Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45026.t1 | XP_003591202.3 | 79.5 | 810 | 142 | 7 | 1 | 804 | 3 | 794 | 0.00E+00 | 1127.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45026.t1 | A0A396JRD2 | 80.0 | 766 | 138 | 5 | 45 | 804 | 1 | 757 | 0.0e+00 | 1083.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene060803 | MS.gene45026 | 0.802957 | 4.38E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene45026 | MS.gene054400 | PPI |
| MS.gene45026 | MS.gene005297 | PPI |
| MS.gene45026 | MS.gene44175 | PPI |
| MS.gene45026 | MS.gene40803 | PPI |
| MS.gene45026 | MS.gene050959 | PPI |
| MS.gene45026 | MS.gene072558 | PPI |
| MS.gene072558 | MS.gene45026 | PPI |
| MS.gene45026 | MS.gene050756 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45026.t1 | MTR_1g083850 | 86.825 | 759 | 85 | 5 | 52 | 804 | 1 | 750 | 0.0 | 1288 |
| MS.gene45026.t1 | MTR_7g112030 | 47.624 | 926 | 347 | 27 | 1 | 804 | 1 | 910 | 0.0 | 664 |
| MS.gene45026.t1 | MTR_2g034810 | 28.984 | 935 | 497 | 34 | 8 | 801 | 12 | 920 | 7.63e-72 | 253 |
| MS.gene45026.t1 | MTR_7g082220 | 39.623 | 106 | 55 | 3 | 699 | 801 | 835 | 934 | 7.79e-13 | 72.8 |
| MS.gene45026.t1 | MTR_6g018770 | 28.492 | 179 | 107 | 8 | 635 | 801 | 708 | 877 | 3.52e-12 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45026.t1 | AT3G58650 | 29.384 | 861 | 493 | 30 | 1 | 801 | 4 | 809 | 4.10e-68 | 241 |
| MS.gene45026.t1 | AT5G26910 | 28.326 | 872 | 503 | 29 | 1 | 801 | 4 | 824 | 1.10e-59 | 218 |
| MS.gene45026.t1 | AT5G26910 | 28.408 | 873 | 502 | 30 | 1 | 801 | 4 | 825 | 1.34e-59 | 218 |
| MS.gene45026.t1 | AT5G26910 | 28.408 | 873 | 502 | 30 | 1 | 801 | 4 | 825 | 1.34e-59 | 218 |
| MS.gene45026.t1 | AT5G26910 | 29.659 | 499 | 285 | 17 | 1 | 440 | 4 | 495 | 1.08e-28 | 122 |
| MS.gene45026.t1 | AT3G05750 | 35.220 | 159 | 91 | 3 | 648 | 801 | 543 | 694 | 2.71e-14 | 77.4 |
| MS.gene45026.t1 | AT3G05750 | 35.220 | 159 | 91 | 3 | 648 | 801 | 543 | 694 | 2.71e-14 | 77.4 |
| MS.gene45026.t1 | AT3G05750 | 35.220 | 159 | 91 | 3 | 648 | 801 | 638 | 789 | 2.83e-14 | 77.4 |
| MS.gene45026.t1 | AT3G05750 | 35.220 | 159 | 91 | 3 | 648 | 801 | 646 | 797 | 3.19e-14 | 77.4 |
Find 156 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACCTGCTTAGTGATAAAT+TGG | 0.140845 | 1.3:-59476155 | MS.gene45026:CDS |
| TCTAAATATGCTGCATTCTT+AGG | 0.165931 | 1.3:+59477213 | None:intergenic |
| TACTCTTGTGCTGGACCTTT+TGG | 0.182095 | 1.3:+59476696 | None:intergenic |
| GACATTGAAGCCTTTGAAAA+TGG | 0.201384 | 1.3:-59474861 | MS.gene45026:CDS |
| TGACTTAAGAGCCATGTTTA+AGG | 0.207080 | 1.3:+59477398 | None:intergenic |
| TCTTGATCTGCAAGAGAAAT+TGG | 0.213960 | 1.3:-59477100 | MS.gene45026:CDS |
| TGAAGTTGATTTACCTTTGC+TGG | 0.221523 | 1.3:+59476819 | None:intergenic |
| TGAACCAAAGGCTCATAAAA+TGG | 0.230963 | 1.3:-59477352 | MS.gene45026:CDS |
| ATCACTACTAATTGATAATA+AGG | 0.265224 | 1.3:+59477524 | None:intergenic |
| ACAGGTTTGTGTTGACTTAT+TGG | 0.265851 | 1.3:+59476786 | None:intergenic |
| GCCTAAGAACGGTGCTGTTC+TGG | 0.287283 | 1.3:+59476845 | None:intergenic |
| TGTTGAATTTGAATGGAAAT+AGG | 0.295796 | 1.3:-59476918 | MS.gene45026:CDS |
| TTGTGATAAAAGTGTTTCTT+TGG | 0.305866 | 1.3:+59478051 | None:intergenic |
| TTCGGAAGAACTCTTTCTTT+TGG | 0.311731 | 1.3:+59476645 | None:intergenic |
| TACCTATTTGATAGATGAAT+TGG | 0.313922 | 1.3:-59474814 | MS.gene45026:CDS |
| AACCAATTCATCTTATATTC+AGG | 0.323610 | 1.3:+59475299 | None:intergenic |
| ATGAGTCTGGCTACTAGCCC+TGG | 0.328479 | 1.3:+59477477 | None:intergenic |
| AAAAGAATCAACATCAATTC+TGG | 0.330223 | 1.3:+59476399 | None:intergenic |
| CGAGAGATTCAGAAAATAAT+AGG | 0.330370 | 1.3:-59477011 | MS.gene45026:CDS |
| AAATAATTACCAGGTAAGTT+AGG | 0.347260 | 1.3:+59478027 | None:intergenic |
| TGAATCTCTCGAACCTTTGA+AGG | 0.348909 | 1.3:+59477023 | None:intergenic |
| CACCTGAATATAAGATGAAT+TGG | 0.375181 | 1.3:-59475301 | MS.gene45026:CDS |
| TAAGAATGCAGCATATTTAG+AGG | 0.380059 | 1.3:-59477211 | MS.gene45026:CDS |
| TTTATGAGCCTTTGGTTCAA+TGG | 0.380731 | 1.3:+59477356 | None:intergenic |
| GCCAACTCTCTTTGATCTGT+TGG | 0.381202 | 1.3:-59475171 | MS.gene45026:CDS |
| CTTATCAGTTACTCTTGTGC+TGG | 0.385816 | 1.3:+59476687 | None:intergenic |
| ACTCAGCAATGTAGAATTGA+TGG | 0.386018 | 1.3:-59475219 | MS.gene45026:CDS |
| AGGGATATGTTGAATTTGAA+TGG | 0.390361 | 1.3:-59476925 | MS.gene45026:CDS |
| ATGCAAGATGAAGAAGTATA+TGG | 0.393979 | 1.3:-59475347 | MS.gene45026:CDS |
| AACCAATTCATCTATCAAAT+AGG | 0.394619 | 1.3:+59474812 | None:intergenic |
| TGGCATGAATCAGCAACTTC+AGG | 0.397356 | 1.3:-59476086 | MS.gene45026:intron |
| TGAGCACTCCATTGGGTAGA+TGG | 0.402874 | 1.3:-59474893 | MS.gene45026:CDS |
| TCTTTGATCTGTTGGAGAAT+CGG | 0.419385 | 1.3:-59475163 | MS.gene45026:CDS |
| GGTCGAACTTTCTGAAGAAC+AGG | 0.421894 | 1.3:+59476768 | None:intergenic |
| TGTGCTCCTCATATATAGTT+GGG | 0.423119 | 1.3:+59477161 | None:intergenic |
| ATGAATTGGTTTCTGATTTG+TGG | 0.425319 | 1.3:-59474800 | MS.gene45026:CDS |
| TGAGTCTGGCTACTAGCCCT+GGG | 0.426455 | 1.3:+59477478 | None:intergenic |
| TCAAATTATGATACAATGCT+TGG | 0.428269 | 1.3:-59476106 | MS.gene45026:CDS |
| AGTAGCCAGACTCATGGGTT+TGG | 0.431579 | 1.3:-59477469 | MS.gene45026:CDS |
| TCCTACGAGGTTACATGTAA+TGG | 0.436748 | 1.3:-59476335 | MS.gene45026:CDS |
| ATATAACTTGCTCCTCATCT+TGG | 0.439222 | 1.3:+59477059 | None:intergenic |
| TACAAAATCATCAAGGATGA+TGG | 0.444399 | 1.3:-59475264 | MS.gene45026:CDS |
| AAAGGTTGGTTAGCAGAAGA+AGG | 0.447131 | 1.3:-59474987 | MS.gene45026:CDS |
| TTGTTATGAGTAACTGAAAT+GGG | 0.447444 | 1.3:+59477273 | None:intergenic |
| GAACCAAAGGCTCATAAAAT+GGG | 0.450651 | 1.3:-59477351 | MS.gene45026:CDS |
| TGAATCCAAACCCATGAGTC+TGG | 0.452723 | 1.3:+59477464 | None:intergenic |
| TGAAGCCTTTGAAAATGGCT+TGG | 0.457955 | 1.3:-59474856 | MS.gene45026:CDS |
| GCCAGAACAGCACCGTTCTT+AGG | 0.459790 | 1.3:-59476846 | MS.gene45026:CDS |
| TTACAGCTTGGATCTTCCAT+TGG | 0.460975 | 1.3:+59475875 | None:intergenic |
| TTTCATCAGCAAAAGTAACT+TGG | 0.461060 | 1.3:-59475783 | MS.gene45026:CDS |
| ACTGATGCCACCATGCATCT+AGG | 0.461328 | 1.3:+59475017 | None:intergenic |
| ACAATTGTTTCAGATAAAGA+TGG | 0.464516 | 1.3:-59477598 | MS.gene45026:intron |
| AAGAATACTCTAAGCTCAAA+AGG | 0.473263 | 1.3:-59475118 | MS.gene45026:CDS |
| GAAGGGTGTGATAAGGCCCC+AGG | 0.473540 | 1.3:-59477495 | MS.gene45026:CDS |
| AAAATGAAACTTTGTCTCCA+AGG | 0.473878 | 1.3:-59477305 | MS.gene45026:CDS |
| GTTTGTTATCGTCCTAGCGC+TGG | 0.478195 | 1.3:+59476747 | None:intergenic |
| CAAGGACATGAGCACTCCAT+TGG | 0.478271 | 1.3:-59474901 | MS.gene45026:CDS |
| GCTTCCTTAGCTTCTTTGAT+CGG | 0.480496 | 1.3:-59478086 | MS.gene45026:CDS |
| TTTCAATGTTTCCCTTTGCA+TGG | 0.487929 | 1.3:+59477905 | None:intergenic |
| TTTGTTATGAGTAACTGAAA+TGG | 0.489794 | 1.3:+59477272 | None:intergenic |
| GAAATAGAACGGTGTTCTGT+TGG | 0.491216 | 1.3:-59476256 | MS.gene45026:CDS |
| TTGTGCTCCTCATATATAGT+TGG | 0.491806 | 1.3:+59477160 | None:intergenic |
| TATCACAATCCTAACTTACC+TGG | 0.492317 | 1.3:-59478036 | MS.gene45026:intron |
| ATTCTAACATTGAATCCAAA+AGG | 0.492686 | 1.3:-59476711 | MS.gene45026:CDS |
| ATATACTTCTTCATCTTGCA+TGG | 0.495644 | 1.3:+59475349 | None:intergenic |
| ATTTCTGAGGCACATTGAGG+TGG | 0.497061 | 1.3:+59476274 | None:intergenic |
| AAGAGTAACTGATAAGCAAA+AGG | 0.502215 | 1.3:-59476680 | MS.gene45026:CDS |
| CTGTTGGAGAATCGGAGAAC+TGG | 0.510605 | 1.3:-59475155 | MS.gene45026:CDS |
| TGCCCAATTTATCACTAAGC+AGG | 0.510690 | 1.3:+59476152 | None:intergenic |
| AAGTCTACTTCAACCTTCAA+AGG | 0.512513 | 1.3:-59477036 | MS.gene45026:CDS |
| AATAGGTCTTGCCTAGGTAA+AGG | 0.513285 | 1.3:-59476994 | MS.gene45026:CDS |
| CTTTGAACCTCGGCATTGGA+TGG | 0.515084 | 1.3:+59476949 | None:intergenic |
| CCTACTTTGAACCTCGGCAT+TGG | 0.515663 | 1.3:+59476945 | None:intergenic |
| TGAAATCATGCCAATGTCAC+AGG | 0.515734 | 1.3:-59477887 | MS.gene45026:intron |
| GCATGGTATGCAACACATCA+AGG | 0.515846 | 1.3:-59476201 | MS.gene45026:CDS |
| CAGAAAGTTCGACCAGCGCT+AGG | 0.516699 | 1.3:-59476759 | MS.gene45026:CDS |
| CATTCCGATCAAAGAAGCTA+AGG | 0.517044 | 1.3:+59478082 | None:intergenic |
| GATGTTTCAAACCATGCAAA+GGG | 0.520211 | 1.3:-59477916 | MS.gene45026:CDS |
| CTGGTGTTTACCTGTGACAT+TGG | 0.521249 | 1.3:+59477877 | None:intergenic |
| GTTAGCAGAAGAAGGGTACA+AGG | 0.523262 | 1.3:-59474979 | MS.gene45026:CDS |
| TTGCAGATCAAGAGTTCTCA+AGG | 0.524434 | 1.3:+59477110 | None:intergenic |
| AAGCATGGAAGAAGAGGTGA+TGG | 0.525379 | 1.3:-59474940 | MS.gene45026:CDS |
| CATATAGCATGACAGAAAGC+AGG | 0.529033 | 1.3:-59476510 | MS.gene45026:CDS |
| GGGCTAGTAGCCAGACTCAT+GGG | 0.531216 | 1.3:-59477474 | MS.gene45026:CDS |
| AATGGAGAAAAGAAGTTACA+AGG | 0.533794 | 1.3:-59478112 | MS.gene45026:CDS |
| CAAGTCCCCAACTATATATG+AGG | 0.533920 | 1.3:-59477167 | MS.gene45026:CDS |
| GAAATGGGTTTAGCAGACCT+TGG | 0.538176 | 1.3:+59477288 | None:intergenic |
| GATGGAACTTGAATATGTAA+AGG | 0.538230 | 1.3:-59475246 | MS.gene45026:CDS |
| GATGTCGGAGTTTAGAAGCA+TGG | 0.546019 | 1.3:-59474955 | MS.gene45026:CDS |
| AAGGACATGAGCACTCCATT+GGG | 0.547496 | 1.3:-59474900 | MS.gene45026:CDS |
| CATCAGTGATGAGGAAAGGT+TGG | 0.550514 | 1.3:-59475001 | MS.gene45026:CDS |
| GCAGGCAAGTTCTTGTTGAA+AGG | 0.551031 | 1.3:-59475052 | MS.gene45026:CDS |
| GAAAATAATAGGTCTTGCCT+AGG | 0.551230 | 1.3:-59477000 | MS.gene45026:CDS |
| TCTATTTCTGAGGCACATTG+AGG | 0.551487 | 1.3:+59476271 | None:intergenic |
| TTGTGATACCATTGAACCAA+AGG | 0.551569 | 1.3:-59477364 | MS.gene45026:CDS |
| CAATGCCGAGGTTCAAAGTA+GGG | 0.554685 | 1.3:-59476944 | MS.gene45026:CDS |
| CCAATGCCGAGGTTCAAAGT+AGG | 0.555210 | 1.3:-59476945 | MS.gene45026:CDS |
| TATAAAATGTAATGTTACAA+TGG | 0.555302 | 1.3:-59476554 | MS.gene45026:CDS |
| AGGAGCACAATGTCTTCAGT+TGG | 0.557248 | 1.3:-59477147 | MS.gene45026:CDS |
| CATGGAAGAAGAGGTGATGG+TGG | 0.557606 | 1.3:-59474937 | MS.gene45026:CDS |
| AGGGCTAGTAGCCAGACTCA+TGG | 0.557813 | 1.3:-59477475 | MS.gene45026:CDS |
| ATGGAGAAAAGAAGTTACAA+GGG | 0.561403 | 1.3:-59478111 | MS.gene45026:CDS |
| GTTTAGAAGCATGGAAGAAG+AGG | 0.561464 | 1.3:-59474946 | MS.gene45026:CDS |
| TTACATTTACATCTCCATTG+AGG | 0.562743 | 1.3:-59476474 | MS.gene45026:CDS |
| TTTGCTGGTTTGCCTAAGAA+CGG | 0.562748 | 1.3:+59476834 | None:intergenic |
| AGAGTTCTTCCGAAAAGAAG+AGG | 0.565687 | 1.3:-59476636 | MS.gene45026:CDS |
| CTAAGCAAGTGATGGAAACA+AGG | 0.566796 | 1.3:-59476423 | MS.gene45026:CDS |
| TCCAACAGATCAAAGAGAGT+TGG | 0.567522 | 1.3:+59475170 | None:intergenic |
| TGATGATGAAGGGTGTGATA+AGG | 0.567960 | 1.3:-59477502 | MS.gene45026:CDS |
| ATTAGTAGTGATGATGATGA+AGG | 0.568918 | 1.3:-59477513 | MS.gene45026:CDS |
| AGAAGGGTACAAGGAGATGT+CGG | 0.578044 | 1.3:-59474970 | MS.gene45026:CDS |
| TCTTAGGCTTCATACTAACA+TGG | 0.580559 | 1.3:+59477229 | None:intergenic |
| TAGTGATAAATTGGGCAGCA+TGG | 0.582742 | 1.3:-59476146 | MS.gene45026:CDS |
| AGAACACCGTTCTATTTCTG+AGG | 0.582791 | 1.3:+59476261 | None:intergenic |
| GTCGACTACTAAGCAAGTGA+TGG | 0.583625 | 1.3:-59476431 | MS.gene45026:CDS |
| AACCTGCTTAGTGATAAATT+GGG | 0.585492 | 1.3:-59476154 | MS.gene45026:CDS |
| TCACTTAGATTCCTTAAACA+TGG | 0.585838 | 1.3:-59477409 | MS.gene45026:CDS |
| TCTGTAGATATCAGAACCAA+TGG | 0.586401 | 1.3:-59475891 | MS.gene45026:intron |
| TCACTACTTGCAATATCACT+AGG | 0.586974 | 1.3:+59477558 | None:intergenic |
| TTGTTGAAAGGTGCAAAGCA+TGG | 0.588420 | 1.3:-59475040 | MS.gene45026:CDS |
| AATGCATGGAATTAAGATGC+AGG | 0.588770 | 1.3:-59475070 | MS.gene45026:CDS |
| AGATGTTTCAAACCATGCAA+AGG | 0.589368 | 1.3:-59477917 | MS.gene45026:CDS |
| TTTCTGAGGCACATTGAGGT+GGG | 0.592064 | 1.3:+59476275 | None:intergenic |
| AAAGCTCTACAAAATCATCA+AGG | 0.594973 | 1.3:-59475271 | MS.gene45026:CDS |
| TAAGTGACAACATAATGAAG+TGG | 0.601855 | 1.3:+59477425 | None:intergenic |
| CATATCCCTACTTTGAACCT+CGG | 0.606736 | 1.3:+59476939 | None:intergenic |
| AAGTCAAGCCATCTACCCAA+TGG | 0.609117 | 1.3:+59474885 | None:intergenic |
| AAGGTTGGTTAGCAGAAGAA+GGG | 0.610456 | 1.3:-59474986 | MS.gene45026:CDS |
| GTGCTCCTCATATATAGTTG+GGG | 0.610822 | 1.3:+59477162 | None:intergenic |
| CGCAACACGGAACCAAGATG+AGG | 0.611483 | 1.3:-59477071 | MS.gene45026:CDS |
| AGAAGACAGATTTAACAGCA+TGG | 0.621284 | 1.3:-59476218 | MS.gene45026:CDS |
| GTGACAACATAATGAAGTGG+AGG | 0.623561 | 1.3:+59477428 | None:intergenic |
| GTTCTTAGGCAAACCAGCAA+AGG | 0.627546 | 1.3:-59476832 | MS.gene45026:CDS |
| CATGGTATGCAACACATCAA+GGG | 0.628447 | 1.3:-59476200 | MS.gene45026:CDS |
| CAAAGCATGGCCTAGATGCA+TGG | 0.630631 | 1.3:-59475027 | MS.gene45026:CDS |
| TGACTGTGTAAGTGAATGCA+TGG | 0.630868 | 1.3:-59475084 | MS.gene45026:CDS |
| GGTGGATGAGCTTGTTAGCA+AGG | 0.631696 | 1.3:-59474919 | MS.gene45026:CDS |
| CAGATAAAGATGGATGACAA+TGG | 0.635008 | 1.3:-59477588 | MS.gene45026:CDS |
| GATAGTGAAGATAGCACATG+TGG | 0.644975 | 1.3:-59475761 | MS.gene45026:intron |
| ATATAGCATGACAGAAAGCA+GGG | 0.649280 | 1.3:-59476509 | MS.gene45026:CDS |
| TGCAGATCAAGAGTTCTCAA+GGG | 0.654144 | 1.3:+59477111 | None:intergenic |
| GAGTCTGGCTACTAGCCCTG+GGG | 0.654903 | 1.3:+59477479 | None:intergenic |
| AATGTGCCTCAGAAATAGAA+CGG | 0.658499 | 1.3:-59476267 | MS.gene45026:CDS |
| AAGGGTGTGATAAGGCCCCA+GGG | 0.660078 | 1.3:-59477494 | MS.gene45026:CDS |
| TCCATTACATGTAACCTCGT+AGG | 0.664556 | 1.3:+59476334 | None:intergenic |
| CGTGATCAGAATGACGCACG+AGG | 0.670720 | 1.3:-59476613 | MS.gene45026:CDS |
| GGCATCTGCTAAGAGCATTG+AGG | 0.678302 | 1.3:-59477190 | MS.gene45026:CDS |
| GCATGGTGGCATCAGTGATG+AGG | 0.679121 | 1.3:-59475010 | MS.gene45026:CDS |
| TTAGTAGTGATGATGATGAA+GGG | 0.685067 | 1.3:-59477512 | MS.gene45026:CDS |
| GTGGCATCAGTGATGAGGAA+AGG | 0.685249 | 1.3:-59475005 | MS.gene45026:CDS |
| GGAGAATCGGAGAACTGGTG+TGG | 0.691183 | 1.3:-59475150 | MS.gene45026:CDS |
| TGTAACACCATCCAATGCCG+AGG | 0.692381 | 1.3:-59476956 | MS.gene45026:CDS |
| AAATTGGAAACAGCGCAACA+CGG | 0.695462 | 1.3:-59477084 | MS.gene45026:CDS |
| AGCATGGCCTAGATGCATGG+TGG | 0.715972 | 1.3:-59475024 | MS.gene45026:CDS |
| AATTATCATTATCTCCTACG+AGG | 0.717855 | 1.3:-59476348 | MS.gene45026:CDS |
| AGGACGATAACAAACAAATG+CGG | 0.767520 | 1.3:-59476739 | MS.gene45026:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGTAATAATAATAAGAA+AGG | + | chr1.3:59475290-59475309 | None:intergenic | 10.0% |
| !! | ATTGTAATAATAATAAGAAA+GGG | + | chr1.3:59475289-59475308 | None:intergenic | 10.0% |
| !! | TATAAAATGTAATGTTACAA+TGG | - | chr1.3:59476348-59476367 | MS.gene45026:CDS | 15.0% |
| !! | AAGAAAAAAATGGTTAAACT+AGG | + | chr1.3:59475078-59475097 | None:intergenic | 20.0% |
| !! | TAAACATAGTATATTATCCT+TGG | - | chr1.3:59476912-59476931 | MS.gene45026:CDS | 20.0% |
| !!! | ATCACTACTAATTGATAATA+AGG | + | chr1.3:59475381-59475400 | None:intergenic | 20.0% |
| !!! | GAACAAGCATTAATATTTTA+TGG | + | chr1.3:59477492-59477511 | None:intergenic | 20.0% |
| !!! | TCATATATAACCCTTTTTTT+AGG | - | chr1.3:59477510-59477529 | MS.gene45026:CDS | 20.0% |
| !!! | TTACTCATTTTCATTTGTTA+TGG | - | chr1.3:59476866-59476885 | MS.gene45026:CDS | 20.0% |
| ! | AAAAGAATCAACATCAATTC+TGG | + | chr1.3:59476506-59476525 | None:intergenic | 25.0% |
| ! | AAAGACTAGAAATAATTACC+AGG | + | chr1.3:59474887-59474906 | None:intergenic | 25.0% |
| ! | AAATAATTACCAGGTAAGTT+AGG | + | chr1.3:59474878-59474897 | None:intergenic | 25.0% |
| ! | AACCAATTCATCTATCAAAT+AGG | + | chr1.3:59478093-59478112 | None:intergenic | 25.0% |
| ! | AACCAATTCATCTTATATTC+AGG | + | chr1.3:59477606-59477625 | None:intergenic | 25.0% |
| ! | ACAATTGTTTCAGATAAAGA+TGG | - | chr1.3:59475304-59475323 | MS.gene45026:CDS | 25.0% |
| ! | ACTTCAAAGTTAAGCAAAAT+TGG | + | chr1.3:59477319-59477338 | None:intergenic | 25.0% |
| ! | ATTCTAACATTGAATCCAAA+AGG | - | chr1.3:59476191-59476210 | MS.gene45026:CDS | 25.0% |
| ! | GAGCAAAAAATATTCAGAAT+AGG | + | chr1.3:59474955-59474974 | None:intergenic | 25.0% |
| ! | GTCTTAACAAAATGTCATTA+GGG | + | chr1.3:59475143-59475162 | None:intergenic | 25.0% |
| ! | TACCTATTTGATAGATGAAT+TGG | - | chr1.3:59478088-59478107 | MS.gene45026:CDS | 25.0% |
| ! | TCAAACCAGAAAAATTGTAA+TGG | - | chr1.3:59476034-59476053 | MS.gene45026:intron | 25.0% |
| ! | TCAAATTATGATACAATGCT+TGG | - | chr1.3:59476796-59476815 | MS.gene45026:CDS | 25.0% |
| ! | TGTAACAACAAAAATGAAAG+CGG | - | chr1.3:59477045-59477064 | MS.gene45026:CDS | 25.0% |
| ! | TGTCTTAACAAAATGTCATT+AGG | + | chr1.3:59475144-59475163 | None:intergenic | 25.0% |
| ! | TGTTGAATTTGAATGGAAAT+AGG | - | chr1.3:59475984-59476003 | MS.gene45026:intron | 25.0% |
| ! | TTAAACTAGGAAACTAAGAA+AGG | + | chr1.3:59475065-59475084 | None:intergenic | 25.0% |
| ! | TTGTTATGAGTAACTGAAAT+GGG | + | chr1.3:59475632-59475651 | None:intergenic | 25.0% |
| !! | CTACATAAAACTTCCTTTTT+AGG | - | chr1.3:59475225-59475244 | MS.gene45026:CDS | 25.0% |
| !! | GGAGATAATGATAATTTTTC+AGG | + | chr1.3:59476550-59476569 | None:intergenic | 25.0% |
| !! | TTTGTTATGAGTAACTGAAA+TGG | + | chr1.3:59475633-59475652 | None:intergenic | 25.0% |
| !!! | TATATAACCCTTTTTTTAGG+AGG | - | chr1.3:59477513-59477532 | MS.gene45026:CDS | 25.0% |
| !!! | TTGTGATAAAAGTGTTTCTT+TGG | + | chr1.3:59474854-59474873 | None:intergenic | 25.0% |
| AAAATGAAACTTTGTCTCCA+AGG | - | chr1.3:59475597-59475616 | MS.gene45026:intron | 30.0% | |
| AAAGCTCTACAAAATCATCA+AGG | - | chr1.3:59477631-59477650 | MS.gene45026:intron | 30.0% | |
| AAAGGTTGAAAAAATCACAC+TGG | + | chr1.3:59475047-59475066 | None:intergenic | 30.0% | |
| AACCTGCTTAGTGATAAATT+GGG | - | chr1.3:59476748-59476767 | MS.gene45026:CDS | 30.0% | |
| AAGAATACTCTAAGCTCAAA+AGG | - | chr1.3:59477784-59477803 | MS.gene45026:intron | 30.0% | |
| AAGAGTAACTGATAAGCAAA+AGG | - | chr1.3:59476222-59476241 | MS.gene45026:CDS | 30.0% | |
| AATTATCATTATCTCCTACG+AGG | - | chr1.3:59476554-59476573 | MS.gene45026:CDS | 30.0% | |
| AGGGATATGTTGAATTTGAA+TGG | - | chr1.3:59475977-59475996 | MS.gene45026:intron | 30.0% | |
| ATATACTTCTTCATCTTGCA+TGG | + | chr1.3:59477556-59477575 | None:intergenic | 30.0% | |
| ATATCTACAGAAGAGAAGAA+TGG | + | chr1.3:59477002-59477021 | None:intergenic | 30.0% | |
| ATGGAGAAAAGAAGTTACAA+GGG | - | chr1.3:59474791-59474810 | MS.gene45026:CDS | 30.0% | |
| CACCTGAATATAAGATGAAT+TGG | - | chr1.3:59477601-59477620 | MS.gene45026:intron | 30.0% | |
| CGAGAGATTCAGAAAATAAT+AGG | - | chr1.3:59475891-59475910 | MS.gene45026:intron | 30.0% | |
| GATGGAACTTGAATATGTAA+AGG | - | chr1.3:59477656-59477675 | MS.gene45026:intron | 30.0% | |
| GCAAAATTATTCTTATCAGC+TGG | - | chr1.3:59477293-59477312 | MS.gene45026:CDS | 30.0% | |
| TAAGAATGCAGCATATTTAG+AGG | - | chr1.3:59475691-59475710 | MS.gene45026:intron | 30.0% | |
| TAAGTGACAACATAATGAAG+TGG | + | chr1.3:59475480-59475499 | None:intergenic | 30.0% | |
| TACAAAATCATCAAGGATGA+TGG | - | chr1.3:59477638-59477657 | MS.gene45026:intron | 30.0% | |
| TCACTTAGATTCCTTAAACA+TGG | - | chr1.3:59475493-59475512 | MS.gene45026:intron | 30.0% | |
| TCTAAATATGCTGCATTCTT+AGG | + | chr1.3:59475692-59475711 | None:intergenic | 30.0% | |
| TTACATTTACATCTCCATTG+AGG | - | chr1.3:59476428-59476447 | MS.gene45026:CDS | 30.0% | |
| TTTCATCAGCAAAAGTAACT+TGG | - | chr1.3:59477119-59477138 | MS.gene45026:CDS | 30.0% | |
| ! | ACTTGTTAAGAAGCCTAAAA+AGG | + | chr1.3:59475241-59475260 | None:intergenic | 30.0% |
| ! | ATACTAACATGGCTTTTGAT+AGG | + | chr1.3:59475665-59475684 | None:intergenic | 30.0% |
| ! | ATGAATTGGTTTCTGATTTG+TGG | - | chr1.3:59478102-59478121 | MS.gene45026:CDS | 30.0% |
| ! | ATGCAAGATGAAGAAGTATA+TGG | - | chr1.3:59477555-59477574 | MS.gene45026:CDS | 30.0% |
| ! | ATTAGTAGTGATGATGATGA+AGG | - | chr1.3:59475389-59475408 | MS.gene45026:intron | 30.0% |
| ! | TGAGATATGTTTTTCCTCAA+TGG | + | chr1.3:59476445-59476464 | None:intergenic | 30.0% |
| ! | TTAGTAGTGATGATGATGAA+GGG | - | chr1.3:59475390-59475409 | MS.gene45026:intron | 30.0% |
| ! | TTCTTTTCATCACGTTGATA+AGG | - | chr1.3:59476519-59476538 | MS.gene45026:CDS | 30.0% |
| !! | AAATTCCAAGCCATTTTCAA+AGG | + | chr1.3:59478054-59478073 | None:intergenic | 30.0% |
| !!! | AAGTTACTTTTGCTGATGAA+AGG | + | chr1.3:59477120-59477139 | None:intergenic | 30.0% |
| !!! | TCATTTTTGTTGTTACAGCT+TGG | + | chr1.3:59477042-59477061 | None:intergenic | 30.0% |
| AAGTCTACTTCAACCTTCAA+AGG | - | chr1.3:59475866-59475885 | MS.gene45026:CDS | 35.0% | |
| AATGCATGGAATTAAGATGC+AGG | - | chr1.3:59477832-59477851 | MS.gene45026:intron | 35.0% | |
| AATGTGCCTCAGAAATAGAA+CGG | - | chr1.3:59476635-59476654 | MS.gene45026:CDS | 35.0% | |
| ACTCAGCAATGTAGAATTGA+TGG | - | chr1.3:59477683-59477702 | MS.gene45026:intron | 35.0% | |
| AGAAGACAGATTTAACAGCA+TGG | - | chr1.3:59476684-59476703 | MS.gene45026:CDS | 35.0% | |
| AGATGTTTCAAACCATGCAA+AGG | - | chr1.3:59474985-59475004 | MS.gene45026:CDS | 35.0% | |
| AGGACGATAACAAACAAATG+CGG | - | chr1.3:59476163-59476182 | MS.gene45026:CDS | 35.0% | |
| ATATAGCATGACAGAAAGCA+GGG | - | chr1.3:59476393-59476412 | MS.gene45026:CDS | 35.0% | |
| ATCAGTTAGTCAAAGAGATG+AGG | - | chr1.3:59476947-59476966 | MS.gene45026:CDS | 35.0% | |
| CAGATAAAGATGGATGACAA+TGG | - | chr1.3:59475314-59475333 | MS.gene45026:CDS | 35.0% | |
| GAAAATAATAGGTCTTGCCT+AGG | - | chr1.3:59475902-59475921 | MS.gene45026:intron | 35.0% | |
| GAACCAAAGGCTCATAAAAT+GGG | - | chr1.3:59475551-59475570 | MS.gene45026:intron | 35.0% | |
| GAACCTGCTTAGTGATAAAT+TGG | - | chr1.3:59476747-59476766 | MS.gene45026:CDS | 35.0% | |
| GATGTTTCAAACCATGCAAA+GGG | - | chr1.3:59474986-59475005 | MS.gene45026:CDS | 35.0% | |
| TATCACAATCCTAACTTACC+TGG | - | chr1.3:59474866-59474885 | MS.gene45026:CDS | 35.0% | |
| TATTATCCTTGGCAACTTTC+TGG | - | chr1.3:59476923-59476942 | MS.gene45026:CDS | 35.0% | |
| TCACTACTTGCAATATCACT+AGG | + | chr1.3:59475347-59475366 | None:intergenic | 35.0% | |
| TCGTGCTAACAAATTCTGTA+AGG | + | chr1.3:59475266-59475285 | None:intergenic | 35.0% | |
| TCTCAAGGTTATTCAAAGCA+TGG | + | chr1.3:59477267-59477286 | None:intergenic | 35.0% | |
| TCTGTAGATATCAGAACCAA+TGG | - | chr1.3:59477011-59477030 | MS.gene45026:CDS | 35.0% | |
| TCTTAGGCTTCATACTAACA+TGG | + | chr1.3:59475676-59475695 | None:intergenic | 35.0% | |
| TCTTGATCTGCAAGAGAAAT+TGG | - | chr1.3:59475802-59475821 | MS.gene45026:CDS | 35.0% | |
| TCTTTGATCTGTTGGAGAAT+CGG | - | chr1.3:59477739-59477758 | MS.gene45026:intron | 35.0% | |
| TGAACCAAAGGCTCATAAAA+TGG | - | chr1.3:59475550-59475569 | MS.gene45026:intron | 35.0% | |
| TGACTTAAGAGCCATGTTTA+AGG | + | chr1.3:59475507-59475526 | None:intergenic | 35.0% | |
| TGTGCTCCTCATATATAGTT+GGG | + | chr1.3:59475744-59475763 | None:intergenic | 35.0% | |
| TTGTGATACCATTGAACCAA+AGG | - | chr1.3:59475538-59475557 | MS.gene45026:intron | 35.0% | |
| TTGTGCTCCTCATATATAGT+TGG | + | chr1.3:59475745-59475764 | None:intergenic | 35.0% | |
| TTTCAATGTTTCCCTTTGCA+TGG | + | chr1.3:59475000-59475019 | None:intergenic | 35.0% | |
| ! | AAGCAGATTTTCCTTTACCT+AGG | + | chr1.3:59475922-59475941 | None:intergenic | 35.0% |
| ! | CAGAAGTGTAAAGACAATCA+AGG | + | chr1.3:59477179-59477198 | None:intergenic | 35.0% |
| ! | GACATTGAAGCCTTTGAAAA+TGG | - | chr1.3:59478041-59478060 | MS.gene45026:CDS | 35.0% |
| ! | TAATTTTGCAGCATGTCTCA+AGG | + | chr1.3:59477282-59477301 | None:intergenic | 35.0% |
| ! | TCTGGCCATTACAATTTTTC+TGG | + | chr1.3:59476042-59476061 | None:intergenic | 35.0% |
| ! | TGAAGTTGATTTACCTTTGC+TGG | + | chr1.3:59476086-59476105 | None:intergenic | 35.0% |
| ! | TTCGGAAGAACTCTTTCTTT+TGG | + | chr1.3:59476260-59476279 | None:intergenic | 35.0% |
| ! | TTTATGAGCCTTTGGTTCAA+TGG | + | chr1.3:59475549-59475568 | None:intergenic | 35.0% |
| ! | TTTCCCATTTTATGAGCCTT+TGG | + | chr1.3:59475557-59475576 | None:intergenic | 35.0% |
| !! | ACAGGTTTGTGTTGACTTAT+TGG | + | chr1.3:59476119-59476138 | None:intergenic | 35.0% |
| !! | ATATAACTTGCTCCTCATCT+TGG | + | chr1.3:59475846-59475865 | None:intergenic | 35.0% |
| AAATTGGAAACAGCGCAACA+CGG | - | chr1.3:59475818-59475837 | MS.gene45026:CDS | 40.0% | |
| AATAGGTCTTGCCTAGGTAA+AGG | - | chr1.3:59475908-59475927 | MS.gene45026:intron | 40.0% | |
| AGAGTTCTTCCGAAAAGAAG+AGG | - | chr1.3:59476266-59476285 | MS.gene45026:CDS | 40.0% | |
| AGCGTCGTTATAAAACATGC+AGG | + | chr1.3:59477385-59477404 | None:intergenic | 40.0% | |
| AGTTAGTCAAAGAGATGAGG+AGG | - | chr1.3:59476950-59476969 | MS.gene45026:CDS | 40.0% | |
| CAAGTCCCCAACTATATATG+AGG | - | chr1.3:59475735-59475754 | MS.gene45026:intron | 40.0% | |
| CATATAGCATGACAGAAAGC+AGG | - | chr1.3:59476392-59476411 | MS.gene45026:CDS | 40.0% | |
| CATATCCCTACTTTGAACCT+CGG | + | chr1.3:59475966-59475985 | None:intergenic | 40.0% | |
| CATGGTATGCAACACATCAA+GGG | - | chr1.3:59476702-59476721 | MS.gene45026:CDS | 40.0% | |
| CATTCCGATCAAAGAAGCTA+AGG | + | chr1.3:59474823-59474842 | None:intergenic | 40.0% | |
| CGTCGTTATAAAACATGCAG+GGG | + | chr1.3:59477383-59477402 | None:intergenic | 40.0% | |
| CTTATCAGTTACTCTTGTGC+TGG | + | chr1.3:59476218-59476237 | None:intergenic | 40.0% | |
| GAAATAGAACGGTGTTCTGT+TGG | - | chr1.3:59476646-59476665 | MS.gene45026:CDS | 40.0% | |
| GATAGTGAAGATAGCACATG+TGG | - | chr1.3:59477141-59477160 | MS.gene45026:CDS | 40.0% | |
| GCGTCGTTATAAAACATGCA+GGG | + | chr1.3:59477384-59477403 | None:intergenic | 40.0% | |
| GCTTCCTTAGCTTCTTTGAT+CGG | - | chr1.3:59474816-59474835 | MS.gene45026:CDS | 40.0% | |
| GGATGTATGTATTTGTGCAG+AGG | + | chr1.3:59477471-59477490 | None:intergenic | 40.0% | |
| GTGACAACATAATGAAGTGG+AGG | + | chr1.3:59475477-59475496 | None:intergenic | 40.0% | |
| GTGCTCCTCATATATAGTTG+GGG | + | chr1.3:59475743-59475762 | None:intergenic | 40.0% | |
| TAGTGATAAATTGGGCAGCA+TGG | - | chr1.3:59476756-59476775 | MS.gene45026:CDS | 40.0% | |
| TCCAACAGATCAAAGAGAGT+TGG | + | chr1.3:59477735-59477754 | None:intergenic | 40.0% | |
| TCCATTACATGTAACCTCGT+AGG | + | chr1.3:59476571-59476590 | None:intergenic | 40.0% | |
| TCCTACGAGGTTACATGTAA+TGG | - | chr1.3:59476567-59476586 | MS.gene45026:CDS | 40.0% | |
| TCTGCTGCCTCCTAAAAAAA+GGG | + | chr1.3:59477523-59477542 | None:intergenic | 40.0% | |
| TGAAATCATGCCAATGTCAC+AGG | - | chr1.3:59475015-59475034 | MS.gene45026:CDS | 40.0% | |
| TGAATCTCTCGAACCTTTGA+AGG | + | chr1.3:59475882-59475901 | None:intergenic | 40.0% | |
| TGACTGTGTAAGTGAATGCA+TGG | - | chr1.3:59477818-59477837 | MS.gene45026:intron | 40.0% | |
| TGCAGATCAAGAGTTCTCAA+GGG | + | chr1.3:59475794-59475813 | None:intergenic | 40.0% | |
| TGCCCAATTTATCACTAAGC+AGG | + | chr1.3:59476753-59476772 | None:intergenic | 40.0% | |
| TTACAGCTTGGATCTTCCAT+TGG | + | chr1.3:59477030-59477049 | None:intergenic | 40.0% | |
| TTGCAGATCAAGAGTTCTCA+AGG | + | chr1.3:59475795-59475814 | None:intergenic | 40.0% | |
| ! | AAAGGTTGGTTAGCAGAAGA+AGG | - | chr1.3:59477915-59477934 | MS.gene45026:CDS | 40.0% |
| ! | AAGGTTGGTTAGCAGAAGAA+GGG | - | chr1.3:59477916-59477935 | MS.gene45026:CDS | 40.0% |
| ! | CTAAGCAAGTGATGGAAACA+AGG | - | chr1.3:59476479-59476498 | MS.gene45026:CDS | 40.0% |
| ! | GTTTAGAAGCATGGAAGAAG+AGG | - | chr1.3:59477956-59477975 | MS.gene45026:intron | 40.0% |
| ! | TGAAGCCTTTGAAAATGGCT+TGG | - | chr1.3:59478046-59478065 | MS.gene45026:CDS | 40.0% |
| ! | TGATGATGAAGGGTGTGATA+AGG | - | chr1.3:59475400-59475419 | MS.gene45026:intron | 40.0% |
| ! | TTGTTGAAAGGTGCAAAGCA+TGG | - | chr1.3:59477862-59477881 | MS.gene45026:intron | 40.0% |
| !! | AGAACACCGTTCTATTTCTG+AGG | + | chr1.3:59476644-59476663 | None:intergenic | 40.0% |
| !! | TCTATTTCTGAGGCACATTG+AGG | + | chr1.3:59476634-59476653 | None:intergenic | 40.0% |
| !! | TTTGCTGGTTTGCCTAAGAA+CGG | + | chr1.3:59476071-59476090 | None:intergenic | 40.0% |
| AAGCATGGAAGAAGAGGTGA+TGG | - | chr1.3:59477962-59477981 | MS.gene45026:intron | 45.0% | |
| AAGGACATGAGCACTCCATT+GGG | - | chr1.3:59478002-59478021 | MS.gene45026:intron | 45.0% | |
| AAGTCAAGCCATCTACCCAA+TGG | + | chr1.3:59478020-59478039 | None:intergenic | 45.0% | |
| CAATGCCGAGGTTCAAAGTA+GGG | - | chr1.3:59475958-59475977 | MS.gene45026:intron | 45.0% | |
| CATCAGTGATGAGGAAAGGT+TGG | - | chr1.3:59477901-59477920 | MS.gene45026:CDS | 45.0% | |
| CTCTGCTGCCTCCTAAAAAA+AGG | + | chr1.3:59477524-59477543 | None:intergenic | 45.0% | |
| CTGGTGTTTACCTGTGACAT+TGG | + | chr1.3:59475028-59475047 | None:intergenic | 45.0% | |
| GATGTCGGAGTTTAGAAGCA+TGG | - | chr1.3:59477947-59477966 | MS.gene45026:intron | 45.0% | |
| GCAGGCAAGTTCTTGTTGAA+AGG | - | chr1.3:59477850-59477869 | MS.gene45026:intron | 45.0% | |
| GCATGGTATGCAACACATCA+AGG | - | chr1.3:59476701-59476720 | MS.gene45026:CDS | 45.0% | |
| GCCAACTCTCTTTGATCTGT+TGG | - | chr1.3:59477731-59477750 | MS.gene45026:intron | 45.0% | |
| GTCGACTACTAAGCAAGTGA+TGG | - | chr1.3:59476471-59476490 | MS.gene45026:CDS | 45.0% | |
| GTTCTTAGGCAAACCAGCAA+AGG | - | chr1.3:59476070-59476089 | MS.gene45026:intron | 45.0% | |
| TGAATCCAAACCCATGAGTC+TGG | + | chr1.3:59475441-59475460 | None:intergenic | 45.0% | |
| TGGCATGAATCAGCAACTTC+AGG | - | chr1.3:59476816-59476835 | MS.gene45026:CDS | 45.0% | |
| ! | AGAAGGGTACAAGGAGATGT+CGG | - | chr1.3:59477932-59477951 | MS.gene45026:intron | 45.0% |
| ! | AGGAGCACAATGTCTTCAGT+TGG | - | chr1.3:59475755-59475774 | MS.gene45026:intron | 45.0% |
| ! | CTGATCACGCCTCTTCTTTT+CGG | + | chr1.3:59476278-59476297 | None:intergenic | 45.0% |
| ! | GAAATGGGTTTAGCAGACCT+TGG | + | chr1.3:59475617-59475636 | None:intergenic | 45.0% |
| ! | GGTCGAACTTTCTGAAGAAC+AGG | + | chr1.3:59476137-59476156 | None:intergenic | 45.0% |
| ! | GTTAGCAGAAGAAGGGTACA+AGG | - | chr1.3:59477923-59477942 | MS.gene45026:intron | 45.0% |
| ! | TACTCTTGTGCTGGACCTTT+TGG | + | chr1.3:59476209-59476228 | None:intergenic | 45.0% |
| !! | ATTTCTGAGGCACATTGAGG+TGG | + | chr1.3:59476631-59476650 | None:intergenic | 45.0% |
| !! | TTTCTGAGGCACATTGAGGT+GGG | + | chr1.3:59476630-59476649 | None:intergenic | 45.0% |
| !! | AAAAAATTAAAAGAAAAAAA+TGG | + | chr1.3:59475088-59475107 | None:intergenic | 5.0% |
| !!! | TTTTTTCTTTTAATTTTTTA+TGG | - | chr1.3:59475089-59475108 | MS.gene45026:CDS | 5.0% |
| ACTGATGCCACCATGCATCT+AGG | + | chr1.3:59477888-59477907 | None:intergenic | 50.0% | |
| AGTAGCCAGACTCATGGGTT+TGG | - | chr1.3:59475433-59475452 | MS.gene45026:intron | 50.0% | |
| CAAAGCATGGCCTAGATGCA+TGG | - | chr1.3:59477875-59477894 | MS.gene45026:intron | 50.0% | |
| CAAGGACATGAGCACTCCAT+TGG | - | chr1.3:59478001-59478020 | MS.gene45026:intron | 50.0% | |
| CCAATGCCGAGGTTCAAAGT+AGG | - | chr1.3:59475957-59475976 | MS.gene45026:intron | 50.0% | |
| CCTACTTTGAACCTCGGCAT+TGG | + | chr1.3:59475960-59475979 | None:intergenic | 50.0% | |
| CTGATGCCAGAAAGTTGCCA+AGG | + | chr1.3:59476932-59476951 | None:intergenic | 50.0% | |
| CTGTTGGAGAATCGGAGAAC+TGG | - | chr1.3:59477747-59477766 | MS.gene45026:intron | 50.0% | |
| GTGGCATCAGTGATGAGGAA+AGG | - | chr1.3:59477897-59477916 | MS.gene45026:CDS | 50.0% | |
| TGAGCACTCCATTGGGTAGA+TGG | - | chr1.3:59478009-59478028 | MS.gene45026:intron | 50.0% | |
| TGTAACACCATCCAATGCCG+AGG | - | chr1.3:59475946-59475965 | MS.gene45026:intron | 50.0% | |
| ! | CATGGAAGAAGAGGTGATGG+TGG | - | chr1.3:59477965-59477984 | MS.gene45026:intron | 50.0% |
| ! | CTTTGAACCTCGGCATTGGA+TGG | + | chr1.3:59475956-59475975 | None:intergenic | 50.0% |
| !! | GGCATCTGCTAAGAGCATTG+AGG | - | chr1.3:59475712-59475731 | MS.gene45026:intron | 50.0% |
| !! | GGTGGATGAGCTTGTTAGCA+AGG | - | chr1.3:59477983-59478002 | MS.gene45026:intron | 50.0% |
| !! | GTTTGTTATCGTCCTAGCGC+TGG | + | chr1.3:59476158-59476177 | None:intergenic | 50.0% |
| AGCATGGCCTAGATGCATGG+TGG | - | chr1.3:59477878-59477897 | MS.gene45026:intron | 55.0% | |
| ATGAGTCTGGCTACTAGCCC+TGG | + | chr1.3:59475428-59475447 | None:intergenic | 55.0% | |
| CAGAAAGTTCGACCAGCGCT+AGG | - | chr1.3:59476143-59476162 | MS.gene45026:CDS | 55.0% | |
| CGCAACACGGAACCAAGATG+AGG | - | chr1.3:59475831-59475850 | MS.gene45026:CDS | 55.0% | |
| CGTGATCAGAATGACGCACG+AGG | - | chr1.3:59476289-59476308 | MS.gene45026:CDS | 55.0% | |
| GCATGGTGGCATCAGTGATG+AGG | - | chr1.3:59477892-59477911 | MS.gene45026:CDS | 55.0% | |
| GCCAGAACAGCACCGTTCTT+AGG | - | chr1.3:59476056-59476075 | MS.gene45026:intron | 55.0% | |
| GGAGAATCGGAGAACTGGTG+TGG | - | chr1.3:59477752-59477771 | MS.gene45026:intron | 55.0% | |
| TGAGTCTGGCTACTAGCCCT+GGG | + | chr1.3:59475427-59475446 | None:intergenic | 55.0% | |
| ! | AAGGGTGTGATAAGGCCCCA+GGG | - | chr1.3:59475408-59475427 | MS.gene45026:intron | 55.0% |
| ! | AGGGCTAGTAGCCAGACTCA+TGG | - | chr1.3:59475427-59475446 | MS.gene45026:intron | 55.0% |
| ! | GGGCTAGTAGCCAGACTCAT+GGG | - | chr1.3:59475428-59475447 | MS.gene45026:intron | 55.0% |
| !! | GCCTAAGAACGGTGCTGTTC+TGG | + | chr1.3:59476060-59476079 | None:intergenic | 55.0% |
| GAGTCTGGCTACTAGCCCTG+GGG | + | chr1.3:59475426-59475445 | None:intergenic | 60.0% | |
| ! | GAAGGGTGTGATAAGGCCCC+AGG | - | chr1.3:59475407-59475426 | MS.gene45026:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 59474791 | 59478133 | 59474791 | ID=MS.gene45026 |
| chr1.3 | mRNA | 59474791 | 59478133 | 59474791 | ID=MS.gene45026.t1;Parent=MS.gene45026 |
| chr1.3 | exon | 59478037 | 59478133 | 59478037 | ID=MS.gene45026.t1.exon1;Parent=MS.gene45026.t1 |
| chr1.3 | CDS | 59478037 | 59478133 | 59478037 | ID=cds.MS.gene45026.t1;Parent=MS.gene45026.t1 |
| chr1.3 | exon | 59477888 | 59477937 | 59477888 | ID=MS.gene45026.t1.exon2;Parent=MS.gene45026.t1 |
| chr1.3 | CDS | 59477888 | 59477937 | 59477888 | ID=cds.MS.gene45026.t1;Parent=MS.gene45026.t1 |
| chr1.3 | exon | 59476087 | 59477607 | 59476087 | ID=MS.gene45026.t1.exon3;Parent=MS.gene45026.t1 |
| chr1.3 | CDS | 59476087 | 59477607 | 59476087 | ID=cds.MS.gene45026.t1;Parent=MS.gene45026.t1 |
| chr1.3 | exon | 59475762 | 59475906 | 59475762 | ID=MS.gene45026.t1.exon4;Parent=MS.gene45026.t1 |
| chr1.3 | CDS | 59475762 | 59475906 | 59475762 | ID=cds.MS.gene45026.t1;Parent=MS.gene45026.t1 |
| chr1.3 | exon | 59474791 | 59475392 | 59474791 | ID=MS.gene45026.t1.exon5;Parent=MS.gene45026.t1 |
| chr1.3 | CDS | 59474791 | 59475392 | 59474791 | ID=cds.MS.gene45026.t1;Parent=MS.gene45026.t1 |
| Gene Sequence |
| Protein sequence |
