Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054400.t1 | XP_013450452.1 | 91.6 | 912 | 74 | 2 | 1 | 911 | 1 | 910 | 0.00E+00 | 1531.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054400.t1 | A0A072UFB2 | 91.6 | 912 | 74 | 2 | 1 | 911 | 1 | 910 | 0.0e+00 | 1531.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050755 | MS.gene054400 | 0.808932 | 2.43E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene072558 | MS.gene054400 | PPI |
| MS.gene45026 | MS.gene054400 | PPI |
| MS.gene40803 | MS.gene054400 | PPI |
| MS.gene44175 | MS.gene054400 | PPI |
| MS.gene054400 | MS.gene050959 | PPI |
| MS.gene050756 | MS.gene054400 | PPI |
| MS.gene054400 | MS.gene050756 | PPI |
| MS.gene005297 | MS.gene054400 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054400.t1 | MTR_7g112030 | 93.969 | 912 | 52 | 2 | 1 | 911 | 1 | 910 | 0.0 | 1749 |
| MS.gene054400.t1 | MTR_1g083850 | 46.269 | 871 | 333 | 26 | 55 | 911 | 1 | 750 | 0.0 | 591 |
| MS.gene054400.t1 | MTR_2g034810 | 32.988 | 964 | 542 | 29 | 2 | 909 | 6 | 921 | 5.36e-115 | 374 |
| MS.gene054400.t1 | MTR_7g082220 | 25.408 | 429 | 262 | 14 | 491 | 909 | 555 | 935 | 1.97e-19 | 94.4 |
| MS.gene054400.t1 | MTR_6g018770 | 25.333 | 450 | 244 | 16 | 481 | 909 | 500 | 878 | 1.25e-17 | 88.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054400.t1 | AT5G26910 | 31.142 | 928 | 515 | 22 | 1 | 909 | 4 | 826 | 1.41e-108 | 355 |
| MS.gene054400.t1 | AT5G26910 | 31.142 | 928 | 515 | 22 | 1 | 909 | 4 | 826 | 1.41e-108 | 355 |
| MS.gene054400.t1 | AT5G26910 | 31.142 | 928 | 514 | 22 | 1 | 909 | 4 | 825 | 3.53e-107 | 351 |
| MS.gene054400.t1 | AT5G26910 | 33.333 | 594 | 334 | 12 | 1 | 586 | 4 | 543 | 2.93e-65 | 231 |
| MS.gene054400.t1 | AT3G58650 | 34.740 | 616 | 307 | 26 | 1 | 598 | 4 | 542 | 5.98e-62 | 226 |
| MS.gene054400.t1 | AT3G58650 | 38.554 | 166 | 92 | 5 | 747 | 909 | 652 | 810 | 4.60e-29 | 125 |
| MS.gene054400.t1 | AT3G05750 | 34.057 | 599 | 324 | 20 | 1 | 585 | 7 | 548 | 7.15e-53 | 199 |
| MS.gene054400.t1 | AT3G05750 | 36.970 | 165 | 94 | 2 | 747 | 910 | 644 | 799 | 1.53e-24 | 110 |
| MS.gene054400.t1 | AT3G05750 | 34.220 | 564 | 303 | 19 | 33 | 585 | 34 | 540 | 6.55e-50 | 190 |
| MS.gene054400.t1 | AT3G05750 | 36.970 | 165 | 94 | 2 | 747 | 910 | 636 | 791 | 1.95e-24 | 110 |
| MS.gene054400.t1 | AT3G05750 | 33.466 | 502 | 270 | 18 | 91 | 585 | 1 | 445 | 1.26e-43 | 169 |
| MS.gene054400.t1 | AT3G05750 | 36.970 | 165 | 94 | 2 | 747 | 910 | 541 | 696 | 1.59e-24 | 110 |
| MS.gene054400.t1 | AT3G05750 | 33.466 | 502 | 270 | 18 | 91 | 585 | 1 | 445 | 1.26e-43 | 169 |
| MS.gene054400.t1 | AT3G05750 | 36.970 | 165 | 94 | 2 | 747 | 910 | 541 | 696 | 1.59e-24 | 110 |
Find 191 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCGGTTTGTATTTGGTTTC+TGG | 0.052036 | 7.4:+4433874 | None:intergenic |
| GTGAATCAGATTCGTTTATC+TGG | 0.198909 | 7.4:+4432048 | None:intergenic |
| ACTTGGCAACGCAGAGTTTA+TGG | 0.199809 | 7.4:-4431883 | MS.gene054400:CDS |
| AACTCGTGTTGTCGGCTTAT+TGG | 0.224076 | 7.4:+4433743 | None:intergenic |
| GGCAATGCTCGGTTTGTATT+TGG | 0.230061 | 7.4:+4433867 | None:intergenic |
| GGAATCAAGGGCACATAAAA+TGG | 0.235717 | 7.4:-4434465 | MS.gene054400:CDS |
| TCAAAGCTCTTCCATGTCTA+TGG | 0.251505 | 7.4:-4432000 | MS.gene054400:CDS |
| CAATGGTTTCAAATGGAAAT+AGG | 0.279755 | 7.4:-4433953 | MS.gene054400:CDS |
| TTGAGAAATATTATGTGTTT+TGG | 0.295276 | 7.4:+4433599 | None:intergenic |
| TTTGAAGAGTTGGCATTGTT+TGG | 0.301691 | 7.4:+4434146 | None:intergenic |
| AAAACTCTATTCCTCGTATA+TGG | 0.327299 | 7.4:+4434266 | None:intergenic |
| ATGTCAATGTTCAGCCTAAA+AGG | 0.330024 | 7.4:-4433665 | MS.gene054400:CDS |
| AATAACCTATTGTGAGTAAC+TGG | 0.338823 | 7.4:+4434380 | None:intergenic |
| ACATCAGGTACATCATATTA+TGG | 0.349028 | 7.4:-4431783 | MS.gene054400:CDS |
| GTTTCTTTAGCCTGTTTGAT+TGG | 0.353033 | 7.4:-4435409 | MS.gene054400:CDS |
| TTCATCTTGTTCCATGGTAT+TGG | 0.353410 | 7.4:+4433116 | None:intergenic |
| TCCAACAGATCAAAGAGATT+TGG | 0.354587 | 7.4:+4431819 | None:intergenic |
| TTAACAAGTAAAGGAAAATC+AGG | 0.359427 | 7.4:-4434020 | MS.gene054400:CDS |
| AAATCATTTCTTTCATGATC+AGG | 0.359480 | 7.4:+4433534 | None:intergenic |
| TACCGGAATCAAAGTTCTAT+AGG | 0.363901 | 7.4:-4434892 | MS.gene054400:CDS |
| TCTTGATTTGAAAGAGAGAT+TGG | 0.364775 | 7.4:-4434210 | MS.gene054400:CDS |
| TGAATTGATGTCACCCATCT+AGG | 0.368625 | 7.4:+4431657 | None:intergenic |
| CATTATAATGAGGGTGCTCT+TGG | 0.377568 | 7.4:-4434563 | MS.gene054400:CDS |
| AATGACATGAGCACTGGATA+TGG | 0.378953 | 7.4:-4431546 | MS.gene054400:CDS |
| GATTTGGTGTTGACTCTCTT+GGG | 0.382883 | 7.4:-4433341 | MS.gene054400:CDS |
| GCCAAATCTCTTTGATCTGT+TGG | 0.383800 | 7.4:-4431820 | MS.gene054400:CDS |
| GTCAACACCAAATCTAGTTC+TGG | 0.386085 | 7.4:+4433350 | None:intergenic |
| GTTGCAAATCATGGCCTAGA+TGG | 0.388615 | 7.4:-4431671 | MS.gene054400:CDS |
| TTAAGTCGGAGAAGTCTTCT+TGG | 0.388727 | 7.4:-4434496 | MS.gene054400:CDS |
| TGGTTTGACTTAATCTCATT+CGG | 0.390079 | 7.4:+4433909 | None:intergenic |
| CATCAACTGCAGAAGTTTCA+AGG | 0.394024 | 7.4:-4434940 | MS.gene054400:intron |
| TTGAAGAGTTGGCATTGTTT+GGG | 0.398308 | 7.4:+4434147 | None:intergenic |
| AGATTTGGTGTTGACTCTCT+TGG | 0.399113 | 7.4:-4433342 | MS.gene054400:CDS |
| ATTACATGAGCTGCATTCTT+CGG | 0.400753 | 7.4:+4434326 | None:intergenic |
| TAGAAACTTGGAAGATGTAA+TGG | 0.401841 | 7.4:-4431586 | MS.gene054400:CDS |
| AGAAAACCATTACTCTTGAT+TGG | 0.403562 | 7.4:+4434353 | None:intergenic |
| GTACCAGCACATTGCCATTA+CGG | 0.403636 | 7.4:+4433826 | None:intergenic |
| CTAGATCTCAAACCAGTAGA+AGG | 0.406206 | 7.4:+4433171 | None:intergenic |
| GAAGATGAAACTCGTGTTGT+CGG | 0.408487 | 7.4:+4433735 | None:intergenic |
| AATCTCGTAAGAAGCTCGTT+TGG | 0.415531 | 7.4:-4435379 | MS.gene054400:CDS |
| AGTAGCTAGACTAATGGGTT+TGG | 0.415757 | 7.4:-4434657 | MS.gene054400:CDS |
| TTCTGTCAGTGAAAGTTACT+TGG | 0.418753 | 7.4:-4432628 | MS.gene054400:CDS |
| GTTTCTGGCTCCTTGTGAGC+TGG | 0.419501 | 7.4:+4433889 | None:intergenic |
| CCATTCCAGTTACTCACAAT+AGG | 0.420132 | 7.4:-4434385 | MS.gene054400:CDS |
| TTTGAAATCTCTTGAGTGAC+TGG | 0.420568 | 7.4:+4434438 | None:intergenic |
| ATCTAGCATGGAAGAATAAA+CGG | 0.422941 | 7.4:+4432091 | None:intergenic |
| GGAGCAAGTCCGAGTAATAT+AGG | 0.423629 | 7.4:-4434740 | MS.gene054400:CDS |
| TTTATGTGCCCTTGATTCCA+TGG | 0.428294 | 7.4:+4434469 | None:intergenic |
| TGATGCATTGAGTGTCTTGT+TGG | 0.428531 | 7.4:-4433259 | MS.gene054400:CDS |
| CTCGGGCACACTTCTCTTCA+AGG | 0.429593 | 7.4:+4433404 | None:intergenic |
| TCATCTTCAGAAAGTTCTAC+TGG | 0.430240 | 7.4:-4433720 | MS.gene054400:CDS |
| TAGATAAAGGTGGATGAGAA+TGG | 0.432322 | 7.4:-4434761 | MS.gene054400:CDS |
| ATGGAAACCAGAACTAGATT+TGG | 0.433236 | 7.4:-4433357 | MS.gene054400:CDS |
| GGAATGGGTTTAGCCGACTT+TGG | 0.433498 | 7.4:+4434401 | None:intergenic |
| TATTCTCATTTAACAAGTAA+AGG | 0.433553 | 7.4:-4434029 | MS.gene054400:CDS |
| ACCGGAATCAAAGTTCTATA+GGG | 0.434864 | 7.4:-4434891 | MS.gene054400:intron |
| GGGTTAGTAGCTAGACTAAT+GGG | 0.436466 | 7.4:-4434662 | MS.gene054400:CDS |
| GAAGAGGGGTCAGAGGTTGA+AGG | 0.439614 | 7.4:-4431492 | MS.gene054400:CDS |
| ATGATTAACATTACCAGGTA+AGG | 0.444021 | 7.4:+4435346 | None:intergenic |
| GCAAGACAAAGCATCCAGTA+TGG | 0.444703 | 7.4:-4433145 | MS.gene054400:CDS |
| AGAAGGCTCCTCTGAGATTA+CGG | 0.445668 | 7.4:+4433188 | None:intergenic |
| AATGAAAGTGGAAATGATCT+AGG | 0.445864 | 7.4:-4432690 | MS.gene054400:CDS |
| TCATGCTTCTCATTATAATG+AGG | 0.446452 | 7.4:-4434573 | MS.gene054400:CDS |
| ATTTAGAATTCCAATCAAAC+AGG | 0.448534 | 7.4:+4435399 | None:intergenic |
| CAAAGGTACATCATCATTCA+AGG | 0.450037 | 7.4:-4434090 | MS.gene054400:CDS |
| TTGTTGGAAGTTGCAAATCA+TGG | 0.451707 | 7.4:-4431680 | MS.gene054400:CDS |
| ATCTCAGAGGAGCCTTCTAC+TGG | 0.456510 | 7.4:-4433183 | MS.gene054400:CDS |
| CTATTGTGAGTAACTGGAAT+GGG | 0.457459 | 7.4:+4434386 | None:intergenic |
| AACTCTTCAAATTGTAAGCC+TGG | 0.458250 | 7.4:-4434134 | MS.gene054400:CDS |
| GGAAAATCTAGAGACCTTAC+CGG | 0.458686 | 7.4:-4434909 | MS.gene054400:CDS |
| GACAGTGAAGACAGTGCATA+TGG | 0.458972 | 7.4:-4432606 | MS.gene054400:intron |
| TTGTACAGACATCAGAAGTA+AGG | 0.461314 | 7.4:-4432737 | MS.gene054400:intron |
| GCGGCTGCTAAGATAATTGA+TGG | 0.467501 | 7.4:-4434299 | MS.gene054400:CDS |
| AGGCTTACAATTTGAAGAGT+TGG | 0.467696 | 7.4:+4434136 | None:intergenic |
| TCATCAGTTTGTAGTGATGA+GGG | 0.470024 | 7.4:-4434704 | MS.gene054400:CDS |
| CGGGTTAGTAGCTAGACTAA+TGG | 0.470161 | 7.4:-4434663 | MS.gene054400:CDS |
| TGCTGATTCATGTTAAGCAC+TGG | 0.476068 | 7.4:+4433036 | None:intergenic |
| TAAGTCGGAGAAGTCTTCTT+GGG | 0.478430 | 7.4:-4434495 | MS.gene054400:CDS |
| TTCCATCACTTGCTCGGCAG+AGG | 0.481154 | 7.4:+4433374 | None:intergenic |
| CAAAGCTCTTCCATGTCTAT+GGG | 0.483022 | 7.4:-4431999 | MS.gene054400:CDS |
| TTTGGATTCTTTGCCAACTT+CGG | 0.483220 | 7.4:-4434639 | MS.gene054400:CDS |
| TTTGTAGTGATGAGGGGTGT+GGG | 0.483558 | 7.4:-4434697 | MS.gene054400:CDS |
| GGTTGTCAGCATTCTGATGC+TGG | 0.486477 | 7.4:-4432669 | MS.gene054400:CDS |
| AGAGATACAATGGTTTCAAA+TGG | 0.487273 | 7.4:-4433960 | MS.gene054400:CDS |
| CTCGGCAGAGGATAGTGACT+CGG | 0.487665 | 7.4:+4433386 | None:intergenic |
| CATGCTTCTCATTATAATGA+GGG | 0.487956 | 7.4:-4434572 | MS.gene054400:CDS |
| TGATCAGGACTTCTTGCCTC+AGG | 0.489473 | 7.4:+4433549 | None:intergenic |
| TTTCAAATCAAGAATTCTCA+AGG | 0.489682 | 7.4:+4434220 | None:intergenic |
| GGTATTGGTGATAACCATAC+TGG | 0.490445 | 7.4:+4433131 | None:intergenic |
| TGAATCAGATTCGTTTATCT+GGG | 0.491141 | 7.4:+4432049 | None:intergenic |
| TGAGCACTGGATATGGGAAA+TGG | 0.491726 | 7.4:-4431539 | MS.gene054400:CDS |
| TGGAACAATCAAACCTTACC+TGG | 0.493911 | 7.4:-4435359 | MS.gene054400:intron |
| GAGAACCATCAGAGTACATC+AGG | 0.496191 | 7.4:-4431798 | MS.gene054400:CDS |
| GAACATTTCATCTTGTTCCA+TGG | 0.496613 | 7.4:+4433110 | None:intergenic |
| GTCGACTAGCTTTCTAGACA+TGG | 0.496834 | 7.4:+4434169 | None:intergenic |
| ACCCTATAGAACTTTGATTC+CGG | 0.497405 | 7.4:+4434890 | None:intergenic |
| CTTGGGATGCCATGGAATCA+AGG | 0.497669 | 7.4:-4434478 | MS.gene054400:CDS |
| CATGTCTATGGGGCAATATG+TGG | 0.498871 | 7.4:-4431988 | MS.gene054400:CDS |
| TCACTCTAAGCTTGAAAGGA+AGG | 0.500517 | 7.4:-4431754 | MS.gene054400:CDS |
| TTGTCTCCAATCAAGAGTAA+TGG | 0.505640 | 7.4:-4434359 | MS.gene054400:CDS |
| AACTGCAGAAGTTTCAAGGC+AGG | 0.506503 | 7.4:-4434936 | MS.gene054400:intron |
| CTATTCCTCGTATATGGCTG+AGG | 0.507488 | 7.4:+4434272 | None:intergenic |
| ATAATGAGAAGCATGAAAGT+TGG | 0.511372 | 7.4:+4434580 | None:intergenic |
| AGCTCACCGACGTCCGAAGT+TGG | 0.511646 | 7.4:+4434626 | None:intergenic |
| GCCTAAAAGGTCAAGCTCTA+GGG | 0.513483 | 7.4:-4433652 | MS.gene054400:CDS |
| TCTGGTTTCCATCACTTGCT+CGG | 0.514344 | 7.4:+4433368 | None:intergenic |
| AGCCTAAAAGGTCAAGCTCT+AGG | 0.514877 | 7.4:-4433653 | MS.gene054400:CDS |
| GAATATGTACAGAAAATACT+TGG | 0.515552 | 7.4:-4431900 | MS.gene054400:CDS |
| GAAGAATGCAGCTCATGTAA+TGG | 0.515627 | 7.4:-4434324 | MS.gene054400:CDS |
| TTCATCAGTTTGTAGTGATG+AGG | 0.517539 | 7.4:-4434705 | MS.gene054400:CDS |
| GACATTGAAGCATTTGAAGA+GGG | 0.520513 | 7.4:-4431507 | MS.gene054400:CDS |
| ATCCTCTGCCGAGCAAGTGA+TGG | 0.524003 | 7.4:-4433376 | MS.gene054400:CDS |
| AAGAGGGGTCAGAGGTTGAA+GGG | 0.526933 | 7.4:-4431491 | MS.gene054400:CDS |
| TCGGACGTCGGTGAGCTCTC+CGG | 0.532203 | 7.4:-4434620 | MS.gene054400:CDS |
| GAAGACTTCTCCGACTTAAG+TGG | 0.533144 | 7.4:+4434500 | None:intergenic |
| GGGTGTGGGAGTAAAGCTCC+CGG | 0.536026 | 7.4:-4434683 | MS.gene054400:CDS |
| TGAGGGTGCTCTTGGTTCCA+TGG | 0.538624 | 7.4:-4434555 | MS.gene054400:CDS |
| ATGACATGAGCACTGGATAT+GGG | 0.538932 | 7.4:-4431545 | MS.gene054400:CDS |
| AGATACTTCTTCATCTAGCA+TGG | 0.540273 | 7.4:+4432079 | None:intergenic |
| GTCTGCAATGACATGAGCAC+TGG | 0.540768 | 7.4:-4431552 | MS.gene054400:CDS |
| ATAGAACTTTGATTCCGGTA+AGG | 0.546952 | 7.4:+4434895 | None:intergenic |
| GTTTGTAGTGATGAGGGGTG+TGG | 0.551029 | 7.4:-4434698 | MS.gene054400:CDS |
| ATGGGTTTAGCCGACTTTGG+AGG | 0.553218 | 7.4:+4434404 | None:intergenic |
| GATGGGTGACATCAATTCAA+AGG | 0.554306 | 7.4:-4431653 | MS.gene054400:CDS |
| CATCAGTTTGTAGTGATGAG+GGG | 0.554353 | 7.4:-4434703 | MS.gene054400:CDS |
| AAAACGTGTGCAAACCGTAA+TGG | 0.554411 | 7.4:-4433840 | MS.gene054400:CDS |
| CATTAGTCTAGCTACTAACC+CGG | 0.555448 | 7.4:+4434664 | None:intergenic |
| AAGTTCTACTGGAGTCAGAA+AGG | 0.557721 | 7.4:-4433709 | MS.gene054400:CDS |
| AGTCAGAAAGGCAACAAACA+AGG | 0.557842 | 7.4:-4433697 | MS.gene054400:CDS |
| CCTATTGTGAGTAACTGGAA+TGG | 0.558950 | 7.4:+4434385 | None:intergenic |
| TTGCAAATCATGGCCTAGAT+GGG | 0.560806 | 7.4:-4431670 | MS.gene054400:CDS |
| AGTCCGAGTAATATAGGAAG+TGG | 0.562286 | 7.4:-4434734 | MS.gene054400:CDS |
| AAGATCACTCTAAGCTTGAA+AGG | 0.562316 | 7.4:-4431758 | MS.gene054400:CDS |
| TCACTATCTATCATATGTGT+CGG | 0.564183 | 7.4:+4433279 | None:intergenic |
| ATGGCAGAAGAATTTGTCAT+GGG | 0.564588 | 7.4:-4431864 | MS.gene054400:CDS |
| TGTAGCAGCAACAATGAAAG+TGG | 0.564981 | 7.4:-4432702 | MS.gene054400:CDS |
| AGACTGTTTGATTGATGAGA+TGG | 0.565226 | 7.4:-4431460 | MS.gene054400:CDS |
| GAAGTCTTCTTGGGATGCCA+TGG | 0.565368 | 7.4:-4434486 | MS.gene054400:CDS |
| CACATATTGCCCCATAGACA+TGG | 0.565694 | 7.4:+4431989 | None:intergenic |
| CGTTCAAAGCAGAGATACAA+TGG | 0.565930 | 7.4:-4433970 | MS.gene054400:CDS |
| TTGGGATGCCATGGAATCAA+GGG | 0.569801 | 7.4:-4434477 | MS.gene054400:CDS |
| TGAAATGTTGCCTCCAAAGT+CGG | 0.572372 | 7.4:-4434414 | MS.gene054400:CDS |
| AGAAGTTTCAAGGCAGGGAA+AGG | 0.573539 | 7.4:-4434930 | MS.gene054400:CDS |
| CAAAATAGTATGACTTCCAA+AGG | 0.573557 | 7.4:-4433789 | MS.gene054400:CDS |
| TGCAGCTCATGTAATGGAGG+CGG | 0.575246 | 7.4:-4434318 | MS.gene054400:CDS |
| TCGGGCACACTTCTCTTCAA+GGG | 0.577563 | 7.4:+4433405 | None:intergenic |
| GGAGCTGAATAGTGAAGCAC+CGG | 0.578587 | 7.4:+4434601 | None:intergenic |
| TATGGCAGAAGAATTTGTCA+TGG | 0.581714 | 7.4:-4431865 | MS.gene054400:CDS |
| TTCAAATCAAGAATTCTCAA+GGG | 0.586162 | 7.4:+4434221 | None:intergenic |
| TGACATTGAAGCATTTGAAG+AGG | 0.587741 | 7.4:-4431508 | MS.gene054400:CDS |
| TTAAGTCAAACCAGCTCACA+AGG | 0.593311 | 7.4:-4433899 | MS.gene054400:CDS |
| CTTAAACACACCACTTAAGT+CGG | 0.594149 | 7.4:-4434510 | MS.gene054400:CDS |
| CGCACGACGATAGTCATCCA+TGG | 0.595188 | 7.4:+4434538 | None:intergenic |
| ACATTGAAGCATTTGAAGAG+GGG | 0.596973 | 7.4:-4431506 | MS.gene054400:CDS |
| AAATTAGAACTCCTCTCACC+AGG | 0.597036 | 7.4:+4434116 | None:intergenic |
| CACTTGAAAATGAAGTGACA+TGG | 0.597864 | 7.4:-4432028 | MS.gene054400:CDS |
| GTGGCTGTCACACAAATATG+TGG | 0.598071 | 7.4:-4431969 | MS.gene054400:CDS |
| AATATGTGGAACACCAAACA+TGG | 0.598654 | 7.4:-4431955 | MS.gene054400:CDS |
| TAACATGAATCAGCAACTGC+AGG | 0.601446 | 7.4:-4433028 | MS.gene054400:intron |
| TATTCCTCGTATATGGCTGA+GGG | 0.603780 | 7.4:+4434273 | None:intergenic |
| TGTACAGACATCAGAAGTAA+GGG | 0.605254 | 7.4:-4432736 | MS.gene054400:intron |
| AGCATTTGAAGAGGGGTCAG+AGG | 0.607202 | 7.4:-4431499 | MS.gene054400:CDS |
| TCGGCAGAGGATAGTGACTC+GGG | 0.608484 | 7.4:+4433387 | None:intergenic |
| GGTGACATCAATTCAAAGGA+AGG | 0.612539 | 7.4:-4431649 | MS.gene054400:CDS |
| TCTTTGCCAACTTCGGACGT+CGG | 0.617948 | 7.4:-4434632 | MS.gene054400:CDS |
| ACTGCAGAAGTTTCAAGGCA+GGG | 0.617971 | 7.4:-4434935 | MS.gene054400:intron |
| TCGCCACTTCCTATATTACT+CGG | 0.618342 | 7.4:+4434731 | None:intergenic |
| AGAGGGGTCAGAGGTTGAAG+GGG | 0.626738 | 7.4:-4431490 | MS.gene054400:CDS |
| AAACCGTAATGGCAATGTGC+TGG | 0.628053 | 7.4:-4433829 | MS.gene054400:CDS |
| CTATCGCTGTTGTTCAAGTG+AGG | 0.630068 | 7.4:-4433061 | MS.gene054400:CDS |
| TCGACTAGCTTTCTAGACAT+GGG | 0.631265 | 7.4:+4434170 | None:intergenic |
| AAACTTGGAAGATGTAATGG+TGG | 0.636219 | 7.4:-4431583 | MS.gene054400:CDS |
| AAAGGTACATCATCATTCAA+GGG | 0.636259 | 7.4:-4434089 | MS.gene054400:CDS |
| ATGTACCTGATGTACTCTGA+TGG | 0.636993 | 7.4:+4431793 | None:intergenic |
| ACATGAGCTGCATTCTTCGG+CGG | 0.637093 | 7.4:+4434329 | None:intergenic |
| AAGTAACTTTCACTGACAGA+AGG | 0.643645 | 7.4:+4432630 | None:intergenic |
| TTTGGCAGATGAGTTGTACA+GGG | 0.646788 | 7.4:-4431622 | MS.gene054400:CDS |
| GAATGCAGCTCATGTAATGG+AGG | 0.646804 | 7.4:-4434321 | MS.gene054400:CDS |
| GTCAGAAAGGCAACAAACAA+GGG | 0.647142 | 7.4:-4433696 | MS.gene054400:CDS |
| TAGGGCAATCAATAACCGAA+AGG | 0.649794 | 7.4:-4433634 | MS.gene054400:CDS |
| TTTCAAAATATCAAGCGACA+TGG | 0.652102 | 7.4:-4431928 | MS.gene054400:CDS |
| TATGGTTATCACCAATACCA+TGG | 0.652792 | 7.4:-4433127 | MS.gene054400:CDS |
| GGTGTGGGAGTAAAGCTCCC+GGG | 0.662258 | 7.4:-4434682 | MS.gene054400:CDS |
| TGACAGCAGAGGTGTTCCTG+AGG | 0.669852 | 7.4:-4433565 | MS.gene054400:CDS |
| CAAATTGTAAGCCTGGTGAG+AGG | 0.672573 | 7.4:-4434127 | MS.gene054400:CDS |
| ATTAGTCTAGCTACTAACCC+GGG | 0.683901 | 7.4:+4434665 | None:intergenic |
| AAAGCTCTTCCATGTCTATG+GGG | 0.687339 | 7.4:-4431998 | MS.gene054400:CDS |
| CATGGATGACTATCGTCGTG+CGG | 0.707839 | 7.4:-4434537 | MS.gene054400:CDS |
| GAAGCCCTCAGCCATATACG+AGG | 0.718262 | 7.4:-4434277 | MS.gene054400:CDS |
| TCAGTGTACCGTAATCTCAG+AGG | 0.719931 | 7.4:-4433196 | MS.gene054400:CDS |
| TCTGAGATTACGGTACACTG+AGG | 0.805122 | 7.4:+4433198 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAGCTAAAAACATATTA+TGG | + | chr7.4:4431714-4431733 | None:intergenic | 15.0% |
| !!! | AATTGTAAAATTGCATTTTA+TGG | + | chr7.4:4433374-4433393 | None:intergenic | 15.0% |
| !!! | ATTGAAATTGTTTTAGATAA+AGG | - | chr7.4:4432097-4432116 | MS.gene054400:CDS | 15.0% |
| !!! | ATTTTTGAAAAATGTATAGA+AGG | + | chr7.4:4434400-4434419 | None:intergenic | 15.0% |
| !!! | CAATTTTATATGTATTACAA+GGG | + | chr7.4:4434724-4434743 | None:intergenic | 15.0% |
| !!! | GTAAAATAATTTTACACTAA+AGG | + | chr7.4:4434497-4434516 | None:intergenic | 15.0% |
| !!! | TTTGATTTATTTTTTTGGTT+TGG | - | chr7.4:4432072-4432091 | MS.gene054400:CDS | 15.0% |
| !! | AACAATTATTCTCAGTAAAT+TGG | + | chr7.4:4434004-4434023 | None:intergenic | 20.0% |
| !! | TATTCTCATTTAACAAGTAA+AGG | - | chr7.4:4432842-4432861 | MS.gene054400:intron | 20.0% |
| !!! | AAATATTATGTGTTTTGGAT+GGG | + | chr7.4:4433270-4433289 | None:intergenic | 20.0% |
| !!! | AAATGCAATTTTACAATTGA+TGG | - | chr7.4:4433376-4433395 | MS.gene054400:CDS | 20.0% |
| !!! | GCAATTTTATATGTATTACA+AGG | + | chr7.4:4434725-4434744 | None:intergenic | 20.0% |
| !!! | TTGAGAAATATTATGTGTTT+TGG | + | chr7.4:4433275-4433294 | None:intergenic | 20.0% |
| ! | AAAAATGTATAGAAGGCTAA+AGG | + | chr7.4:4434393-4434412 | None:intergenic | 25.0% |
| ! | AAATCATTTCTTTCATGATC+AGG | + | chr7.4:4433340-4433359 | None:intergenic | 25.0% |
| ! | AATCACATCTCATATATGTT+AGG | - | chr7.4:4434528-4434547 | MS.gene054400:CDS | 25.0% |
| ! | ATACTCAGTTTCATATGTAA+TGG | - | chr7.4:4433891-4433910 | MS.gene054400:CDS | 25.0% |
| ! | ATAGCTTACACGAAAATATT+TGG | - | chr7.4:4431772-4431791 | MS.gene054400:CDS | 25.0% |
| ! | CATATTTGTTCATCAATGTT+TGG | - | chr7.4:4434653-4434672 | MS.gene054400:CDS | 25.0% |
| ! | GAATAATATATGACCATGTT+TGG | + | chr7.4:4431866-4431885 | None:intergenic | 25.0% |
| ! | GAATATGTACAGAAAATACT+TGG | - | chr7.4:4434971-4434990 | MS.gene054400:intron | 25.0% |
| ! | GTAAGAAGTAAAAAGTAAAC+AGG | + | chr7.4:4434350-4434369 | None:intergenic | 25.0% |
| ! | TTAACAAGTAAAGGAAAATC+AGG | - | chr7.4:4432851-4432870 | MS.gene054400:intron | 25.0% |
| ! | TTCAAATCAAGAATTCTCAA+GGG | + | chr7.4:4432653-4432672 | None:intergenic | 25.0% |
| ! | TTTCAAATCAAGAATTCTCA+AGG | + | chr7.4:4432654-4432673 | None:intergenic | 25.0% |
| !! | ATTTAGAATTCCAATCAAAC+AGG | + | chr7.4:4431475-4431494 | None:intergenic | 25.0% |
| !! | GTAACAGAAACATTTAGAAT+AGG | + | chr7.4:4431912-4431931 | None:intergenic | 25.0% |
| !! | TGAGTCTAATTTTCCAAATT+AGG | - | chr7.4:4434048-4434067 | MS.gene054400:CDS | 25.0% |
| !!! | AATATTATGTGTTTTGGATG+GGG | + | chr7.4:4433269-4433288 | None:intergenic | 25.0% |
| !!! | ATAGCAATAATTTTTTGGGA+TGG | + | chr7.4:4433570-4433589 | None:intergenic | 25.0% |
| !!! | ATATTGTTTTGACTATGTGT+TGG | + | chr7.4:4433974-4433993 | None:intergenic | 25.0% |
| !!! | ATTTTGAAATCTACCATGTT+TGG | + | chr7.4:4434932-4434951 | None:intergenic | 25.0% |
| !!! | CTTTGAGATCAAAACAAATA+AGG | + | chr7.4:4434317-4434336 | None:intergenic | 25.0% |
| !!! | GAAATATTATGTGTTTTGGA+TGG | + | chr7.4:4433271-4433290 | None:intergenic | 25.0% |
| !!! | GAAATTGTTTTAGATAAAGG+TGG | - | chr7.4:4432100-4432119 | MS.gene054400:CDS | 25.0% |
| !!! | GGAGATAGCAATAATTTTTT+GGG | + | chr7.4:4433574-4433593 | None:intergenic | 25.0% |
| !!! | TTTTGAAGTTGATTTACCTT+TGG | + | chr7.4:4433101-4433120 | None:intergenic | 25.0% |
| AAAAAACAGACAGCAAAAAG+TGG | + | chr7.4:4432020-4432039 | None:intergenic | 30.0% | |
| AAAAACAGACAGCAAAAAGT+GGG | + | chr7.4:4432019-4432038 | None:intergenic | 30.0% | |
| AAAACTCTATTCCTCGTATA+TGG | + | chr7.4:4432608-4432627 | None:intergenic | 30.0% | |
| AATAACCTATTGTGAGTAAC+TGG | + | chr7.4:4432494-4432513 | None:intergenic | 30.0% | |
| AATGAAAGTGGAAATGATCT+AGG | - | chr7.4:4434181-4434200 | MS.gene054400:CDS | 30.0% | |
| ACATCAGGTACATCATATTA+TGG | - | chr7.4:4435088-4435107 | MS.gene054400:intron | 30.0% | |
| AGAAAACCATTACTCTTGAT+TGG | + | chr7.4:4432521-4432540 | None:intergenic | 30.0% | |
| AGAATGTTAGAGAGAGTTTA+CGG | - | chr7.4:4431670-4431689 | MS.gene054400:CDS | 30.0% | |
| AGAGATACAATGGTTTCAAA+TGG | - | chr7.4:4432911-4432930 | MS.gene054400:intron | 30.0% | |
| AGATCATCATGTGATTTGAT+TGG | - | chr7.4:4434569-4434588 | MS.gene054400:CDS | 30.0% | |
| ATCTAGCATGGAAGAATAAA+CGG | + | chr7.4:4434783-4434802 | None:intergenic | 30.0% | |
| ATGATTAACATTACCAGGTA+AGG | + | chr7.4:4431528-4431547 | None:intergenic | 30.0% | |
| ATGGAGAAAAAACGTTCAAA+AGG | - | chr7.4:4431437-4431456 | MS.gene054400:CDS | 30.0% | |
| ATGTTTATCTTTCCCTTCAA+TGG | - | chr7.4:4434290-4434309 | MS.gene054400:CDS | 30.0% | |
| CAAAATAGTATGACTTCCAA+AGG | - | chr7.4:4433082-4433101 | MS.gene054400:CDS | 30.0% | |
| CAATGGTTTCAAATGGAAAT+AGG | - | chr7.4:4432918-4432937 | MS.gene054400:intron | 30.0% | |
| CATGCTTCTCATTATAATGA+GGG | - | chr7.4:4432299-4432318 | MS.gene054400:intron | 30.0% | |
| GATCATCATGTGATTTGATT+GGG | - | chr7.4:4434570-4434589 | MS.gene054400:CDS | 30.0% | |
| GGAAAATTAGACTCAGTAAA+TGG | + | chr7.4:4434043-4434062 | None:intergenic | 30.0% | |
| TAGAAACTTGGAAGATGTAA+TGG | - | chr7.4:4435285-4435304 | MS.gene054400:intron | 30.0% | |
| TCAAATAAGTCAAACCAAAC+AGG | + | chr7.4:4431623-4431642 | None:intergenic | 30.0% | |
| TCACTATCTATCATATGTGT+CGG | + | chr7.4:4433595-4433614 | None:intergenic | 30.0% | |
| TCATGCTTCTCATTATAATG+AGG | - | chr7.4:4432298-4432317 | MS.gene054400:intron | 30.0% | |
| TGAATCAGATTCGTTTATCT+GGG | + | chr7.4:4434825-4434844 | None:intergenic | 30.0% | |
| TGTTTATCTTTCCCTTCAAT+GGG | - | chr7.4:4434291-4434310 | MS.gene054400:CDS | 30.0% | |
| TTTCAAAATATCAAGCGACA+TGG | - | chr7.4:4434943-4434962 | MS.gene054400:intron | 30.0% | |
| ! | AAAGGTACATCATCATTCAA+GGG | - | chr7.4:4432782-4432801 | MS.gene054400:intron | 30.0% |
| ! | AATTCAAAGGAAGGACTTTT+TGG | - | chr7.4:4435231-4435250 | MS.gene054400:intron | 30.0% |
| ! | AGATGTGAAAAAGCTTTTGT+TGG | - | chr7.4:4435175-4435194 | MS.gene054400:intron | 30.0% |
| ! | ATAATGAGAAGCATGAAAGT+TGG | + | chr7.4:4432294-4432313 | None:intergenic | 30.0% |
| ! | TCTTGATTTGAAAGAGAGAT+TGG | - | chr7.4:4432661-4432680 | MS.gene054400:CDS | 30.0% |
| ! | TGGTTTGACTTAATCTCATT+CGG | + | chr7.4:4432965-4432984 | None:intergenic | 30.0% |
| !! | AGGAGTTCTAATTTTGACAA+AGG | - | chr7.4:4432764-4432783 | MS.gene054400:intron | 30.0% |
| !! | ATATTATGTGTTTTGGATGG+GGG | + | chr7.4:4433268-4433287 | None:intergenic | 30.0% |
| !! | TGTTTGGTTTGACTTATTTG+AGG | - | chr7.4:4431622-4431641 | MS.gene054400:CDS | 30.0% |
| !!! | CGGAGATAGCAATAATTTTT+TGG | + | chr7.4:4433575-4433594 | None:intergenic | 30.0% |
| !!! | GATGATGAGTTTTAGAAACT+TGG | - | chr7.4:4435273-4435292 | MS.gene054400:intron | 30.0% |
| AAAACAGACAGCAAAAAGTG+GGG | + | chr7.4:4432018-4432037 | None:intergenic | 35.0% | |
| AAACAAATAAGGCCCATTGA+AGG | + | chr7.4:4434306-4434325 | None:intergenic | 35.0% | |
| AAACCAAACAGGTCCTAAAT+AGG | + | chr7.4:4431612-4431631 | None:intergenic | 35.0% | |
| AAACTGCAGACAACCTAATT+TGG | + | chr7.4:4434064-4434083 | None:intergenic | 35.0% | |
| AAACTTGGAAGATGTAATGG+TGG | - | chr7.4:4435288-4435307 | MS.gene054400:intron | 35.0% | |
| AACAAATAAGGCCCATTGAA+GGG | + | chr7.4:4434305-4434324 | None:intergenic | 35.0% | |
| AACTCTTCAAATTGTAAGCC+TGG | - | chr7.4:4432737-4432756 | MS.gene054400:intron | 35.0% | |
| AAGATCACTCTAAGCTTGAA+AGG | - | chr7.4:4435113-4435132 | MS.gene054400:intron | 35.0% | |
| AAGTAACTTTCACTGACAGA+AGG | + | chr7.4:4434244-4434263 | None:intergenic | 35.0% | |
| AATATGTGGAACACCAAACA+TGG | - | chr7.4:4434916-4434935 | MS.gene054400:CDS | 35.0% | |
| ACCCTATAGAACTTTGATTC+CGG | + | chr7.4:4431984-4432003 | None:intergenic | 35.0% | |
| ACCGGAATCAAAGTTCTATA+GGG | - | chr7.4:4431980-4431999 | MS.gene054400:CDS | 35.0% | |
| AGACTGTTTGATTGATGAGA+TGG | - | chr7.4:4435411-4435430 | MS.gene054400:CDS | 35.0% | |
| AGATACTTCTTCATCTAGCA+TGG | + | chr7.4:4434795-4434814 | None:intergenic | 35.0% | |
| AGGCTTACAATTTGAAGAGT+TGG | + | chr7.4:4432738-4432757 | None:intergenic | 35.0% | |
| ATAGAACTTTGATTCCGGTA+AGG | + | chr7.4:4431979-4431998 | None:intergenic | 35.0% | |
| ATGGAAACCAGAACTAGATT+TGG | - | chr7.4:4433514-4433533 | MS.gene054400:CDS | 35.0% | |
| ATGGCAGAAGAATTTGTCAT+GGG | - | chr7.4:4435007-4435026 | MS.gene054400:intron | 35.0% | |
| ATGGCATGATTAACATTACC+AGG | + | chr7.4:4431533-4431552 | None:intergenic | 35.0% | |
| ATGTCAATGTTCAGCCTAAA+AGG | - | chr7.4:4433206-4433225 | MS.gene054400:CDS | 35.0% | |
| ATTACATGAGCTGCATTCTT+CGG | + | chr7.4:4432548-4432567 | None:intergenic | 35.0% | |
| CACTTGAAAATGAAGTGACA+TGG | - | chr7.4:4434843-4434862 | MS.gene054400:intron | 35.0% | |
| CATGATGATCTCACTTTGTT+AGG | + | chr7.4:4434560-4434579 | None:intergenic | 35.0% | |
| CGGAAAAGCAACAAATTTCA+TGG | + | chr7.4:4434692-4434711 | None:intergenic | 35.0% | |
| CTAACAAGTTTGTAACACAC+AGG | + | chr7.4:4434457-4434476 | None:intergenic | 35.0% | |
| CTATTGTGAGTAACTGGAAT+GGG | + | chr7.4:4432488-4432507 | None:intergenic | 35.0% | |
| CTTAAACACACCACTTAAGT+CGG | - | chr7.4:4432361-4432380 | MS.gene054400:intron | 35.0% | |
| GAAAACAGGAAGAAACTGAT+CGG | + | chr7.4:4434752-4434771 | None:intergenic | 35.0% | |
| GAACATTTCATCTTGTTCCA+TGG | + | chr7.4:4433764-4433783 | None:intergenic | 35.0% | |
| GTGAATCAGATTCGTTTATC+TGG | + | chr7.4:4434826-4434845 | None:intergenic | 35.0% | |
| GTTTCTTTAGCCTGTTTGAT+TGG | - | chr7.4:4431462-4431481 | MS.gene054400:CDS | 35.0% | |
| TACCGGAATCAAAGTTCTAT+AGG | - | chr7.4:4431979-4431998 | MS.gene054400:CDS | 35.0% | |
| TAGATAAAGGTGGATGAGAA+TGG | - | chr7.4:4432110-4432129 | MS.gene054400:intron | 35.0% | |
| TATGGCAGAAGAATTTGTCA+TGG | - | chr7.4:4435006-4435025 | MS.gene054400:intron | 35.0% | |
| TATGGTTATCACCAATACCA+TGG | - | chr7.4:4433744-4433763 | MS.gene054400:CDS | 35.0% | |
| TCATCAGTTTGTAGTGATGA+GGG | - | chr7.4:4432167-4432186 | MS.gene054400:intron | 35.0% | |
| TCATCTTCAGAAAGTTCTAC+TGG | - | chr7.4:4433151-4433170 | MS.gene054400:CDS | 35.0% | |
| TCCAACAGATCAAAGAGATT+TGG | + | chr7.4:4435055-4435074 | None:intergenic | 35.0% | |
| TGCTTAGTTATGTCCAAACA+TGG | - | chr7.4:4431850-4431869 | MS.gene054400:CDS | 35.0% | |
| TGTACAGACATCAGAAGTAA+GGG | - | chr7.4:4434135-4434154 | MS.gene054400:CDS | 35.0% | |
| TTCATCAGTTTGTAGTGATG+AGG | - | chr7.4:4432166-4432185 | MS.gene054400:intron | 35.0% | |
| TTCATCTTGTTCCATGGTAT+TGG | + | chr7.4:4433758-4433777 | None:intergenic | 35.0% | |
| TTCTGTCAGTGAAAGTTACT+TGG | - | chr7.4:4434243-4434262 | MS.gene054400:CDS | 35.0% | |
| TTGAAGAGTTGGCATTGTTT+GGG | + | chr7.4:4432727-4432746 | None:intergenic | 35.0% | |
| TTGTACAGACATCAGAAGTA+AGG | - | chr7.4:4434134-4434153 | MS.gene054400:CDS | 35.0% | |
| TTGTCTCCAATCAAGAGTAA+TGG | - | chr7.4:4432512-4432531 | MS.gene054400:intron | 35.0% | |
| TTGTTGGAAGTTGCAAATCA+TGG | - | chr7.4:4435191-4435210 | MS.gene054400:intron | 35.0% | |
| TTTGAAGAGTTGGCATTGTT+TGG | + | chr7.4:4432728-4432747 | None:intergenic | 35.0% | |
| TTTGGATTCTTTGCCAACTT+CGG | - | chr7.4:4432232-4432251 | MS.gene054400:intron | 35.0% | |
| ! | AAGAAAAAGTATGACAGCAG+AGG | - | chr7.4:4433295-4433314 | MS.gene054400:CDS | 35.0% |
| ! | ACATTGAAGCATTTGAAGAG+GGG | - | chr7.4:4435365-4435384 | MS.gene054400:CDS | 35.0% |
| ! | ATCAGTTTCTTCCTGTTTTC+AGG | - | chr7.4:4434752-4434771 | MS.gene054400:CDS | 35.0% |
| ! | CAAAGGTACATCATCATTCA+AGG | - | chr7.4:4432781-4432800 | MS.gene054400:intron | 35.0% |
| ! | GACATTGAAGCATTTGAAGA+GGG | - | chr7.4:4435364-4435383 | MS.gene054400:CDS | 35.0% |
| ! | TATTACAAGGGCATATGCTA+CGG | + | chr7.4:4434712-4434731 | None:intergenic | 35.0% |
| ! | TGACATTGAAGCATTTGAAG+AGG | - | chr7.4:4435363-4435382 | MS.gene054400:CDS | 35.0% |
| ! | TTTGAAATCTCTTGAGTGAC+TGG | + | chr7.4:4432436-4432455 | None:intergenic | 35.0% |
| !! | ACGAGGAATAGAGTTTTATC+AGG | - | chr7.4:4432611-4432630 | MS.gene054400:CDS | 35.0% |
| !! | AGGAATAGAGTTTTATCAGG+CGG | - | chr7.4:4432614-4432633 | MS.gene054400:CDS | 35.0% |
| !! | CTTTTTCACATCTCAACTCT+AGG | + | chr7.4:4435168-4435187 | None:intergenic | 35.0% |
| !! | TCTGCTTTGAACGTTGTTTT+TGG | + | chr7.4:4432894-4432913 | None:intergenic | 35.0% |
| !! | TTTTGACTATGTGTTGGACT+TGG | + | chr7.4:4433968-4433987 | None:intergenic | 35.0% |
| !!! | TTGTTTTTGGCTTGCATTGT+AGG | + | chr7.4:4432881-4432900 | None:intergenic | 35.0% |
| AAAACGTGTGCAAACCGTAA+TGG | - | chr7.4:4433031-4433050 | MS.gene054400:CDS | 40.0% | |
| AAACAGACAGCAAAAAGTGG+GGG | + | chr7.4:4432017-4432036 | None:intergenic | 40.0% | |
| AAAGCTCTTCCATGTCTATG+GGG | - | chr7.4:4434873-4434892 | MS.gene054400:intron | 40.0% | |
| AAATTAGAACTCCTCTCACC+AGG | + | chr7.4:4432758-4432777 | None:intergenic | 40.0% | |
| AACACACAGGTGCAACATAA+AGG | + | chr7.4:4434444-4434463 | None:intergenic | 40.0% | |
| AAGCTATCTTGTAGAGCTCA+TGG | + | chr7.4:4431738-4431757 | None:intergenic | 40.0% | |
| AAGTTCTACTGGAGTCAGAA+AGG | - | chr7.4:4433162-4433181 | MS.gene054400:CDS | 40.0% | |
| AATCTCGTAAGAAGCTCGTT+TGG | - | chr7.4:4431492-4431511 | MS.gene054400:CDS | 40.0% | |
| ACATTAGAGAGAGAGAGACA+TGG | + | chr7.4:4431552-4431571 | None:intergenic | 40.0% | |
| AGTCAGAAAGGCAACAAACA+AGG | - | chr7.4:4433174-4433193 | MS.gene054400:CDS | 40.0% | |
| AGTCCGAGTAATATAGGAAG+TGG | - | chr7.4:4432137-4432156 | MS.gene054400:intron | 40.0% | |
| ATGTACCTGATGTACTCTGA+TGG | + | chr7.4:4435081-4435100 | None:intergenic | 40.0% | |
| CAAAGCTCTTCCATGTCTAT+GGG | - | chr7.4:4434872-4434891 | MS.gene054400:intron | 40.0% | |
| CATCAACTGCAGAAGTTTCA+AGG | - | chr7.4:4431931-4431950 | MS.gene054400:CDS | 40.0% | |
| CATCAGTTTGTAGTGATGAG+GGG | - | chr7.4:4432168-4432187 | MS.gene054400:intron | 40.0% | |
| CCATTCCAGTTACTCACAAT+AGG | - | chr7.4:4432486-4432505 | MS.gene054400:intron | 40.0% | |
| CCTATTGTGAGTAACTGGAA+TGG | + | chr7.4:4432489-4432508 | None:intergenic | 40.0% | |
| CGTTCAAAGCAGAGATACAA+TGG | - | chr7.4:4432901-4432920 | MS.gene054400:intron | 40.0% | |
| CTAGATCTCAAACCAGTAGA+AGG | + | chr7.4:4433703-4433722 | None:intergenic | 40.0% | |
| GAAGAATGCAGCTCATGTAA+TGG | - | chr7.4:4432547-4432566 | MS.gene054400:intron | 40.0% | |
| GAAGATGAAACTCGTGTTGT+CGG | + | chr7.4:4433139-4433158 | None:intergenic | 40.0% | |
| GATGGGTGACATCAATTCAA+AGG | - | chr7.4:4435218-4435237 | MS.gene054400:intron | 40.0% | |
| GCCAAATCTCTTTGATCTGT+TGG | - | chr7.4:4435051-4435070 | MS.gene054400:intron | 40.0% | |
| GGAAAATCTAGAGACCTTAC+CGG | - | chr7.4:4431962-4431981 | MS.gene054400:CDS | 40.0% | |
| GGTGACATCAATTCAAAGGA+AGG | - | chr7.4:4435222-4435241 | MS.gene054400:intron | 40.0% | |
| GTCAGAAAGGCAACAAACAA+GGG | - | chr7.4:4433175-4433194 | MS.gene054400:CDS | 40.0% | |
| TAACATGAATCAGCAACTGC+AGG | - | chr7.4:4433843-4433862 | MS.gene054400:CDS | 40.0% | |
| TAAGTCGGAGAAGTCTTCTT+GGG | - | chr7.4:4432376-4432395 | MS.gene054400:intron | 40.0% | |
| TAGGGCAATCAATAACCGAA+AGG | - | chr7.4:4433237-4433256 | MS.gene054400:CDS | 40.0% | |
| TATTCCTCGTATATGGCTGA+GGG | + | chr7.4:4432601-4432620 | None:intergenic | 40.0% | |
| TCAAAGCTCTTCCATGTCTA+TGG | - | chr7.4:4434871-4434890 | MS.gene054400:intron | 40.0% | |
| TCACTCTAAGCTTGAAAGGA+AGG | - | chr7.4:4435117-4435136 | MS.gene054400:intron | 40.0% | |
| TCGCCACTTCCTATATTACT+CGG | + | chr7.4:4432143-4432162 | None:intergenic | 40.0% | |
| TGAAATGTTGCCTCCAAAGT+CGG | - | chr7.4:4432457-4432476 | MS.gene054400:intron | 40.0% | |
| TGAATTGATGTCACCCATCT+AGG | + | chr7.4:4435217-4435236 | None:intergenic | 40.0% | |
| TGATGCATTGAGTGTCTTGT+TGG | - | chr7.4:4433612-4433631 | MS.gene054400:CDS | 40.0% | |
| TGGAACAATCAAACCTTACC+TGG | - | chr7.4:4431512-4431531 | MS.gene054400:CDS | 40.0% | |
| TGTAGCAGCAACAATGAAAG+TGG | - | chr7.4:4434169-4434188 | MS.gene054400:CDS | 40.0% | |
| TTAAGTCAAACCAGCTCACA+AGG | - | chr7.4:4432972-4432991 | MS.gene054400:intron | 40.0% | |
| TTAAGTCGGAGAAGTCTTCT+TGG | - | chr7.4:4432375-4432394 | MS.gene054400:intron | 40.0% | |
| TTGCAAATCATGGCCTAGAT+GGG | - | chr7.4:4435201-4435220 | MS.gene054400:intron | 40.0% | |
| TTGCCTTTGTCCACCTATTT+AGG | - | chr7.4:4431596-4431615 | MS.gene054400:CDS | 40.0% | |
| TTTATGTGCCCTTGATTCCA+TGG | + | chr7.4:4432405-4432424 | None:intergenic | 40.0% | |
| TTTGGCAGATGAGTTGTACA+GGG | - | chr7.4:4435249-4435268 | MS.gene054400:intron | 40.0% | |
| ! | ATTAGTCTAGCTACTAACCC+GGG | + | chr7.4:4432209-4432228 | None:intergenic | 40.0% |
| ! | CATTAGTCTAGCTACTAACC+CGG | + | chr7.4:4432210-4432229 | None:intergenic | 40.0% |
| ! | CTCGGTTTGTATTTGGTTTC+TGG | + | chr7.4:4433000-4433019 | None:intergenic | 40.0% |
| ! | GGAATCAAGGGCACATAAAA+TGG | - | chr7.4:4432406-4432425 | MS.gene054400:intron | 40.0% |
| ! | GGGTTAGTAGCTAGACTAAT+GGG | - | chr7.4:4432209-4432228 | MS.gene054400:intron | 40.0% |
| ! | GTCAACACCAAATCTAGTTC+TGG | + | chr7.4:4433524-4433543 | None:intergenic | 40.0% |
| ! | TTTTGGCAGATGAGTTGTAC+AGG | - | chr7.4:4435248-4435267 | MS.gene054400:intron | 40.0% |
| !! | AATGACATGAGCACTGGATA+TGG | - | chr7.4:4435325-4435344 | MS.gene054400:intron | 40.0% |
| !! | AGATTTGGTGTTGACTCTCT+TGG | - | chr7.4:4433529-4433548 | MS.gene054400:CDS | 40.0% |
| !! | AGTAGCTAGACTAATGGGTT+TGG | - | chr7.4:4432214-4432233 | MS.gene054400:intron | 40.0% |
| !! | ATGACATGAGCACTGGATAT+GGG | - | chr7.4:4435326-4435345 | MS.gene054400:intron | 40.0% |
| !! | CATTATAATGAGGGTGCTCT+TGG | - | chr7.4:4432308-4432327 | MS.gene054400:intron | 40.0% |
| !! | GATTTGGTGTTGACTCTCTT+GGG | - | chr7.4:4433530-4433549 | MS.gene054400:CDS | 40.0% |
| !! | GGAATAGAGTTTTATCAGGC+GGG | - | chr7.4:4432615-4432634 | MS.gene054400:CDS | 40.0% |
| !! | GGTATTGGTGATAACCATAC+TGG | + | chr7.4:4433743-4433762 | None:intergenic | 40.0% |
| !! | TCGACTAGCTTTCTAGACAT+GGG | + | chr7.4:4432704-4432723 | None:intergenic | 40.0% |
| !! | TGCTGATTCATGTTAAGCAC+TGG | + | chr7.4:4433838-4433857 | None:intergenic | 40.0% |
| AAACCGTAATGGCAATGTGC+TGG | - | chr7.4:4433042-4433061 | MS.gene054400:CDS | 45.0% | |
| AACAGACAGCAAAAAGTGGG+GGG | + | chr7.4:4432016-4432035 | None:intergenic | 45.0% | |
| AACTGCAGAAGTTTCAAGGC+AGG | - | chr7.4:4431935-4431954 | MS.gene054400:CDS | 45.0% | |
| ACTGCAGAAGTTTCAAGGCA+GGG | - | chr7.4:4431936-4431955 | MS.gene054400:CDS | 45.0% | |
| ACTTGGCAACGCAGAGTTTA+TGG | - | chr7.4:4434988-4435007 | MS.gene054400:intron | 45.0% | |
| AGAAGTTTCAAGGCAGGGAA+AGG | - | chr7.4:4431941-4431960 | MS.gene054400:CDS | 45.0% | |
| AGCCTAAAAGGTCAAGCTCT+AGG | - | chr7.4:4433218-4433237 | MS.gene054400:CDS | 45.0% | |
| CAAATTGTAAGCCTGGTGAG+AGG | - | chr7.4:4432744-4432763 | MS.gene054400:intron | 45.0% | |
| CACATATTGCCCCATAGACA+TGG | + | chr7.4:4434885-4434904 | None:intergenic | 45.0% | |
| CATGTCTATGGGGCAATATG+TGG | - | chr7.4:4434883-4434902 | MS.gene054400:intron | 45.0% | |
| CCAAACAGGTCCTAAATAGG+TGG | + | chr7.4:4431609-4431628 | None:intergenic | 45.0% | |
| CTATCGCTGTTGTTCAAGTG+AGG | - | chr7.4:4433810-4433829 | MS.gene054400:CDS | 45.0% | |
| CTATTCCTCGTATATGGCTG+AGG | + | chr7.4:4432602-4432621 | None:intergenic | 45.0% | |
| GAAGACTTCTCCGACTTAAG+TGG | + | chr7.4:4432374-4432393 | None:intergenic | 45.0% | |
| GAATGCAGCTCATGTAATGG+AGG | - | chr7.4:4432550-4432569 | MS.gene054400:intron | 45.0% | |
| GACAGTGAAGACAGTGCATA+TGG | - | chr7.4:4434265-4434284 | MS.gene054400:CDS | 45.0% | |
| GAGAACCATCAGAGTACATC+AGG | - | chr7.4:4435073-4435092 | MS.gene054400:intron | 45.0% | |
| GCCTAAAAGGTCAAGCTCTA+GGG | - | chr7.4:4433219-4433238 | MS.gene054400:CDS | 45.0% | |
| GCGGCTGCTAAGATAATTGA+TGG | - | chr7.4:4432572-4432591 | MS.gene054400:intron | 45.0% | |
| GGAGCAAGTCCGAGTAATAT+AGG | - | chr7.4:4432131-4432150 | MS.gene054400:intron | 45.0% | |
| GGTCCTAAATAGGTGGACAA+AGG | + | chr7.4:4431602-4431621 | None:intergenic | 45.0% | |
| GTACCAGCACATTGCCATTA+CGG | + | chr7.4:4433048-4433067 | None:intergenic | 45.0% | |
| GTGGCTGTCACACAAATATG+TGG | - | chr7.4:4434902-4434921 | MS.gene054400:CDS | 45.0% | |
| GTTGCAAATCATGGCCTAGA+TGG | - | chr7.4:4435200-4435219 | MS.gene054400:intron | 45.0% | |
| TAGACTCAGTAAATGGCGTG+TGG | + | chr7.4:4434036-4434055 | None:intergenic | 45.0% | |
| TCAGTGTACCGTAATCTCAG+AGG | - | chr7.4:4433675-4433694 | MS.gene054400:CDS | 45.0% | |
| TTGGGATGCCATGGAATCAA+GGG | - | chr7.4:4432394-4432413 | MS.gene054400:intron | 45.0% | |
| ! | CCACCTATTTAGGACCTGTT+TGG | - | chr7.4:4431606-4431625 | MS.gene054400:CDS | 45.0% |
| ! | GCAAGACAAAGCATCCAGTA+TGG | - | chr7.4:4433726-4433745 | MS.gene054400:CDS | 45.0% |
| ! | GGCAATGCTCGGTTTGTATT+TGG | + | chr7.4:4433007-4433026 | None:intergenic | 45.0% |
| ! | TCTGAGATTACGGTACACTG+AGG | + | chr7.4:4433676-4433695 | None:intergenic | 45.0% |
| ! | TCTGGTTTCCATCACTTGCT+CGG | + | chr7.4:4433506-4433525 | None:intergenic | 45.0% |
| ! | TTTGTAGTGATGAGGGGTGT+GGG | - | chr7.4:4432174-4432193 | MS.gene054400:intron | 45.0% |
| !! | AACTCGTGTTGTCGGCTTAT+TGG | + | chr7.4:4433131-4433150 | None:intergenic | 45.0% |
| !! | AGAAGGCTCCTCTGAGATTA+CGG | + | chr7.4:4433686-4433705 | None:intergenic | 45.0% |
| !! | CGGGTTAGTAGCTAGACTAA+TGG | - | chr7.4:4432208-4432227 | MS.gene054400:intron | 45.0% |
| !! | GTCGACTAGCTTTCTAGACA+TGG | + | chr7.4:4432705-4432724 | None:intergenic | 45.0% |
| !! | TGAGCACTGGATATGGGAAA+TGG | - | chr7.4:4435332-4435351 | MS.gene054400:intron | 45.0% |
| !!! | TTTTATTTGATTTATTTTTT+TGG | - | chr7.4:4432067-4432086 | MS.gene054400:CDS | 5.0% |
| AAGAGGGGTCAGAGGTTGAA+GGG | - | chr7.4:4435380-4435399 | MS.gene054400:CDS | 50.0% | |
| ACATGAGCTGCATTCTTCGG+CGG | + | chr7.4:4432545-4432564 | None:intergenic | 50.0% | |
| AGCATTTGAAGAGGGGTCAG+AGG | - | chr7.4:4435372-4435391 | MS.gene054400:CDS | 50.0% | |
| ATCTCAGAGGAGCCTTCTAC+TGG | - | chr7.4:4433688-4433707 | MS.gene054400:CDS | 50.0% | |
| CAGGAAGAAACTGATCGGCA+CGG | + | chr7.4:4434747-4434766 | None:intergenic | 50.0% | |
| CATGGATGACTATCGTCGTG+CGG | - | chr7.4:4432334-4432353 | MS.gene054400:intron | 50.0% | |
| CTTGGGATGCCATGGAATCA+AGG | - | chr7.4:4432393-4432412 | MS.gene054400:intron | 50.0% | |
| GAAGTCTTCTTGGGATGCCA+TGG | - | chr7.4:4432385-4432404 | MS.gene054400:intron | 50.0% | |
| GGAGCTGAATAGTGAAGCAC+CGG | + | chr7.4:4432273-4432292 | None:intergenic | 50.0% | |
| GGTTGTCAGCATTCTGATGC+TGG | - | chr7.4:4434202-4434221 | MS.gene054400:CDS | 50.0% | |
| GTCTGCAATGACATGAGCAC+TGG | - | chr7.4:4435319-4435338 | MS.gene054400:intron | 50.0% | |
| GTTTGTAGTGATGAGGGGTG+TGG | - | chr7.4:4432173-4432192 | MS.gene054400:intron | 50.0% | |
| TCGGGCACACTTCTCTTCAA+GGG | + | chr7.4:4433469-4433488 | None:intergenic | 50.0% | |
| TCTTTGCCAACTTCGGACGT+CGG | - | chr7.4:4432239-4432258 | MS.gene054400:intron | 50.0% | |
| TGATCAGGACTTCTTGCCTC+AGG | + | chr7.4:4433325-4433344 | None:intergenic | 50.0% | |
| TGGATGGGGGAAACTCCTTT+CGG | + | chr7.4:4433255-4433274 | None:intergenic | 50.0% | |
| ! | ACGTTTTCTGCGGCAATGCT+CGG | + | chr7.4:4433018-4433037 | None:intergenic | 50.0% |
| ! | ATGGGTTTAGCCGACTTTGG+AGG | + | chr7.4:4432470-4432489 | None:intergenic | 50.0% |
| ! | CGGTTTGCACACGTTTTCTG+CGG | + | chr7.4:4433028-4433047 | None:intergenic | 50.0% |
| ! | GCCCTAGAGCTTGACCTTTT+AGG | + | chr7.4:4433223-4433242 | None:intergenic | 50.0% |
| ! | GGAATGGGTTTAGCCGACTT+TGG | + | chr7.4:4432473-4432492 | None:intergenic | 50.0% |
| ! | TGCAGCTCATGTAATGGAGG+CGG | - | chr7.4:4432553-4432572 | MS.gene054400:intron | 50.0% |
| !! | AAACGGTGCTGCCTGAAAAC+AGG | + | chr7.4:4434766-4434785 | None:intergenic | 50.0% |
| AGAGGGGTCAGAGGTTGAAG+GGG | - | chr7.4:4435381-4435400 | MS.gene054400:CDS | 55.0% | |
| ATCCTCTGCCGAGCAAGTGA+TGG | - | chr7.4:4433495-4433514 | MS.gene054400:CDS | 55.0% | |
| CGCACGACGATAGTCATCCA+TGG | + | chr7.4:4432336-4432355 | None:intergenic | 55.0% | |
| CTCGGCAGAGGATAGTGACT+CGG | + | chr7.4:4433488-4433507 | None:intergenic | 55.0% | |
| CTCGGGCACACTTCTCTTCA+AGG | + | chr7.4:4433470-4433489 | None:intergenic | 55.0% | |
| GAAGAGGGGTCAGAGGTTGA+AGG | - | chr7.4:4435379-4435398 | MS.gene054400:CDS | 55.0% | |
| GAAGCCCTCAGCCATATACG+AGG | - | chr7.4:4432594-4432613 | MS.gene054400:intron | 55.0% | |
| TCGGCAGAGGATAGTGACTC+GGG | + | chr7.4:4433487-4433506 | None:intergenic | 55.0% | |
| TTCCATCACTTGCTCGGCAG+AGG | + | chr7.4:4433500-4433519 | None:intergenic | 55.0% | |
| !! | GTTTCTGGCTCCTTGTGAGC+TGG | + | chr7.4:4432985-4433004 | None:intergenic | 55.0% |
| !! | TGACAGCAGAGGTGTTCCTG+AGG | - | chr7.4:4433306-4433325 | MS.gene054400:CDS | 55.0% |
| !! | TGAGGGTGCTCTTGGTTCCA+TGG | - | chr7.4:4432316-4432335 | MS.gene054400:intron | 55.0% |
| AGCTCACCGACGTCCGAAGT+TGG | + | chr7.4:4432248-4432267 | None:intergenic | 60.0% | |
| GGGTGTGGGAGTAAAGCTCC+CGG | - | chr7.4:4432188-4432207 | MS.gene054400:intron | 60.0% | |
| GGTGTGGGAGTAAAGCTCCC+GGG | - | chr7.4:4432189-4432208 | MS.gene054400:intron | 60.0% | |
| TCGGACGTCGGTGAGCTCTC+CGG | - | chr7.4:4432251-4432270 | MS.gene054400:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 4431437 | 4435456 | 4431437 | ID=MS.gene054400 |
| chr7.4 | mRNA | 4431437 | 4435456 | 4431437 | ID=MS.gene054400.t1;Parent=MS.gene054400 |
| chr7.4 | exon | 4435360 | 4435456 | 4435360 | ID=MS.gene054400.t1.exon1;Parent=MS.gene054400.t1 |
| chr7.4 | CDS | 4435360 | 4435456 | 4435360 | ID=cds.MS.gene054400.t1;Parent=MS.gene054400.t1 |
| chr7.4 | exon | 4434892 | 4434950 | 4434892 | ID=MS.gene054400.t1.exon2;Parent=MS.gene054400.t1 |
| chr7.4 | CDS | 4434892 | 4434950 | 4434892 | ID=cds.MS.gene054400.t1;Parent=MS.gene054400.t1 |
| chr7.4 | exon | 4433029 | 4434780 | 4433029 | ID=MS.gene054400.t1.exon3;Parent=MS.gene054400.t1 |
| chr7.4 | CDS | 4433029 | 4434780 | 4433029 | ID=cds.MS.gene054400.t1;Parent=MS.gene054400.t1 |
| chr7.4 | exon | 4432607 | 4432751 | 4432607 | ID=MS.gene054400.t1.exon4;Parent=MS.gene054400.t1 |
| chr7.4 | CDS | 4432607 | 4432751 | 4432607 | ID=cds.MS.gene054400.t1;Parent=MS.gene054400.t1 |
| chr7.4 | exon | 4431437 | 4432119 | 4431437 | ID=MS.gene054400.t1.exon5;Parent=MS.gene054400.t1 |
| chr7.4 | CDS | 4431437 | 4432119 | 4431437 | ID=cds.MS.gene054400.t1;Parent=MS.gene054400.t1 |
| Gene Sequence |
| Protein sequence |
