Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44175.t1 | XP_003591202.3 | 79.1 | 814 | 142 | 8 | 1 | 808 | 3 | 794 | 0.00E+00 | 1121.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44175.t1 | A0A396JRD2 | 79.6 | 770 | 138 | 6 | 45 | 808 | 1 | 757 | 0.0e+00 | 1077.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene44175 | MS.gene050756 | PPI |
| MS.gene005297 | MS.gene44175 | PPI |
| MS.gene44175 | MS.gene054400 | PPI |
| MS.gene072558 | MS.gene44175 | PPI |
| MS.gene45026 | MS.gene44175 | PPI |
| MS.gene44175 | MS.gene40803 | PPI |
| MS.gene44175 | MS.gene005297 | PPI |
| MS.gene44175 | MS.gene050959 | PPI |
| MS.gene40803 | MS.gene44175 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44175.t1 | MTR_1g083850 | 86.825 | 759 | 85 | 5 | 56 | 808 | 1 | 750 | 0.0 | 1286 |
| MS.gene44175.t1 | MTR_7g112030 | 47.573 | 927 | 350 | 27 | 1 | 808 | 1 | 910 | 0.0 | 663 |
| MS.gene44175.t1 | MTR_2g034810 | 28.953 | 936 | 500 | 34 | 8 | 805 | 12 | 920 | 5.49e-71 | 251 |
| MS.gene44175.t1 | MTR_7g082220 | 39.623 | 106 | 55 | 3 | 703 | 805 | 835 | 934 | 8.40e-13 | 72.8 |
| MS.gene44175.t1 | MTR_6g018770 | 28.492 | 179 | 107 | 8 | 639 | 805 | 708 | 877 | 3.67e-12 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44175.t1 | AT3G58650 | 29.118 | 862 | 498 | 30 | 1 | 805 | 4 | 809 | 2.70e-66 | 236 |
| MS.gene44175.t1 | AT5G26910 | 28.311 | 876 | 503 | 31 | 1 | 805 | 4 | 825 | 8.72e-59 | 215 |
| MS.gene44175.t1 | AT5G26910 | 28.311 | 876 | 503 | 31 | 1 | 805 | 4 | 825 | 8.72e-59 | 215 |
| MS.gene44175.t1 | AT5G26910 | 28.082 | 876 | 504 | 30 | 1 | 805 | 4 | 824 | 1.13e-57 | 212 |
| MS.gene44175.t1 | AT5G26910 | 29.482 | 502 | 286 | 18 | 1 | 444 | 4 | 495 | 3.47e-28 | 121 |
| MS.gene44175.t1 | AT3G05750 | 35.220 | 159 | 91 | 3 | 652 | 805 | 543 | 694 | 2.69e-14 | 77.4 |
| MS.gene44175.t1 | AT3G05750 | 35.220 | 159 | 91 | 3 | 652 | 805 | 543 | 694 | 2.69e-14 | 77.4 |
| MS.gene44175.t1 | AT3G05750 | 35.220 | 159 | 91 | 3 | 652 | 805 | 638 | 789 | 2.71e-14 | 77.4 |
| MS.gene44175.t1 | AT3G05750 | 35.220 | 159 | 91 | 3 | 652 | 805 | 646 | 797 | 3.13e-14 | 77.4 |
Find 156 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAACCTGCTTAGTGATAAAT+TGG | 0.140845 | 1.3:+59515021 | MS.gene44175:CDS |
| TCTAAATATGCTGCATTCTT+AGG | 0.165931 | 1.3:-59513963 | None:intergenic |
| TACTCTTGTGCTGGACCTTT+TGG | 0.182095 | 1.3:-59514480 | None:intergenic |
| GACATTGAAGCCTTTGAAAA+TGG | 0.201384 | 1.3:+59516432 | MS.gene44175:CDS |
| TGACTTAAGAGCCATGTTTA+AGG | 0.207080 | 1.3:-59513778 | None:intergenic |
| TCTTGATCTGCAAGAGAAAT+TGG | 0.213960 | 1.3:+59514076 | MS.gene44175:CDS |
| TGAAGTTGATTTACCTTTGC+TGG | 0.221523 | 1.3:-59514357 | None:intergenic |
| TGAACCAAAGGCTCATAAAA+TGG | 0.230963 | 1.3:+59513824 | MS.gene44175:CDS |
| ATCACTACTAATTGATAATA+AGG | 0.265224 | 1.3:-59513652 | None:intergenic |
| ACAGGTTTGTGTTGACTTAT+TGG | 0.265851 | 1.3:-59514390 | None:intergenic |
| GCCTAAGAACGGTGCTGTTC+TGG | 0.287283 | 1.3:-59514331 | None:intergenic |
| TGTTGAATTTGAATGGAAAT+AGG | 0.295796 | 1.3:+59514258 | MS.gene44175:CDS |
| TTGTGATAAAAGTGTTTCTT+TGG | 0.305866 | 1.3:-59513125 | None:intergenic |
| TTCGGAAGAACTCTTTCTTT+TGG | 0.311731 | 1.3:-59514531 | None:intergenic |
| TACCTATTTGATAGATGAAT+TGG | 0.313922 | 1.3:+59516479 | MS.gene44175:CDS |
| AACCAATTCATCTTATATTC+AGG | 0.323610 | 1.3:-59515994 | None:intergenic |
| ATGAGTCTGGCTACTAGCCC+TGG | 0.328479 | 1.3:-59513699 | None:intergenic |
| AAAAGAATCAACATCAATTC+TGG | 0.330223 | 1.3:-59514777 | None:intergenic |
| CGAGAGATTCAGAAAATAAT+AGG | 0.330370 | 1.3:+59514165 | MS.gene44175:CDS |
| AAATAATTACCAGGTAAGTT+AGG | 0.347260 | 1.3:-59513149 | None:intergenic |
| TGAATCTCTCGAACCTTTGA+AGG | 0.348909 | 1.3:-59514153 | None:intergenic |
| CACCTGAATATAAGATGAAT+TGG | 0.375181 | 1.3:+59515992 | MS.gene44175:CDS |
| TAAGAATGCAGCATATTTAG+AGG | 0.380059 | 1.3:+59513965 | MS.gene44175:CDS |
| TTTATGAGCCTTTGGTTCAA+TGG | 0.380731 | 1.3:-59513820 | None:intergenic |
| GCCAACTCTCTTTGATCTGT+TGG | 0.381202 | 1.3:+59516122 | MS.gene44175:CDS |
| CTTATCAGTTACTCTTGTGC+TGG | 0.385816 | 1.3:-59514489 | None:intergenic |
| ACTCAGCAATGTAGAATTGA+TGG | 0.386018 | 1.3:+59516074 | MS.gene44175:CDS |
| AGGGATATGTTGAATTTGAA+TGG | 0.390361 | 1.3:+59514251 | MS.gene44175:CDS |
| ATGCAAGATGAAGAAGTATA+TGG | 0.393979 | 1.3:+59515946 | MS.gene44175:CDS |
| AACCAATTCATCTATCAAAT+AGG | 0.394619 | 1.3:-59516481 | None:intergenic |
| TGGCATGAATCAGCAACTTC+AGG | 0.397356 | 1.3:+59515090 | MS.gene44175:CDS |
| TGAGCACTCCATTGGGTAGA+TGG | 0.402874 | 1.3:+59516400 | MS.gene44175:CDS |
| TCTTTGATCTGTTGGAGAAT+CGG | 0.419385 | 1.3:+59516130 | MS.gene44175:CDS |
| GGTCGAACTTTCTGAAGAAC+AGG | 0.421894 | 1.3:-59514408 | None:intergenic |
| TGTGCTCCTCATATATAGTT+GGG | 0.423119 | 1.3:-59514015 | None:intergenic |
| ATGAATTGGTTTCTGATTTG+TGG | 0.425319 | 1.3:+59516493 | MS.gene44175:CDS |
| TGAGTCTGGCTACTAGCCCT+GGG | 0.426455 | 1.3:-59513698 | None:intergenic |
| TCAAATTATGATACAATGCT+TGG | 0.428269 | 1.3:+59515070 | MS.gene44175:CDS |
| AGTAGCCAGACTCATGGGTT+TGG | 0.431579 | 1.3:+59513707 | MS.gene44175:CDS |
| TCCTACGAGGTTACATGTAA+TGG | 0.436748 | 1.3:+59514841 | MS.gene44175:CDS |
| ATATAACTTGCTCCTCATCT+TGG | 0.439222 | 1.3:-59514117 | None:intergenic |
| TACAAAATCATCAAGGATGA+TGG | 0.444399 | 1.3:+59516029 | MS.gene44175:CDS |
| AAAGGTTGGTTAGCAGAAGA+AGG | 0.447131 | 1.3:+59516306 | MS.gene44175:CDS |
| TTGTTATGAGTAACTGAAAT+GGG | 0.447444 | 1.3:-59513903 | None:intergenic |
| GAACCAAAGGCTCATAAAAT+GGG | 0.450651 | 1.3:+59513825 | MS.gene44175:CDS |
| TGAATCCAAACCCATGAGTC+TGG | 0.452723 | 1.3:-59513712 | None:intergenic |
| TGAAGCCTTTGAAAATGGCT+TGG | 0.457955 | 1.3:+59516437 | MS.gene44175:CDS |
| GCCAGAACAGCACCGTTCTT+AGG | 0.459790 | 1.3:+59514330 | MS.gene44175:CDS |
| TTACAGCTTGGATCTTCCAT+TGG | 0.460975 | 1.3:-59515301 | None:intergenic |
| TTTCATCAGCAAAAGTAACT+TGG | 0.461060 | 1.3:+59515393 | MS.gene44175:CDS |
| ACTGATGCCACCATGCATCT+AGG | 0.461328 | 1.3:-59516276 | None:intergenic |
| ACAATTGTTTCAGATAAAGA+TGG | 0.464516 | 1.3:+59513578 | MS.gene44175:intron |
| AAGAATACTCTAAGCTCAAA+AGG | 0.473263 | 1.3:+59516175 | MS.gene44175:CDS |
| GAAGGGTGTGATAAGGCCCC+AGG | 0.473540 | 1.3:+59513681 | MS.gene44175:CDS |
| AAAATGAAACTTTGTCTCCA+AGG | 0.473878 | 1.3:+59513871 | MS.gene44175:CDS |
| GTTTGTTATCGTCCTAGCGC+TGG | 0.478195 | 1.3:-59514429 | None:intergenic |
| CAAGGACATGAGCACTCCAT+TGG | 0.478271 | 1.3:+59516392 | MS.gene44175:CDS |
| GCTTCCTTAGCTTCTTTGAT+CGG | 0.480496 | 1.3:+59513090 | MS.gene44175:CDS |
| TTTCAATGTTTCCCTTTGCA+TGG | 0.487929 | 1.3:-59513271 | None:intergenic |
| TTTGTTATGAGTAACTGAAA+TGG | 0.489794 | 1.3:-59513904 | None:intergenic |
| GAAATAGAACGGTGTTCTGT+TGG | 0.491216 | 1.3:+59514920 | MS.gene44175:CDS |
| TTGTGCTCCTCATATATAGT+TGG | 0.491806 | 1.3:-59514016 | None:intergenic |
| TATCACAATCCTAACTTACC+TGG | 0.492317 | 1.3:+59513140 | MS.gene44175:CDS |
| ATTCTAACATTGAATCCAAA+AGG | 0.492686 | 1.3:+59514465 | MS.gene44175:CDS |
| ATATACTTCTTCATCTTGCA+TGG | 0.495644 | 1.3:-59515944 | None:intergenic |
| ATTTCTGAGGCACATTGAGG+TGG | 0.497061 | 1.3:-59514902 | None:intergenic |
| AAGAGTAACTGATAAGCAAA+AGG | 0.502215 | 1.3:+59514496 | MS.gene44175:CDS |
| CTGTTGGAGAATCGGAGAAC+TGG | 0.510605 | 1.3:+59516138 | MS.gene44175:CDS |
| TGCCCAATTTATCACTAAGC+AGG | 0.510690 | 1.3:-59515024 | None:intergenic |
| AAGTCTACTTCAACCTTCAA+AGG | 0.512513 | 1.3:+59514140 | MS.gene44175:CDS |
| AATAGGTCTTGCCTAGGTAA+AGG | 0.513285 | 1.3:+59514182 | MS.gene44175:CDS |
| CTTTGAACCTCGGCATTGGA+TGG | 0.515084 | 1.3:-59514227 | None:intergenic |
| CCTACTTTGAACCTCGGCAT+TGG | 0.515663 | 1.3:-59514231 | None:intergenic |
| TGAAATCATGCCAATGTCAC+AGG | 0.515734 | 1.3:+59513289 | MS.gene44175:CDS |
| GCATGGTATGCAACACATCA+AGG | 0.515846 | 1.3:+59514975 | MS.gene44175:CDS |
| CAGAAAGTTCGACCAGCGCT+AGG | 0.516699 | 1.3:+59514417 | MS.gene44175:CDS |
| CATTCCGATCAAAGAAGCTA+AGG | 0.517044 | 1.3:-59513094 | None:intergenic |
| GATGTTTCAAACCATGCAAA+GGG | 0.520211 | 1.3:+59513260 | MS.gene44175:intron |
| CTGGTGTTTACCTGTGACAT+TGG | 0.521249 | 1.3:-59513299 | None:intergenic |
| GTTAGCAGAAGAAGGGTACA+AGG | 0.523262 | 1.3:+59516314 | MS.gene44175:CDS |
| TTGCAGATCAAGAGTTCTCA+AGG | 0.524434 | 1.3:-59514066 | None:intergenic |
| AAGCATGGAAGAAGAGGTGA+TGG | 0.525379 | 1.3:+59516353 | MS.gene44175:CDS |
| CATATAGCATGACAGAAAGC+AGG | 0.529033 | 1.3:+59514666 | MS.gene44175:CDS |
| GGGCTAGTAGCCAGACTCAT+GGG | 0.531216 | 1.3:+59513702 | MS.gene44175:CDS |
| AATGGAGAAAAGAAGTTACA+AGG | 0.533794 | 1.3:+59513064 | None:intergenic |
| CAAGTCCCCAACTATATATG+AGG | 0.533920 | 1.3:+59514009 | MS.gene44175:CDS |
| GAAATGGGTTTAGCAGACCT+TGG | 0.538176 | 1.3:-59513888 | None:intergenic |
| GATGGAACTTGAATATGTAA+AGG | 0.538230 | 1.3:+59516047 | MS.gene44175:CDS |
| GATGTCGGAGTTTAGAAGCA+TGG | 0.546019 | 1.3:+59516338 | MS.gene44175:CDS |
| AAGGACATGAGCACTCCATT+GGG | 0.547496 | 1.3:+59516393 | MS.gene44175:CDS |
| CATCAGTGATGAGGAAAGGT+TGG | 0.550514 | 1.3:+59516292 | MS.gene44175:CDS |
| GCAGGCAAGTTCTTGTTGAA+AGG | 0.551031 | 1.3:+59516241 | MS.gene44175:CDS |
| GAAAATAATAGGTCTTGCCT+AGG | 0.551230 | 1.3:+59514176 | MS.gene44175:CDS |
| TCTATTTCTGAGGCACATTG+AGG | 0.551487 | 1.3:-59514905 | None:intergenic |
| TTGTGATACCATTGAACCAA+AGG | 0.551569 | 1.3:+59513812 | MS.gene44175:CDS |
| CAATGCCGAGGTTCAAAGTA+GGG | 0.554685 | 1.3:+59514232 | MS.gene44175:CDS |
| CCAATGCCGAGGTTCAAAGT+AGG | 0.555210 | 1.3:+59514231 | MS.gene44175:CDS |
| TATAAAATGTAATGTTACAA+TGG | 0.555302 | 1.3:+59514622 | MS.gene44175:CDS |
| AGGAGCACAATGTCTTCAGT+TGG | 0.557248 | 1.3:+59514029 | MS.gene44175:CDS |
| CATGGAAGAAGAGGTGATGG+TGG | 0.557606 | 1.3:+59516356 | MS.gene44175:CDS |
| AGGGCTAGTAGCCAGACTCA+TGG | 0.557813 | 1.3:+59513701 | MS.gene44175:CDS |
| ATGGAGAAAAGAAGTTACAA+GGG | 0.561403 | 1.3:+59513065 | MS.gene44175:CDS |
| GTTTAGAAGCATGGAAGAAG+AGG | 0.561464 | 1.3:+59516347 | MS.gene44175:CDS |
| TTACATTTACATCTCCATTG+AGG | 0.562743 | 1.3:+59514702 | MS.gene44175:CDS |
| TTTGCTGGTTTGCCTAAGAA+CGG | 0.562748 | 1.3:-59514342 | None:intergenic |
| AGAGTTCTTCCGAAAAGAAG+AGG | 0.565687 | 1.3:+59514540 | MS.gene44175:CDS |
| CTAAGCAAGTGATGGAAACA+AGG | 0.566796 | 1.3:+59514753 | MS.gene44175:CDS |
| TCCAACAGATCAAAGAGAGT+TGG | 0.567522 | 1.3:-59516123 | None:intergenic |
| TGATGATGAAGGGTGTGATA+AGG | 0.567960 | 1.3:+59513674 | MS.gene44175:CDS |
| ATTAGTAGTGATGATGATGA+AGG | 0.568918 | 1.3:+59513663 | MS.gene44175:CDS |
| AGAAGGGTACAAGGAGATGT+CGG | 0.578044 | 1.3:+59516323 | MS.gene44175:CDS |
| TCTTAGGCTTCATACTAACA+TGG | 0.580559 | 1.3:-59513947 | None:intergenic |
| TAGTGATAAATTGGGCAGCA+TGG | 0.582742 | 1.3:+59515030 | MS.gene44175:CDS |
| AGAACACCGTTCTATTTCTG+AGG | 0.582791 | 1.3:-59514915 | None:intergenic |
| GTCGACTACTAAGCAAGTGA+TGG | 0.583625 | 1.3:+59514745 | MS.gene44175:CDS |
| AACCTGCTTAGTGATAAATT+GGG | 0.585492 | 1.3:+59515022 | MS.gene44175:CDS |
| TCACTTAGATTCCTTAAACA+TGG | 0.585838 | 1.3:+59513767 | MS.gene44175:CDS |
| TCTGTAGATATCAGAACCAA+TGG | 0.586401 | 1.3:+59515285 | MS.gene44175:intron |
| TCACTACTTGCAATATCACT+AGG | 0.586974 | 1.3:-59513618 | None:intergenic |
| TTGTTGAAAGGTGCAAAGCA+TGG | 0.588420 | 1.3:+59516253 | MS.gene44175:CDS |
| AATGCATGGAATTAAGATGC+AGG | 0.588770 | 1.3:+59516223 | MS.gene44175:CDS |
| AGATGTTTCAAACCATGCAA+AGG | 0.589368 | 1.3:+59513259 | MS.gene44175:intron |
| TTTCTGAGGCACATTGAGGT+GGG | 0.592064 | 1.3:-59514901 | None:intergenic |
| AAAGCTCTACAAAATCATCA+AGG | 0.594973 | 1.3:+59516022 | MS.gene44175:CDS |
| TAAGTGACAACATAATGAAG+TGG | 0.601855 | 1.3:-59513751 | None:intergenic |
| CATATCCCTACTTTGAACCT+CGG | 0.606736 | 1.3:-59514237 | None:intergenic |
| AAGTCAAGCCATCTACCCAA+TGG | 0.609117 | 1.3:-59516408 | None:intergenic |
| AAGGTTGGTTAGCAGAAGAA+GGG | 0.610456 | 1.3:+59516307 | MS.gene44175:CDS |
| GTGCTCCTCATATATAGTTG+GGG | 0.610822 | 1.3:-59514014 | None:intergenic |
| CGCAACACGGAACCAAGATG+AGG | 0.611483 | 1.3:+59514105 | MS.gene44175:CDS |
| AGAAGACAGATTTAACAGCA+TGG | 0.621284 | 1.3:+59514958 | MS.gene44175:CDS |
| GTGACAACATAATGAAGTGG+AGG | 0.623561 | 1.3:-59513748 | None:intergenic |
| GTTCTTAGGCAAACCAGCAA+AGG | 0.627546 | 1.3:+59514344 | MS.gene44175:CDS |
| CATGGTATGCAACACATCAA+GGG | 0.628447 | 1.3:+59514976 | MS.gene44175:CDS |
| CAAAGCATGGCCTAGATGCA+TGG | 0.630631 | 1.3:+59516266 | MS.gene44175:CDS |
| TGACTGTGTAAGTGAATGCA+TGG | 0.630868 | 1.3:+59516209 | MS.gene44175:CDS |
| GGTGGATGAGCTTGTTAGCA+AGG | 0.631696 | 1.3:+59516374 | MS.gene44175:CDS |
| CAGATAAAGATGGATGACAA+TGG | 0.635008 | 1.3:+59513588 | MS.gene44175:intron |
| GATAGTGAAGATAGCACATG+TGG | 0.644975 | 1.3:+59515415 | MS.gene44175:CDS |
| ATATAGCATGACAGAAAGCA+GGG | 0.649280 | 1.3:+59514667 | MS.gene44175:CDS |
| TGCAGATCAAGAGTTCTCAA+GGG | 0.654144 | 1.3:-59514065 | None:intergenic |
| GAGTCTGGCTACTAGCCCTG+GGG | 0.654903 | 1.3:-59513697 | None:intergenic |
| AATGTGCCTCAGAAATAGAA+CGG | 0.658499 | 1.3:+59514909 | MS.gene44175:CDS |
| AAGGGTGTGATAAGGCCCCA+GGG | 0.660078 | 1.3:+59513682 | MS.gene44175:CDS |
| TCCATTACATGTAACCTCGT+AGG | 0.664556 | 1.3:-59514842 | None:intergenic |
| CGTGATCAGAATGACGCACG+AGG | 0.670720 | 1.3:+59514563 | MS.gene44175:CDS |
| GGCATCTGCTAAGAGCATTG+AGG | 0.678302 | 1.3:+59513986 | MS.gene44175:CDS |
| GCATGGTGGCATCAGTGATG+AGG | 0.679121 | 1.3:+59516283 | MS.gene44175:CDS |
| TTAGTAGTGATGATGATGAA+GGG | 0.685067 | 1.3:+59513664 | MS.gene44175:CDS |
| GTGGCATCAGTGATGAGGAA+AGG | 0.685249 | 1.3:+59516288 | MS.gene44175:CDS |
| GGAGAATCGGAGAACTGGTG+TGG | 0.691183 | 1.3:+59516143 | MS.gene44175:CDS |
| TGTAACACCATCCAATGCCG+AGG | 0.692381 | 1.3:+59514220 | MS.gene44175:CDS |
| AAATTGGAAACAGCGCAACA+CGG | 0.695462 | 1.3:+59514092 | MS.gene44175:CDS |
| AGCATGGCCTAGATGCATGG+TGG | 0.715972 | 1.3:+59516269 | MS.gene44175:CDS |
| AATTATCATTATCTCCTACG+AGG | 0.717855 | 1.3:+59514828 | MS.gene44175:CDS |
| AGGACGATAACAAACAAATG+CGG | 0.767520 | 1.3:+59514437 | MS.gene44175:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGTAATAATAATAAGAA+AGG | - | chr1.3:59513564-59513583 | None:intergenic | 10.0% |
| !! | ATTGTAATAATAATAAGAAA+GGG | - | chr1.3:59513563-59513582 | None:intergenic | 10.0% |
| !! | TATAAAATGTAATGTTACAA+TGG | + | chr1.3:59514622-59514641 | MS.gene44175:CDS | 15.0% |
| !! | AAGAAAAAAATGGTTAAACT+AGG | - | chr1.3:59513352-59513371 | None:intergenic | 20.0% |
| !! | TAAACATAGTATATTATCCT+TGG | + | chr1.3:59515186-59515205 | MS.gene44175:intron | 20.0% |
| !!! | ATCACTACTAATTGATAATA+AGG | - | chr1.3:59513655-59513674 | None:intergenic | 20.0% |
| !!! | GAACAAGCATTAATATTTTA+TGG | - | chr1.3:59515883-59515902 | None:intergenic | 20.0% |
| !!! | TCATATATAACCCTTTTTTT+AGG | + | chr1.3:59515901-59515920 | MS.gene44175:intron | 20.0% |
| !!! | TTACTCATTTTCATTTGTTA+TGG | + | chr1.3:59515140-59515159 | MS.gene44175:intron | 20.0% |
| ! | AAAAGAATCAACATCAATTC+TGG | - | chr1.3:59514780-59514799 | None:intergenic | 25.0% |
| ! | AAAGACTAGAAATAATTACC+AGG | - | chr1.3:59513161-59513180 | None:intergenic | 25.0% |
| ! | AAATAATTACCAGGTAAGTT+AGG | - | chr1.3:59513152-59513171 | None:intergenic | 25.0% |
| ! | AACCAATTCATCTATCAAAT+AGG | - | chr1.3:59516484-59516503 | None:intergenic | 25.0% |
| ! | AACCAATTCATCTTATATTC+AGG | - | chr1.3:59515997-59516016 | None:intergenic | 25.0% |
| ! | ACAATTGTTTCAGATAAAGA+TGG | + | chr1.3:59513578-59513597 | MS.gene44175:intron | 25.0% |
| ! | ACTTCAAAGTTAAGCAAAAT+TGG | - | chr1.3:59515710-59515729 | None:intergenic | 25.0% |
| ! | ATTCTAACATTGAATCCAAA+AGG | + | chr1.3:59514465-59514484 | MS.gene44175:CDS | 25.0% |
| ! | GAGCAAAAAATATTCAGAAT+AGG | - | chr1.3:59513229-59513248 | None:intergenic | 25.0% |
| ! | GTCTTAACAAAATGTCATTA+GGG | - | chr1.3:59513417-59513436 | None:intergenic | 25.0% |
| ! | TACCTATTTGATAGATGAAT+TGG | + | chr1.3:59516479-59516498 | MS.gene44175:CDS | 25.0% |
| ! | TCAAACCAGAAAAATTGTAA+TGG | + | chr1.3:59514308-59514327 | MS.gene44175:CDS | 25.0% |
| ! | TCAAATTATGATACAATGCT+TGG | + | chr1.3:59515070-59515089 | MS.gene44175:CDS | 25.0% |
| ! | TGTAACAACAAAAATGAAAG+CGG | + | chr1.3:59515319-59515338 | MS.gene44175:CDS | 25.0% |
| ! | TGTCTTAACAAAATGTCATT+AGG | - | chr1.3:59513418-59513437 | None:intergenic | 25.0% |
| ! | TGTTGAATTTGAATGGAAAT+AGG | + | chr1.3:59514258-59514277 | MS.gene44175:CDS | 25.0% |
| ! | TTAAACTAGGAAACTAAGAA+AGG | - | chr1.3:59513339-59513358 | None:intergenic | 25.0% |
| ! | TTGTTATGAGTAACTGAAAT+GGG | - | chr1.3:59513906-59513925 | None:intergenic | 25.0% |
| !! | CTACATAAAACTTCCTTTTT+AGG | + | chr1.3:59513499-59513518 | MS.gene44175:intron | 25.0% |
| !! | GGAGATAATGATAATTTTTC+AGG | - | chr1.3:59514824-59514843 | None:intergenic | 25.0% |
| !! | TTTGTTATGAGTAACTGAAA+TGG | - | chr1.3:59513907-59513926 | None:intergenic | 25.0% |
| !!! | TATATAACCCTTTTTTTAGG+AGG | + | chr1.3:59515904-59515923 | MS.gene44175:intron | 25.0% |
| !!! | TTGTGATAAAAGTGTTTCTT+TGG | - | chr1.3:59513128-59513147 | None:intergenic | 25.0% |
| AAAATGAAACTTTGTCTCCA+AGG | + | chr1.3:59513871-59513890 | MS.gene44175:CDS | 30.0% | |
| AAAGCTCTACAAAATCATCA+AGG | + | chr1.3:59516022-59516041 | MS.gene44175:CDS | 30.0% | |
| AAAGGTTGAAAAAATCACAC+TGG | - | chr1.3:59513321-59513340 | None:intergenic | 30.0% | |
| AACCTGCTTAGTGATAAATT+GGG | + | chr1.3:59515022-59515041 | MS.gene44175:CDS | 30.0% | |
| AAGAATACTCTAAGCTCAAA+AGG | + | chr1.3:59516175-59516194 | MS.gene44175:CDS | 30.0% | |
| AAGAGTAACTGATAAGCAAA+AGG | + | chr1.3:59514496-59514515 | MS.gene44175:CDS | 30.0% | |
| AATTATCATTATCTCCTACG+AGG | + | chr1.3:59514828-59514847 | MS.gene44175:CDS | 30.0% | |
| AGGGATATGTTGAATTTGAA+TGG | + | chr1.3:59514251-59514270 | MS.gene44175:CDS | 30.0% | |
| ATATACTTCTTCATCTTGCA+TGG | - | chr1.3:59515947-59515966 | None:intergenic | 30.0% | |
| ATATCTACAGAAGAGAAGAA+TGG | - | chr1.3:59515276-59515295 | None:intergenic | 30.0% | |
| ATGGAGAAAAGAAGTTACAA+GGG | + | chr1.3:59513065-59513084 | MS.gene44175:CDS | 30.0% | |
| CACCTGAATATAAGATGAAT+TGG | + | chr1.3:59515992-59516011 | MS.gene44175:CDS | 30.0% | |
| CGAGAGATTCAGAAAATAAT+AGG | + | chr1.3:59514165-59514184 | MS.gene44175:CDS | 30.0% | |
| GATGGAACTTGAATATGTAA+AGG | + | chr1.3:59516047-59516066 | MS.gene44175:CDS | 30.0% | |
| GCAAAATTATTCTTATCAGC+TGG | + | chr1.3:59515684-59515703 | MS.gene44175:intron | 30.0% | |
| TAAGAATGCAGCATATTTAG+AGG | + | chr1.3:59513965-59513984 | MS.gene44175:CDS | 30.0% | |
| TAAGTGACAACATAATGAAG+TGG | - | chr1.3:59513754-59513773 | None:intergenic | 30.0% | |
| TACAAAATCATCAAGGATGA+TGG | + | chr1.3:59516029-59516048 | MS.gene44175:CDS | 30.0% | |
| TCACTTAGATTCCTTAAACA+TGG | + | chr1.3:59513767-59513786 | MS.gene44175:CDS | 30.0% | |
| TCTAAATATGCTGCATTCTT+AGG | - | chr1.3:59513966-59513985 | None:intergenic | 30.0% | |
| TTACATTTACATCTCCATTG+AGG | + | chr1.3:59514702-59514721 | MS.gene44175:CDS | 30.0% | |
| TTTCATCAGCAAAAGTAACT+TGG | + | chr1.3:59515393-59515412 | MS.gene44175:CDS | 30.0% | |
| ! | ACTTGTTAAGAAGCCTAAAA+AGG | - | chr1.3:59513515-59513534 | None:intergenic | 30.0% |
| ! | ATACTAACATGGCTTTTGAT+AGG | - | chr1.3:59513939-59513958 | None:intergenic | 30.0% |
| ! | ATGAATTGGTTTCTGATTTG+TGG | + | chr1.3:59516493-59516512 | MS.gene44175:CDS | 30.0% |
| ! | ATGCAAGATGAAGAAGTATA+TGG | + | chr1.3:59515946-59515965 | MS.gene44175:CDS | 30.0% |
| ! | ATTAGTAGTGATGATGATGA+AGG | + | chr1.3:59513663-59513682 | MS.gene44175:CDS | 30.0% |
| ! | TGAGATATGTTTTTCCTCAA+TGG | - | chr1.3:59514719-59514738 | None:intergenic | 30.0% |
| ! | TTAGTAGTGATGATGATGAA+GGG | + | chr1.3:59513664-59513683 | MS.gene44175:CDS | 30.0% |
| ! | TTCTTTTCATCACGTTGATA+AGG | + | chr1.3:59514793-59514812 | MS.gene44175:CDS | 30.0% |
| !! | AAATTCCAAGCCATTTTCAA+AGG | - | chr1.3:59516445-59516464 | None:intergenic | 30.0% |
| !!! | AAGTTACTTTTGCTGATGAA+AGG | - | chr1.3:59515394-59515413 | None:intergenic | 30.0% |
| !!! | TCATTTTTGTTGTTACAGCT+TGG | - | chr1.3:59515316-59515335 | None:intergenic | 30.0% |
| AAGTCTACTTCAACCTTCAA+AGG | + | chr1.3:59514140-59514159 | MS.gene44175:CDS | 35.0% | |
| AATGCATGGAATTAAGATGC+AGG | + | chr1.3:59516223-59516242 | MS.gene44175:CDS | 35.0% | |
| AATGTGCCTCAGAAATAGAA+CGG | + | chr1.3:59514909-59514928 | MS.gene44175:CDS | 35.0% | |
| ACTCAGCAATGTAGAATTGA+TGG | + | chr1.3:59516074-59516093 | MS.gene44175:CDS | 35.0% | |
| AGAAGACAGATTTAACAGCA+TGG | + | chr1.3:59514958-59514977 | MS.gene44175:CDS | 35.0% | |
| AGATGTTTCAAACCATGCAA+AGG | + | chr1.3:59513259-59513278 | MS.gene44175:intron | 35.0% | |
| AGGACGATAACAAACAAATG+CGG | + | chr1.3:59514437-59514456 | MS.gene44175:CDS | 35.0% | |
| ATATAGCATGACAGAAAGCA+GGG | + | chr1.3:59514667-59514686 | MS.gene44175:CDS | 35.0% | |
| ATCAGTTAGTCAAAGAGATG+AGG | + | chr1.3:59515221-59515240 | MS.gene44175:intron | 35.0% | |
| CAGATAAAGATGGATGACAA+TGG | + | chr1.3:59513588-59513607 | MS.gene44175:intron | 35.0% | |
| GAAAATAATAGGTCTTGCCT+AGG | + | chr1.3:59514176-59514195 | MS.gene44175:CDS | 35.0% | |
| GAACCAAAGGCTCATAAAAT+GGG | + | chr1.3:59513825-59513844 | MS.gene44175:CDS | 35.0% | |
| GAACCTGCTTAGTGATAAAT+TGG | + | chr1.3:59515021-59515040 | MS.gene44175:CDS | 35.0% | |
| GATGTTTCAAACCATGCAAA+GGG | + | chr1.3:59513260-59513279 | MS.gene44175:intron | 35.0% | |
| TATCACAATCCTAACTTACC+TGG | + | chr1.3:59513140-59513159 | MS.gene44175:CDS | 35.0% | |
| TATTATCCTTGGCAACTTTC+TGG | + | chr1.3:59515197-59515216 | MS.gene44175:intron | 35.0% | |
| TCACTACTTGCAATATCACT+AGG | - | chr1.3:59513621-59513640 | None:intergenic | 35.0% | |
| TCGTGCTAACAAATTCTGTA+AGG | - | chr1.3:59513540-59513559 | None:intergenic | 35.0% | |
| TCTCAAGGTTATTCAAAGCA+TGG | - | chr1.3:59515658-59515677 | None:intergenic | 35.0% | |
| TCTGTAGATATCAGAACCAA+TGG | + | chr1.3:59515285-59515304 | MS.gene44175:intron | 35.0% | |
| TCTTAGGCTTCATACTAACA+TGG | - | chr1.3:59513950-59513969 | None:intergenic | 35.0% | |
| TCTTGATCTGCAAGAGAAAT+TGG | + | chr1.3:59514076-59514095 | MS.gene44175:CDS | 35.0% | |
| TCTTTGATCTGTTGGAGAAT+CGG | + | chr1.3:59516130-59516149 | MS.gene44175:CDS | 35.0% | |
| TGAACCAAAGGCTCATAAAA+TGG | + | chr1.3:59513824-59513843 | MS.gene44175:CDS | 35.0% | |
| TGACTTAAGAGCCATGTTTA+AGG | - | chr1.3:59513781-59513800 | None:intergenic | 35.0% | |
| TGTGCTCCTCATATATAGTT+GGG | - | chr1.3:59514018-59514037 | None:intergenic | 35.0% | |
| TTGTGATACCATTGAACCAA+AGG | + | chr1.3:59513812-59513831 | MS.gene44175:CDS | 35.0% | |
| TTGTGCTCCTCATATATAGT+TGG | - | chr1.3:59514019-59514038 | None:intergenic | 35.0% | |
| TTTCAATGTTTCCCTTTGCA+TGG | - | chr1.3:59513274-59513293 | None:intergenic | 35.0% | |
| ! | AAGCAGATTTTCCTTTACCT+AGG | - | chr1.3:59514196-59514215 | None:intergenic | 35.0% |
| ! | CAGAAGTGTAAAGACAATCA+AGG | - | chr1.3:59515453-59515472 | None:intergenic | 35.0% |
| ! | GACATTGAAGCCTTTGAAAA+TGG | + | chr1.3:59516432-59516451 | MS.gene44175:CDS | 35.0% |
| ! | TAATTTTGCAGCATGTCTCA+AGG | - | chr1.3:59515673-59515692 | None:intergenic | 35.0% |
| ! | TCTGGCCATTACAATTTTTC+TGG | - | chr1.3:59514316-59514335 | None:intergenic | 35.0% |
| ! | TGAAGTTGATTTACCTTTGC+TGG | - | chr1.3:59514360-59514379 | None:intergenic | 35.0% |
| ! | TTCGGAAGAACTCTTTCTTT+TGG | - | chr1.3:59514534-59514553 | None:intergenic | 35.0% |
| ! | TTTATGAGCCTTTGGTTCAA+TGG | - | chr1.3:59513823-59513842 | None:intergenic | 35.0% |
| ! | TTTCCCATTTTATGAGCCTT+TGG | - | chr1.3:59513831-59513850 | None:intergenic | 35.0% |
| !! | ACAGGTTTGTGTTGACTTAT+TGG | - | chr1.3:59514393-59514412 | None:intergenic | 35.0% |
| !! | ATATAACTTGCTCCTCATCT+TGG | - | chr1.3:59514120-59514139 | None:intergenic | 35.0% |
| AAATTGGAAACAGCGCAACA+CGG | + | chr1.3:59514092-59514111 | MS.gene44175:CDS | 40.0% | |
| AATAGGTCTTGCCTAGGTAA+AGG | + | chr1.3:59514182-59514201 | MS.gene44175:CDS | 40.0% | |
| AGAGTTCTTCCGAAAAGAAG+AGG | + | chr1.3:59514540-59514559 | MS.gene44175:CDS | 40.0% | |
| AGCGTCGTTATAAAACATGC+AGG | - | chr1.3:59515776-59515795 | None:intergenic | 40.0% | |
| AGTTAGTCAAAGAGATGAGG+AGG | + | chr1.3:59515224-59515243 | MS.gene44175:intron | 40.0% | |
| CAAGTCCCCAACTATATATG+AGG | + | chr1.3:59514009-59514028 | MS.gene44175:CDS | 40.0% | |
| CATATAGCATGACAGAAAGC+AGG | + | chr1.3:59514666-59514685 | MS.gene44175:CDS | 40.0% | |
| CATATCCCTACTTTGAACCT+CGG | - | chr1.3:59514240-59514259 | None:intergenic | 40.0% | |
| CATGGTATGCAACACATCAA+GGG | + | chr1.3:59514976-59514995 | MS.gene44175:CDS | 40.0% | |
| CATTCCGATCAAAGAAGCTA+AGG | - | chr1.3:59513097-59513116 | None:intergenic | 40.0% | |
| CGTCGTTATAAAACATGCAG+GGG | - | chr1.3:59515774-59515793 | None:intergenic | 40.0% | |
| CTTATCAGTTACTCTTGTGC+TGG | - | chr1.3:59514492-59514511 | None:intergenic | 40.0% | |
| GAAATAGAACGGTGTTCTGT+TGG | + | chr1.3:59514920-59514939 | MS.gene44175:CDS | 40.0% | |
| GATAGTGAAGATAGCACATG+TGG | + | chr1.3:59515415-59515434 | MS.gene44175:CDS | 40.0% | |
| GCGTCGTTATAAAACATGCA+GGG | - | chr1.3:59515775-59515794 | None:intergenic | 40.0% | |
| GCTTCCTTAGCTTCTTTGAT+CGG | + | chr1.3:59513090-59513109 | MS.gene44175:CDS | 40.0% | |
| GGATGTATGTATTTGTGCAG+AGG | - | chr1.3:59515862-59515881 | None:intergenic | 40.0% | |
| GTGACAACATAATGAAGTGG+AGG | - | chr1.3:59513751-59513770 | None:intergenic | 40.0% | |
| GTGCTCCTCATATATAGTTG+GGG | - | chr1.3:59514017-59514036 | None:intergenic | 40.0% | |
| TAGTGATAAATTGGGCAGCA+TGG | + | chr1.3:59515030-59515049 | MS.gene44175:CDS | 40.0% | |
| TCCAACAGATCAAAGAGAGT+TGG | - | chr1.3:59516126-59516145 | None:intergenic | 40.0% | |
| TCCATTACATGTAACCTCGT+AGG | - | chr1.3:59514845-59514864 | None:intergenic | 40.0% | |
| TCCTACGAGGTTACATGTAA+TGG | + | chr1.3:59514841-59514860 | MS.gene44175:CDS | 40.0% | |
| TCTGCTGCCTCCTAAAAAAA+GGG | - | chr1.3:59515914-59515933 | None:intergenic | 40.0% | |
| TGAAATCATGCCAATGTCAC+AGG | + | chr1.3:59513289-59513308 | MS.gene44175:CDS | 40.0% | |
| TGAATCTCTCGAACCTTTGA+AGG | - | chr1.3:59514156-59514175 | None:intergenic | 40.0% | |
| TGACTGTGTAAGTGAATGCA+TGG | + | chr1.3:59516209-59516228 | MS.gene44175:CDS | 40.0% | |
| TGCAGATCAAGAGTTCTCAA+GGG | - | chr1.3:59514068-59514087 | None:intergenic | 40.0% | |
| TGCCCAATTTATCACTAAGC+AGG | - | chr1.3:59515027-59515046 | None:intergenic | 40.0% | |
| TTACAGCTTGGATCTTCCAT+TGG | - | chr1.3:59515304-59515323 | None:intergenic | 40.0% | |
| TTGCAGATCAAGAGTTCTCA+AGG | - | chr1.3:59514069-59514088 | None:intergenic | 40.0% | |
| ! | AAAGGTTGGTTAGCAGAAGA+AGG | + | chr1.3:59516306-59516325 | MS.gene44175:CDS | 40.0% |
| ! | AAGGTTGGTTAGCAGAAGAA+GGG | + | chr1.3:59516307-59516326 | MS.gene44175:CDS | 40.0% |
| ! | CTAAGCAAGTGATGGAAACA+AGG | + | chr1.3:59514753-59514772 | MS.gene44175:CDS | 40.0% |
| ! | GTTTAGAAGCATGGAAGAAG+AGG | + | chr1.3:59516347-59516366 | MS.gene44175:CDS | 40.0% |
| ! | TGAAGCCTTTGAAAATGGCT+TGG | + | chr1.3:59516437-59516456 | MS.gene44175:CDS | 40.0% |
| ! | TGATGATGAAGGGTGTGATA+AGG | + | chr1.3:59513674-59513693 | MS.gene44175:CDS | 40.0% |
| ! | TTGTTGAAAGGTGCAAAGCA+TGG | + | chr1.3:59516253-59516272 | MS.gene44175:CDS | 40.0% |
| !! | AGAACACCGTTCTATTTCTG+AGG | - | chr1.3:59514918-59514937 | None:intergenic | 40.0% |
| !! | TCTATTTCTGAGGCACATTG+AGG | - | chr1.3:59514908-59514927 | None:intergenic | 40.0% |
| !! | TTTGCTGGTTTGCCTAAGAA+CGG | - | chr1.3:59514345-59514364 | None:intergenic | 40.0% |
| AAGCATGGAAGAAGAGGTGA+TGG | + | chr1.3:59516353-59516372 | MS.gene44175:CDS | 45.0% | |
| AAGGACATGAGCACTCCATT+GGG | + | chr1.3:59516393-59516412 | MS.gene44175:CDS | 45.0% | |
| AAGTCAAGCCATCTACCCAA+TGG | - | chr1.3:59516411-59516430 | None:intergenic | 45.0% | |
| CAATGCCGAGGTTCAAAGTA+GGG | + | chr1.3:59514232-59514251 | MS.gene44175:CDS | 45.0% | |
| CATCAGTGATGAGGAAAGGT+TGG | + | chr1.3:59516292-59516311 | MS.gene44175:CDS | 45.0% | |
| CTCTGCTGCCTCCTAAAAAA+AGG | - | chr1.3:59515915-59515934 | None:intergenic | 45.0% | |
| CTGGTGTTTACCTGTGACAT+TGG | - | chr1.3:59513302-59513321 | None:intergenic | 45.0% | |
| GATGTCGGAGTTTAGAAGCA+TGG | + | chr1.3:59516338-59516357 | MS.gene44175:CDS | 45.0% | |
| GCAGGCAAGTTCTTGTTGAA+AGG | + | chr1.3:59516241-59516260 | MS.gene44175:CDS | 45.0% | |
| GCATGGTATGCAACACATCA+AGG | + | chr1.3:59514975-59514994 | MS.gene44175:CDS | 45.0% | |
| GCCAACTCTCTTTGATCTGT+TGG | + | chr1.3:59516122-59516141 | MS.gene44175:CDS | 45.0% | |
| GTCGACTACTAAGCAAGTGA+TGG | + | chr1.3:59514745-59514764 | MS.gene44175:CDS | 45.0% | |
| GTTCTTAGGCAAACCAGCAA+AGG | + | chr1.3:59514344-59514363 | MS.gene44175:CDS | 45.0% | |
| TGAATCCAAACCCATGAGTC+TGG | - | chr1.3:59513715-59513734 | None:intergenic | 45.0% | |
| TGGCATGAATCAGCAACTTC+AGG | + | chr1.3:59515090-59515109 | MS.gene44175:CDS | 45.0% | |
| ! | AGAAGGGTACAAGGAGATGT+CGG | + | chr1.3:59516323-59516342 | MS.gene44175:CDS | 45.0% |
| ! | AGGAGCACAATGTCTTCAGT+TGG | + | chr1.3:59514029-59514048 | MS.gene44175:CDS | 45.0% |
| ! | CTGATCACGCCTCTTCTTTT+CGG | - | chr1.3:59514552-59514571 | None:intergenic | 45.0% |
| ! | GAAATGGGTTTAGCAGACCT+TGG | - | chr1.3:59513891-59513910 | None:intergenic | 45.0% |
| ! | GGTCGAACTTTCTGAAGAAC+AGG | - | chr1.3:59514411-59514430 | None:intergenic | 45.0% |
| ! | GTTAGCAGAAGAAGGGTACA+AGG | + | chr1.3:59516314-59516333 | MS.gene44175:CDS | 45.0% |
| ! | TACTCTTGTGCTGGACCTTT+TGG | - | chr1.3:59514483-59514502 | None:intergenic | 45.0% |
| !! | ATTTCTGAGGCACATTGAGG+TGG | - | chr1.3:59514905-59514924 | None:intergenic | 45.0% |
| !! | TTTCTGAGGCACATTGAGGT+GGG | - | chr1.3:59514904-59514923 | None:intergenic | 45.0% |
| !! | AAAAAATTAAAAGAAAAAAA+TGG | - | chr1.3:59513362-59513381 | None:intergenic | 5.0% |
| !!! | TTTTTTCTTTTAATTTTTTA+TGG | + | chr1.3:59513363-59513382 | MS.gene44175:intron | 5.0% |
| ACTGATGCCACCATGCATCT+AGG | - | chr1.3:59516279-59516298 | None:intergenic | 50.0% | |
| AGTAGCCAGACTCATGGGTT+TGG | + | chr1.3:59513707-59513726 | MS.gene44175:CDS | 50.0% | |
| CAAAGCATGGCCTAGATGCA+TGG | + | chr1.3:59516266-59516285 | MS.gene44175:CDS | 50.0% | |
| CAAGGACATGAGCACTCCAT+TGG | + | chr1.3:59516392-59516411 | MS.gene44175:CDS | 50.0% | |
| CCAATGCCGAGGTTCAAAGT+AGG | + | chr1.3:59514231-59514250 | MS.gene44175:CDS | 50.0% | |
| CCTACTTTGAACCTCGGCAT+TGG | - | chr1.3:59514234-59514253 | None:intergenic | 50.0% | |
| CTGATGCCAGAAAGTTGCCA+AGG | - | chr1.3:59515206-59515225 | None:intergenic | 50.0% | |
| CTGTTGGAGAATCGGAGAAC+TGG | + | chr1.3:59516138-59516157 | MS.gene44175:CDS | 50.0% | |
| GTGGCATCAGTGATGAGGAA+AGG | + | chr1.3:59516288-59516307 | MS.gene44175:CDS | 50.0% | |
| TGAGCACTCCATTGGGTAGA+TGG | + | chr1.3:59516400-59516419 | MS.gene44175:CDS | 50.0% | |
| TGTAACACCATCCAATGCCG+AGG | + | chr1.3:59514220-59514239 | MS.gene44175:CDS | 50.0% | |
| ! | CATGGAAGAAGAGGTGATGG+TGG | + | chr1.3:59516356-59516375 | MS.gene44175:CDS | 50.0% |
| ! | CTTTGAACCTCGGCATTGGA+TGG | - | chr1.3:59514230-59514249 | None:intergenic | 50.0% |
| !! | GGCATCTGCTAAGAGCATTG+AGG | + | chr1.3:59513986-59514005 | MS.gene44175:CDS | 50.0% |
| !! | GGTGGATGAGCTTGTTAGCA+AGG | + | chr1.3:59516374-59516393 | MS.gene44175:CDS | 50.0% |
| !! | GTTTGTTATCGTCCTAGCGC+TGG | - | chr1.3:59514432-59514451 | None:intergenic | 50.0% |
| AGCATGGCCTAGATGCATGG+TGG | + | chr1.3:59516269-59516288 | MS.gene44175:CDS | 55.0% | |
| ATGAGTCTGGCTACTAGCCC+TGG | - | chr1.3:59513702-59513721 | None:intergenic | 55.0% | |
| CAGAAAGTTCGACCAGCGCT+AGG | + | chr1.3:59514417-59514436 | MS.gene44175:CDS | 55.0% | |
| CGCAACACGGAACCAAGATG+AGG | + | chr1.3:59514105-59514124 | MS.gene44175:CDS | 55.0% | |
| CGTGATCAGAATGACGCACG+AGG | + | chr1.3:59514563-59514582 | MS.gene44175:CDS | 55.0% | |
| GCATGGTGGCATCAGTGATG+AGG | + | chr1.3:59516283-59516302 | MS.gene44175:CDS | 55.0% | |
| GCCAGAACAGCACCGTTCTT+AGG | + | chr1.3:59514330-59514349 | MS.gene44175:CDS | 55.0% | |
| GGAGAATCGGAGAACTGGTG+TGG | + | chr1.3:59516143-59516162 | MS.gene44175:CDS | 55.0% | |
| TGAGTCTGGCTACTAGCCCT+GGG | - | chr1.3:59513701-59513720 | None:intergenic | 55.0% | |
| ! | AAGGGTGTGATAAGGCCCCA+GGG | + | chr1.3:59513682-59513701 | MS.gene44175:CDS | 55.0% |
| ! | AGGGCTAGTAGCCAGACTCA+TGG | + | chr1.3:59513701-59513720 | MS.gene44175:CDS | 55.0% |
| ! | GGGCTAGTAGCCAGACTCAT+GGG | + | chr1.3:59513702-59513721 | MS.gene44175:CDS | 55.0% |
| !! | GCCTAAGAACGGTGCTGTTC+TGG | - | chr1.3:59514334-59514353 | None:intergenic | 55.0% |
| GAGTCTGGCTACTAGCCCTG+GGG | - | chr1.3:59513700-59513719 | None:intergenic | 60.0% | |
| ! | GAAGGGTGTGATAAGGCCCC+AGG | + | chr1.3:59513681-59513700 | MS.gene44175:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 59513065 | 59516524 | 59513065 | ID=MS.gene44175 |
| chr1.3 | mRNA | 59513065 | 59516524 | 59513065 | ID=MS.gene44175.t1;Parent=MS.gene44175 |
| chr1.3 | exon | 59513065 | 59513161 | 59513065 | ID=MS.gene44175.t1.exon1;Parent=MS.gene44175.t1 |
| chr1.3 | CDS | 59513065 | 59513161 | 59513065 | ID=cds.MS.gene44175.t1;Parent=MS.gene44175.t1 |
| chr1.3 | exon | 59513261 | 59513322 | 59513261 | ID=MS.gene44175.t1.exon2;Parent=MS.gene44175.t1 |
| chr1.3 | CDS | 59513261 | 59513322 | 59513261 | ID=cds.MS.gene44175.t1;Parent=MS.gene44175.t1 |
| chr1.3 | exon | 59513591 | 59515111 | 59513591 | ID=MS.gene44175.t1.exon3;Parent=MS.gene44175.t1 |
| chr1.3 | CDS | 59513591 | 59515111 | 59513591 | ID=cds.MS.gene44175.t1;Parent=MS.gene44175.t1 |
| chr1.3 | exon | 59515292 | 59515436 | 59515292 | ID=MS.gene44175.t1.exon4;Parent=MS.gene44175.t1 |
| chr1.3 | CDS | 59515292 | 59515436 | 59515292 | ID=cds.MS.gene44175.t1;Parent=MS.gene44175.t1 |
| chr1.3 | exon | 59515923 | 59516524 | 59515923 | ID=MS.gene44175.t1.exon5;Parent=MS.gene44175.t1 |
| chr1.3 | CDS | 59515923 | 59516524 | 59515923 | ID=cds.MS.gene44175.t1;Parent=MS.gene44175.t1 |
| Gene Sequence |
| Protein sequence |
