Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40803.t1 | XP_003591202.3 | 78.9 | 814 | 144 | 8 | 1 | 808 | 3 | 794 | 0.00E+00 | 1117.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40803.t1 | A0A396JRD2 | 79.4 | 770 | 140 | 6 | 45 | 808 | 1 | 757 | 4.8e-310 | 1073.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene40803 | MS.gene050756 | PPI |
| MS.gene005297 | MS.gene40803 | PPI |
| MS.gene40803 | MS.gene054400 | PPI |
| MS.gene072558 | MS.gene40803 | PPI |
| MS.gene45026 | MS.gene40803 | PPI |
| MS.gene40803 | MS.gene005297 | PPI |
| MS.gene40803 | MS.gene050959 | PPI |
| MS.gene44175 | MS.gene40803 | PPI |
| MS.gene40803 | MS.gene44175 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40803.t1 | MTR_1g083850 | 86.561 | 759 | 87 | 5 | 56 | 808 | 1 | 750 | 0.0 | 1283 |
| MS.gene40803.t1 | MTR_7g112030 | 47.465 | 927 | 351 | 27 | 1 | 808 | 1 | 910 | 0.0 | 660 |
| MS.gene40803.t1 | MTR_2g034810 | 28.846 | 936 | 501 | 34 | 8 | 805 | 12 | 920 | 7.22e-70 | 248 |
| MS.gene40803.t1 | MTR_7g082220 | 39.623 | 106 | 55 | 3 | 703 | 805 | 835 | 934 | 8.55e-13 | 72.8 |
| MS.gene40803.t1 | MTR_6g018770 | 28.492 | 179 | 107 | 8 | 639 | 805 | 708 | 877 | 3.80e-12 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40803.t1 | AT3G58650 | 29.002 | 862 | 499 | 30 | 1 | 805 | 4 | 809 | 3.14e-65 | 233 |
| MS.gene40803.t1 | AT5G26910 | 28.196 | 876 | 504 | 31 | 1 | 805 | 4 | 825 | 1.05e-57 | 212 |
| MS.gene40803.t1 | AT5G26910 | 28.196 | 876 | 504 | 31 | 1 | 805 | 4 | 825 | 1.05e-57 | 212 |
| MS.gene40803.t1 | AT5G26910 | 27.968 | 876 | 505 | 30 | 1 | 805 | 4 | 824 | 1.11e-56 | 209 |
| MS.gene40803.t1 | AT5G26910 | 29.283 | 502 | 287 | 18 | 1 | 444 | 4 | 495 | 2.66e-27 | 118 |
| MS.gene40803.t1 | AT3G05750 | 35.220 | 159 | 91 | 3 | 652 | 805 | 543 | 694 | 2.67e-14 | 77.4 |
| MS.gene40803.t1 | AT3G05750 | 35.220 | 159 | 91 | 3 | 652 | 805 | 543 | 694 | 2.67e-14 | 77.4 |
| MS.gene40803.t1 | AT3G05750 | 35.220 | 159 | 91 | 3 | 652 | 805 | 646 | 797 | 2.85e-14 | 77.4 |
| MS.gene40803.t1 | AT3G05750 | 35.220 | 159 | 91 | 3 | 652 | 805 | 638 | 789 | 2.91e-14 | 77.4 |
Find 155 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACCTGCTTAGTGATAAAT+TGG | 0.140845 | 1.2:-59625500 | MS.gene40803:CDS |
| TCTAAATATGCTGCATTCTT+AGG | 0.165931 | 1.2:+59626558 | None:intergenic |
| GACATTGAAGCCTTTGAAAA+TGG | 0.201384 | 1.2:-59624206 | MS.gene40803:CDS |
| TGACTTAAGAGCCATGTTTA+AGG | 0.207080 | 1.2:+59626743 | None:intergenic |
| TCTTGATCTGCAAGAGAAAT+TGG | 0.213960 | 1.2:-59626445 | MS.gene40803:CDS |
| ACAAGTTTGTGTTGACTTAT+TGG | 0.216757 | 1.2:+59626131 | None:intergenic |
| TGAAGTTGATTTACCTTTGC+TGG | 0.221523 | 1.2:+59626164 | None:intergenic |
| TGAACCAAAGGCTCATAAAA+TGG | 0.230963 | 1.2:-59626697 | MS.gene40803:CDS |
| ATCACTACTAATTGATATTA+AGG | 0.272784 | 1.2:+59626869 | None:intergenic |
| GCCTAAGAACGGTGCTGTTC+TGG | 0.287283 | 1.2:+59626190 | None:intergenic |
| TTCTGAAGAACTCTTTCTTT+TGG | 0.289753 | 1.2:+59625990 | None:intergenic |
| TGTTGAATTTGAATGGAAAT+AGG | 0.295796 | 1.2:-59626263 | MS.gene40803:CDS |
| TTGTGATAAAAGTGTTTCTT+TGG | 0.305866 | 1.2:+59627396 | None:intergenic |
| TACCTATTTGATAGATGAAT+TGG | 0.313922 | 1.2:-59624159 | MS.gene40803:CDS |
| AACCAATTCATCTTATATTC+AGG | 0.323610 | 1.2:+59624644 | None:intergenic |
| AAAAGAATCAACATCAATTC+TGG | 0.330223 | 1.2:+59625744 | None:intergenic |
| CGAGAGATTCAGAAAATAAT+AGG | 0.330370 | 1.2:-59626356 | MS.gene40803:CDS |
| AAATAATTACCAGGTAAGTT+AGG | 0.347260 | 1.2:+59627372 | None:intergenic |
| TGAATCTCTCGAACCTTTGA+AGG | 0.348909 | 1.2:+59626368 | None:intergenic |
| ATTCTAACATTGAATCTAAA+AGG | 0.356408 | 1.2:-59626056 | MS.gene40803:CDS |
| ATGAGTCCGGCTACTAGCCC+TGG | 0.360296 | 1.2:+59626822 | None:intergenic |
| CACCTGAATATAAGATGAAT+TGG | 0.375181 | 1.2:-59624646 | MS.gene40803:CDS |
| TAAGAATGCAGCATATTTAG+AGG | 0.380059 | 1.2:-59626556 | MS.gene40803:CDS |
| TTTATGAGCCTTTGGTTCAA+TGG | 0.380731 | 1.2:+59626701 | None:intergenic |
| GCCAACTCTCTTTGATCTGT+TGG | 0.381202 | 1.2:-59624516 | MS.gene40803:CDS |
| CTTATCAGTTACTCTTGTGC+TGG | 0.385816 | 1.2:+59626032 | None:intergenic |
| ACTCAGCAATGTAGAATTGA+TGG | 0.386018 | 1.2:-59624564 | MS.gene40803:CDS |
| AGGGATATGTTGAATTTGAA+TGG | 0.390361 | 1.2:-59626270 | MS.gene40803:CDS |
| ATGCAAGATGAAGAAGTATA+TGG | 0.393979 | 1.2:-59624692 | MS.gene40803:CDS |
| AACCAATTCATCTATCAAAT+AGG | 0.394619 | 1.2:+59624157 | None:intergenic |
| TGGCATGAATCAGCAACTTC+AGG | 0.397356 | 1.2:-59625431 | MS.gene40803:intron |
| TGAGCACTCCATTGGGTAGA+TGG | 0.402874 | 1.2:-59624238 | MS.gene40803:CDS |
| TCTTTGATCTGTTGGAGAAT+CGG | 0.419385 | 1.2:-59624508 | MS.gene40803:CDS |
| AGTAGCCGGACTCATGGGTT+TGG | 0.420069 | 1.2:-59626814 | MS.gene40803:CDS |
| TGTGCTCCTCATATATAGTT+GGG | 0.423119 | 1.2:+59626506 | None:intergenic |
| ATGAATTGGTTTCTGATTTG+TGG | 0.425319 | 1.2:-59624145 | MS.gene40803:CDS |
| TCAAATTATGATACAATGCT+TGG | 0.428269 | 1.2:-59625451 | MS.gene40803:CDS |
| TCCTACGAGGTTACATGTAA+TGG | 0.436748 | 1.2:-59625680 | MS.gene40803:CDS |
| ATATAACTTGCTCCTCATCT+TGG | 0.439222 | 1.2:+59626404 | None:intergenic |
| TACAAAATCATCAAGGATGA+TGG | 0.444399 | 1.2:-59624609 | MS.gene40803:CDS |
| AAAGGTTGGTTAGCAGAAGA+AGG | 0.447131 | 1.2:-59624332 | MS.gene40803:CDS |
| TTGTTATGAGTAACTGAAAT+GGG | 0.447444 | 1.2:+59626618 | None:intergenic |
| GAACCAAAGGCTCATAAAAT+GGG | 0.450651 | 1.2:-59626696 | MS.gene40803:CDS |
| TGAAGCCTTTGAAAATGGCT+TGG | 0.457955 | 1.2:-59624201 | MS.gene40803:CDS |
| TGAGTCCGGCTACTAGCCCT+GGG | 0.458272 | 1.2:+59626823 | None:intergenic |
| GCCAGAACAGCACCGTTCTT+AGG | 0.459790 | 1.2:-59626191 | MS.gene40803:CDS |
| TTACAGCTTGGATCTTCCAT+TGG | 0.460975 | 1.2:+59625220 | None:intergenic |
| ACTGATGCCACCATGCATCT+AGG | 0.461328 | 1.2:+59624362 | None:intergenic |
| TTTCATCAGCAAAAGTAACT+TGG | 0.462522 | 1.2:-59625128 | MS.gene40803:CDS |
| ACAATTGTTTCAGATAAAGA+TGG | 0.464516 | 1.2:-59626943 | MS.gene40803:intron |
| AGGGCTAGTAGCCGGACTCA+TGG | 0.465030 | 1.2:-59626820 | MS.gene40803:CDS |
| AAGAATACTCTAAGCTCAAA+AGG | 0.473263 | 1.2:-59624463 | MS.gene40803:CDS |
| GAAGGGTGTGATAAGGCCCC+AGG | 0.473540 | 1.2:-59626840 | MS.gene40803:CDS |
| AAAATGAAACTTTGTCTCCA+AGG | 0.473878 | 1.2:-59626650 | MS.gene40803:CDS |
| GTTTGTTATCGTCCTAGCGC+TGG | 0.478195 | 1.2:+59626092 | None:intergenic |
| CAAGGACATGAGCACTCCAT+TGG | 0.478271 | 1.2:-59624246 | MS.gene40803:CDS |
| GCTTCCTTAGCTTCTTTGAT+CGG | 0.480496 | 1.2:-59627431 | MS.gene40803:CDS |
| TTTCAATGTTTCCCTTTGCA+TGG | 0.487929 | 1.2:+59627250 | None:intergenic |
| TTTGTTATGAGTAACTGAAA+TGG | 0.489794 | 1.2:+59626617 | None:intergenic |
| GAAATAGAACGGTGTTCTGT+TGG | 0.491216 | 1.2:-59625601 | MS.gene40803:CDS |
| TTGTGCTCCTCATATATAGT+TGG | 0.491806 | 1.2:+59626505 | None:intergenic |
| TATCACAATCCTAACTTACC+TGG | 0.492317 | 1.2:-59627381 | MS.gene40803:intron |
| ATATACTTCTTCATCTTGCA+TGG | 0.495644 | 1.2:+59624694 | None:intergenic |
| ATTTCTGAGGCACATTGAGG+TGG | 0.497061 | 1.2:+59625619 | None:intergenic |
| TGAATCCAAACCCATGAGTC+CGG | 0.499050 | 1.2:+59626809 | None:intergenic |
| AAGAGTAACTGATAAGCAAA+AGG | 0.502215 | 1.2:-59626025 | MS.gene40803:CDS |
| GGGCTAGTAGCCGGACTCAT+GGG | 0.507737 | 1.2:-59626819 | MS.gene40803:CDS |
| CTGTTGGAGAATCGGAGAAC+TGG | 0.510605 | 1.2:-59624500 | MS.gene40803:CDS |
| TGCCCAATTTATCACTAAGC+AGG | 0.510690 | 1.2:+59625497 | None:intergenic |
| AAGTCTACTTCAACCTTCAA+AGG | 0.512513 | 1.2:-59626381 | MS.gene40803:CDS |
| AATAGGTCTTGCCTAGGTAA+AGG | 0.513285 | 1.2:-59626339 | MS.gene40803:CDS |
| CTTTGAACCTCGGCATTGGA+TGG | 0.515084 | 1.2:+59626294 | None:intergenic |
| CCTACTTTGAACCTCGGCAT+TGG | 0.515663 | 1.2:+59626290 | None:intergenic |
| TGAAATCATGCCAATGTCAC+AGG | 0.515734 | 1.2:-59627232 | MS.gene40803:CDS |
| GCATGGTATGCAACACATCA+AGG | 0.515846 | 1.2:-59625546 | MS.gene40803:CDS |
| CAGAAAGTTCGACCAGCGCT+AGG | 0.516699 | 1.2:-59626104 | MS.gene40803:CDS |
| CATTCCGATCAAAGAAGCTA+AGG | 0.517044 | 1.2:+59627427 | None:intergenic |
| GATGTTTCAAACCATGCAAA+GGG | 0.520211 | 1.2:-59627261 | MS.gene40803:CDS |
| CTGGTGTTTACCTGTGACAT+TGG | 0.521249 | 1.2:+59627222 | None:intergenic |
| GTTAGCAGAAGAAGGGTACA+AGG | 0.523262 | 1.2:-59624324 | MS.gene40803:CDS |
| TTGCAGATCAAGAGTTCTCA+AGG | 0.524434 | 1.2:+59626455 | None:intergenic |
| AAGCATGGAAGAAGAGGTGA+TGG | 0.525379 | 1.2:-59624285 | MS.gene40803:CDS |
| AATGGAGAAAAGAAGTTACA+AGG | 0.533794 | 1.2:-59627457 | MS.gene40803:CDS |
| CAAGTCCCCAACTATATATG+AGG | 0.533920 | 1.2:-59626512 | MS.gene40803:CDS |
| GAAATGGGTTTAGCAGACCT+TGG | 0.538176 | 1.2:+59626633 | None:intergenic |
| GATGGAACTTGAATATGTAA+AGG | 0.538230 | 1.2:-59624591 | MS.gene40803:CDS |
| GATGTCGGAGTTTAGAAGCA+TGG | 0.546019 | 1.2:-59624300 | MS.gene40803:CDS |
| AAGGACATGAGCACTCCATT+GGG | 0.547496 | 1.2:-59624245 | MS.gene40803:CDS |
| AGAGTTCTTCAGAAAAGAAG+AGG | 0.548294 | 1.2:-59625981 | MS.gene40803:CDS |
| CATCAGTGATGAGGAAAGGT+TGG | 0.550514 | 1.2:-59624346 | MS.gene40803:CDS |
| GCAGGCAAGTTCTTGTTGAA+AGG | 0.551031 | 1.2:-59624397 | MS.gene40803:CDS |
| GAAAATAATAGGTCTTGCCT+AGG | 0.551230 | 1.2:-59626345 | MS.gene40803:CDS |
| TCTATTTCTGAGGCACATTG+AGG | 0.551487 | 1.2:+59625616 | None:intergenic |
| TTGTGATACCATTGAACCAA+AGG | 0.551569 | 1.2:-59626709 | MS.gene40803:CDS |
| CAATGCCGAGGTTCAAAGTA+GGG | 0.554685 | 1.2:-59626289 | MS.gene40803:CDS |
| CCAATGCCGAGGTTCAAAGT+AGG | 0.555210 | 1.2:-59626290 | MS.gene40803:CDS |
| TATAAAATGTAATGTTACAA+TGG | 0.555302 | 1.2:-59625899 | MS.gene40803:CDS |
| CATACAGCATGACAGAAAGC+AGG | 0.556494 | 1.2:-59625855 | MS.gene40803:CDS |
| AGGAGCACAATGTCTTCAGT+TGG | 0.557248 | 1.2:-59626492 | MS.gene40803:CDS |
| CATGGAAGAAGAGGTGATGG+TGG | 0.557606 | 1.2:-59624282 | MS.gene40803:CDS |
| ATGGAGAAAAGAAGTTACAA+GGG | 0.561403 | 1.2:-59627456 | MS.gene40803:CDS |
| GTTTAGAAGCATGGAAGAAG+AGG | 0.561464 | 1.2:-59624291 | MS.gene40803:CDS |
| TTACATTTACATCTCCATTG+AGG | 0.562743 | 1.2:-59625819 | MS.gene40803:CDS |
| TTTGCTGGTTTGCCTAAGAA+CGG | 0.562748 | 1.2:+59626179 | None:intergenic |
| CTAAGCAAGTGATGGAAACA+AGG | 0.566796 | 1.2:-59625768 | MS.gene40803:CDS |
| TCCAACAGATCAAAGAGAGT+TGG | 0.567522 | 1.2:+59624515 | None:intergenic |
| TGATGATGAAGGGTGTGATA+AGG | 0.567960 | 1.2:-59626847 | MS.gene40803:CDS |
| ATTAGTAGTGATGATGATGA+AGG | 0.568918 | 1.2:-59626858 | MS.gene40803:CDS |
| AAGGCCCCAGGGCTAGTAGC+CGG | 0.575410 | 1.2:-59626828 | MS.gene40803:CDS |
| AGAAGGGTACAAGGAGATGT+CGG | 0.578044 | 1.2:-59624315 | MS.gene40803:CDS |
| TCTTAGGCTTCATACTAACA+TGG | 0.580559 | 1.2:+59626574 | None:intergenic |
| TAGTGATAAATTGGGCAGCA+TGG | 0.582742 | 1.2:-59625491 | MS.gene40803:CDS |
| AGAACACCGTTCTATTTCTG+AGG | 0.582791 | 1.2:+59625606 | None:intergenic |
| GTCGACTACTAAGCAAGTGA+TGG | 0.583625 | 1.2:-59625776 | MS.gene40803:CDS |
| AACCTGCTTAGTGATAAATT+GGG | 0.585492 | 1.2:-59625499 | MS.gene40803:CDS |
| TCACTTAGATTCCTTAAACA+TGG | 0.585838 | 1.2:-59626754 | MS.gene40803:CDS |
| TCTGTAGATATCAGAACCAA+TGG | 0.586401 | 1.2:-59625236 | MS.gene40803:intron |
| TCACTACTTGCAATATCACT+AGG | 0.586974 | 1.2:+59626903 | None:intergenic |
| TTGTTGAAAGGTGCAAAGCA+TGG | 0.588420 | 1.2:-59624385 | MS.gene40803:CDS |
| AATGCATGGAATTAAGATGC+AGG | 0.588770 | 1.2:-59624415 | MS.gene40803:CDS |
| AGATGTTTCAAACCATGCAA+AGG | 0.589368 | 1.2:-59627262 | MS.gene40803:CDS |
| TTTCTGAGGCACATTGAGGT+GGG | 0.592064 | 1.2:+59625620 | None:intergenic |
| AAAGCTCTACAAAATCATCA+AGG | 0.594973 | 1.2:-59624616 | MS.gene40803:CDS |
| TAAGTGACAACATAATGAAG+TGG | 0.601855 | 1.2:+59626770 | None:intergenic |
| CATATCCCTACTTTGAACCT+CGG | 0.606736 | 1.2:+59626284 | None:intergenic |
| AAGTCAAGCCATCTACCCAA+TGG | 0.609117 | 1.2:+59624230 | None:intergenic |
| AAGGTTGGTTAGCAGAAGAA+GGG | 0.610456 | 1.2:-59624331 | MS.gene40803:CDS |
| GTGCTCCTCATATATAGTTG+GGG | 0.610822 | 1.2:+59626507 | None:intergenic |
| CGCAACACGGAACCAAGATG+AGG | 0.611483 | 1.2:-59626416 | MS.gene40803:CDS |
| GGAAGACAGATTTAACAGCA+TGG | 0.621284 | 1.2:-59625563 | MS.gene40803:CDS |
| GACAGTGAAGATAGCACATG+TGG | 0.622348 | 1.2:-59625106 | MS.gene40803:intron |
| GTGACAACATAATGAAGTGG+AGG | 0.623561 | 1.2:+59626773 | None:intergenic |
| GTTCTTAGGCAAACCAGCAA+AGG | 0.627546 | 1.2:-59626177 | MS.gene40803:CDS |
| CATGGTATGCAACACATCAA+GGG | 0.628447 | 1.2:-59625545 | MS.gene40803:CDS |
| CAAAGCATGGCCTAGATGCA+TGG | 0.630631 | 1.2:-59624372 | MS.gene40803:CDS |
| TGACTGTGTAAGTGAATGCA+TGG | 0.630868 | 1.2:-59624429 | MS.gene40803:CDS |
| GGTGGATGAGCTTGTTAGCA+AGG | 0.631696 | 1.2:-59624264 | MS.gene40803:CDS |
| CAGATAAAGATGGATGACAA+TGG | 0.635008 | 1.2:-59626933 | MS.gene40803:CDS |
| TGCAGATCAAGAGTTCTCAA+GGG | 0.654144 | 1.2:+59626456 | None:intergenic |
| AATGTGCCTCAGAAATAGAA+CGG | 0.658499 | 1.2:-59625612 | MS.gene40803:CDS |
| AAGGGTGTGATAAGGCCCCA+GGG | 0.660078 | 1.2:-59626839 | MS.gene40803:CDS |
| ATACAGCATGACAGAAAGCA+GGG | 0.663032 | 1.2:-59625854 | MS.gene40803:CDS |
| TCCATTACATGTAACCTCGT+AGG | 0.664556 | 1.2:+59625679 | None:intergenic |
| CGTGATCAGAATGACGCACG+AGG | 0.670720 | 1.2:-59625958 | MS.gene40803:CDS |
| GGCATCTGCTAAGAGCATTG+AGG | 0.678302 | 1.2:-59626535 | MS.gene40803:CDS |
| GCATGGTGGCATCAGTGATG+AGG | 0.679121 | 1.2:-59624355 | MS.gene40803:CDS |
| TTAGTAGTGATGATGATGAA+GGG | 0.685067 | 1.2:-59626857 | MS.gene40803:CDS |
| GTGGCATCAGTGATGAGGAA+AGG | 0.685249 | 1.2:-59624350 | MS.gene40803:CDS |
| GGAGAATCGGAGAACTGGTG+TGG | 0.691183 | 1.2:-59624495 | MS.gene40803:CDS |
| TGTAACACCATCCAATGCCG+AGG | 0.692381 | 1.2:-59626301 | MS.gene40803:CDS |
| AAATTGGAAACAGCGCAACA+CGG | 0.695462 | 1.2:-59626429 | MS.gene40803:CDS |
| AGCATGGCCTAGATGCATGG+TGG | 0.715972 | 1.2:-59624369 | MS.gene40803:CDS |
| AATTATCATTATCTCCTACG+AGG | 0.717855 | 1.2:-59625693 | MS.gene40803:CDS |
| GAGTCCGGCTACTAGCCCTG+GGG | 0.729990 | 1.2:+59626824 | None:intergenic |
| AGGACGATAACAAACAAATG+CGG | 0.767520 | 1.2:-59626084 | MS.gene40803:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGTAATAATAATAAGAA+AGG | + | chr1.2:59624635-59624654 | None:intergenic | 10.0% |
| !! | ATTGTAATAATAATAAGAAA+GGG | + | chr1.2:59624634-59624653 | None:intergenic | 10.0% |
| !! | TATAAAATGTAATGTTACAA+TGG | - | chr1.2:59625693-59625712 | MS.gene40803:CDS | 15.0% |
| !!! | TTAATCATTTTCATTTGTTA+TGG | - | chr1.2:59626211-59626230 | MS.gene40803:CDS | 15.0% |
| !! | AAGAAAAAAATGGTTAAACT+AGG | + | chr1.2:59624423-59624442 | None:intergenic | 20.0% |
| !! | ATCACTACTAATTGATATTA+AGG | + | chr1.2:59624726-59624745 | None:intergenic | 20.0% |
| !! | ATTCTAACATTGAATCTAAA+AGG | - | chr1.2:59625536-59625555 | MS.gene40803:CDS | 20.0% |
| !! | TAAACATAGTATATTATCCT+TGG | - | chr1.2:59626257-59626276 | MS.gene40803:CDS | 20.0% |
| !!! | GAACAAGCATTAATATTTTA+TGG | + | chr1.2:59626837-59626856 | None:intergenic | 20.0% |
| !!! | TCATATATAACCCTTTTTTT+AGG | - | chr1.2:59626855-59626874 | MS.gene40803:CDS | 20.0% |
| ! | AAAAGAATCAACATCAATTC+TGG | + | chr1.2:59625851-59625870 | None:intergenic | 25.0% |
| ! | AAAGACTAGAAATAATTACC+AGG | + | chr1.2:59624232-59624251 | None:intergenic | 25.0% |
| ! | AAATAATTACCAGGTAAGTT+AGG | + | chr1.2:59624223-59624242 | None:intergenic | 25.0% |
| ! | AACCAATTCATCTATCAAAT+AGG | + | chr1.2:59627438-59627457 | None:intergenic | 25.0% |
| ! | AACCAATTCATCTTATATTC+AGG | + | chr1.2:59626951-59626970 | None:intergenic | 25.0% |
| ! | ACAATTGTTTCAGATAAAGA+TGG | - | chr1.2:59624649-59624668 | MS.gene40803:CDS | 25.0% |
| ! | ACTTCAAAGTTAAGCAAAAT+TGG | + | chr1.2:59626664-59626683 | None:intergenic | 25.0% |
| ! | GAGCAAAAAATATTCAGAAT+AGG | + | chr1.2:59624300-59624319 | None:intergenic | 25.0% |
| ! | GTCTTAACAAAATGTCATTA+GGG | + | chr1.2:59624488-59624507 | None:intergenic | 25.0% |
| ! | TACCTATTTGATAGATGAAT+TGG | - | chr1.2:59627433-59627452 | MS.gene40803:CDS | 25.0% |
| ! | TCAAACCAGAAAAATTGTAA+TGG | - | chr1.2:59625379-59625398 | MS.gene40803:intron | 25.0% |
| ! | TCAAATTATGATACAATGCT+TGG | - | chr1.2:59626141-59626160 | MS.gene40803:CDS | 25.0% |
| ! | TGTAACAACAAAAATGAAAG+CGG | - | chr1.2:59626390-59626409 | MS.gene40803:CDS | 25.0% |
| ! | TGTCTTAACAAAATGTCATT+AGG | + | chr1.2:59624489-59624508 | None:intergenic | 25.0% |
| ! | TGTTGAATTTGAATGGAAAT+AGG | - | chr1.2:59625329-59625348 | MS.gene40803:intron | 25.0% |
| ! | TTAAACTAGGAAACTAAGAA+AGG | + | chr1.2:59624410-59624429 | None:intergenic | 25.0% |
| ! | TTGTTATGAGTAACTGAAAT+GGG | + | chr1.2:59624977-59624996 | None:intergenic | 25.0% |
| !! | CTACATAAAACTTCCTTTTT+AGG | - | chr1.2:59624570-59624589 | MS.gene40803:CDS | 25.0% |
| !! | GGAGATAATGATAATTTTTC+AGG | + | chr1.2:59625895-59625914 | None:intergenic | 25.0% |
| !! | TTTGTTATGAGTAACTGAAA+TGG | + | chr1.2:59624978-59624997 | None:intergenic | 25.0% |
| !!! | TATATAACCCTTTTTTTAGG+AGG | - | chr1.2:59626858-59626877 | MS.gene40803:CDS | 25.0% |
| !!! | TGTTGGTTTTGAATCTATTT+TGG | - | chr1.2:59626008-59626027 | MS.gene40803:CDS | 25.0% |
| !!! | TTGTGATAAAAGTGTTTCTT+TGG | + | chr1.2:59624199-59624218 | None:intergenic | 25.0% |
| AAAATGAAACTTTGTCTCCA+AGG | - | chr1.2:59624942-59624961 | MS.gene40803:intron | 30.0% | |
| AAAGCTCTACAAAATCATCA+AGG | - | chr1.2:59626976-59626995 | MS.gene40803:intron | 30.0% | |
| AAAGGTTGAAAAAATCACAC+TGG | + | chr1.2:59624392-59624411 | None:intergenic | 30.0% | |
| AACCTGCTTAGTGATAAATT+GGG | - | chr1.2:59626093-59626112 | MS.gene40803:CDS | 30.0% | |
| AAGAATACTCTAAGCTCAAA+AGG | - | chr1.2:59627129-59627148 | MS.gene40803:intron | 30.0% | |
| AAGAGTAACTGATAAGCAAA+AGG | - | chr1.2:59625567-59625586 | MS.gene40803:CDS | 30.0% | |
| AATTATCATTATCTCCTACG+AGG | - | chr1.2:59625899-59625918 | MS.gene40803:CDS | 30.0% | |
| AGGGATATGTTGAATTTGAA+TGG | - | chr1.2:59625322-59625341 | MS.gene40803:intron | 30.0% | |
| ATATACTTCTTCATCTTGCA+TGG | + | chr1.2:59626901-59626920 | None:intergenic | 30.0% | |
| ATATCTACAGAAGAGAAGAA+TGG | + | chr1.2:59626347-59626366 | None:intergenic | 30.0% | |
| ATGGAGAAAAGAAGTTACAA+GGG | - | chr1.2:59624136-59624155 | MS.gene40803:CDS | 30.0% | |
| CACCTGAATATAAGATGAAT+TGG | - | chr1.2:59626946-59626965 | MS.gene40803:intron | 30.0% | |
| CGAGAGATTCAGAAAATAAT+AGG | - | chr1.2:59625236-59625255 | MS.gene40803:intron | 30.0% | |
| GATGGAACTTGAATATGTAA+AGG | - | chr1.2:59627001-59627020 | MS.gene40803:intron | 30.0% | |
| GCAAAATTATTCTTATCAGC+TGG | - | chr1.2:59626638-59626657 | MS.gene40803:CDS | 30.0% | |
| TAAGAATGCAGCATATTTAG+AGG | - | chr1.2:59625036-59625055 | MS.gene40803:intron | 30.0% | |
| TAAGTGACAACATAATGAAG+TGG | + | chr1.2:59624825-59624844 | None:intergenic | 30.0% | |
| TACAAAATCATCAAGGATGA+TGG | - | chr1.2:59626983-59627002 | MS.gene40803:intron | 30.0% | |
| TCACTTAGATTCCTTAAACA+TGG | - | chr1.2:59624838-59624857 | MS.gene40803:intron | 30.0% | |
| TCTAAATATGCTGCATTCTT+AGG | + | chr1.2:59625037-59625056 | None:intergenic | 30.0% | |
| TTACATTTACATCTCCATTG+AGG | - | chr1.2:59625773-59625792 | MS.gene40803:CDS | 30.0% | |
| TTTCATCAGCAAAAGTAACT+TGG | - | chr1.2:59626464-59626483 | MS.gene40803:CDS | 30.0% | |
| ! | ACTTGTTAAGAAGCCTAAAA+AGG | + | chr1.2:59624586-59624605 | None:intergenic | 30.0% |
| ! | ATACTAACATGGCTTTTGAT+AGG | + | chr1.2:59625010-59625029 | None:intergenic | 30.0% |
| ! | ATGAATTGGTTTCTGATTTG+TGG | - | chr1.2:59627447-59627466 | MS.gene40803:CDS | 30.0% |
| ! | ATGCAAGATGAAGAAGTATA+TGG | - | chr1.2:59626900-59626919 | MS.gene40803:CDS | 30.0% |
| ! | ATTAGTAGTGATGATGATGA+AGG | - | chr1.2:59624734-59624753 | MS.gene40803:intron | 30.0% |
| ! | TGAGATATGTTTTTCCTCAA+TGG | + | chr1.2:59625790-59625809 | None:intergenic | 30.0% |
| ! | TTAGTAGTGATGATGATGAA+GGG | - | chr1.2:59624735-59624754 | MS.gene40803:intron | 30.0% |
| ! | TTCTTTTCATCACGTTGATA+AGG | - | chr1.2:59625864-59625883 | MS.gene40803:CDS | 30.0% |
| !! | AAATTCCAAGCCATTTTCAA+AGG | + | chr1.2:59627399-59627418 | None:intergenic | 30.0% |
| !! | ACAAGTTTGTGTTGACTTAT+TGG | + | chr1.2:59625464-59625483 | None:intergenic | 30.0% |
| !! | TTCTGAAGAACTCTTTCTTT+TGG | + | chr1.2:59625605-59625624 | None:intergenic | 30.0% |
| !!! | AAGTTACTTTTGCTGATGAA+AGG | + | chr1.2:59626465-59626484 | None:intergenic | 30.0% |
| !!! | TCATTTTTGTTGTTACAGCT+TGG | + | chr1.2:59626387-59626406 | None:intergenic | 30.0% |
| AAGTCTACTTCAACCTTCAA+AGG | - | chr1.2:59625211-59625230 | MS.gene40803:CDS | 35.0% | |
| AATGCATGGAATTAAGATGC+AGG | - | chr1.2:59627177-59627196 | MS.gene40803:intron | 35.0% | |
| AATGTGCCTCAGAAATAGAA+CGG | - | chr1.2:59625980-59625999 | MS.gene40803:CDS | 35.0% | |
| ACTCAGCAATGTAGAATTGA+TGG | - | chr1.2:59627028-59627047 | MS.gene40803:intron | 35.0% | |
| AGAGTTCTTCAGAAAAGAAG+AGG | - | chr1.2:59625611-59625630 | MS.gene40803:CDS | 35.0% | |
| AGATGTTTCAAACCATGCAA+AGG | - | chr1.2:59624330-59624349 | MS.gene40803:CDS | 35.0% | |
| AGGACGATAACAAACAAATG+CGG | - | chr1.2:59625508-59625527 | MS.gene40803:CDS | 35.0% | |
| ATCAGTTAGTCAAAGAGATG+AGG | - | chr1.2:59626292-59626311 | MS.gene40803:CDS | 35.0% | |
| CAGATAAAGATGGATGACAA+TGG | - | chr1.2:59624659-59624678 | MS.gene40803:CDS | 35.0% | |
| GAAAATAATAGGTCTTGCCT+AGG | - | chr1.2:59625247-59625266 | MS.gene40803:intron | 35.0% | |
| GAACCAAAGGCTCATAAAAT+GGG | - | chr1.2:59624896-59624915 | MS.gene40803:intron | 35.0% | |
| GAACCTGCTTAGTGATAAAT+TGG | - | chr1.2:59626092-59626111 | MS.gene40803:CDS | 35.0% | |
| GATGTTTCAAACCATGCAAA+GGG | - | chr1.2:59624331-59624350 | MS.gene40803:CDS | 35.0% | |
| TATCACAATCCTAACTTACC+TGG | - | chr1.2:59624211-59624230 | MS.gene40803:CDS | 35.0% | |
| TATTATCCTTGGCAACTTTC+TGG | - | chr1.2:59626268-59626287 | MS.gene40803:CDS | 35.0% | |
| TCACTACTTGCAATATCACT+AGG | + | chr1.2:59624692-59624711 | None:intergenic | 35.0% | |
| TCGTGCTAACAAATTCTGTA+AGG | + | chr1.2:59624611-59624630 | None:intergenic | 35.0% | |
| TCTCAAGGTTATTCAAAGCA+TGG | + | chr1.2:59626612-59626631 | None:intergenic | 35.0% | |
| TCTGTAGATATCAGAACCAA+TGG | - | chr1.2:59626356-59626375 | MS.gene40803:CDS | 35.0% | |
| TCTTAGGCTTCATACTAACA+TGG | + | chr1.2:59625021-59625040 | None:intergenic | 35.0% | |
| TCTTGATCTGCAAGAGAAAT+TGG | - | chr1.2:59625147-59625166 | MS.gene40803:CDS | 35.0% | |
| TCTTTGATCTGTTGGAGAAT+CGG | - | chr1.2:59627084-59627103 | MS.gene40803:intron | 35.0% | |
| TGAACCAAAGGCTCATAAAA+TGG | - | chr1.2:59624895-59624914 | MS.gene40803:intron | 35.0% | |
| TGACTTAAGAGCCATGTTTA+AGG | + | chr1.2:59624852-59624871 | None:intergenic | 35.0% | |
| TGTGCTCCTCATATATAGTT+GGG | + | chr1.2:59625089-59625108 | None:intergenic | 35.0% | |
| TTGTGATACCATTGAACCAA+AGG | - | chr1.2:59624883-59624902 | MS.gene40803:intron | 35.0% | |
| TTGTGCTCCTCATATATAGT+TGG | + | chr1.2:59625090-59625109 | None:intergenic | 35.0% | |
| TTTCAATGTTTCCCTTTGCA+TGG | + | chr1.2:59624345-59624364 | None:intergenic | 35.0% | |
| ! | AAGCAGATTTTCCTTTACCT+AGG | + | chr1.2:59625267-59625286 | None:intergenic | 35.0% |
| ! | CAGAAGTGTAAAGACAATCA+AGG | + | chr1.2:59626524-59626543 | None:intergenic | 35.0% |
| ! | GACATTGAAGCCTTTGAAAA+TGG | - | chr1.2:59627386-59627405 | MS.gene40803:CDS | 35.0% |
| ! | TAATTTTGCAGCATGTCTCA+AGG | + | chr1.2:59626627-59626646 | None:intergenic | 35.0% |
| ! | TCTGGCCATTACAATTTTTC+TGG | + | chr1.2:59625387-59625406 | None:intergenic | 35.0% |
| ! | TGAAGTTGATTTACCTTTGC+TGG | + | chr1.2:59625431-59625450 | None:intergenic | 35.0% |
| ! | TTTATGAGCCTTTGGTTCAA+TGG | + | chr1.2:59624894-59624913 | None:intergenic | 35.0% |
| ! | TTTCCCATTTTATGAGCCTT+TGG | + | chr1.2:59624902-59624921 | None:intergenic | 35.0% |
| !! | ATATAACTTGCTCCTCATCT+TGG | + | chr1.2:59625191-59625210 | None:intergenic | 35.0% |
| AAATTGGAAACAGCGCAACA+CGG | - | chr1.2:59625163-59625182 | MS.gene40803:CDS | 40.0% | |
| AATAGGTCTTGCCTAGGTAA+AGG | - | chr1.2:59625253-59625272 | MS.gene40803:intron | 40.0% | |
| AGCGTCGTTATAAAACATGC+AGG | + | chr1.2:59626730-59626749 | None:intergenic | 40.0% | |
| AGTTAGTCAAAGAGATGAGG+AGG | - | chr1.2:59626295-59626314 | MS.gene40803:CDS | 40.0% | |
| ATACAGCATGACAGAAAGCA+GGG | - | chr1.2:59625738-59625757 | MS.gene40803:CDS | 40.0% | |
| CAAGTCCCCAACTATATATG+AGG | - | chr1.2:59625080-59625099 | MS.gene40803:intron | 40.0% | |
| CATATCCCTACTTTGAACCT+CGG | + | chr1.2:59625311-59625330 | None:intergenic | 40.0% | |
| CATGGTATGCAACACATCAA+GGG | - | chr1.2:59626047-59626066 | MS.gene40803:CDS | 40.0% | |
| CATTCCGATCAAAGAAGCTA+AGG | + | chr1.2:59624168-59624187 | None:intergenic | 40.0% | |
| CGTCGTTATAAAACATGCAG+GGG | + | chr1.2:59626728-59626747 | None:intergenic | 40.0% | |
| CTTATCAGTTACTCTTGTGC+TGG | + | chr1.2:59625563-59625582 | None:intergenic | 40.0% | |
| GAAATAGAACGGTGTTCTGT+TGG | - | chr1.2:59625991-59626010 | MS.gene40803:CDS | 40.0% | |
| GCGTCGTTATAAAACATGCA+GGG | + | chr1.2:59626729-59626748 | None:intergenic | 40.0% | |
| GCTTCCTTAGCTTCTTTGAT+CGG | - | chr1.2:59624161-59624180 | MS.gene40803:CDS | 40.0% | |
| GGAAGACAGATTTAACAGCA+TGG | - | chr1.2:59626029-59626048 | MS.gene40803:CDS | 40.0% | |
| GGATGTATGTATTTGTGCAG+AGG | + | chr1.2:59626816-59626835 | None:intergenic | 40.0% | |
| GTGACAACATAATGAAGTGG+AGG | + | chr1.2:59624822-59624841 | None:intergenic | 40.0% | |
| GTGCTCCTCATATATAGTTG+GGG | + | chr1.2:59625088-59625107 | None:intergenic | 40.0% | |
| TAGTGATAAATTGGGCAGCA+TGG | - | chr1.2:59626101-59626120 | MS.gene40803:CDS | 40.0% | |
| TCCAACAGATCAAAGAGAGT+TGG | + | chr1.2:59627080-59627099 | None:intergenic | 40.0% | |
| TCCATTACATGTAACCTCGT+AGG | + | chr1.2:59625916-59625935 | None:intergenic | 40.0% | |
| TCCTACGAGGTTACATGTAA+TGG | - | chr1.2:59625912-59625931 | MS.gene40803:CDS | 40.0% | |
| TCTGCTGCCTCCTAAAAAAA+GGG | + | chr1.2:59626868-59626887 | None:intergenic | 40.0% | |
| TGAAATCATGCCAATGTCAC+AGG | - | chr1.2:59624360-59624379 | MS.gene40803:CDS | 40.0% | |
| TGAATCTCTCGAACCTTTGA+AGG | + | chr1.2:59625227-59625246 | None:intergenic | 40.0% | |
| TGACTGTGTAAGTGAATGCA+TGG | - | chr1.2:59627163-59627182 | MS.gene40803:intron | 40.0% | |
| TGCAGATCAAGAGTTCTCAA+GGG | + | chr1.2:59625139-59625158 | None:intergenic | 40.0% | |
| TGCCCAATTTATCACTAAGC+AGG | + | chr1.2:59626098-59626117 | None:intergenic | 40.0% | |
| TTACAGCTTGGATCTTCCAT+TGG | + | chr1.2:59626375-59626394 | None:intergenic | 40.0% | |
| TTGCAGATCAAGAGTTCTCA+AGG | + | chr1.2:59625140-59625159 | None:intergenic | 40.0% | |
| ! | AAAGGTTGGTTAGCAGAAGA+AGG | - | chr1.2:59627260-59627279 | MS.gene40803:CDS | 40.0% |
| ! | AAGGTTGGTTAGCAGAAGAA+GGG | - | chr1.2:59627261-59627280 | MS.gene40803:CDS | 40.0% |
| ! | CTAAGCAAGTGATGGAAACA+AGG | - | chr1.2:59625824-59625843 | MS.gene40803:CDS | 40.0% |
| ! | GTTTAGAAGCATGGAAGAAG+AGG | - | chr1.2:59627301-59627320 | MS.gene40803:intron | 40.0% |
| ! | TGAAGCCTTTGAAAATGGCT+TGG | - | chr1.2:59627391-59627410 | MS.gene40803:CDS | 40.0% |
| ! | TGATGATGAAGGGTGTGATA+AGG | - | chr1.2:59624745-59624764 | MS.gene40803:intron | 40.0% |
| ! | TTGTTGAAAGGTGCAAAGCA+TGG | - | chr1.2:59627207-59627226 | MS.gene40803:intron | 40.0% |
| !! | AGAACACCGTTCTATTTCTG+AGG | + | chr1.2:59625989-59626008 | None:intergenic | 40.0% |
| !! | TCTATTTCTGAGGCACATTG+AGG | + | chr1.2:59625979-59625998 | None:intergenic | 40.0% |
| !! | TTTGCTGGTTTGCCTAAGAA+CGG | + | chr1.2:59625416-59625435 | None:intergenic | 40.0% |
| AAGCATGGAAGAAGAGGTGA+TGG | - | chr1.2:59627307-59627326 | MS.gene40803:intron | 45.0% | |
| AAGGACATGAGCACTCCATT+GGG | - | chr1.2:59627347-59627366 | MS.gene40803:intron | 45.0% | |
| AAGTCAAGCCATCTACCCAA+TGG | + | chr1.2:59627365-59627384 | None:intergenic | 45.0% | |
| CAATGCCGAGGTTCAAAGTA+GGG | - | chr1.2:59625303-59625322 | MS.gene40803:intron | 45.0% | |
| CATACAGCATGACAGAAAGC+AGG | - | chr1.2:59625737-59625756 | MS.gene40803:CDS | 45.0% | |
| CATCAGTGATGAGGAAAGGT+TGG | - | chr1.2:59627246-59627265 | MS.gene40803:CDS | 45.0% | |
| CTCTGCTGCCTCCTAAAAAA+AGG | + | chr1.2:59626869-59626888 | None:intergenic | 45.0% | |
| CTGGTGTTTACCTGTGACAT+TGG | + | chr1.2:59624373-59624392 | None:intergenic | 45.0% | |
| GACAGTGAAGATAGCACATG+TGG | - | chr1.2:59626486-59626505 | MS.gene40803:CDS | 45.0% | |
| GATGTCGGAGTTTAGAAGCA+TGG | - | chr1.2:59627292-59627311 | MS.gene40803:intron | 45.0% | |
| GCAGGCAAGTTCTTGTTGAA+AGG | - | chr1.2:59627195-59627214 | MS.gene40803:intron | 45.0% | |
| GCATGGTATGCAACACATCA+AGG | - | chr1.2:59626046-59626065 | MS.gene40803:CDS | 45.0% | |
| GCCAACTCTCTTTGATCTGT+TGG | - | chr1.2:59627076-59627095 | MS.gene40803:intron | 45.0% | |
| GTCGACTACTAAGCAAGTGA+TGG | - | chr1.2:59625816-59625835 | MS.gene40803:CDS | 45.0% | |
| GTTCTTAGGCAAACCAGCAA+AGG | - | chr1.2:59625415-59625434 | MS.gene40803:intron | 45.0% | |
| TGAATCCAAACCCATGAGTC+CGG | + | chr1.2:59624786-59624805 | None:intergenic | 45.0% | |
| TGGCATGAATCAGCAACTTC+AGG | - | chr1.2:59626161-59626180 | MS.gene40803:CDS | 45.0% | |
| ! | AGAAGGGTACAAGGAGATGT+CGG | - | chr1.2:59627277-59627296 | MS.gene40803:intron | 45.0% |
| ! | AGGAGCACAATGTCTTCAGT+TGG | - | chr1.2:59625100-59625119 | MS.gene40803:intron | 45.0% |
| ! | GAAATGGGTTTAGCAGACCT+TGG | + | chr1.2:59624962-59624981 | None:intergenic | 45.0% |
| ! | GTTAGCAGAAGAAGGGTACA+AGG | - | chr1.2:59627268-59627287 | MS.gene40803:intron | 45.0% |
| !! | ATTTCTGAGGCACATTGAGG+TGG | + | chr1.2:59625976-59625995 | None:intergenic | 45.0% |
| !! | TTTCTGAGGCACATTGAGGT+GGG | + | chr1.2:59625975-59625994 | None:intergenic | 45.0% |
| !! | AAAAAATTAAAAGAAAAAAA+TGG | + | chr1.2:59624433-59624452 | None:intergenic | 5.0% |
| !!! | TTTTTTCTTTTAATTTTTTA+TGG | - | chr1.2:59624434-59624453 | MS.gene40803:CDS | 5.0% |
| ACTGATGCCACCATGCATCT+AGG | + | chr1.2:59627233-59627252 | None:intergenic | 50.0% | |
| CAAAGCATGGCCTAGATGCA+TGG | - | chr1.2:59627220-59627239 | MS.gene40803:intron | 50.0% | |
| CAAGGACATGAGCACTCCAT+TGG | - | chr1.2:59627346-59627365 | MS.gene40803:intron | 50.0% | |
| CCAATGCCGAGGTTCAAAGT+AGG | - | chr1.2:59625302-59625321 | MS.gene40803:intron | 50.0% | |
| CCTACTTTGAACCTCGGCAT+TGG | + | chr1.2:59625305-59625324 | None:intergenic | 50.0% | |
| CTGATGCCAGAAAGTTGCCA+AGG | + | chr1.2:59626277-59626296 | None:intergenic | 50.0% | |
| CTGTTGGAGAATCGGAGAAC+TGG | - | chr1.2:59627092-59627111 | MS.gene40803:intron | 50.0% | |
| GTGGCATCAGTGATGAGGAA+AGG | - | chr1.2:59627242-59627261 | MS.gene40803:CDS | 50.0% | |
| TGAGCACTCCATTGGGTAGA+TGG | - | chr1.2:59627354-59627373 | MS.gene40803:intron | 50.0% | |
| TGTAACACCATCCAATGCCG+AGG | - | chr1.2:59625291-59625310 | MS.gene40803:intron | 50.0% | |
| ! | CATGGAAGAAGAGGTGATGG+TGG | - | chr1.2:59627310-59627329 | MS.gene40803:intron | 50.0% |
| ! | CTTTGAACCTCGGCATTGGA+TGG | + | chr1.2:59625301-59625320 | None:intergenic | 50.0% |
| !! | GGCATCTGCTAAGAGCATTG+AGG | - | chr1.2:59625057-59625076 | MS.gene40803:intron | 50.0% |
| !! | GGTGGATGAGCTTGTTAGCA+AGG | - | chr1.2:59627328-59627347 | MS.gene40803:intron | 50.0% |
| !! | GTTTGTTATCGTCCTAGCGC+TGG | + | chr1.2:59625503-59625522 | None:intergenic | 50.0% |
| AGCATGGCCTAGATGCATGG+TGG | - | chr1.2:59627223-59627242 | MS.gene40803:CDS | 55.0% | |
| AGTAGCCGGACTCATGGGTT+TGG | - | chr1.2:59624778-59624797 | MS.gene40803:intron | 55.0% | |
| CAGAAAGTTCGACCAGCGCT+AGG | - | chr1.2:59625488-59625507 | MS.gene40803:CDS | 55.0% | |
| CGCAACACGGAACCAAGATG+AGG | - | chr1.2:59625176-59625195 | MS.gene40803:CDS | 55.0% | |
| CGTGATCAGAATGACGCACG+AGG | - | chr1.2:59625634-59625653 | MS.gene40803:CDS | 55.0% | |
| GCATGGTGGCATCAGTGATG+AGG | - | chr1.2:59627237-59627256 | MS.gene40803:CDS | 55.0% | |
| GCCAGAACAGCACCGTTCTT+AGG | - | chr1.2:59625401-59625420 | MS.gene40803:intron | 55.0% | |
| GGAGAATCGGAGAACTGGTG+TGG | - | chr1.2:59627097-59627116 | MS.gene40803:intron | 55.0% | |
| ! | AAGGGTGTGATAAGGCCCCA+GGG | - | chr1.2:59624753-59624772 | MS.gene40803:intron | 55.0% |
| !! | GCCTAAGAACGGTGCTGTTC+TGG | + | chr1.2:59625405-59625424 | None:intergenic | 55.0% |
| ATGAGTCCGGCTACTAGCCC+TGG | + | chr1.2:59624773-59624792 | None:intergenic | 60.0% | |
| TGAGTCCGGCTACTAGCCCT+GGG | + | chr1.2:59624772-59624791 | None:intergenic | 60.0% | |
| ! | AGGGCTAGTAGCCGGACTCA+TGG | - | chr1.2:59624772-59624791 | MS.gene40803:intron | 60.0% |
| ! | GAAGGGTGTGATAAGGCCCC+AGG | - | chr1.2:59624752-59624771 | MS.gene40803:intron | 60.0% |
| ! | GGGCTAGTAGCCGGACTCAT+GGG | - | chr1.2:59624773-59624792 | MS.gene40803:intron | 60.0% |
| GAGTCCGGCTACTAGCCCTG+GGG | + | chr1.2:59624771-59624790 | None:intergenic | 65.0% | |
| ! | AAGGCCCCAGGGCTAGTAGC+CGG | - | chr1.2:59624764-59624783 | MS.gene40803:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 59624136 | 59627478 | 59624136 | ID=MS.gene40803 |
| chr1.2 | mRNA | 59624136 | 59627478 | 59624136 | ID=MS.gene40803.t1;Parent=MS.gene40803 |
| chr1.2 | exon | 59627382 | 59627478 | 59627382 | ID=MS.gene40803.t1.exon1;Parent=MS.gene40803.t1 |
| chr1.2 | CDS | 59627382 | 59627478 | 59627382 | ID=cds.MS.gene40803.t1;Parent=MS.gene40803.t1 |
| chr1.2 | exon | 59627221 | 59627282 | 59627221 | ID=MS.gene40803.t1.exon2;Parent=MS.gene40803.t1 |
| chr1.2 | CDS | 59627221 | 59627282 | 59627221 | ID=cds.MS.gene40803.t1;Parent=MS.gene40803.t1 |
| chr1.2 | exon | 59625432 | 59626952 | 59625432 | ID=MS.gene40803.t1.exon3;Parent=MS.gene40803.t1 |
| chr1.2 | CDS | 59625432 | 59626952 | 59625432 | ID=cds.MS.gene40803.t1;Parent=MS.gene40803.t1 |
| chr1.2 | exon | 59625107 | 59625251 | 59625107 | ID=MS.gene40803.t1.exon4;Parent=MS.gene40803.t1 |
| chr1.2 | CDS | 59625107 | 59625251 | 59625107 | ID=cds.MS.gene40803.t1;Parent=MS.gene40803.t1 |
| chr1.2 | exon | 59624136 | 59624737 | 59624136 | ID=MS.gene40803.t1.exon5;Parent=MS.gene40803.t1 |
| chr1.2 | CDS | 59624136 | 59624737 | 59624136 | ID=cds.MS.gene40803.t1;Parent=MS.gene40803.t1 |
| Gene Sequence |
| Protein sequence |
