Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072558.t1 | XP_013450452.1 | 89.5 | 912 | 93 | 2 | 1 | 911 | 1 | 910 | 0.00E+00 | 1498.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072558.t1 | A0A072UFB2 | 89.5 | 912 | 93 | 2 | 1 | 911 | 1 | 910 | 0.0e+00 | 1498.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049695 | MS.gene072558 | 0.810995 | 8.73E-51 | -1.69E-46 |
| MS.gene050438 | MS.gene072558 | 0.805438 | 1.33E-49 | -1.69E-46 |
| MS.gene050478 | MS.gene072558 | 0.815696 | 8.10E-52 | -1.69E-46 |
| MS.gene050546 | MS.gene072558 | 0.80973 | 1.64E-50 | -1.69E-46 |
| MS.gene050719 | MS.gene072558 | 0.822138 | 2.78E-53 | -1.69E-46 |
| MS.gene050721 | MS.gene072558 | 0.818764 | 1.65E-52 | -1.69E-46 |
| MS.gene050724 | MS.gene072558 | 0.812634 | 3.84E-51 | -1.69E-46 |
| MS.gene050755 | MS.gene072558 | 0.865941 | 4.10E-65 | -1.69E-46 |
| MS.gene050959 | MS.gene072558 | 0.985847 | 7.38E-165 | -1.69E-46 |
| MS.gene052020 | MS.gene072558 | 0.823413 | 1.40E-53 | -1.69E-46 |
| MS.gene052323 | MS.gene072558 | 0.810059 | 1.39E-50 | -1.69E-46 |
| MS.gene052611 | MS.gene072558 | 0.808452 | 3.08E-50 | -1.69E-46 |
| MS.gene052665 | MS.gene072558 | 0.827224 | 1.76E-54 | -1.69E-46 |
| MS.gene053144 | MS.gene072558 | 0.80004 | 1.74E-48 | -1.69E-46 |
| MS.gene053221 | MS.gene072558 | 0.809592 | 1.75E-50 | -1.69E-46 |
| MS.gene054467 | MS.gene072558 | 0.800597 | 1.34E-48 | -1.69E-46 |
| MS.gene054550 | MS.gene072558 | 0.803116 | 4.06E-49 | -1.69E-46 |
| MS.gene054584 | MS.gene072558 | 0.80769 | 4.47E-50 | -1.69E-46 |
| MS.gene055465 | MS.gene072558 | 0.808508 | 2.99E-50 | -1.69E-46 |
| MS.gene055466 | MS.gene072558 | 0.813467 | 2.52E-51 | -1.69E-46 |
| MS.gene056643 | MS.gene072558 | 0.822796 | 1.96E-53 | -1.69E-46 |
| MS.gene057469 | MS.gene072558 | 0.809599 | 1.75E-50 | -1.69E-46 |
| MS.gene058168 | MS.gene072558 | 0.814834 | 1.26E-51 | -1.69E-46 |
| MS.gene059725 | MS.gene072558 | 0.801798 | 7.60E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene072558 | MS.gene054400 | PPI |
| MS.gene072558 | MS.gene005297 | PPI |
| MS.gene072558 | MS.gene44175 | PPI |
| MS.gene072558 | MS.gene40803 | PPI |
| MS.gene072558 | MS.gene050959 | PPI |
| MS.gene45026 | MS.gene072558 | PPI |
| MS.gene072558 | MS.gene45026 | PPI |
| MS.gene072558 | MS.gene050756 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072558.t1 | MTR_7g112030 | 93.969 | 912 | 52 | 2 | 1 | 911 | 1 | 910 | 0.0 | 1754 |
| MS.gene072558.t1 | MTR_1g083850 | 46.154 | 871 | 334 | 26 | 55 | 911 | 1 | 750 | 0.0 | 586 |
| MS.gene072558.t1 | MTR_2g034810 | 32.710 | 963 | 546 | 28 | 2 | 909 | 6 | 921 | 9.47e-114 | 370 |
| MS.gene072558.t1 | MTR_7g082220 | 25.408 | 429 | 262 | 14 | 491 | 909 | 555 | 935 | 1.14e-19 | 95.1 |
| MS.gene072558.t1 | MTR_6g018770 | 25.051 | 491 | 265 | 19 | 449 | 909 | 461 | 878 | 1.40e-17 | 88.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072558.t1 | AT5G26910 | 31.155 | 918 | 528 | 21 | 1 | 909 | 4 | 826 | 1.19e-106 | 350 |
| MS.gene072558.t1 | AT5G26910 | 31.155 | 918 | 528 | 21 | 1 | 909 | 4 | 826 | 1.19e-106 | 350 |
| MS.gene072558.t1 | AT5G26910 | 31.155 | 918 | 527 | 21 | 1 | 909 | 4 | 825 | 2.61e-105 | 346 |
| MS.gene072558.t1 | AT3G58650 | 32.051 | 936 | 480 | 39 | 1 | 909 | 4 | 810 | 2.08e-92 | 311 |
| MS.gene072558.t1 | AT5G26910 | 32.997 | 594 | 336 | 12 | 1 | 586 | 4 | 543 | 1.90e-63 | 226 |
| MS.gene072558.t1 | AT3G05750 | 33.665 | 603 | 321 | 19 | 1 | 585 | 7 | 548 | 2.20e-52 | 197 |
| MS.gene072558.t1 | AT3G05750 | 36.970 | 165 | 94 | 2 | 747 | 910 | 644 | 799 | 2.57e-24 | 110 |
| MS.gene072558.t1 | AT3G05750 | 34.336 | 565 | 301 | 20 | 33 | 585 | 34 | 540 | 2.91e-49 | 188 |
| MS.gene072558.t1 | AT3G05750 | 36.970 | 165 | 94 | 2 | 747 | 910 | 636 | 791 | 3.64e-24 | 109 |
| MS.gene072558.t1 | AT3G05750 | 33.598 | 503 | 268 | 19 | 91 | 585 | 1 | 445 | 6.92e-43 | 167 |
| MS.gene072558.t1 | AT3G05750 | 36.970 | 165 | 94 | 2 | 747 | 910 | 541 | 696 | 2.82e-24 | 109 |
| MS.gene072558.t1 | AT3G05750 | 33.598 | 503 | 268 | 19 | 91 | 585 | 1 | 445 | 6.92e-43 | 167 |
| MS.gene072558.t1 | AT3G05750 | 36.970 | 165 | 94 | 2 | 747 | 910 | 541 | 696 | 2.82e-24 | 109 |
Find 189 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCGGTTTGTATTTGGTTTC+TGG | 0.052036 | 7.3:+4420663 | None:intergenic |
| ACTTGGCAACACAGAGTTTA+TGG | 0.185619 | 7.3:-4418672 | MS.gene072558:CDS |
| GTGAATCAGATTCGTTTATC+TGG | 0.198909 | 7.3:+4418837 | None:intergenic |
| AACTCGTGTTGTCGGCTTAT+TGG | 0.224076 | 7.3:+4420532 | None:intergenic |
| GGCAATGCTCGGTTTGTATT+TGG | 0.230061 | 7.3:+4420656 | None:intergenic |
| TCAAAGCTCTTCCATGTCTA+TGG | 0.251505 | 7.3:-4418789 | MS.gene072558:CDS |
| CAATGGTTTCAAATGGAAAT+AGG | 0.279755 | 7.3:-4420742 | MS.gene072558:CDS |
| GGAATCAAGGGCACATAAAA+TGG | 0.292716 | 7.3:-4421254 | MS.gene072558:CDS |
| TTGAGAAATATTATGTGTTT+TGG | 0.295276 | 7.3:+4420388 | None:intergenic |
| TTTGAAGAGTTGCCATTGTT+TGG | 0.325053 | 7.3:+4420935 | None:intergenic |
| AAAACTCTATTCCTCGTATA+TGG | 0.327299 | 7.3:+4421055 | None:intergenic |
| ATGTCAATGTTCAGCCTAAA+AGG | 0.330024 | 7.3:-4420454 | MS.gene072558:CDS |
| AATAACCTATTGTGAGTAAC+TGG | 0.338823 | 7.3:+4421169 | None:intergenic |
| TTCATCTTGTTCCATGGTAT+TGG | 0.348152 | 7.3:+4419905 | None:intergenic |
| ATTTCTTTAGCCTGTTTGAT+TGG | 0.349914 | 7.3:-4422205 | MS.gene072558:CDS |
| TCCAACAGATCAAAGAGATT+TGG | 0.354587 | 7.3:+4418608 | None:intergenic |
| TTAACAAGTAAAGGAAAATC+AGG | 0.359427 | 7.3:-4420809 | MS.gene072558:CDS |
| AAATCATTTCTTTCATGATC+AGG | 0.359480 | 7.3:+4420323 | None:intergenic |
| TACCGGAATCAAAGTTCTAT+AGG | 0.363901 | 7.3:-4421682 | MS.gene072558:CDS |
| TCTTGATTTGAAAGAGAGAT+TGG | 0.364775 | 7.3:-4420999 | MS.gene072558:CDS |
| TGAATTGATGTCACCCATCT+AGG | 0.368625 | 7.3:+4418446 | None:intergenic |
| TTGAAGAGTTGCCATTGTTT+GGG | 0.374946 | 7.3:+4420936 | None:intergenic |
| AATGACATGAGCACTGGATA+TGG | 0.378953 | 7.3:-4418335 | MS.gene072558:CDS |
| GATTTGGTGTTGACTCTCTT+GGG | 0.382883 | 7.3:-4420130 | MS.gene072558:CDS |
| GCCAAATCTCTTTGATCTGT+TGG | 0.383800 | 7.3:-4418609 | MS.gene072558:CDS |
| GTCAACACCAAATCTAGTTC+TGG | 0.386085 | 7.3:+4420139 | None:intergenic |
| GTTGCAAATCATGGCCTAGA+TGG | 0.388615 | 7.3:-4418460 | MS.gene072558:CDS |
| TTAAGTCGGAGAAGTCTTCT+TGG | 0.388727 | 7.3:-4421285 | MS.gene072558:CDS |
| TGGTTTGACTTAATCTCATT+CGG | 0.390079 | 7.3:+4420698 | None:intergenic |
| CATCAACTGCAGAAGTTTCA+AGG | 0.394024 | 7.3:-4421730 | MS.gene072558:intron |
| AGATTTGGTGTTGACTCTCT+TGG | 0.399113 | 7.3:-4420131 | MS.gene072558:CDS |
| ATTACATGAGCTGCATTCTT+CGG | 0.400753 | 7.3:+4421115 | None:intergenic |
| TAGAAACTTGGAAGATGTAA+TGG | 0.401841 | 7.3:-4418375 | MS.gene072558:CDS |
| AGAAAACCATTACTCTTGAT+TGG | 0.403562 | 7.3:+4421142 | None:intergenic |
| GTACCAGCACATTGCCATTA+CGG | 0.403636 | 7.3:+4420615 | None:intergenic |
| CTAGATCTCAAACCAGTAGA+AGG | 0.406206 | 7.3:+4419960 | None:intergenic |
| GAAGATGAAACTCGTGTTGT+CGG | 0.408487 | 7.3:+4420524 | None:intergenic |
| AATCTCGTAAGAAGCTCGTT+TGG | 0.415531 | 7.3:-4422175 | MS.gene072558:CDS |
| AGTAGCTAGACTAATGGGTT+TGG | 0.415757 | 7.3:-4421446 | MS.gene072558:CDS |
| TTCTGTCAGTGAAAGTTACT+TGG | 0.418753 | 7.3:-4419417 | MS.gene072558:CDS |
| GTTTCTGGCTCCTTGTGAGC+TGG | 0.419501 | 7.3:+4420678 | None:intergenic |
| CCATTCCAGTTACTCACAAT+AGG | 0.420132 | 7.3:-4421174 | MS.gene072558:CDS |
| ATCTAGCATGGAAGAATAAA+CGG | 0.422941 | 7.3:+4418880 | None:intergenic |
| TTTATGTGCCCTTGATTCCA+TGG | 0.428294 | 7.3:+4421258 | None:intergenic |
| TGATGCATTGAGTGTCTTGT+TGG | 0.428531 | 7.3:-4420048 | MS.gene072558:CDS |
| CTCGGGCACACTTCTCTTCA+AGG | 0.429593 | 7.3:+4420193 | None:intergenic |
| TCATCTTCAGAAAGTTCTAC+TGG | 0.430240 | 7.3:-4420509 | MS.gene072558:CDS |
| TAGATAAAGGTGGATGAGAA+TGG | 0.432322 | 7.3:-4421550 | MS.gene072558:CDS |
| ATGGAAACCAGAACTAGATT+TGG | 0.433236 | 7.3:-4420146 | MS.gene072558:CDS |
| GGAATGGGTTTAGCCGACTT+TGG | 0.433498 | 7.3:+4421190 | None:intergenic |
| TATTCTCATTTAACAAGTAA+AGG | 0.433553 | 7.3:-4420818 | MS.gene072558:CDS |
| ACCGGAATCAAAGTTCTATA+GGG | 0.434864 | 7.3:-4421681 | MS.gene072558:intron |
| GGGTTAGTAGCTAGACTAAT+GGG | 0.436466 | 7.3:-4421451 | MS.gene072558:CDS |
| GAAGAGGGGTCAGAGGTTGA+AGG | 0.439614 | 7.3:-4418281 | MS.gene072558:CDS |
| ATGATTAACATTACCAGGTA+AGG | 0.444021 | 7.3:+4422142 | None:intergenic |
| GCAAGACAAAGCATCCAGTA+TGG | 0.444703 | 7.3:-4419934 | MS.gene072558:CDS |
| AGAAGGCTCCTCTGAGATTA+CGG | 0.445668 | 7.3:+4419977 | None:intergenic |
| AATGAAAGTGGAAATGATCT+AGG | 0.445864 | 7.3:-4419479 | MS.gene072558:CDS |
| TCATGCTTCTCATTATAATG+AGG | 0.446452 | 7.3:-4421362 | MS.gene072558:CDS |
| ATTTAGAATTCCAATCAAAC+AGG | 0.448534 | 7.3:+4422195 | None:intergenic |
| TTTGAAATCTCTTGAGTGAC+TGG | 0.449586 | 7.3:+4421227 | None:intergenic |
| CAAAGGTACATCATCATTCA+AGG | 0.450037 | 7.3:-4420879 | MS.gene072558:CDS |
| TTGTTGGAAGTTGCAAATCA+TGG | 0.451707 | 7.3:-4418469 | MS.gene072558:CDS |
| ATCTCAGAGGAGCCTTCTAC+TGG | 0.456510 | 7.3:-4419972 | MS.gene072558:CDS |
| CTATTGTGAGTAACTGGAAT+GGG | 0.457459 | 7.3:+4421175 | None:intergenic |
| AACTCTTCAAATTGTAAGCC+TGG | 0.458250 | 7.3:-4420923 | MS.gene072558:CDS |
| GGTATTGGTGTTAACCATAC+TGG | 0.458605 | 7.3:+4419920 | None:intergenic |
| GGAAAATCTAGAGACCTTAC+CGG | 0.458686 | 7.3:-4421699 | MS.gene072558:CDS |
| GACAGTGAAGACAGTGCATA+TGG | 0.458972 | 7.3:-4419395 | MS.gene072558:intron |
| TTGTACAGACATCAGAAGTA+AGG | 0.461314 | 7.3:-4419526 | MS.gene072558:intron |
| GCGGCTGCTAAGATAATTGA+TGG | 0.467501 | 7.3:-4421088 | MS.gene072558:CDS |
| TCATCAGTTTGTAGTGATGA+GGG | 0.470024 | 7.3:-4421493 | MS.gene072558:CDS |
| CGGGTTAGTAGCTAGACTAA+TGG | 0.470161 | 7.3:-4421452 | MS.gene072558:CDS |
| TGCTGATTCATGTTAAGCAC+TGG | 0.476068 | 7.3:+4419825 | None:intergenic |
| TAAGTCGGAGAAGTCTTCTT+GGG | 0.478430 | 7.3:-4421284 | MS.gene072558:CDS |
| TTCCATCACTTGCTCGGCAG+AGG | 0.481154 | 7.3:+4420163 | None:intergenic |
| CAAAGCTCTTCCATGTCTAT+GGG | 0.483022 | 7.3:-4418788 | MS.gene072558:CDS |
| TTTGGATTCTTTGCCAACTT+CGG | 0.483220 | 7.3:-4421428 | MS.gene072558:CDS |
| TTTGTAGTGATGAGGGGTGT+GGG | 0.483558 | 7.3:-4421486 | MS.gene072558:CDS |
| GGTTGTCAGCATTCTGATGC+TGG | 0.486477 | 7.3:-4419458 | MS.gene072558:CDS |
| AGAGATACAATGGTTTCAAA+TGG | 0.487273 | 7.3:-4420749 | MS.gene072558:CDS |
| CTCGGCAGAGGATAGTGACT+CGG | 0.487665 | 7.3:+4420175 | None:intergenic |
| CATGCTTCTCATTATAATGA+GGG | 0.487956 | 7.3:-4421361 | MS.gene072558:CDS |
| TGATCAGGACTTCTTGCCTC+AGG | 0.489473 | 7.3:+4420338 | None:intergenic |
| TTTCAAATCAAGAATTCTCA+AGG | 0.489682 | 7.3:+4421009 | None:intergenic |
| TGAATCAGATTCGTTTATCT+GGG | 0.491141 | 7.3:+4418838 | None:intergenic |
| TGAGCACTGGATATGGGAAA+TGG | 0.491726 | 7.3:-4418328 | MS.gene072558:CDS |
| TGGAACAATCAAACCTTACC+TGG | 0.493911 | 7.3:-4422155 | MS.gene072558:intron |
| GAGAACCATCAGAGTACATC+AGG | 0.496191 | 7.3:-4418587 | MS.gene072558:CDS |
| GAACATTTCATCTTGTTCCA+TGG | 0.496613 | 7.3:+4419899 | None:intergenic |
| GTCGACTAGCTTTCTAGACA+TGG | 0.496834 | 7.3:+4420958 | None:intergenic |
| ACCCTATAGAACTTTGATTC+CGG | 0.497405 | 7.3:+4421680 | None:intergenic |
| CTTGGGATGCCATGGAATCA+AGG | 0.497669 | 7.3:-4421267 | MS.gene072558:CDS |
| CATGTCTATGGGGCAATATG+TGG | 0.498871 | 7.3:-4418777 | MS.gene072558:CDS |
| TCACTCTAAGCTTGAAAGGA+AGG | 0.500517 | 7.3:-4418543 | MS.gene072558:CDS |
| TTGTCTCCAATCAAGAGTAA+TGG | 0.505640 | 7.3:-4421148 | MS.gene072558:CDS |
| AACTGCAGAAGTTTCAAGGC+AGG | 0.506503 | 7.3:-4421726 | MS.gene072558:intron |
| CTATTCCTCGTATATGGCTG+AGG | 0.507488 | 7.3:+4421061 | None:intergenic |
| TGAGGGTGCTCTTCGTTCCA+TGG | 0.510083 | 7.3:-4421344 | MS.gene072558:CDS |
| ATAATGAGAAGCATGAAAGT+TGG | 0.511372 | 7.3:+4421369 | None:intergenic |
| AGCTCACCGACGTCCGAAGT+TGG | 0.511646 | 7.3:+4421415 | None:intergenic |
| GCCTAAAAGGTCAAGCTCTA+GGG | 0.513483 | 7.3:-4420441 | MS.gene072558:CDS |
| TCTGGTTTCCATCACTTGCT+CGG | 0.514344 | 7.3:+4420157 | None:intergenic |
| AGCCTAAAAGGTCAAGCTCT+AGG | 0.514877 | 7.3:-4420442 | MS.gene072558:CDS |
| GAATATGTACAGAAAATACT+TGG | 0.515552 | 7.3:-4418689 | MS.gene072558:CDS |
| GAAGAATGCAGCTCATGTAA+TGG | 0.515627 | 7.3:-4421113 | MS.gene072558:CDS |
| TTCATCAGTTTGTAGTGATG+AGG | 0.517539 | 7.3:-4421494 | MS.gene072558:CDS |
| GACATTGAAGCATTTGAAGA+GGG | 0.520513 | 7.3:-4418296 | MS.gene072558:CDS |
| ATCCTCTGCCGAGCAAGTGA+TGG | 0.524003 | 7.3:-4420165 | MS.gene072558:CDS |
| AAGAGGGGTCAGAGGTTGAA+GGG | 0.526933 | 7.3:-4418280 | MS.gene072558:CDS |
| TCGGACGTCGGTGAGCTCTC+CGG | 0.532203 | 7.3:-4421409 | MS.gene072558:CDS |
| GAAGACTTCTCCGACTTAAG+TGG | 0.533144 | 7.3:+4421289 | None:intergenic |
| GGGTGTGGGAGTAAAGCTCC+CGG | 0.536026 | 7.3:-4421472 | MS.gene072558:CDS |
| ATGACATGAGCACTGGATAT+GGG | 0.538932 | 7.3:-4418334 | MS.gene072558:CDS |
| AGATACTTCTTCATCTAGCA+TGG | 0.540273 | 7.3:+4418868 | None:intergenic |
| GTCTGCAATGACATGAGCAC+TGG | 0.540768 | 7.3:-4418341 | MS.gene072558:CDS |
| ATAGAACTTTGATTCCGGTA+AGG | 0.546952 | 7.3:+4421685 | None:intergenic |
| AGTCCGAGTAATATAGTAAG+TGG | 0.550827 | 7.3:-4421523 | MS.gene072558:CDS |
| GTTTGTAGTGATGAGGGGTG+TGG | 0.551029 | 7.3:-4421487 | MS.gene072558:CDS |
| ATGGGTTTAGCCGACTTTGG+AGG | 0.553218 | 7.3:+4421193 | None:intergenic |
| GATGGGTGACATCAATTCAA+AGG | 0.554306 | 7.3:-4418442 | MS.gene072558:CDS |
| CATCAGTTTGTAGTGATGAG+GGG | 0.554353 | 7.3:-4421492 | MS.gene072558:CDS |
| AAAACGTGTGCAAACCGTAA+TGG | 0.554411 | 7.3:-4420629 | MS.gene072558:CDS |
| CATTAGTCTAGCTACTAACC+CGG | 0.555448 | 7.3:+4421453 | None:intergenic |
| AAGTTCTACTGGAGTCAGAA+AGG | 0.557721 | 7.3:-4420498 | MS.gene072558:CDS |
| AGTCAGAAAGGCAACAAACA+AGG | 0.557842 | 7.3:-4420486 | MS.gene072558:CDS |
| CCTATTGTGAGTAACTGGAA+TGG | 0.558950 | 7.3:+4421174 | None:intergenic |
| TTGCAAATCATGGCCTAGAT+GGG | 0.560806 | 7.3:-4418459 | MS.gene072558:CDS |
| AAGATCACTCTAAGCTTGAA+AGG | 0.562316 | 7.3:-4418547 | MS.gene072558:CDS |
| TCACTATCTATCATATGTGT+CGG | 0.564183 | 7.3:+4420068 | None:intergenic |
| ATGGCAGAAGAATTTGTCAT+GGG | 0.564588 | 7.3:-4418653 | MS.gene072558:CDS |
| TGTAGCAGCAACAATGAAAG+TGG | 0.564981 | 7.3:-4419491 | MS.gene072558:CDS |
| AGACTGTTTGATTGATGAGA+TGG | 0.565226 | 7.3:-4418249 | MS.gene072558:CDS |
| GAAGTCTTCTTGGGATGCCA+TGG | 0.565368 | 7.3:-4421275 | MS.gene072558:CDS |
| CACATATTGCCCCATAGACA+TGG | 0.565694 | 7.3:+4418778 | None:intergenic |
| CGTTCAAAGCAGAGATACAA+TGG | 0.565930 | 7.3:-4420759 | MS.gene072558:CDS |
| TTGGGATGCCATGGAATCAA+GGG | 0.569801 | 7.3:-4421266 | MS.gene072558:CDS |
| TGAAATGTTGCCTCCAAAGT+CGG | 0.572372 | 7.3:-4421203 | MS.gene072558:CDS |
| AGAAGTTTCAAGGCAGGGAA+AGG | 0.573539 | 7.3:-4421720 | MS.gene072558:CDS |
| CAAAATAGTATGACTTCCAA+AGG | 0.573557 | 7.3:-4420578 | MS.gene072558:CDS |
| TGCAGCTCATGTAATGGAGG+CGG | 0.575246 | 7.3:-4421107 | MS.gene072558:CDS |
| TCGGGCACACTTCTCTTCAA+GGG | 0.577563 | 7.3:+4420194 | None:intergenic |
| GGAGCTGAATAGTGAAGCAC+CGG | 0.578587 | 7.3:+4421390 | None:intergenic |
| TATGGCAGAAGAATTTGTCA+TGG | 0.581714 | 7.3:-4418654 | MS.gene072558:CDS |
| TTCAAATCAAGAATTCTCAA+GGG | 0.586162 | 7.3:+4421010 | None:intergenic |
| TGACATTGAAGCATTTGAAG+AGG | 0.587741 | 7.3:-4418297 | MS.gene072558:CDS |
| TTAAGTCAAACCAGCTCACA+AGG | 0.593311 | 7.3:-4420688 | MS.gene072558:CDS |
| CTTAAACACACCACTTAAGT+CGG | 0.594149 | 7.3:-4421299 | MS.gene072558:CDS |
| CGCACGACGATAGTCATCCA+TGG | 0.595188 | 7.3:+4421327 | None:intergenic |
| TCGCCACTTACTATATTACT+CGG | 0.596350 | 7.3:+4421520 | None:intergenic |
| ACATTGAAGCATTTGAAGAG+GGG | 0.596973 | 7.3:-4418295 | MS.gene072558:CDS |
| AAATTAGAACTCCTCTCACC+AGG | 0.597036 | 7.3:+4420905 | None:intergenic |
| CACTTGAAAATGAAGTGACA+TGG | 0.597864 | 7.3:-4418817 | MS.gene072558:CDS |
| GTGGCTGTCACACAAATATG+TGG | 0.598071 | 7.3:-4418758 | MS.gene072558:CDS |
| AATATGTGGAACACCAAACA+TGG | 0.598654 | 7.3:-4418744 | MS.gene072558:CDS |
| TAACATGAATCAGCAACTGC+AGG | 0.601446 | 7.3:-4419817 | MS.gene072558:intron |
| TATTCCTCGTATATGGCTGA+GGG | 0.603780 | 7.3:+4421062 | None:intergenic |
| TGTACAGACATCAGAAGTAA+GGG | 0.605254 | 7.3:-4419525 | MS.gene072558:intron |
| AGCATTTGAAGAGGGGTCAG+AGG | 0.607202 | 7.3:-4418288 | MS.gene072558:CDS |
| TCGGCAGAGGATAGTGACTC+GGG | 0.608484 | 7.3:+4420176 | None:intergenic |
| GGTGACATCAATTCAAAGGA+AGG | 0.612539 | 7.3:-4418438 | MS.gene072558:CDS |
| TCTTTGCCAACTTCGGACGT+CGG | 0.617948 | 7.3:-4421421 | MS.gene072558:CDS |
| ACTGCAGAAGTTTCAAGGCA+GGG | 0.617971 | 7.3:-4421725 | MS.gene072558:intron |
| ACATCAGGTACATCATATTG+TGG | 0.620205 | 7.3:-4418572 | MS.gene072558:CDS |
| AGAGGGGTCAGAGGTTGAAG+GGG | 0.626738 | 7.3:-4418279 | MS.gene072558:CDS |
| AAACCGTAATGGCAATGTGC+TGG | 0.628053 | 7.3:-4420618 | MS.gene072558:CDS |
| CTATCGCTGTTGTTCAAGTG+AGG | 0.630068 | 7.3:-4419850 | MS.gene072558:CDS |
| TCGACTAGCTTTCTAGACAT+GGG | 0.631265 | 7.3:+4420959 | None:intergenic |
| AAACTTGGAAGATGTAATGG+TGG | 0.636219 | 7.3:-4418372 | MS.gene072558:CDS |
| AAAGGTACATCATCATTCAA+GGG | 0.636259 | 7.3:-4420878 | MS.gene072558:CDS |
| TTTGGCAGATGAGTTATACA+GGG | 0.636557 | 7.3:-4418411 | MS.gene072558:CDS |
| ATGTACCTGATGTACTCTGA+TGG | 0.636993 | 7.3:+4418582 | None:intergenic |
| ACATGAGCTGCATTCTTCGG+CGG | 0.637093 | 7.3:+4421118 | None:intergenic |
| AAGCTAGTCGACCCAAACAA+TGG | 0.638219 | 7.3:-4420947 | MS.gene072558:CDS |
| AAGTAACTTTCACTGACAGA+AGG | 0.642170 | 7.3:+4419419 | None:intergenic |
| GAATGCAGCTCATGTAATGG+AGG | 0.646804 | 7.3:-4421110 | MS.gene072558:CDS |
| GTCAGAAAGGCAACAAACAA+GGG | 0.647142 | 7.3:-4420485 | MS.gene072558:CDS |
| TAGGGCAATCAATAACCGAA+AGG | 0.649794 | 7.3:-4420423 | MS.gene072558:CDS |
| TTTCAAAATATCAAGCGACA+TGG | 0.652102 | 7.3:-4418717 | MS.gene072558:CDS |
| TATGGTTAACACCAATACCA+TGG | 0.655461 | 7.3:-4419916 | MS.gene072558:CDS |
| GGTGTGGGAGTAAAGCTCCC+GGG | 0.662258 | 7.3:-4421471 | MS.gene072558:CDS |
| TGACAGCAGAGGTGTTCCTG+AGG | 0.669852 | 7.3:-4420354 | MS.gene072558:CDS |
| CAAATTGTAAGCCTGGTGAG+AGG | 0.672573 | 7.3:-4420916 | MS.gene072558:CDS |
| ATTAGTCTAGCTACTAACCC+GGG | 0.683901 | 7.3:+4421454 | None:intergenic |
| AAAGCTCTTCCATGTCTATG+GGG | 0.687339 | 7.3:-4418787 | MS.gene072558:CDS |
| CATGGATGACTATCGTCGTG+CGG | 0.707839 | 7.3:-4421326 | MS.gene072558:CDS |
| GAAGCCCTCAGCCATATACG+AGG | 0.718262 | 7.3:-4421066 | MS.gene072558:CDS |
| TCAGTGTACCGTAATCTCAG+AGG | 0.719931 | 7.3:-4419985 | MS.gene072558:CDS |
| TCTGAGATTACGGTACACTG+AGG | 0.805122 | 7.3:+4419987 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTGAAAAATGTATAAA+AGG | + | chr7.3:4421196-4421215 | None:intergenic | 10.0% |
| !!! | CAATTTTATATGTATTATAA+GGG | + | chr7.3:4421520-4421539 | None:intergenic | 10.0% |
| !! | AATAAGCTAAAAACATATTA+TGG | + | chr7.3:4418505-4418524 | None:intergenic | 15.0% |
| !! | ATAAGCTAAAAACATATTAT+GGG | + | chr7.3:4418504-4418523 | None:intergenic | 15.0% |
| !!! | ATTGAAATTGTTTTAGATAA+AGG | - | chr7.3:4418893-4418912 | MS.gene072558:intron | 15.0% |
| !!! | GCAATTTTATATGTATTATA+AGG | + | chr7.3:4421521-4421540 | None:intergenic | 15.0% |
| !!! | GTAAAATAATTTTACACTAA+AGG | + | chr7.3:4421293-4421312 | None:intergenic | 15.0% |
| !!! | TTTGATTTATTTTTTTGGTT+TGG | - | chr7.3:4418868-4418887 | MS.gene072558:CDS | 15.0% |
| !! | AAAAATGTATAAAAGGCTAA+AGG | + | chr7.3:4421189-4421208 | None:intergenic | 20.0% |
| !! | AACAATTATTCTCAGTAAAT+TGG | + | chr7.3:4420800-4420819 | None:intergenic | 20.0% |
| !! | CATATTTGTTTATCAATGTT+TGG | - | chr7.3:4421449-4421468 | MS.gene072558:CDS | 20.0% |
| !! | TATTCTCATTTAACAAGTAA+AGG | - | chr7.3:4419638-4419657 | MS.gene072558:intron | 20.0% |
| !!! | AAATATTATGTGTTTTGGAT+GGG | + | chr7.3:4420066-4420085 | None:intergenic | 20.0% |
| !!! | AGTTGTAAAATTGCATTTTA+TGG | + | chr7.3:4420170-4420189 | None:intergenic | 20.0% |
| !!! | TTGAGAAATATTATGTGTTT+TGG | + | chr7.3:4420071-4420090 | None:intergenic | 20.0% |
| ! | AAATCATTTCTTTCATGATC+AGG | + | chr7.3:4420136-4420155 | None:intergenic | 25.0% |
| ! | AATCACATCTCATATATGTT+AGG | - | chr7.3:4421324-4421343 | MS.gene072558:CDS | 25.0% |
| ! | ATACTCAGTTTCATATGTAA+TGG | - | chr7.3:4420687-4420706 | MS.gene072558:CDS | 25.0% |
| ! | ATAGCTTACACGAAAATATT+TGG | - | chr7.3:4418562-4418581 | MS.gene072558:CDS | 25.0% |
| ! | GAATAATATATGACCATGTT+TGG | + | chr7.3:4418661-4418680 | None:intergenic | 25.0% |
| ! | GAATATGTACAGAAAATACT+TGG | - | chr7.3:4421767-4421786 | MS.gene072558:intron | 25.0% |
| ! | GTAAGAAGTAAAAAGTAAAC+AGG | + | chr7.3:4421146-4421165 | None:intergenic | 25.0% |
| ! | TATGTAAGTTTATCCAAACA+TGG | - | chr7.3:4418645-4418664 | MS.gene072558:CDS | 25.0% |
| ! | TTAACAAGTAAAGGAAAATC+AGG | - | chr7.3:4419647-4419666 | MS.gene072558:intron | 25.0% |
| ! | TTCAAATCAAGAATTCTCAA+GGG | + | chr7.3:4419449-4419468 | None:intergenic | 25.0% |
| ! | TTTCAAATCAAGAATTCTCA+AGG | + | chr7.3:4419450-4419469 | None:intergenic | 25.0% |
| !! | AAATGCAATTTTACAACTGA+TGG | - | chr7.3:4420172-4420191 | MS.gene072558:CDS | 25.0% |
| !! | ATTTAGAATTCCAATCAAAC+AGG | + | chr7.3:4418264-4418283 | None:intergenic | 25.0% |
| !! | GTAACAGAAACATTTAGAAT+AGG | + | chr7.3:4418707-4418726 | None:intergenic | 25.0% |
| !! | TGAGTCTAATTTTCCAAATT+AGG | - | chr7.3:4420844-4420863 | MS.gene072558:CDS | 25.0% |
| !!! | AATATTATGTGTTTTGGATG+GGG | + | chr7.3:4420065-4420084 | None:intergenic | 25.0% |
| !!! | ATAGCAATAATTTTTTGGGA+TGG | + | chr7.3:4420366-4420385 | None:intergenic | 25.0% |
| !!! | ATATTGTTTTGACTATGTGT+TGG | + | chr7.3:4420770-4420789 | None:intergenic | 25.0% |
| !!! | ATTTTGAAATCTACCATGTT+TGG | + | chr7.3:4421728-4421747 | None:intergenic | 25.0% |
| !!! | CTTTGAGATCAAAACAAATA+AGG | + | chr7.3:4421113-4421132 | None:intergenic | 25.0% |
| !!! | GAAATATTATGTGTTTTGGA+TGG | + | chr7.3:4420067-4420086 | None:intergenic | 25.0% |
| !!! | GAAATTGTTTTAGATAAAGG+TGG | - | chr7.3:4418896-4418915 | MS.gene072558:intron | 25.0% |
| !!! | GGAGATAGCAATAATTTTTT+GGG | + | chr7.3:4420370-4420389 | None:intergenic | 25.0% |
| !!! | TTTTGAAGTTGATTTACCTT+TGG | + | chr7.3:4419897-4419916 | None:intergenic | 25.0% |
| AAAACTCTATTCCTCGTATA+TGG | + | chr7.3:4419404-4419423 | None:intergenic | 30.0% | |
| AATAACCTATTGTGAGTAAC+TGG | + | chr7.3:4419290-4419309 | None:intergenic | 30.0% | |
| AATGAAAGTGGAAATGATCT+AGG | - | chr7.3:4420977-4420996 | MS.gene072558:CDS | 30.0% | |
| AGAAAACCATTACTCTTGAT+TGG | + | chr7.3:4419317-4419336 | None:intergenic | 30.0% | |
| AGAGATACAATGGTTTCAAA+TGG | - | chr7.3:4419707-4419726 | MS.gene072558:intron | 30.0% | |
| AGATCATCATGTGATTTGAT+TGG | - | chr7.3:4421365-4421384 | MS.gene072558:CDS | 30.0% | |
| ATCTAGCATGGAAGAATAAA+CGG | + | chr7.3:4421579-4421598 | None:intergenic | 30.0% | |
| ATGATTAACATTACCAGGTA+AGG | + | chr7.3:4418317-4418336 | None:intergenic | 30.0% | |
| ATGGAGAAAAAACGTTCAAA+AGG | - | chr7.3:4418226-4418245 | MS.gene072558:CDS | 30.0% | |
| ATGTTTATCTTTCCCTTCAA+TGG | - | chr7.3:4421086-4421105 | MS.gene072558:CDS | 30.0% | |
| ATTTCTTTAGCCTGTTTGAT+TGG | - | chr7.3:4418251-4418270 | MS.gene072558:CDS | 30.0% | |
| CAAAATAGTATGACTTCCAA+AGG | - | chr7.3:4419878-4419897 | MS.gene072558:CDS | 30.0% | |
| CAATGGTTTCAAATGGAAAT+AGG | - | chr7.3:4419714-4419733 | MS.gene072558:intron | 30.0% | |
| CATGCTTCTCATTATAATGA+GGG | - | chr7.3:4419095-4419114 | MS.gene072558:intron | 30.0% | |
| GATCATCATGTGATTTGATT+GGG | - | chr7.3:4421366-4421385 | MS.gene072558:CDS | 30.0% | |
| GGAAAATTAGACTCAGTAAA+TGG | + | chr7.3:4420839-4420858 | None:intergenic | 30.0% | |
| TAGAAACTTGGAAGATGTAA+TGG | - | chr7.3:4422081-4422100 | MS.gene072558:intron | 30.0% | |
| TCAAATAAGTCAAACCAAAC+AGG | + | chr7.3:4418414-4418433 | None:intergenic | 30.0% | |
| TCACTATCTATCATATGTGT+CGG | + | chr7.3:4420391-4420410 | None:intergenic | 30.0% | |
| TCATGCTTCTCATTATAATG+AGG | - | chr7.3:4419094-4419113 | MS.gene072558:intron | 30.0% | |
| TGAATCAGATTCGTTTATCT+GGG | + | chr7.3:4421621-4421640 | None:intergenic | 30.0% | |
| TGTTTATCTTTCCCTTCAAT+GGG | - | chr7.3:4421087-4421106 | MS.gene072558:CDS | 30.0% | |
| TTTCAAAATATCAAGCGACA+TGG | - | chr7.3:4421739-4421758 | MS.gene072558:intron | 30.0% | |
| ! | AAAGGTACATCATCATTCAA+GGG | - | chr7.3:4419578-4419597 | MS.gene072558:intron | 30.0% |
| ! | AATTCAAAGGAAGGACTTTT+TGG | - | chr7.3:4422027-4422046 | MS.gene072558:intron | 30.0% |
| ! | AGATGTGAAAAAGCTTTTGT+TGG | - | chr7.3:4421971-4421990 | MS.gene072558:intron | 30.0% |
| ! | ATAATGAGAAGCATGAAAGT+TGG | + | chr7.3:4419090-4419109 | None:intergenic | 30.0% |
| ! | TATTATAAGGGCATATGCTA+CGG | + | chr7.3:4421508-4421527 | None:intergenic | 30.0% |
| ! | TCTTGATTTGAAAGAGAGAT+TGG | - | chr7.3:4419457-4419476 | MS.gene072558:CDS | 30.0% |
| ! | TGGTTTGACTTAATCTCATT+CGG | + | chr7.3:4419761-4419780 | None:intergenic | 30.0% |
| !! | AGGAGTTCTAATTTTGACAA+AGG | - | chr7.3:4419560-4419579 | MS.gene072558:intron | 30.0% |
| !! | ATATTATGTGTTTTGGATGG+GGG | + | chr7.3:4420064-4420083 | None:intergenic | 30.0% |
| !! | TGTTTGGTTTGACTTATTTG+AGG | - | chr7.3:4418413-4418432 | MS.gene072558:CDS | 30.0% |
| !!! | CGGAGATAGCAATAATTTTT+TGG | + | chr7.3:4420371-4420390 | None:intergenic | 30.0% |
| !!! | GATGATGAGTTTTAGAAACT+TGG | - | chr7.3:4422069-4422088 | MS.gene072558:intron | 30.0% |
| AAAAAGCAGACAGCAAAAAG+TGG | + | chr7.3:4418815-4418834 | None:intergenic | 35.0% | |
| AAAAGCAGACAGCAAAAAGT+GGG | + | chr7.3:4418814-4418833 | None:intergenic | 35.0% | |
| AAACAAATAAGGCCCATTGA+AGG | + | chr7.3:4421102-4421121 | None:intergenic | 35.0% | |
| AAACTGCAGACAACCTAATT+TGG | + | chr7.3:4420860-4420879 | None:intergenic | 35.0% | |
| AAACTTGGAAGATGTAATGG+TGG | - | chr7.3:4422084-4422103 | MS.gene072558:intron | 35.0% | |
| AACAAATAAGGCCCATTGAA+GGG | + | chr7.3:4421101-4421120 | None:intergenic | 35.0% | |
| AACTCTTCAAATTGTAAGCC+TGG | - | chr7.3:4419533-4419552 | MS.gene072558:intron | 35.0% | |
| AAGATCACTCTAAGCTTGAA+AGG | - | chr7.3:4421909-4421928 | MS.gene072558:intron | 35.0% | |
| AAGCTATCTTGTAGAGCTTA+TGG | + | chr7.3:4418529-4418548 | None:intergenic | 35.0% | |
| AAGTAACTTTCACTGACAGA+AGG | + | chr7.3:4421040-4421059 | None:intergenic | 35.0% | |
| AATATGTGGAACACCAAACA+TGG | - | chr7.3:4421712-4421731 | MS.gene072558:CDS | 35.0% | |
| ACATCAGGTACATCATATTG+TGG | - | chr7.3:4421884-4421903 | MS.gene072558:intron | 35.0% | |
| ACCCTATAGAACTTTGATTC+CGG | + | chr7.3:4418779-4418798 | None:intergenic | 35.0% | |
| ACCGGAATCAAAGTTCTATA+GGG | - | chr7.3:4418775-4418794 | MS.gene072558:CDS | 35.0% | |
| AGATACTTCTTCATCTAGCA+TGG | + | chr7.3:4421591-4421610 | None:intergenic | 35.0% | |
| AGTCCGAGTAATATAGTAAG+TGG | - | chr7.3:4418933-4418952 | MS.gene072558:intron | 35.0% | |
| ATAGAACTTTGATTCCGGTA+AGG | + | chr7.3:4418774-4418793 | None:intergenic | 35.0% | |
| ATGGAAACCAGAACTAGATT+TGG | - | chr7.3:4420310-4420329 | MS.gene072558:CDS | 35.0% | |
| ATGGCAGAAGAATTTGTCAT+GGG | - | chr7.3:4421803-4421822 | MS.gene072558:intron | 35.0% | |
| ATGTCAATGTTCAGCCTAAA+AGG | - | chr7.3:4420002-4420021 | MS.gene072558:CDS | 35.0% | |
| ATTACATGAGCTGCATTCTT+CGG | + | chr7.3:4419344-4419363 | None:intergenic | 35.0% | |
| CACTTGAAAATGAAGTGACA+TGG | - | chr7.3:4421639-4421658 | MS.gene072558:intron | 35.0% | |
| CATGATGATCTCACTTTGTT+AGG | + | chr7.3:4421356-4421375 | None:intergenic | 35.0% | |
| CGGAAAAGCAACAAATTTCA+TGG | + | chr7.3:4421488-4421507 | None:intergenic | 35.0% | |
| CTAACAAGTTTGTAACACAC+AGG | + | chr7.3:4421253-4421272 | None:intergenic | 35.0% | |
| CTATTGTGAGTAACTGGAAT+GGG | + | chr7.3:4419284-4419303 | None:intergenic | 35.0% | |
| CTTAAACACACCACTTAAGT+CGG | - | chr7.3:4419157-4419176 | MS.gene072558:intron | 35.0% | |
| GAAAACAGGAAGAAACTGAT+CGG | + | chr7.3:4421548-4421567 | None:intergenic | 35.0% | |
| GAACATTTCATCTTGTTCCA+TGG | + | chr7.3:4420560-4420579 | None:intergenic | 35.0% | |
| GTGAATCAGATTCGTTTATC+TGG | + | chr7.3:4421622-4421641 | None:intergenic | 35.0% | |
| TACCGGAATCAAAGTTCTAT+AGG | - | chr7.3:4418774-4418793 | MS.gene072558:CDS | 35.0% | |
| TAGATAAAGGTGGATGAGAA+TGG | - | chr7.3:4418906-4418925 | MS.gene072558:intron | 35.0% | |
| TATGGCAGAAGAATTTGTCA+TGG | - | chr7.3:4421802-4421821 | MS.gene072558:intron | 35.0% | |
| TATGGTTAACACCAATACCA+TGG | - | chr7.3:4420540-4420559 | MS.gene072558:CDS | 35.0% | |
| TCATCAGTTTGTAGTGATGA+GGG | - | chr7.3:4418963-4418982 | MS.gene072558:intron | 35.0% | |
| TCATCTTCAGAAAGTTCTAC+TGG | - | chr7.3:4419947-4419966 | MS.gene072558:CDS | 35.0% | |
| TCCAACAGATCAAAGAGATT+TGG | + | chr7.3:4421851-4421870 | None:intergenic | 35.0% | |
| TCGCCACTTACTATATTACT+CGG | + | chr7.3:4418939-4418958 | None:intergenic | 35.0% | |
| TGTACAGACATCAGAAGTAA+GGG | - | chr7.3:4420931-4420950 | MS.gene072558:CDS | 35.0% | |
| TTCATCAGTTTGTAGTGATG+AGG | - | chr7.3:4418962-4418981 | MS.gene072558:intron | 35.0% | |
| TTCATCTTGTTCCATGGTAT+TGG | + | chr7.3:4420554-4420573 | None:intergenic | 35.0% | |
| TTCTGTCAGTGAAAGTTACT+TGG | - | chr7.3:4421039-4421058 | MS.gene072558:CDS | 35.0% | |
| TTGAAGAGTTGCCATTGTTT+GGG | + | chr7.3:4419523-4419542 | None:intergenic | 35.0% | |
| TTGTACAGACATCAGAAGTA+AGG | - | chr7.3:4420930-4420949 | MS.gene072558:CDS | 35.0% | |
| TTGTCTCCAATCAAGAGTAA+TGG | - | chr7.3:4419308-4419327 | MS.gene072558:intron | 35.0% | |
| TTGTTGGAAGTTGCAAATCA+TGG | - | chr7.3:4421987-4422006 | MS.gene072558:intron | 35.0% | |
| TTTGAAGAGTTGCCATTGTT+TGG | + | chr7.3:4419524-4419543 | None:intergenic | 35.0% | |
| TTTGGATTCTTTGCCAACTT+CGG | - | chr7.3:4419028-4419047 | MS.gene072558:intron | 35.0% | |
| TTTGGCAGATGAGTTATACA+GGG | - | chr7.3:4422045-4422064 | MS.gene072558:intron | 35.0% | |
| ! | AAGAAAAAGTATGACAGCAG+AGG | - | chr7.3:4420091-4420110 | MS.gene072558:CDS | 35.0% |
| ! | ACATTGAAGCATTTGAAGAG+GGG | - | chr7.3:4422161-4422180 | MS.gene072558:CDS | 35.0% |
| ! | ATCAGTTTCTTCCTGTTTTC+AGG | - | chr7.3:4421548-4421567 | MS.gene072558:CDS | 35.0% |
| ! | CAAAGGTACATCATCATTCA+AGG | - | chr7.3:4419577-4419596 | MS.gene072558:intron | 35.0% |
| ! | GACATTGAAGCATTTGAAGA+GGG | - | chr7.3:4422160-4422179 | MS.gene072558:CDS | 35.0% |
| ! | TGACATTGAAGCATTTGAAG+AGG | - | chr7.3:4422159-4422178 | MS.gene072558:CDS | 35.0% |
| ! | TTTGAAATCTCTTGAGTGAC+TGG | + | chr7.3:4419232-4419251 | None:intergenic | 35.0% |
| ! | TTTTGGCAGATGAGTTATAC+AGG | - | chr7.3:4422044-4422063 | MS.gene072558:intron | 35.0% |
| !! | AAACCAAACAGGTTCTAGAT+AGG | + | chr7.3:4418403-4418422 | None:intergenic | 35.0% |
| !! | ACGAGGAATAGAGTTTTATC+AGG | - | chr7.3:4419407-4419426 | MS.gene072558:CDS | 35.0% |
| !! | AGGAATAGAGTTTTATCAGG+CGG | - | chr7.3:4419410-4419429 | MS.gene072558:CDS | 35.0% |
| !! | CTTTTTCACATCTCAACTCT+AGG | + | chr7.3:4421964-4421983 | None:intergenic | 35.0% |
| !! | TCTGCTTTGAACGTTGTTTT+TGG | + | chr7.3:4419690-4419709 | None:intergenic | 35.0% |
| !! | TTTTGACTATGTGTTGGACT+TGG | + | chr7.3:4420764-4420783 | None:intergenic | 35.0% |
| !!! | TTGTTTTTGGCTTGCATTGT+AGG | + | chr7.3:4419677-4419696 | None:intergenic | 35.0% |
| AAAACGTGTGCAAACCGTAA+TGG | - | chr7.3:4419827-4419846 | MS.gene072558:CDS | 40.0% | |
| AAAGCAGACAGCAAAAAGTG+GGG | + | chr7.3:4418813-4418832 | None:intergenic | 40.0% | |
| AAAGCTCTTCCATGTCTATG+GGG | - | chr7.3:4421669-4421688 | MS.gene072558:intron | 40.0% | |
| AAATTAGAACTCCTCTCACC+AGG | + | chr7.3:4419554-4419573 | None:intergenic | 40.0% | |
| AACACACAGGTGCAACATAA+AGG | + | chr7.3:4421240-4421259 | None:intergenic | 40.0% | |
| AAGTTCTACTGGAGTCAGAA+AGG | - | chr7.3:4419958-4419977 | MS.gene072558:CDS | 40.0% | |
| AATCTCGTAAGAAGCTCGTT+TGG | - | chr7.3:4418281-4418300 | MS.gene072558:CDS | 40.0% | |
| ACTTGGCAACACAGAGTTTA+TGG | - | chr7.3:4421784-4421803 | MS.gene072558:intron | 40.0% | |
| AGTCAGAAAGGCAACAAACA+AGG | - | chr7.3:4419970-4419989 | MS.gene072558:CDS | 40.0% | |
| ATGTACCTGATGTACTCTGA+TGG | + | chr7.3:4421877-4421896 | None:intergenic | 40.0% | |
| CAAAGCTCTTCCATGTCTAT+GGG | - | chr7.3:4421668-4421687 | MS.gene072558:intron | 40.0% | |
| CATCAACTGCAGAAGTTTCA+AGG | - | chr7.3:4418726-4418745 | MS.gene072558:CDS | 40.0% | |
| CATCAGTTTGTAGTGATGAG+GGG | - | chr7.3:4418964-4418983 | MS.gene072558:intron | 40.0% | |
| CCATTCCAGTTACTCACAAT+AGG | - | chr7.3:4419282-4419301 | MS.gene072558:intron | 40.0% | |
| CCTATTGTGAGTAACTGGAA+TGG | + | chr7.3:4419285-4419304 | None:intergenic | 40.0% | |
| CGTTCAAAGCAGAGATACAA+TGG | - | chr7.3:4419697-4419716 | MS.gene072558:intron | 40.0% | |
| CTAGATCTCAAACCAGTAGA+AGG | + | chr7.3:4420499-4420518 | None:intergenic | 40.0% | |
| GAAGAATGCAGCTCATGTAA+TGG | - | chr7.3:4419343-4419362 | MS.gene072558:intron | 40.0% | |
| GAAGATGAAACTCGTGTTGT+CGG | + | chr7.3:4419935-4419954 | None:intergenic | 40.0% | |
| GATGGGTGACATCAATTCAA+AGG | - | chr7.3:4422014-4422033 | MS.gene072558:intron | 40.0% | |
| GCCAAATCTCTTTGATCTGT+TGG | - | chr7.3:4421847-4421866 | MS.gene072558:intron | 40.0% | |
| GGAAAATCTAGAGACCTTAC+CGG | - | chr7.3:4418757-4418776 | MS.gene072558:CDS | 40.0% | |
| GGTGACATCAATTCAAAGGA+AGG | - | chr7.3:4422018-4422037 | MS.gene072558:intron | 40.0% | |
| GTCAGAAAGGCAACAAACAA+GGG | - | chr7.3:4419971-4419990 | MS.gene072558:CDS | 40.0% | |
| GTGGCATGATTAACATTACC+AGG | + | chr7.3:4418322-4418341 | None:intergenic | 40.0% | |
| TAACATGAATCAGCAACTGC+AGG | - | chr7.3:4420639-4420658 | MS.gene072558:CDS | 40.0% | |
| TAAGTCGGAGAAGTCTTCTT+GGG | - | chr7.3:4419172-4419191 | MS.gene072558:intron | 40.0% | |
| TAGGGCAATCAATAACCGAA+AGG | - | chr7.3:4420033-4420052 | MS.gene072558:CDS | 40.0% | |
| TATTCCTCGTATATGGCTGA+GGG | + | chr7.3:4419397-4419416 | None:intergenic | 40.0% | |
| TCAAAGCTCTTCCATGTCTA+TGG | - | chr7.3:4421667-4421686 | MS.gene072558:intron | 40.0% | |
| TCACTCTAAGCTTGAAAGGA+AGG | - | chr7.3:4421913-4421932 | MS.gene072558:intron | 40.0% | |
| TGAAATGTTGCCTCCAAAGT+CGG | - | chr7.3:4419253-4419272 | MS.gene072558:intron | 40.0% | |
| TGAATTGATGTCACCCATCT+AGG | + | chr7.3:4422013-4422032 | None:intergenic | 40.0% | |
| TGATGCATTGAGTGTCTTGT+TGG | - | chr7.3:4420408-4420427 | MS.gene072558:CDS | 40.0% | |
| TGGAACAATCAAACCTTACC+TGG | - | chr7.3:4418301-4418320 | MS.gene072558:CDS | 40.0% | |
| TGTAGCAGCAACAATGAAAG+TGG | - | chr7.3:4420965-4420984 | MS.gene072558:CDS | 40.0% | |
| TTAAGTCAAACCAGCTCACA+AGG | - | chr7.3:4419768-4419787 | MS.gene072558:intron | 40.0% | |
| TTAAGTCGGAGAAGTCTTCT+TGG | - | chr7.3:4419171-4419190 | MS.gene072558:intron | 40.0% | |
| TTGCAAATCATGGCCTAGAT+GGG | - | chr7.3:4421997-4422016 | MS.gene072558:intron | 40.0% | |
| TTTATGTGCCCTTGATTCCA+TGG | + | chr7.3:4419201-4419220 | None:intergenic | 40.0% | |
| ! | ATTAGTCTAGCTACTAACCC+GGG | + | chr7.3:4419005-4419024 | None:intergenic | 40.0% |
| ! | CATTAGTCTAGCTACTAACC+CGG | + | chr7.3:4419006-4419025 | None:intergenic | 40.0% |
| ! | CTCGGTTTGTATTTGGTTTC+TGG | + | chr7.3:4419796-4419815 | None:intergenic | 40.0% |
| ! | GGAATCAAGGGCACATAAAA+TGG | - | chr7.3:4419202-4419221 | MS.gene072558:intron | 40.0% |
| ! | GGGTTAGTAGCTAGACTAAT+GGG | - | chr7.3:4419005-4419024 | MS.gene072558:intron | 40.0% |
| ! | GTCAACACCAAATCTAGTTC+TGG | + | chr7.3:4420320-4420339 | None:intergenic | 40.0% |
| !! | AATGACATGAGCACTGGATA+TGG | - | chr7.3:4422121-4422140 | MS.gene072558:intron | 40.0% |
| !! | AGATTTGGTGTTGACTCTCT+TGG | - | chr7.3:4420325-4420344 | MS.gene072558:CDS | 40.0% |
| !! | AGTAGCTAGACTAATGGGTT+TGG | - | chr7.3:4419010-4419029 | MS.gene072558:intron | 40.0% |
| !! | ATGACATGAGCACTGGATAT+GGG | - | chr7.3:4422122-4422141 | MS.gene072558:intron | 40.0% |
| !! | GATTTGGTGTTGACTCTCTT+GGG | - | chr7.3:4420326-4420345 | MS.gene072558:CDS | 40.0% |
| !! | GGAATAGAGTTTTATCAGGC+GGG | - | chr7.3:4419411-4419430 | MS.gene072558:CDS | 40.0% |
| !! | GGTATTGGTGTTAACCATAC+TGG | + | chr7.3:4420539-4420558 | None:intergenic | 40.0% |
| !! | TCGACTAGCTTTCTAGACAT+GGG | + | chr7.3:4419500-4419519 | None:intergenic | 40.0% |
| !! | TGCTGATTCATGTTAAGCAC+TGG | + | chr7.3:4420634-4420653 | None:intergenic | 40.0% |
| AAACCGTAATGGCAATGTGC+TGG | - | chr7.3:4419838-4419857 | MS.gene072558:CDS | 45.0% | |
| AACTGCAGAAGTTTCAAGGC+AGG | - | chr7.3:4418730-4418749 | MS.gene072558:CDS | 45.0% | |
| AAGCAGACAGCAAAAAGTGG+GGG | + | chr7.3:4418812-4418831 | None:intergenic | 45.0% | |
| AAGCTAGTCGACCCAAACAA+TGG | - | chr7.3:4419509-4419528 | MS.gene072558:CDS | 45.0% | |
| ACTGCAGAAGTTTCAAGGCA+GGG | - | chr7.3:4418731-4418750 | MS.gene072558:CDS | 45.0% | |
| AGAAGTTTCAAGGCAGGGAA+AGG | - | chr7.3:4418736-4418755 | MS.gene072558:CDS | 45.0% | |
| AGCCTAAAAGGTCAAGCTCT+AGG | - | chr7.3:4420014-4420033 | MS.gene072558:CDS | 45.0% | |
| ATTAGAGAGAGAGAGAGACG+TGG | + | chr7.3:4418341-4418360 | None:intergenic | 45.0% | |
| CAAATTGTAAGCCTGGTGAG+AGG | - | chr7.3:4419540-4419559 | MS.gene072558:intron | 45.0% | |
| CACATATTGCCCCATAGACA+TGG | + | chr7.3:4421681-4421700 | None:intergenic | 45.0% | |
| CATGTCTATGGGGCAATATG+TGG | - | chr7.3:4421679-4421698 | MS.gene072558:intron | 45.0% | |
| CTATCGCTGTTGTTCAAGTG+AGG | - | chr7.3:4420606-4420625 | MS.gene072558:CDS | 45.0% | |
| CTATTCCTCGTATATGGCTG+AGG | + | chr7.3:4419398-4419417 | None:intergenic | 45.0% | |
| GAAGACTTCTCCGACTTAAG+TGG | + | chr7.3:4419170-4419189 | None:intergenic | 45.0% | |
| GAATGCAGCTCATGTAATGG+AGG | - | chr7.3:4419346-4419365 | MS.gene072558:intron | 45.0% | |
| GACAGTGAAGACAGTGCATA+TGG | - | chr7.3:4421061-4421080 | MS.gene072558:CDS | 45.0% | |
| GAGAACCATCAGAGTACATC+AGG | - | chr7.3:4421869-4421888 | MS.gene072558:intron | 45.0% | |
| GCCTAAAAGGTCAAGCTCTA+GGG | - | chr7.3:4420015-4420034 | MS.gene072558:CDS | 45.0% | |
| GCGGCTGCTAAGATAATTGA+TGG | - | chr7.3:4419368-4419387 | MS.gene072558:intron | 45.0% | |
| GTACCAGCACATTGCCATTA+CGG | + | chr7.3:4419844-4419863 | None:intergenic | 45.0% | |
| GTGGCTGTCACACAAATATG+TGG | - | chr7.3:4421698-4421717 | MS.gene072558:CDS | 45.0% | |
| GTTGCAAATCATGGCCTAGA+TGG | - | chr7.3:4421996-4422015 | MS.gene072558:intron | 45.0% | |
| TAGACTCAGTAAATGGCGTG+TGG | + | chr7.3:4420832-4420851 | None:intergenic | 45.0% | |
| TCAGTGTACCGTAATCTCAG+AGG | - | chr7.3:4420471-4420490 | MS.gene072558:CDS | 45.0% | |
| TTGGGATGCCATGGAATCAA+GGG | - | chr7.3:4419190-4419209 | MS.gene072558:intron | 45.0% | |
| ! | CCACCTATCTAGAACCTGTT+TGG | - | chr7.3:4418397-4418416 | MS.gene072558:CDS | 45.0% |
| ! | GCAAGACAAAGCATCCAGTA+TGG | - | chr7.3:4420522-4420541 | MS.gene072558:CDS | 45.0% |
| ! | GGCAATGCTCGGTTTGTATT+TGG | + | chr7.3:4419803-4419822 | None:intergenic | 45.0% |
| ! | TCTGAGATTACGGTACACTG+AGG | + | chr7.3:4420472-4420491 | None:intergenic | 45.0% |
| ! | TCTGGTTTCCATCACTTGCT+CGG | + | chr7.3:4420302-4420321 | None:intergenic | 45.0% |
| ! | TTTGTAGTGATGAGGGGTGT+GGG | - | chr7.3:4418970-4418989 | MS.gene072558:intron | 45.0% |
| !! | AACTCGTGTTGTCGGCTTAT+TGG | + | chr7.3:4419927-4419946 | None:intergenic | 45.0% |
| !! | AGAAGGCTCCTCTGAGATTA+CGG | + | chr7.3:4420482-4420501 | None:intergenic | 45.0% |
| !! | CCAAACAGGTTCTAGATAGG+TGG | + | chr7.3:4418400-4418419 | None:intergenic | 45.0% |
| !! | CGGGTTAGTAGCTAGACTAA+TGG | - | chr7.3:4419004-4419023 | MS.gene072558:intron | 45.0% |
| !! | GGTTCTAGATAGGTGGACAA+AGG | + | chr7.3:4418393-4418412 | None:intergenic | 45.0% |
| !! | GTCGACTAGCTTTCTAGACA+TGG | + | chr7.3:4419501-4419520 | None:intergenic | 45.0% |
| !! | TGAGCACTGGATATGGGAAA+TGG | - | chr7.3:4422128-4422147 | MS.gene072558:intron | 45.0% |
| !!! | TTTTATTTGATTTATTTTTT+TGG | - | chr7.3:4418863-4418882 | MS.gene072558:CDS | 5.0% |
| AAGAGGGGTCAGAGGTTGAA+GGG | - | chr7.3:4422176-4422195 | MS.gene072558:CDS | 50.0% | |
| ACATGAGCTGCATTCTTCGG+CGG | + | chr7.3:4419341-4419360 | None:intergenic | 50.0% | |
| AGCAGACAGCAAAAAGTGGG+GGG | + | chr7.3:4418811-4418830 | None:intergenic | 50.0% | |
| AGCATTTGAAGAGGGGTCAG+AGG | - | chr7.3:4422168-4422187 | MS.gene072558:CDS | 50.0% | |
| ATCTCAGAGGAGCCTTCTAC+TGG | - | chr7.3:4420484-4420503 | MS.gene072558:CDS | 50.0% | |
| CAGGAAGAAACTGATCGGCA+CGG | + | chr7.3:4421543-4421562 | None:intergenic | 50.0% | |
| CATGGATGACTATCGTCGTG+CGG | - | chr7.3:4419130-4419149 | MS.gene072558:intron | 50.0% | |
| CTTGGGATGCCATGGAATCA+AGG | - | chr7.3:4419189-4419208 | MS.gene072558:intron | 50.0% | |
| GAAGTCTTCTTGGGATGCCA+TGG | - | chr7.3:4419181-4419200 | MS.gene072558:intron | 50.0% | |
| GGAGCTGAATAGTGAAGCAC+CGG | + | chr7.3:4419069-4419088 | None:intergenic | 50.0% | |
| GGTTGTCAGCATTCTGATGC+TGG | - | chr7.3:4420998-4421017 | MS.gene072558:CDS | 50.0% | |
| GTCTGCAATGACATGAGCAC+TGG | - | chr7.3:4422115-4422134 | MS.gene072558:intron | 50.0% | |
| GTTTGTAGTGATGAGGGGTG+TGG | - | chr7.3:4418969-4418988 | MS.gene072558:intron | 50.0% | |
| TCGGGCACACTTCTCTTCAA+GGG | + | chr7.3:4420265-4420284 | None:intergenic | 50.0% | |
| TCTTTGCCAACTTCGGACGT+CGG | - | chr7.3:4419035-4419054 | MS.gene072558:intron | 50.0% | |
| TGATCAGGACTTCTTGCCTC+AGG | + | chr7.3:4420121-4420140 | None:intergenic | 50.0% | |
| TGGATGGGGGAAACTCCTTT+CGG | + | chr7.3:4420051-4420070 | None:intergenic | 50.0% | |
| ! | ACGTTTTCTGCGGCAATGCT+CGG | + | chr7.3:4419814-4419833 | None:intergenic | 50.0% |
| ! | ATGGGTTTAGCCGACTTTGG+AGG | + | chr7.3:4419266-4419285 | None:intergenic | 50.0% |
| ! | CGGTTTGCACACGTTTTCTG+CGG | + | chr7.3:4419824-4419843 | None:intergenic | 50.0% |
| ! | GCCCTAGAGCTTGACCTTTT+AGG | + | chr7.3:4420019-4420038 | None:intergenic | 50.0% |
| ! | GGAATGGGTTTAGCCGACTT+TGG | + | chr7.3:4419269-4419288 | None:intergenic | 50.0% |
| ! | TGCAGCTCATGTAATGGAGG+CGG | - | chr7.3:4419349-4419368 | MS.gene072558:intron | 50.0% |
| !! | AAACGGTGCTGCCTGAAAAC+AGG | + | chr7.3:4421562-4421581 | None:intergenic | 50.0% |
| AGAGGGGTCAGAGGTTGAAG+GGG | - | chr7.3:4422177-4422196 | MS.gene072558:CDS | 55.0% | |
| ATCCTCTGCCGAGCAAGTGA+TGG | - | chr7.3:4420291-4420310 | MS.gene072558:CDS | 55.0% | |
| CGCACGACGATAGTCATCCA+TGG | + | chr7.3:4419132-4419151 | None:intergenic | 55.0% | |
| CTCGGCAGAGGATAGTGACT+CGG | + | chr7.3:4420284-4420303 | None:intergenic | 55.0% | |
| CTCGGGCACACTTCTCTTCA+AGG | + | chr7.3:4420266-4420285 | None:intergenic | 55.0% | |
| GAAGAGGGGTCAGAGGTTGA+AGG | - | chr7.3:4422175-4422194 | MS.gene072558:CDS | 55.0% | |
| GAAGCCCTCAGCCATATACG+AGG | - | chr7.3:4419390-4419409 | MS.gene072558:intron | 55.0% | |
| TCGGCAGAGGATAGTGACTC+GGG | + | chr7.3:4420283-4420302 | None:intergenic | 55.0% | |
| TTCCATCACTTGCTCGGCAG+AGG | + | chr7.3:4420296-4420315 | None:intergenic | 55.0% | |
| !! | GTTTCTGGCTCCTTGTGAGC+TGG | + | chr7.3:4419781-4419800 | None:intergenic | 55.0% |
| !! | TGACAGCAGAGGTGTTCCTG+AGG | - | chr7.3:4420102-4420121 | MS.gene072558:CDS | 55.0% |
| !! | TGAGGGTGCTCTTCGTTCCA+TGG | - | chr7.3:4419112-4419131 | MS.gene072558:intron | 55.0% |
| AGCTCACCGACGTCCGAAGT+TGG | + | chr7.3:4419044-4419063 | None:intergenic | 60.0% | |
| GGGTGTGGGAGTAAAGCTCC+CGG | - | chr7.3:4418984-4419003 | MS.gene072558:intron | 60.0% | |
| GGTGTGGGAGTAAAGCTCCC+GGG | - | chr7.3:4418985-4419004 | MS.gene072558:intron | 60.0% | |
| TCGGACGTCGGTGAGCTCTC+CGG | - | chr7.3:4419047-4419066 | MS.gene072558:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 4418226 | 4422252 | 4418226 | ID=MS.gene072558 |
| chr7.3 | mRNA | 4418226 | 4422252 | 4418226 | ID=MS.gene072558.t1;Parent=MS.gene072558 |
| chr7.3 | exon | 4422156 | 4422252 | 4422156 | ID=MS.gene072558.t1.exon1;Parent=MS.gene072558.t1 |
| chr7.3 | CDS | 4422156 | 4422252 | 4422156 | ID=cds.MS.gene072558.t1;Parent=MS.gene072558.t1 |
| chr7.3 | exon | 4421682 | 4421740 | 4421682 | ID=MS.gene072558.t1.exon2;Parent=MS.gene072558.t1 |
| chr7.3 | CDS | 4421682 | 4421740 | 4421682 | ID=cds.MS.gene072558.t1;Parent=MS.gene072558.t1 |
| chr7.3 | exon | 4419818 | 4421569 | 4419818 | ID=MS.gene072558.t1.exon3;Parent=MS.gene072558.t1 |
| chr7.3 | CDS | 4419818 | 4421569 | 4419818 | ID=cds.MS.gene072558.t1;Parent=MS.gene072558.t1 |
| chr7.3 | exon | 4419396 | 4419540 | 4419396 | ID=MS.gene072558.t1.exon4;Parent=MS.gene072558.t1 |
| chr7.3 | CDS | 4419396 | 4419540 | 4419396 | ID=cds.MS.gene072558.t1;Parent=MS.gene072558.t1 |
| chr7.3 | exon | 4418226 | 4418908 | 4418226 | ID=MS.gene072558.t1.exon5;Parent=MS.gene072558.t1 |
| chr7.3 | CDS | 4418226 | 4418908 | 4418226 | ID=cds.MS.gene072558.t1;Parent=MS.gene072558.t1 |
| Gene Sequence |
| Protein sequence |
