ACGAGGAATAGAGTTTTATC+AGG | - | 51761:1474-1493 | MS.gene050756:CDS | 35.0% |
| !! | AGGAATAGAGTTTTATCAGG+CGG | - | 51761:1477-1496 | MS.gene050756:CDS | 35.0% |
| !! | TCTGCTTTGAACGTTGTTTT+TGG | + | 51761:1757-1776 | None:intergenic | 35.0% |
| !!! | TTGTTTTTGGCTTGCATTGT+AGG | + | 51761:1744-1763 | None:intergenic | 35.0% |
| AAAACGTGTGCAAACCGTAA+TGG | - | 51761:1894-1913 | MS.gene050756:CDS | 40.0% | |
| AAAGCAGACAGCAAAAAGTG+GGG | + | 51761:893-912 | None:intergenic | 40.0% | |
| AAATTAGAACTCCTCTCACC+AGG | + | 51761:1621-1640 | None:intergenic | 40.0% | |
| AAGTTCTACTGGAGTCAGAA+AGG | - | 51761:2025-2044 | MS.gene050756:intron | 40.0% | |
| AATCTCGTAAGAAGCTCGTT+TGG | - | 51761:339-358 | MS.gene050756:CDS | 40.0% | |
| AGTCAGAAAGGCAACAAACA+AGG | - | 51761:2037-2056 | MS.gene050756:intron | 40.0% | |
| AGTCCGAGTAATATAGGAAG+TGG | - | 51761:1000-1019 | MS.gene050756:CDS | 40.0% | |
| CATCAACTGCAGAAGTTTCA+AGG | - | 51761:806-825 | MS.gene050756:CDS | 40.0% | |
| CATCAGTTTGTAGTGATGAG+GGG | - | 51761:1031-1050 | MS.gene050756:CDS | 40.0% | |
| CCATTCCAGTTACTCACAAT+AGG | - | 51761:1349-1368 | MS.gene050756:CDS | 40.0% | |
| CCTATTGTGAGTAACTGGAA+TGG | + | 51761:1352-1371 | None:intergenic | 40.0% | |
| CGTTCAAAGCAGAGATACAA+TGG | - | 51761:1764-1783 | MS.gene050756:CDS | 40.0% | |
| CTAGATCTCAAACCAGTAGA+AGG | + | 51761:2566-2585 | None:intergenic | 40.0% | |
| GAAGAATGCAGCTCATGTAA+TGG | - | 51761:1410-1429 | MS.gene050756:CDS | 40.0% | |
| GAAGATGAAACTCGTGTTGT+CGG | + | 51761:2002-2021 | None:intergenic | 40.0% | |
| GGAAAATCTAGAGACCTTAC+CGG | - | 51761:837-856 | MS.gene050756:CDS | 40.0% | |
| GTCAGAAAGGCAACAAACAA+GGG | - | 51761:2038-2057 | MS.gene050756:intron | 40.0% | |
| TAAGTCGGAGAAGTCTTCTT+GGG | - | 51761:1239-1258 | MS.gene050756:CDS | 40.0% | |
| TAGGGCAATCAATAACCGAA+AGG | - | 51761:2100-2119 | MS.gene050756:intron | 40.0% | |
| TATTCCTCGTATATGGCTGA+GGG | + | 51761:1464-1483 | None:intergenic | 40.0% | |
| TCGCCACTTCCTATATTACT+CGG | + | 51761:1006-1025 | None:intergenic | 40.0% | |
| TGAAATGTTGCCTCCAAAGT+CGG | - | 51761:1320-1339 | MS.gene050756:CDS | 40.0% | |
| TGATGCATTGAGTGTCTTGT+TGG | - | 51761:2475-2494 | MS.gene050756:intron | 40.0% | |
| TGGAACAATCAAACCTTACC+TGG | - | 51761:359-378 | MS.gene050756:CDS | 40.0% | |
| TTAAGTCAAACCAGCTCACA+AGG | - | 51761:1835-1854 | MS.gene050756:CDS | 40.0% | |
| TTAAGTCGGAGAAGTCTTCT+TGG | - | 51761:1238-1257 | MS.gene050756:CDS | 40.0% | |
| TTTATGTGCCCTTGATTCCA+TGG | + | 51761:1268-1287 | None:intergenic | 40.0% | |
| ! | ATTAGTCTAGCTACTAACCC+GGG | + | 51761:1072-1091 | None:intergenic | 40.0% |
| ! | CATTAGTCTAGCTACTAACC+CGG | + | 51761:1073-1092 | None:intergenic | 40.0% |
| ! | CCACCTATTTAGAACCTGTT+TGG | - | 51761:477-496 | MS.gene050756:CDS | 40.0% |
| ! | CTCGGTTTGTATTTGGTTTC+TGG | + | 51761:1863-1882 | None:intergenic | 40.0% |
| ! | GGAATCAAGGGCACATAAAA+TGG | - | 51761:1269-1288 | MS.gene050756:CDS | 40.0% |
| ! | GGGTTAGTAGCTAGACTAAT+GGG | - | 51761:1072-1091 | MS.gene050756:CDS | 40.0% |
| ! | GTCAACACCAAATCTAGTTC+TGG | + | 51761:2387-2406 | None:intergenic | 40.0% |
| !! | AGATTTGGTGTTGACTCTCT+TGG | - | 51761:2392-2411 | MS.gene050756:intron | 40.0% |
| !! | AGTAGCTAGACTAATGGGTT+TGG | - | 51761:1077-1096 | MS.gene050756:CDS | 40.0% |
| !! | CCAAACAGGTTCTAAATAGG+TGG | + | 51761:480-499 | None:intergenic | 40.0% |
| !! | GATTTGGTGTTGACTCTCTT+GGG | - | 51761:2393-2412 | MS.gene050756:intron | 40.0% |
| !! | GGAATAGAGTTTTATCAGGC+GGG | - | 51761:1478-1497 | MS.gene050756:CDS | 40.0% |
| !! | GGTATTGGTGTTAACCATAC+TGG | + | 51761:2606-2625 | None:intergenic | 40.0% |
| !! | GGTTCTAAATAGGTGGACAA+AGG | + | 51761:473-492 | None:intergenic | 40.0% |
| !! | TCGACTAGCTTTCTAGACAT+GGG | + | 51761:1567-1586 | None:intergenic | 40.0% |
| !! | TGCTGATTCATGTTAAGCAC+TGG | + | 51761:2701-2720 | None:intergenic | 40.0% |
| AAACCGTAATGGCAATGTGC+TGG | - | 51761:1905-1924 | MS.gene050756:CDS | 45.0% | |
| AACTGCAGAAGTTTCAAGGC+AGG | - | 51761:810-829 | MS.gene050756:CDS | 45.0% | |
| AAGCAGACAGCAAAAAGTGG+GGG | + | 51761:892-911 | None:intergenic | 45.0% | |
| ACTGCAGAAGTTTCAAGGCA+GGG | - | 51761:811-830 | MS.gene050756:CDS | 45.0% | |
| AGAAGTTTCAAGGCAGGGAA+AGG | - | 51761:816-835 | MS.gene050756:CDS | 45.0% | |
| AGCCTAAAAGGTCAAGCTCT+AGG | - | 51761:2081-2100 | MS.gene050756:intron | 45.0% | |
| CAAATTGTAAGCCTGGTGAG+AGG | - | 51761:1607-1626 | MS.gene050756:CDS | 45.0% | |
| CTATCGCTGTTGTTCAAGTG+AGG | - | 51761:2673-2692 | MS.gene050756:CDS | 45.0% | |
| CTATTCCTCGTATATGGCTG+AGG | + | 51761:1465-1484 | None:intergenic | 45.0% | |
| GAAGACTTCTCCGACTTAAG+TGG | + | 51761:1237-1256 | None:intergenic | 45.0% | |
| GAATGCAGCTCATGTAATGG+AGG | - | 51761:1413-1432 | MS.gene050756:CDS | 45.0% | |
| GCCTAAAAGGTCAAGCTCTA+GGG | - | 51761:2082-2101 | MS.gene050756:intron | 45.0% | |
| GCGGCTGCTAAGATAATTGA+TGG | - | 51761:1435-1454 | MS.gene050756:CDS | 45.0% | |
| GGAGCAAGTCCGAGTAATAT+AGG | - | 51761:994-1013 | MS.gene050756:CDS | 45.0% | |
| GTACCAGCACATTGCCATTA+CGG | + | 51761:1911-1930 | None:intergenic | 45.0% | |
| TCAGTGTACCGTAATCTCAG+AGG | - | 51761:2538-2557 | MS.gene050756:intron | 45.0% | |
| TTGGGATGCCATGGAATCAA+GGG | - | 51761:1257-1276 | MS.gene050756:CDS | 45.0% | |
| ! | GCAAGACAAAGCATCCAGTA+TGG | - | 51761:2589-2608 | MS.gene050756:intron | 45.0% |
| ! | GGCAATGCTCGGTTTGTATT+TGG | + | 51761:1870-1889 | None:intergenic | 45.0% |
| ! | TCTGAGATTACGGTACACTG+AGG | + | 51761:2539-2558 | None:intergenic | 45.0% |
| ! | TCTGGTTTCCATCACTTGCT+CGG | + | 51761:2369-2388 | None:intergenic | 45.0% |
| ! | TTTGTAGTGATGAGGGGTGT+GGG | - | 51761:1037-1056 | MS.gene050756:CDS | 45.0% |
| !! | AACTCGTGTTGTCGGCTTAT+TGG | + | 51761:1994-2013 | None:intergenic | 45.0% |
| !! | AGAAGGCTCCTCTGAGATTA+CGG | + | 51761:2549-2568 | None:intergenic | 45.0% |
| !! | CGGGTTAGTAGCTAGACTAA+TGG | - | 51761:1071-1090 | MS.gene050756:CDS | 45.0% |
| !! | GTCGACTAGCTTTCTAGACA+TGG | + | 51761:1568-1587 | None:intergenic | 45.0% |
| !!! | TTTTATTTGATTTATTTTTT+TGG | - | 51761:930-949 | MS.gene050756:CDS | 5.0% |
| ACATGAGCTGCATTCTTCGG+CGG | + | 51761:1408-1427 | None:intergenic | 50.0% | |
| AGCAGACAGCAAAAAGTGGG+GGG | + | 51761:891-910 | None:intergenic | 50.0% | |
| ATCTCAGAGGAGCCTTCTAC+TGG | - | 51761:2551-2570 | MS.gene050756:intron | 50.0% | |
| CATGGATGACTATCGTCGTG+CGG | - | 51761:1197-1216 | MS.gene050756:CDS | 50.0% | |
| CTTGGGATGCCATGGAATCA+AGG | - | 51761:1256-1275 | MS.gene050756:CDS | 50.0% | |
| GAAGTCTTCTTGGGATGCCA+TGG | - | 51761:1248-1267 | MS.gene050756:CDS | 50.0% | |
| GAGAGAGAGAGAGAGAGAGA+TGG | + | 51761:399-418 | None:intergenic | 50.0% | |
| GGAGCTGAATAGTGAAGCAC+CGG | + | 51761:1136-1155 | None:intergenic | 50.0% | |
| GTTTGTAGTGATGAGGGGTG+TGG | - | 51761:1036-1055 | MS.gene050756:CDS | 50.0% | |
| TCGGGCACACTTCTCTTCAA+GGG | + | 51761:2332-2351 | None:intergenic | 50.0% | |
| TCTTTGCCAACTTCGGACGT+CGG | - | 51761:1102-1121 | MS.gene050756:CDS | 50.0% | |
| TGATCAGGACTTCTTGCCTC+AGG | + | 51761:2188-2207 | None:intergenic | 50.0% | |
| TGGATGGGGGAAACTCCTTT+CGG | + | 51761:2118-2137 | None:intergenic | 50.0% | |
| ! | ACGTTTTCTGCGGCAATGCT+CGG | + | 51761:1881-1900 | None:intergenic | 50.0% |
| ! | ATGGGTTTAGCCGACTTTGG+AGG | + | 51761:1333-1352 | None:intergenic | 50.0% |
| ! | CGGTTTGCACACGTTTTCTG+CGG | + | 51761:1891-1910 | None:intergenic | 50.0% |
| ! | GCCCTAGAGCTTGACCTTTT+AGG | + | 51761:2086-2105 | None:intergenic | 50.0% |
| ! | GGAATGGGTTTAGCCGACTT+TGG | + | 51761:1336-1355 | None:intergenic | 50.0% |
| ! | TGCAGCTCATGTAATGGAGG+CGG | - | 51761:1416-1435 | MS.gene050756:CDS | 50.0% |
| ATCCTCTGCCGAGCAAGTGA+TGG | - | 51761:2358-2377 | MS.gene050756:intron | 55.0% | |
| CGCACGACGATAGTCATCCA+TGG | + | 51761:1199-1218 | None:intergenic | 55.0% | |
| CTCGGCAGAGGATAGTGACT+CGG | + | 51761:2351-2370 | None:intergenic | 55.0% | |
| CTCGGGCACACTTCTCTTCA+AGG | + | 51761:2333-2352 | None:intergenic | 55.0% | |
| GAAGCCCTCAGCCATATACG+AGG | - | 51761:1457-1476 | MS.gene050756:CDS | 55.0% | |
| TCGGCAGAGGATAGTGACTC+GGG | + | 51761:2350-2369 | None:intergenic | 55.0% | |
| TTCCATCACTTGCTCGGCAG+AGG | + | 51761:2363-2382 | None:intergenic | 55.0% | |
| !! | GTTTCTGGCTCCTTGTGAGC+TGG | + | 51761:1848-1867 | None:intergenic | 55.0% |
| !! | TGACAGCAGAGGTGTTCCTG+AGG | - | 51761:2169-2188 | MS.gene050756:CDS | 55.0% |
| !! | TGAGGGTGCTCTTCGTTCCA+TGG | - | 51761:1179-1198 | MS.gene050756:CDS | 55.0% |
| AGCTCACCGACGTCCGAAGT+TGG | + | 51761:1111-1130 | None:intergenic | 60.0% | |
| GGGTGTGGGAGTAAAGCTCC+CGG | - | 51761:1051-1070 | MS.gene050756:CDS | 60.0% | |
| GGTGTGGGAGTAAAGCTCCC+GGG | - | 51761:1052-1071 | MS.gene050756:CDS | 60.0% | |
| TCGGACGTCGGTGAGCTCTC+CGG | - | 51761:1114-1133 | MS.gene050756:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 51761 | gene | 284 | 2727 | 284 | ID=MS.gene050756 |
| 51761 | mRNA | 284 | 2727 | 284 | ID=MS.gene050756.t1;Parent=MS.gene050756 |
| 51761 | exon | 2631 | 2727 | 2631 | ID=MS.gene050756.t1.exon1;Parent=MS.gene050756.t1 |
| 51761 | CDS | 2631 | 2727 | 2631 | ID=cds.MS.gene050756.t1;Parent=MS.gene050756.t1 |
| 51761 | exon | 2135 | 2193 | 2135 | ID=MS.gene050756.t1.exon2;Parent=MS.gene050756.t1 |
| 51761 | CDS | 2135 | 2193 | 2135 | ID=cds.MS.gene050756.t1;Parent=MS.gene050756.t1 |
| 51761 | exon | 284 | 2035 | 284 | ID=MS.gene050756.t1.exon3;Parent=MS.gene050756.t1 |
| 51761 | CDS | 284 | 2035 | 284 | ID=cds.MS.gene050756.t1;Parent=MS.gene050756.t1 |
| Gene Sequence |
| Protein sequence |
