AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene005414

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005414.t1 MTR_3g008700 96.008 476 19 0 1 476 52 527 0.0 942
MS.gene005414.t1 MTR_3g033690 93.908 476 28 1 1 476 52 526 0.0 942
MS.gene005414.t1 MTR_3g008720 95.798 476 20 0 1 476 52 527 0.0 942
MS.gene005414.t1 MTR_3g008640 96.008 476 19 0 1 476 52 527 0.0 939
MS.gene005414.t1 MTR_7g053360 95.378 476 22 0 1 476 52 527 0.0 939
MS.gene005414.t1 MTR_4g035980 66.597 479 150 4 6 476 63 539 0.0 666
MS.gene005414.t1 MTR_4g025690 54.430 474 202 9 4 476 53 513 1.16e-170 490
MS.gene005414.t1 MTR_4g025730 49.585 482 216 12 2 476 48 509 1.98e-156 454
MS.gene005414.t1 MTR_8g104655 46.296 486 232 7 12 476 64 541 1.27e-149 437
MS.gene005414.t1 MTR_7g108905 48.409 440 206 7 51 472 116 552 6.77e-143 421
MS.gene005414.t1 MTR_8g104645 56.932 339 141 2 142 476 35 372 6.41e-140 407
MS.gene005414.t1 MTR_7g050980 47.379 477 226 11 16 476 88 555 3.48e-139 411
MS.gene005414.t1 MTR_7g050870 48.238 454 212 11 37 476 110 554 3.28e-136 404
MS.gene005414.t1 MTR_7g050950 49.203 439 199 12 52 476 125 553 4.86e-136 403
MS.gene005414.t1 MTR_4g087980 48.848 434 208 6 51 476 89 516 1.00e-133 396
MS.gene005414.t1 MTR_2g044880 45.747 435 223 7 51 476 95 525 6.24e-132 392
MS.gene005414.t1 MTR_3g091380 45.652 460 217 10 46 476 142 597 1.49e-129 388
MS.gene005414.t1 MTR_4g087970 45.872 436 222 6 51 476 86 517 4.33e-129 384
MS.gene005414.t1 MTR_8g023310 48.931 421 188 8 80 476 172 589 1.71e-128 385
MS.gene005414.t1 MTR_4g025670 45.370 432 220 6 51 476 68 489 2.22e-128 382
MS.gene005414.t1 MTR_8g104580 41.975 486 220 9 12 476 56 500 3.07e-123 369
MS.gene005414.t1 MTR_1g008140 43.871 465 225 10 46 476 145 607 1.98e-122 370
MS.gene005414.t1 MTR_7g112580 46.715 411 193 7 81 476 143 542 2.00e-122 368
MS.gene005414.t1 MTR_7g108900 42.827 467 222 9 51 476 98 560 3.56e-122 368
MS.gene005414.t1 MTR_4g124520 43.059 425 226 8 61 476 104 521 1.01e-119 360
MS.gene005414.t1 MTR_1g083520 43.312 471 249 9 22 476 60 528 1.08e-119 360
MS.gene005414.t1 MTR_8g042900 45.351 441 217 9 51 476 150 581 1.32e-119 362
MS.gene005414.t1 MTR_2g044810 40.928 474 248 11 18 476 78 534 1.59e-118 358
MS.gene005414.t1 MTR_8g042910 51.652 333 154 4 149 476 282 612 4.22e-117 357
MS.gene005414.t1 MTR_3g010780 42.443 483 248 11 15 476 101 574 7.79e-117 355
MS.gene005414.t1 MTR_1g054880 43.103 464 222 11 51 476 99 558 1.02e-116 354
MS.gene005414.t1 MTR_1g088020 51.952 333 151 4 151 476 225 555 2.55e-115 350
MS.gene005414.t1 MTR_7g108875 40.120 501 254 11 19 476 67 564 4.57e-114 347
MS.gene005414.t1 MTR_3g010770 51.506 332 154 5 150 476 246 575 1.13e-112 344
MS.gene005414.t1 MTR_7g108890 50.450 333 158 4 149 476 232 562 6.73e-112 342
MS.gene005414.t1 MTR_1g088225 51.051 333 152 5 151 476 225 553 2.51e-109 335
MS.gene005414.t1 MTR_0458s0030 53.535 297 121 4 195 476 20 314 3.37e-108 323
MS.gene005414.t1 MTR_1g088040 53.535 297 121 4 195 476 20 314 3.37e-108 323
MS.gene005414.t1 MTR_8g023150 40.787 483 259 9 15 476 106 582 8.35e-107 329
MS.gene005414.t1 MTR_4g124550 39.741 463 244 8 41 476 139 593 3.62e-105 325
MS.gene005414.t1 MTR_0618s0020 61.842 228 86 1 249 476 2 228 2.44e-103 308
MS.gene005414.t1 MTR_1g083470 37.557 442 252 7 52 472 128 566 1.93e-99 310
MS.gene005414.t1 MTR_1g083500 37.557 442 252 7 52 472 128 566 1.93e-99 310
MS.gene005414.t1 MTR_4g005170 38.149 443 248 8 52 472 133 571 5.26e-98 308
MS.gene005414.t1 MTR_1g083510 37.931 464 243 12 52 475 124 582 2.33e-97 305
MS.gene005414.t1 MTR_1g083490 37.698 443 250 8 52 472 133 571 3.01e-97 305
MS.gene005414.t1 MTR_4g005180 36.774 465 267 9 30 472 94 553 4.44e-96 301
MS.gene005414.t1 MTR_1g086210 41.310 397 220 8 87 476 179 569 7.03e-96 301
MS.gene005414.t1 MTR_4g120290 35.774 478 265 8 27 475 107 571 1.20e-94 298
MS.gene005414.t1 MTR_1g086190 38.608 474 257 11 30 476 97 563 1.54e-93 294
MS.gene005414.t1 MTR_2g044810 52.362 254 119 2 223 476 214 465 3.52e-93 290
MS.gene005414.t1 MTR_4g120280 35.417 480 270 9 32 475 96 571 5.15e-93 293
MS.gene005414.t1 MTR_7g112590 36.585 492 264 14 22 475 101 582 3.83e-92 291
MS.gene005414.t1 MTR_2g436040 38.329 407 231 8 81 473 143 543 1.88e-91 290
MS.gene005414.t1 MTR_8g088610 42.690 342 191 3 133 473 36 373 3.12e-91 282
MS.gene005414.t1 MTR_3g095920 37.367 471 247 13 31 465 95 553 1.21e-90 287
MS.gene005414.t1 MTR_2g044660 46.815 314 160 5 163 476 326 632 4.94e-89 285
MS.gene005414.t1 MTR_8g093460 37.526 477 251 15 22 468 84 543 3.24e-88 280
MS.gene005414.t1 MTR_7g110490 37.995 429 225 10 81 471 144 569 4.17e-86 275
MS.gene005414.t1 MTR_7g110510 37.995 429 225 10 81 471 144 569 4.17e-86 275
MS.gene005414.t1 MTR_7g110440 39.401 401 223 8 89 476 181 574 6.73e-86 275
MS.gene005414.t1 MTR_2g436050 34.898 490 272 12 22 475 85 563 1.15e-85 274
MS.gene005414.t1 MTR_5g083620 39.607 356 203 7 127 476 7 356 3.22e-82 258
MS.gene005414.t1 MTR_2g105560 40.952 315 170 5 163 476 40 339 2.93e-76 243
MS.gene005414.t1 MTR_7g110560 40.118 339 196 3 142 476 214 549 3.33e-76 249
MS.gene005414.t1 MTR_7g110420 38.378 370 205 6 129 476 218 586 5.54e-76 249
MS.gene005414.t1 MTR_7g107180 40.764 314 172 6 164 476 7 307 3.62e-73 233
MS.gene005414.t1 MTR_7g110430 34.000 400 212 9 89 476 181 540 1.35e-64 218
MS.gene005414.t1 MTR_7g111560 32.231 484 296 15 11 476 87 556 6.13e-63 214
MS.gene005414.t1 MTR_2g039530 39.482 309 170 7 137 443 26 319 6.26e-58 195
MS.gene005414.t1 MTR_6g012800 34.843 287 164 6 162 438 4 277 3.02e-55 187
MS.gene005414.t1 MTR_0458s0010 36.937 333 164 8 151 476 225 518 3.04e-55 192
MS.gene005414.t1 MTR_6g088810 35.890 326 180 10 152 465 69 377 2.18e-53 184
MS.gene005414.t1 MTR_6g024165 36.656 311 169 9 166 466 43 335 1.85e-52 180
MS.gene005414.t1 MTR_8g102380 35.417 336 181 12 146 467 66 379 2.44e-52 181
MS.gene005414.t1 MTR_1g086540 36.111 324 180 8 154 467 40 346 3.82e-52 180
MS.gene005414.t1 MTR_7g011530 34.035 285 161 6 166 438 8 277 2.30e-49 171
MS.gene005414.t1 MTR_7g102600 30.894 369 218 11 105 465 54 393 4.12e-47 168
MS.gene005414.t1 MTR_5g083590 32.063 315 161 5 163 476 6 268 5.06e-44 156
MS.gene005414.t1 MTR_8g102380 35.587 281 149 9 146 412 66 328 7.80e-44 157
MS.gene005414.t1 MTR_5g093970 33.333 303 187 5 164 466 43 330 2.17e-43 156
MS.gene005414.t1 MTR_6g042660 33.808 281 159 9 164 438 37 296 5.47e-43 155
MS.gene005414.t1 MTR_5g095490 34.091 308 174 9 170 465 67 357 7.81e-43 155
MS.gene005414.t1 MTR_7g092780 32.484 314 188 7 164 467 90 389 1.08e-41 153
MS.gene005414.t1 MTR_4g124740 31.402 328 190 10 147 465 38 339 3.27e-41 150
MS.gene005414.t1 MTR_5g012600 30.380 316 193 8 164 468 63 362 4.98e-40 148
MS.gene005414.t1 MTR_1g033050 32.986 288 169 7 159 438 13 284 7.61e-40 146
MS.gene005414.t1 MTR_6g042690 33.099 284 162 8 164 438 39 303 1.84e-37 140
MS.gene005414.t1 MTR_5g088300 31.250 304 183 8 164 465 37 316 2.59e-37 139
MS.gene005414.t1 MTR_2g033970 29.358 327 202 8 150 467 42 348 3.45e-36 137
MS.gene005414.t1 MTR_2g073390 30.000 340 199 10 145 465 42 361 7.71e-36 136
MS.gene005414.t1 MTR_5g088280 30.323 310 190 8 160 467 35 320 1.28e-35 135
MS.gene005414.t1 MTR_4g074290 29.155 343 212 9 138 465 35 361 1.76e-35 135
MS.gene005414.t1 MTR_5g088290 30.263 304 187 7 164 465 48 328 1.76e-33 129
MS.gene005414.t1 MTR_4g051810 31.636 275 169 5 164 438 37 292 5.68e-33 127
MS.gene005414.t1 MTR_0009s0350 29.412 340 203 10 144 465 41 361 1.40e-32 127
MS.gene005414.t1 MTR_0009s0340 29.412 340 203 10 144 465 41 361 1.40e-32 127
MS.gene005414.t1 MTR_2g436600 28.049 328 196 10 150 467 41 338 6.50e-30 119
MS.gene005414.t1 MTR_8g036225 29.577 284 173 8 164 438 33 298 1.81e-28 115
MS.gene005414.t1 MTR_6g025590 37.126 167 96 5 166 324 51 216 5.05e-25 103
MS.gene005414.t1 MTR_0408s0030 41.414 99 48 2 340 438 35 123 4.52e-18 81.6
MS.gene005414.t1 MTR_4g130790 32.143 196 117 6 162 346 20 210 7.18e-18 84.0
MS.gene005414.t1 MTR_2g436070 28.936 235 131 7 32 236 93 321 3.36e-17 83.6
MS.gene005414.t1 MTR_6g024200 37.600 125 66 3 341 465 164 276 8.19e-16 78.2
MS.gene005414.t1 MTR_7g102570 32.174 115 65 3 324 436 3 106 1.55e-11 62.0
MS.gene005414.t1 MTR_7g102580 40.698 86 41 3 239 319 73 153 2.19e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene005414.t1 AT5G51490 56.513 476 192 7 12 476 65 536 0.0 555
MS.gene005414.t1 AT3G47400 56.549 481 196 6 8 476 115 594 0.0 549
MS.gene005414.t1 AT5G51500 56.632 475 193 8 12 476 69 540 0.0 547
MS.gene005414.t1 AT2G45220 51.050 476 217 10 2 476 51 511 3.49e-160 463
MS.gene005414.t1 AT1G11580 46.336 464 234 7 22 476 100 557 3.87e-135 401
MS.gene005414.t1 AT1G11580 46.336 464 234 7 22 476 121 578 6.27e-135 401
MS.gene005414.t1 AT4G00190 45.127 472 238 9 7 476 22 474 1.52e-134 397
MS.gene005414.t1 AT3G60730 42.540 496 240 8 15 476 35 519 2.61e-131 390
MS.gene005414.t1 AT1G23200 43.340 503 230 10 13 476 68 554 4.95e-131 390
MS.gene005414.t1 AT5G53370 46.460 452 217 7 46 476 138 585 5.85e-131 392
MS.gene005414.t1 AT5G53370 46.460 452 217 7 46 476 174 621 3.08e-130 391
MS.gene005414.t1 AT4G02320 45.536 448 213 8 51 476 80 518 6.82e-127 379
MS.gene005414.t1 AT3G14310 45.877 473 210 8 46 476 124 592 8.29e-127 381
MS.gene005414.t1 AT3G43270 44.619 446 224 7 51 476 83 525 9.75e-125 374
MS.gene005414.t1 AT4G02300 44.444 441 226 8 51 476 96 532 1.15e-124 374
MS.gene005414.t1 AT3G59010 44.632 475 231 8 18 476 70 528 3.09e-124 372
MS.gene005414.t1 AT4G33220 43.107 457 225 7 51 476 71 523 6.02e-124 372
MS.gene005414.t1 AT1G53830 45.652 460 212 8 51 476 132 587 1.16e-123 373
MS.gene005414.t1 AT4G33220 51.156 346 166 3 131 476 60 402 5.52e-122 362
MS.gene005414.t1 AT3G49220 44.248 452 225 8 46 476 151 596 7.45e-122 369
MS.gene005414.t1 AT5G20860 44.318 440 227 9 47 476 107 538 1.77e-121 365
MS.gene005414.t1 AT3G49220 44.248 452 225 8 46 476 196 641 3.29e-121 368
MS.gene005414.t1 AT5G04960 43.096 478 242 11 15 474 97 562 1.83e-120 364
MS.gene005414.t1 AT2G43050 43.875 449 226 8 36 476 86 516 3.37e-120 362
MS.gene005414.t1 AT4G02330 40.232 517 253 13 10 476 61 571 2.16e-119 361
MS.gene005414.t1 AT1G02810 40.619 485 227 8 51 476 95 577 7.50e-118 358
MS.gene005414.t1 AT3G05620 45.679 405 198 8 81 476 150 541 2.62e-116 352
MS.gene005414.t1 AT2G47550 52.836 335 151 4 147 476 226 558 3.36e-116 353
MS.gene005414.t1 AT2G26450 39.130 483 267 8 7 476 143 611 6.70e-115 351
MS.gene005414.t1 AT2G26440 41.964 448 231 8 51 476 107 547 1.66e-114 348
MS.gene005414.t1 AT5G49180 41.277 470 249 9 27 472 100 566 1.86e-114 348
MS.gene005414.t1 AT3G10710 42.438 443 220 8 52 476 136 561 1.04e-112 344
MS.gene005414.t1 AT4G33230 40.492 447 240 9 52 476 164 606 3.16e-111 342
MS.gene005414.t1 AT5G27870 39.785 465 254 9 26 476 110 562 1.19e-110 343
MS.gene005414.t1 AT3G05610 38.788 495 279 9 1 476 76 565 1.93e-110 341
MS.gene005414.t1 AT3G27980 45.025 402 203 9 83 476 106 497 5.54e-110 335
MS.gene005414.t1 AT4G03930 40.598 468 239 11 19 476 86 524 1.12e-108 332
MS.gene005414.t1 AT1G11590 42.529 435 230 10 54 476 98 524 1.20e-108 332
MS.gene005414.t1 AT3G06830 41.527 419 217 9 81 474 151 566 1.00e-106 328
MS.gene005414.t1 AT3G10720 51.111 315 150 3 164 476 303 615 1.99e-106 329
MS.gene005414.t1 AT5G04970 48.276 319 161 3 160 476 304 620 4.66e-101 316
MS.gene005414.t1 AT3G10720 55.172 261 115 2 216 476 1 259 1.26e-99 300
MS.gene005414.t1 AT5G20860 40.573 419 203 8 47 455 107 489 6.77e-99 306
MS.gene005414.t1 AT1G53840 37.398 492 260 12 15 470 102 581 2.05e-98 308
MS.gene005414.t1 AT3G14300 37.708 480 258 9 5 461 492 953 1.46e-94 307
MS.gene005414.t1 AT4G15980 42.700 363 200 6 117 474 341 700 2.29e-94 300
MS.gene005414.t1 AT4G15980 42.700 363 200 6 117 474 351 710 4.25e-94 300
MS.gene005414.t1 AT5G09760 48.495 299 140 5 158 443 235 532 9.79e-86 274
MS.gene005414.t1 AT5G09760 48.495 299 140 5 158 443 261 558 1.47e-85 274
MS.gene005414.t1 AT1G11370 49.393 247 124 1 161 407 43 288 7.53e-83 258
MS.gene005414.t1 AT5G64640 37.277 448 235 13 56 468 165 601 6.64e-82 265
MS.gene005414.t1 AT2G47030 39.045 356 199 6 135 476 237 588 1.16e-74 246
MS.gene005414.t1 AT2G47040 38.244 353 203 6 135 476 247 595 4.66e-73 242
MS.gene005414.t1 AT3G62170 37.432 366 199 8 135 476 229 588 1.57e-69 232
MS.gene005414.t1 AT2G36710 33.542 319 189 8 161 470 86 390 4.06e-50 176
MS.gene005414.t1 AT2G21610 33.555 301 178 7 166 465 53 332 4.25e-50 174
MS.gene005414.t1 AT2G36700 34.202 307 182 7 164 465 42 333 5.13e-50 174
MS.gene005414.t1 AT2G21610 33.555 301 178 7 166 465 58 337 5.46e-50 174
MS.gene005414.t1 AT5G19730 31.215 362 204 11 127 465 42 381 2.30e-49 173
MS.gene005414.t1 AT3G29090 33.333 285 163 6 166 438 9 278 1.04e-48 170
MS.gene005414.t1 AT1G05310 33.013 312 185 7 164 465 91 388 2.27e-44 160
MS.gene005414.t1 AT3G17060 31.269 323 191 8 153 465 35 336 1.90e-42 154
MS.gene005414.t1 AT5G07430 29.972 357 215 10 123 465 20 355 3.90e-41 151
MS.gene005414.t1 AT5G47500 30.255 314 192 8 164 466 61 358 2.13e-39 146
MS.gene005414.t1 AT1G44980 41.799 189 106 3 143 328 54 241 3.93e-39 142
MS.gene005414.t1 AT5G55590 33.333 318 183 10 160 465 78 378 8.90e-38 142
MS.gene005414.t1 AT5G07420 29.738 343 208 10 138 465 31 355 4.58e-37 140
MS.gene005414.t1 AT5G55590 34.866 261 145 7 160 408 78 325 1.05e-36 138
MS.gene005414.t1 AT3G24130 31.119 286 171 7 164 438 34 304 1.24e-36 138
MS.gene005414.t1 AT5G18990 29.568 301 175 9 153 438 21 299 6.66e-33 127
MS.gene005414.t1 AT5G61680 28.986 345 207 12 139 465 34 358 7.93e-33 128
MS.gene005414.t1 AT5G26810 29.252 294 170 8 164 438 34 308 1.62e-31 124
MS.gene005414.t1 AT1G69940 28.657 335 207 11 145 465 39 355 2.99e-31 124
MS.gene005414.t1 AT5G07410 28.657 335 207 11 145 465 39 355 3.27e-31 124
MS.gene005414.t1 AT2G19150 26.807 332 203 10 156 472 33 339 1.27e-29 119
MS.gene005414.t1 AT2G19150 28.195 266 159 7 156 408 33 279 2.15e-27 111
MS.gene005414.t1 AT2G47280 26.370 292 183 8 160 438 31 303 6.46e-26 108
MS.gene005414.t1 AT3G49220 29.730 222 130 7 46 246 196 412 3.24e-21 96.3

Find 91 sgRNAs with CRISPR-Local

Find 144 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTCCACAATTGTCAAATT+AGG 0.096980 1.1:-63464359 MS.gene005414:CDS
TCATGCATTGAAAACCAATT+TGG 0.214818 1.1:+63465505 None:intergenic
CTTCTACCGGTGTGCTATAT+CGG 0.231966 1.1:-63464583 MS.gene005414:CDS
ACTTCTAGAACTTGTTATTA+TGG 0.232263 1.1:+63465258 None:intergenic
ACGGTTGCTGGACTCCTTGC+TGG 0.264051 1.1:-63464066 MS.gene005414:CDS
GCTCAAGACACATTGTATTA+TGG 0.265395 1.1:-63464186 MS.gene005414:CDS
TGTGAGGACCAGCAGTATTT+TGG 0.265892 1.1:+63464649 None:intergenic
ATTCCACAATTGTCAAATTA+GGG 0.271376 1.1:-63464358 MS.gene005414:CDS
AAGAAGGGTCATTTCCAAAT+TGG 0.272902 1.1:-63465519 MS.gene005414:CDS
TGATAAGTACAAAACCTTCT+TGG 0.297993 1.1:-63464310 MS.gene005414:CDS
GCATCAAAGTTTACGGTTGC+TGG 0.302438 1.1:-63464078 MS.gene005414:CDS
GGAATGAAATTCCAGTGTTT+TGG 0.313831 1.1:+63464376 None:intergenic
GTAAACTTTGATGCTTCATT+TGG 0.314281 1.1:+63464087 None:intergenic
TCAAACATAGAGTTGAATTC+AGG 0.324256 1.1:-63466345 MS.gene005414:CDS
TATGGAGAGTATGAGAATTA+TGG 0.325330 1.1:-63464168 MS.gene005414:CDS
GATCAAAGACCAGATGTAAA+TGG 0.333623 1.1:+63464015 None:intergenic
AAATGAAGCATCAAAGTTTA+CGG 0.334310 1.1:-63464085 MS.gene005414:CDS
GAATGGGTCGCCACGACCTT+GGG 0.357342 1.1:+63464398 None:intergenic
TTTCAAGAAATGCATATTGA+TGG 0.359546 1.1:+63465991 None:intergenic
CAACAGCAAATAGAGTAAAA+TGG 0.362307 1.1:-63464134 MS.gene005414:CDS
GGCACCGTAGACTTCATCTT+TGG 0.365133 1.1:-63464498 MS.gene005414:CDS
CATCTCAACCGTACACTTGA+AGG 0.367169 1.1:-63466181 MS.gene005414:CDS
GATAAGTACAAAACCTTCTT+GGG 0.374659 1.1:-63464309 MS.gene005414:CDS
TACCGACAATGCTTCATCTA+TGG 0.380171 1.1:-63464519 MS.gene005414:CDS
GGAATGGGTCGCCACGACCT+TGG 0.392562 1.1:+63464397 None:intergenic
TCCGTATATAAAACGGTTCA+TGG 0.420847 1.1:-63466238 MS.gene005414:CDS
TAAACTTTGATGCTTCATTT+GGG 0.423452 1.1:+63464088 None:intergenic
CCAATGTTATTGAGATGATA+AGG 0.438431 1.1:-63466024 MS.gene005414:CDS
AGCCATGTTTGTACATCATT+TGG 0.450556 1.1:+63466130 None:intergenic
TTCTACCGGTGTGCTATATC+GGG 0.452629 1.1:-63464582 MS.gene005414:CDS
AATCTTGTGGTGGCAAAAGA+TGG 0.472687 1.1:-63465445 MS.gene005414:CDS
CAGCCCTAATTTGACAATTG+TGG 0.474354 1.1:+63464355 None:intergenic
GGGCAGTGATCATGTTAGCT+TGG 0.487370 1.1:+63464418 None:intergenic
ACAAGTTCTAGAAGTGTTCA+AGG 0.492055 1.1:-63465250 MS.gene005414:CDS
AATATTGAAACATGTAAAAG+TGG 0.495425 1.1:-63466091 MS.gene005414:CDS
TGCCATAGATGAAGCATTGT+CGG 0.497633 1.1:+63464517 None:intergenic
CAAACATAGAGTTGAATTCA+GGG 0.498904 1.1:-63466344 MS.gene005414:CDS
CAGATCTCTCTGTCTTCTAC+CGG 0.498986 1.1:-63464596 MS.gene005414:CDS
TTTGTGATACATGTTAAGAA+AGG 0.500212 1.1:-63465355 MS.gene005414:CDS
AAACTCATCCGTATATAAAA+CGG 0.501207 1.1:-63466245 MS.gene005414:CDS
ACTACTGTGCCATTTACATC+TGG 0.505247 1.1:-63464024 MS.gene005414:CDS
CCTTATCATCTCAATAACAT+TGG 0.506543 1.1:+63466024 None:intergenic
CTATTTGCTGTTGATGAACC+AGG 0.508404 1.1:+63464144 None:intergenic
AATGACAACATTATGCTGAT+TGG 0.509190 1.1:-63465298 MS.gene005414:CDS
TTCAGTAAAGTTCAATCTTG+TGG 0.510785 1.1:-63465458 MS.gene005414:CDS
TATTTAAGCCTTCAAGTGTA+CGG 0.516272 1.1:+63466173 None:intergenic
ACTCTTGAGTATTGTTGCCA+TGG 0.524355 1.1:+63464282 None:intergenic
ATGATCACTGCCCAAGGTCG+TGG 0.528622 1.1:-63464408 MS.gene005414:CDS
TTGCCATGGCCTGCCCAAGA+AGG 0.533733 1.1:+63464296 None:intergenic
CAGAGAGATCTGAGGCTGAT+CGG 0.534495 1.1:+63464607 None:intergenic
ACCCCATGGAGACCAACCTA+GGG 0.538985 1.1:+63464221 None:intergenic
TGCTGTTGCAGAGCTATAAG+TGG 0.543731 1.1:+63465219 None:intergenic
GCAAATAGAGTAAAATGGCC+TGG 0.544601 1.1:-63464129 MS.gene005414:CDS
GTGGTGGCAAAAGATGGTTC+TGG 0.550327 1.1:-63465439 MS.gene005414:CDS
TTTGCAAGAAAGCCTTTGGA+TGG 0.551261 1.1:-63464441 MS.gene005414:CDS
AAACCTTCTTGGGCAGGCCA+TGG 0.552962 1.1:-63464299 MS.gene005414:CDS
AGTACAAAACCTTCTTGGGC+AGG 0.555197 1.1:-63464305 MS.gene005414:CDS
ACTTATAGCTCTGCAACAGC+AGG 0.557059 1.1:-63465217 MS.gene005414:intron
TCACTTGCAGAAACAGAAGA+AGG 0.559810 1.1:-63465535 MS.gene005414:intron
CATCTTTGGCAACGCTGCAG+TGG 0.565515 1.1:-63464484 MS.gene005414:CDS
ATAACCTTCCAAAATACTGC+TGG 0.573028 1.1:-63464657 MS.gene005414:CDS
AACATTATGCTGATTGGTGA+CGG 0.581662 1.1:-63465292 MS.gene005414:CDS
ATGTTAGCTTGGCCATCCAA+AGG 0.583281 1.1:+63464429 None:intergenic
CCTTGCTGGACCAACATGGT+TGG 0.591137 1.1:-63464052 MS.gene005414:CDS
CACCAAATGATGTACAAACA+TGG 0.597110 1.1:-63466132 MS.gene005414:CDS
GGCGACCCATTCCAAAACAC+TGG 0.597129 1.1:-63464387 MS.gene005414:CDS
CACCCCATGGAGACCAACCT+AGG 0.600934 1.1:+63464220 None:intergenic
CTAAGAGAAAATATAAGACA+AGG 0.604478 1.1:-63465378 MS.gene005414:CDS
TTTGTTATCACATGATAACC+AGG 0.611404 1.1:+63464111 None:intergenic
AGTAAAGTTCAATCTTGTGG+TGG 0.619446 1.1:-63465455 MS.gene005414:CDS
GCAAAATCAGTGTCACCCCA+TGG 0.619580 1.1:+63464207 None:intergenic
GTTGCCAAAGATGAAGTCTA+CGG 0.622853 1.1:+63464494 None:intergenic
CACTTGCAGAAACAGAAGAA+GGG 0.623150 1.1:-63465534 MS.gene005414:intron
GACTCCTTGCTGGACCAACA+TGG 0.624472 1.1:-63464056 MS.gene005414:CDS
GCCACAGCTTGACCTTTGTG+AGG 0.625981 1.1:+63464633 None:intergenic
CCAACCATGTTGGTCCAGCA+AGG 0.628774 1.1:+63464052 None:intergenic
GGGCTATCAAGACACTCTGA+TGG 0.632395 1.1:-63464562 MS.gene005414:CDS
TGTTTATAAAGAGAACATTG+AGG 0.633315 1.1:-63465332 MS.gene005414:CDS
GTAGAAGACAGAGAGATCTG+AGG 0.638257 1.1:+63464599 None:intergenic
AATACTGCTGGTCCTCACAA+AGG 0.646774 1.1:-63464645 MS.gene005414:CDS
GCAACAATACTCAAGAGTCA+TGG 0.646964 1.1:-63464277 MS.gene005414:CDS
CCCCTAGGTTGGTCTCCATG+GGG 0.648245 1.1:-63464222 MS.gene005414:CDS
TCCTCACAAAGGTCAAGCTG+TGG 0.651499 1.1:-63464634 MS.gene005414:CDS
GCTAACATGATCACTGCCCA+AGG 0.651878 1.1:-63464414 MS.gene005414:CDS
GAGTATGAGAATTATGGACC+TGG 0.657686 1.1:-63464162 MS.gene005414:CDS
CATTTCTTGAAACATAACAA+AGG 0.664591 1.1:-63465980 MS.gene005414:intron
GTAGTGCTAGCCAACCATGT+TGG 0.672951 1.1:+63464042 None:intergenic
CCCCATGGAGACCAACCTAG+GGG 0.685055 1.1:+63464222 None:intergenic
CCCATGGAGACCAACCTAGG+GGG 0.713906 1.1:+63464223 None:intergenic
AGTTCTAGAAGTGTTCAAGG+TGG 0.726357 1.1:-63465247 MS.gene005414:CDS
GATAGCCCGATATAGCACAC+CGG 0.756970 1.1:+63464577 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATCATTAACTAATAATT+TGG + chr1.1:63464725-63464744 None:intergenic 10.0%
!! TATAACTATACATATTTATA+TGG + chr1.1:63464789-63464808 None:intergenic 10.0%
!!! ATTGAATAACTTTATTTATA+AGG - chr1.1:63464484-63464503 MS.gene005414:CDS 10.0%
!! ATAAATTATCGAATGTTAAT+AGG - chr1.1:63464566-63464585 MS.gene005414:CDS 15.0%
!! ATGTATAGTTATAACTTATA+TGG - chr1.1:63464796-63464815 MS.gene005414:intron 15.0%
!! TAAATTATCGAATGTTAATA+GGG - chr1.1:63464567-63464586 MS.gene005414:CDS 15.0%
!! TAAATTATCGAATGTTTATT+TGG - chr1.1:63464529-63464548 MS.gene005414:CDS 15.0%
!! TTAGTTAATGATAATATTGA+TGG - chr1.1:63464730-63464749 MS.gene005414:intron 15.0%
!!! AGTTATTCAATAATTTTTAG+CGG + chr1.1:63464475-63464494 None:intergenic 15.0%
!!! GTATATATCTTCAATTTTTT+AGG - chr1.1:63464673-63464692 MS.gene005414:CDS 15.0%
!!! TTTAAACACTGATTTAATTA+GGG + chr1.1:63465473-63465492 None:intergenic 15.0%
!!! TTTTAAACACTGATTTAATT+AGG + chr1.1:63465474-63465493 None:intergenic 15.0%
!! AATATTGAAACATGTAAAAG+TGG - chr1.1:63464290-63464309 MS.gene005414:CDS 20.0%
!! AGGAAAAAAAGTTGTAAAAT+AGG - chr1.1:63464602-63464621 MS.gene005414:CDS 20.0%
!! TTATAACAAGAACATAAAAC+AGG + chr1.1:63465207-63465226 None:intergenic 20.0%
!!! TTGCAAAAATGTTACAATTT+TGG + chr1.1:63465927-63465946 None:intergenic 20.0%
! AAACTCATCCGTATATAAAA+CGG - chr1.1:63464136-63464155 MS.gene005414:CDS 25.0%
! ATTCCACAATTGTCAAATTA+GGG - chr1.1:63466023-63466042 MS.gene005414:CDS 25.0%
! CATTTCTTGAAACATAACAA+AGG - chr1.1:63464401-63464420 MS.gene005414:CDS 25.0%
! CTAAATCAGTGAAGAAAATT+TGG + chr1.1:63465323-63465342 None:intergenic 25.0%
! CTAAGAGAAAATATAAGACA+AGG - chr1.1:63465003-63465022 MS.gene005414:intron 25.0%
! TAAACTTTGATGCTTCATTT+GGG + chr1.1:63466296-63466315 None:intergenic 25.0%
! TATTTATAAGGAATGAAACG+CGG - chr1.1:63464496-63464515 MS.gene005414:CDS 25.0%
! TGTTTATAAAGAGAACATTG+AGG - chr1.1:63465049-63465068 MS.gene005414:intron 25.0%
! TTTCAAGAAATGCATATTGA+TGG + chr1.1:63464393-63464412 None:intergenic 25.0%
! TTTGTGATACATGTTAAGAA+AGG - chr1.1:63465026-63465045 MS.gene005414:intron 25.0%
!! AAATGAAGCATCAAAGTTTA+CGG - chr1.1:63466296-63466315 MS.gene005414:CDS 25.0%
!! CATCTTTTATGTTCAATAGT+AGG + chr1.1:63465386-63465405 None:intergenic 25.0%
!!! ACTTCTAGAACTTGTTATTA+TGG + chr1.1:63465126-63465145 None:intergenic 25.0%
!!! TCACTGATTTAGTTTTTTCT+AGG - chr1.1:63465331-63465350 MS.gene005414:CDS 25.0%
AATGACAACATTATGCTGAT+TGG - chr1.1:63465083-63465102 MS.gene005414:intron 30.0%
ACACCTTCCAAAATATAGTA+AGG - chr1.1:63465557-63465576 MS.gene005414:intron 30.0%
AGTTGTAAAATAGGAAGACA+CGG - chr1.1:63464611-63464630 MS.gene005414:CDS 30.0%
ATTTATAAGGAATGAAACGC+GGG - chr1.1:63464497-63464516 MS.gene005414:CDS 30.0%
CAAACATAGAGTTGAATTCA+GGG - chr1.1:63464037-63464056 MS.gene005414:CDS 30.0%
CAACAGCAAATAGAGTAAAA+TGG - chr1.1:63466247-63466266 MS.gene005414:CDS 30.0%
CATTCCACAATTGTCAAATT+AGG - chr1.1:63466022-63466041 MS.gene005414:CDS 30.0%
CCAATGTTATTGAGATGATA+AGG - chr1.1:63464357-63464376 MS.gene005414:CDS 30.0%
CCTTATCATCTCAATAACAT+TGG + chr1.1:63464360-63464379 None:intergenic 30.0%
CTATAAATCACAATCGTTGT+TGG + chr1.1:63465630-63465649 None:intergenic 30.0%
GATAAGTACAAAACCTTCTT+GGG - chr1.1:63466072-63466091 MS.gene005414:CDS 30.0%
GTAAACTTTGATGCTTCATT+TGG + chr1.1:63466297-63466316 None:intergenic 30.0%
GTTGAACTAATAACGAAAGT+TGG - chr1.1:63465245-63465264 MS.gene005414:CDS 30.0%
TAATAGGGTTGAACATGAAA+AGG - chr1.1:63464582-63464601 MS.gene005414:CDS 30.0%
TATTTAAGCCTTCAAGTGTA+CGG + chr1.1:63464211-63464230 None:intergenic 30.0%
TCAAACATAGAGTTGAATTC+AGG - chr1.1:63464036-63464055 MS.gene005414:CDS 30.0%
TCATGCATTGAAAACCAATT+TGG + chr1.1:63464879-63464898 None:intergenic 30.0%
TGATAAGTACAAAACCTTCT+TGG - chr1.1:63466071-63466090 MS.gene005414:CDS 30.0%
TTCAGTAAAGTTCAATCTTG+TGG - chr1.1:63464923-63464942 MS.gene005414:intron 30.0%
! ACCATGAACCGTTTTATATA+CGG + chr1.1:63464147-63464166 None:intergenic 30.0%
! CTCTTGAATCTTTTAAATCC+AGG - chr1.1:63465670-63465689 MS.gene005414:intron 30.0%
! GTGTTTAAAATTAGTTGCCA+CGG - chr1.1:63465484-63465503 MS.gene005414:CDS 30.0%
! GTTTTGTACTTATCAACAAC+AGG + chr1.1:63466066-63466085 None:intergenic 30.0%
! TATGGAGAGTATGAGAATTA+TGG - chr1.1:63466213-63466232 MS.gene005414:CDS 30.0%
! TTTGTTATCACATGATAACC+AGG + chr1.1:63466273-63466292 None:intergenic 30.0%
!! AAAGCGTCCTTACTATATTT+TGG + chr1.1:63465567-63465586 None:intergenic 30.0%
!! CATGGTGATGAAAACTTTTA+TGG - chr1.1:63466122-63466141 MS.gene005414:CDS 30.0%
!!! AAATTCCAGTGTTTTGGAAT+GGG + chr1.1:63466002-63466021 None:intergenic 30.0%
!!! ATTGGTTTTCAATGCATGAA+AGG - chr1.1:63464880-63464899 MS.gene005414:intron 30.0%
AAAATTAGTTGCCACGGAAA+TGG - chr1.1:63465490-63465509 MS.gene005414:CDS 35.0%
AAGAAGGGTCATTTCCAAAT+TGG - chr1.1:63464862-63464881 MS.gene005414:intron 35.0%
AGCCATGTTTGTACATCATT+TGG + chr1.1:63464254-63464273 None:intergenic 35.0%
AGTAAAGTTCAATCTTGTGG+TGG - chr1.1:63464926-63464945 MS.gene005414:intron 35.0%
ATAACCTTCCAAAATACTGC+TGG - chr1.1:63465724-63465743 MS.gene005414:intron 35.0%
CACCAAATGATGTACAAACA+TGG - chr1.1:63464249-63464268 MS.gene005414:CDS 35.0%
GCTCAAGACACATTGTATTA+TGG - chr1.1:63466195-63466214 MS.gene005414:CDS 35.0%
GTGATGCTAATATAAGCTTC+TGG - chr1.1:63464818-63464837 MS.gene005414:intron 35.0%
GTTGTAAAATAGGAAGACAC+GGG - chr1.1:63464612-63464631 MS.gene005414:CDS 35.0%
TCCGTATATAAAACGGTTCA+TGG - chr1.1:63464143-63464162 MS.gene005414:CDS 35.0%
! AACATTATGCTGATTGGTGA+CGG - chr1.1:63465089-63465108 MS.gene005414:intron 35.0%
! CATGGTAAGAGCTTCTTTTA+AGG + chr1.1:63464081-63464100 None:intergenic 35.0%
! CATTTTTGCAAGAAAGCCTT+TGG - chr1.1:63465936-63465955 MS.gene005414:intron 35.0%
! GGAATGAAATTCCAGTGTTT+TGG + chr1.1:63466008-63466027 None:intergenic 35.0%
!! ACAAGTTCTAGAAGTGTTCA+AGG - chr1.1:63465131-63465150 MS.gene005414:intron 35.0%
!! CGTCCTTACTATATTTTGGA+AGG + chr1.1:63465563-63465582 None:intergenic 35.0%
!!! CTTTTAAATCCAGGCATTGA+TGG - chr1.1:63465679-63465698 MS.gene005414:intron 35.0%
!!! GAAATTCCAGTGTTTTGGAA+TGG + chr1.1:63466003-63466022 None:intergenic 35.0%
AAATGAAGTCCATCAATGCC+TGG + chr1.1:63465691-63465710 None:intergenic 40.0%
AATCTTGTGGTGGCAAAAGA+TGG - chr1.1:63464936-63464955 MS.gene005414:intron 40.0%
CACTTGCAGAAACAGAAGAA+GGG - chr1.1:63464847-63464866 MS.gene005414:intron 40.0%
CAGCCCTAATTTGACAATTG+TGG + chr1.1:63466029-63466048 None:intergenic 40.0%
GAGTATGAGAATTATGGACC+TGG - chr1.1:63466219-63466238 MS.gene005414:CDS 40.0%
GCAAATAGAGTAAAATGGCC+TGG - chr1.1:63466252-63466271 MS.gene005414:CDS 40.0%
GCAACAATACTCAAGAGTCA+TGG - chr1.1:63466104-63466123 MS.gene005414:CDS 40.0%
GTTGCCAAAGATGAAGTCTA+CGG + chr1.1:63465890-63465909 None:intergenic 40.0%
TACCGACAATGCTTCATCTA+TGG - chr1.1:63465862-63465881 MS.gene005414:intron 40.0%
TCACTTGCAGAAACAGAAGA+AGG - chr1.1:63464846-63464865 MS.gene005414:intron 40.0%
TGTTGGACAATGACACATGT+TGG + chr1.1:63465613-63465632 None:intergenic 40.0%
TTTGCAAGAAAGCCTTTGGA+TGG - chr1.1:63465940-63465959 MS.gene005414:intron 40.0%
! ACTCTTGAGTATTGTTGCCA+TGG + chr1.1:63466102-63466121 None:intergenic 40.0%
! GTAAGGACGCTTTAGATTGA+AGG - chr1.1:63465574-63465593 MS.gene005414:intron 40.0%
! TACCATGCAAAAAGAAGCAC+AGG - chr1.1:63464094-63464113 MS.gene005414:CDS 40.0%
! TTCCTGTGCTTCTTTTTGCA+TGG + chr1.1:63464099-63464118 None:intergenic 40.0%
!! ACTACTGTGCCATTTACATC+TGG - chr1.1:63466357-63466376 MS.gene005414:CDS 40.0%
!! AGTTCTAGAAGTGTTCAAGG+TGG - chr1.1:63465134-63465153 MS.gene005414:intron 40.0%
!! CTATTTGCTGTTGATGAACC+AGG + chr1.1:63466240-63466259 None:intergenic 40.0%
!! TATAAAGAGCACCATTTCCG+TGG + chr1.1:63465504-63465523 None:intergenic 40.0%
!! TGCCATAGATGAAGCATTGT+CGG + chr1.1:63465867-63465886 None:intergenic 40.0%
AATACTGCTGGTCCTCACAA+AGG - chr1.1:63465736-63465755 MS.gene005414:intron 45.0%
AGTACAAAACCTTCTTGGGC+AGG - chr1.1:63466076-63466095 MS.gene005414:CDS 45.0%
CAGATCTCTCTGTCTTCTAC+CGG - chr1.1:63465785-63465804 MS.gene005414:intron 45.0%
CATCTCAACCGTACACTTGA+AGG - chr1.1:63464200-63464219 MS.gene005414:CDS 45.0%
CTTCTACCGGTGTGCTATAT+CGG - chr1.1:63465798-63465817 MS.gene005414:intron 45.0%
GCATCAAAGTTTACGGTTGC+TGG - chr1.1:63466303-63466322 MS.gene005414:CDS 45.0%
GTAGAAGACAGAGAGATCTG+AGG + chr1.1:63465785-63465804 None:intergenic 45.0%
TGCTGTTGCAGAGCTATAAG+TGG + chr1.1:63465165-63465184 None:intergenic 45.0%
TTCTACCGGTGTGCTATATC+GGG - chr1.1:63465799-63465818 MS.gene005414:intron 45.0%
! ACTTATAGCTCTGCAACAGC+AGG - chr1.1:63465164-63465183 MS.gene005414:intron 45.0%
! ATGTTAGCTTGGCCATCCAA+AGG + chr1.1:63465955-63465974 None:intergenic 45.0%
! TGTGAGGACCAGCAGTATTT+TGG + chr1.1:63465735-63465754 None:intergenic 45.0%
!! AGGACCAGCAGTATTTTGGA+AGG + chr1.1:63465731-63465750 None:intergenic 45.0%
CGAAAGTTGGCGACTCTAGT+AGG - chr1.1:63465258-63465277 MS.gene005414:CDS 50.0%
GATAGCCCGATATAGCACAC+CGG + chr1.1:63465807-63465826 None:intergenic 50.0%
GCAAAATCAGTGTCACCCCA+TGG + chr1.1:63466177-63466196 None:intergenic 50.0%
GCTAACATGATCACTGCCCA+AGG - chr1.1:63465967-63465986 MS.gene005414:intron 50.0%
GGCACCGTAGACTTCATCTT+TGG - chr1.1:63465883-63465902 MS.gene005414:intron 50.0%
GGGCAGTGATCATGTTAGCT+TGG + chr1.1:63465966-63465985 None:intergenic 50.0%
GGGCTATCAAGACACTCTGA+TGG - chr1.1:63465819-63465838 MS.gene005414:intron 50.0%
GTAGTGCTAGCCAACCATGT+TGG + chr1.1:63466342-63466361 None:intergenic 50.0%
GTGGTGGCAAAAGATGGTTC+TGG - chr1.1:63464942-63464961 MS.gene005414:intron 50.0%
TCCTCACAAAGGTCAAGCTG+TGG - chr1.1:63465747-63465766 MS.gene005414:intron 50.0%
! CAGAGAGATCTGAGGCTGAT+CGG + chr1.1:63465777-63465796 None:intergenic 50.0%
AAACCTTCTTGGGCAGGCCA+TGG - chr1.1:63466082-63466101 MS.gene005414:CDS 55.0%
ACCCCATGGAGACCAACCTA+GGG + chr1.1:63466163-63466182 None:intergenic 55.0%
ATGATCACTGCCCAAGGTCG+TGG - chr1.1:63465973-63465992 MS.gene005414:intron 55.0%
CATCTTTGGCAACGCTGCAG+TGG - chr1.1:63465897-63465916 MS.gene005414:intron 55.0%
CCAACCATGTTGGTCCAGCA+AGG + chr1.1:63466332-63466351 None:intergenic 55.0%
CCTTGCTGGACCAACATGGT+TGG - chr1.1:63466329-63466348 MS.gene005414:CDS 55.0%
CTTTAGTGAGCCCCCTAGGT+TGG - chr1.1:63466148-63466167 MS.gene005414:CDS 55.0%
GACACTTTAGTGAGCCCCCT+AGG - chr1.1:63466144-63466163 MS.gene005414:CDS 55.0%
GACTCCTTGCTGGACCAACA+TGG - chr1.1:63466325-63466344 MS.gene005414:CDS 55.0%
GCCACAGCTTGACCTTTGTG+AGG + chr1.1:63465751-63465770 None:intergenic 55.0%
GCGACTCTAGTAGGCGAAGA+TGG - chr1.1:63465267-63465286 MS.gene005414:CDS 55.0%
GGCGACCCATTCCAAAACAC+TGG - chr1.1:63465994-63466013 MS.gene005414:CDS 55.0%
ACGGTTGCTGGACTCCTTGC+TGG - chr1.1:63466315-63466334 MS.gene005414:CDS 60.0%
CACCCCATGGAGACCAACCT+AGG + chr1.1:63466164-63466183 None:intergenic 60.0%
CCCATGGAGACCAACCTAGG+GGG + chr1.1:63466161-63466180 None:intergenic 60.0%
CCCCATGGAGACCAACCTAG+GGG + chr1.1:63466162-63466181 None:intergenic 60.0%
GAATGGGTCGCCACGACCTT+GGG + chr1.1:63465986-63466005 None:intergenic 60.0%
TTGCCATGGCCTGCCCAAGA+AGG + chr1.1:63466088-63466107 None:intergenic 60.0%
!! CCCCCTAGGTTGGTCTCCAT+GGG - chr1.1:63466158-63466177 MS.gene005414:CDS 60.0%
!! CCCCTAGGTTGGTCTCCATG+GGG - chr1.1:63466159-63466178 MS.gene005414:CDS 60.0%
GGAATGGGTCGCCACGACCT+TGG + chr1.1:63465987-63466006 None:intergenic 65.0%
!! GCCCCCTAGGTTGGTCTCCA+TGG - chr1.1:63466157-63466176 MS.gene005414:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 63464017 63466386 63464017 ID=MS.gene005414
chr1.1 mRNA 63464017 63466386 63464017 ID=MS.gene005414.t1;Parent=MS.gene005414
chr1.1 exon 63465981 63466386 63465981 ID=MS.gene005414.t1.exon1;Parent=MS.gene005414.t1
chr1.1 CDS 63465981 63466386 63465981 ID=cds.MS.gene005414.t1;Parent=MS.gene005414.t1
chr1.1 exon 63465218 63465547 63465218 ID=MS.gene005414.t1.exon2;Parent=MS.gene005414.t1
chr1.1 CDS 63465218 63465547 63465218 ID=cds.MS.gene005414.t1;Parent=MS.gene005414.t1
chr1.1 exon 63464017 63464711 63464017 ID=MS.gene005414.t1.exon3;Parent=MS.gene005414.t1
chr1.1 CDS 63464017 63464711 63464017 ID=cds.MS.gene005414.t1;Parent=MS.gene005414.t1
Gene Sequence

>MS.gene005414

ATGAACAATCATTTCAATATCAAACATAGAGTTGAATTCAGGGAAATGCTTGTTCAATTAGCCTTAAAAGAAGCTCTTACCATGCAAAAAGAAGCACAGGAAAATTCTCAACAACAACAAAACTCATCCGTATATAAAACGGTTCATGGTGATTGTTTGAAGCTATTTGAAATCACAAATTTTCATCTCAACCGTACACTTGAAGGCTTAAATAATGCAAGCAAAAATTGTTCACCAAATGATGTACAAACATGGCTCACAACTTCTCTCACAAATATTGAAACATGTAAAAGTGGAGCTTTAGAACTCAATGCTCAAGATTTCAATTTCATTATGCAAACCAATGTTATTGAGATGATAAGGAACATCTTAGCCATCAATATGCATTTCTTGAAACATAACAAAGGTAATAACAATTTTTTATATTTTTCTCTTTAAAATATTAAGTATTGTCTCCGCTAAAAATTATTGAATAACTTTATTTATAAGGAATGAAACGCGGGTGTGAAAGATAAATTATCGAATGTTTATTTGGTCACATACATAAAAATAAATTATCGAATGTTAATAGGGTTGAACATGAAAAGGAAAAAAAGTTGTAAAATAGGAAGACACGGGAGCAATTATATATAATTATATACTTTGTAGATGTTGAAGTATATATCTTCAATTTTTTAGGTATATAATGATAAAATTTTGTATTCTCCAAATTATTAGTTAATGATAATATTGATGGCATCATACTTATAGCTTATGTACTTAGTACTTACCATATAAATATGTATAGTTATAACTTATATGGTGATGCTAATATAAGCTTCTGGTTCTGTCACTTGCAGAAACAGAAGAAGGGTCATTTCCAAATTGGTTTTCAATGCATGAAAGGAAGCTTTTGCAGTCTAAGTCTTCAGTAAAGTTCAATCTTGTGGTGGCAAAAGATGGTTCTGGACAGTACAAGACTGTGCAAGCTGCTTTAAACGCTGCTGCTAAGAGAAAATATAAGACAAGGTTTGTGATACATGTTAAGAAAGGTGTTTATAAAGAGAACATTGAGGTTGCTGTTCACAATGACAACATTATGCTGATTGGTGACGGAATGCAAAATACCATAATAACAAGTTCTAGAAGTGTTCAAGGTGGTTATACCACTTATAGCTCTGCAACAGCAGGTGAGTTATATTTCATTTCCTGTTTTATGTTCTTGTTATAAGAGTCACTACTAGAAAAAGTTGAACTAATAACGAAAGTTGGCGACTCTAGTAGGCGAAGATGGAATAGTGATGAATTTAATGTTTTTCGTTCTCCAAATTTTCTTCACTGATTTAGTTTTTTCTAGGTGTCTTTGTGTACAAGTAAATTTCATGCACCTACTATTGAACATAAAAGATGTGCGAAAAAAAATTGAGTGAAAATCTACAATCATTAAATGAGCTTTTGAAACTTAATTTTAAAGCCCTAATTAAATCAGTGTTTAAAATTAGTTGCCACGGAAATGGTGCTCTTTATATCAGATGTATATATGATATTCATAGTCGTCATAACACCTTCCAAAATATAGTAAGGACGCTTTAGATTGAAGGTGTATTTGTGTATCCAACATGTGTCATTGTCCAACAACGATTGTGATTTATAGTTTCTAATAGTTACATATTTCTCTTGAATCTTTTAAATCCAGGCATTGATGGACTTCATTTCATTGCACGAGACATAACCTTCCAAAATACTGCTGGTCCTCACAAAGGTCAAGCTGTGGCGCTCCGATCAGCCTCAGATCTCTCTGTCTTCTACCGGTGTGCTATATCGGGCTATCAAGACACTCTGATGGCTCATGCACAACGTCAATTCTACCGACAATGCTTCATCTATGGCACCGTAGACTTCATCTTTGGCAACGCTGCAGTGGTATTCCAAAATTGTAACATTTTTGCAAGAAAGCCTTTGGATGGCCAAGCTAACATGATCACTGCCCAAGGTCGTGGCGACCCATTCCAAAACACTGGAATTTCATTCCACAATTGTCAAATTAGGGCTGCATCAGATCTAAAGCCTGTTGTTGATAAGTACAAAACCTTCTTGGGCAGGCCATGGCAACAATACTCAAGAGTCATGGTGATGAAAACTTTTATGGACACTTTAGTGAGCCCCCTAGGTTGGTCTCCATGGGGTGACACTGATTTTGCTCAAGACACATTGTATTATGGAGAGTATGAGAATTATGGACCTGGTTCATCAACAGCAAATAGAGTAAAATGGCCTGGTTATCATGTGATAACAAACCCAAATGAAGCATCAAAGTTTACGGTTGCTGGACTCCTTGCTGGACCAACATGGTTGGCTAGCACTACTGTGCCATTTACATCTGGTCTTTGA
Protein sequence

>MS.gene005414.t1

MNNHFNIKHRVEFREMLVQLALKEALTMQKEAQENSQQQQNSSVYKTVHGDCLKLFEITNFHLNRTLEGLNNASKNCSPNDVQTWLTTSLTNIETCKSGALELNAQDFNFIMQTNVIEMIRNILAINMHFLKHNKETEEGSFPNWFSMHERKLLQSKSSVKFNLVVAKDGSGQYKTVQAALNAAAKRKYKTRFVIHVKKGVYKENIEVAVHNDNIMLIGDGMQNTIITSSRSVQGGYTTYSSATAGIDGLHFIARDITFQNTAGPHKGQAVALRSASDLSVFYRCAISGYQDTLMAHAQRQFYRQCFIYGTVDFIFGNAAVVFQNCNIFARKPLDGQANMITAQGRGDPFQNTGISFHNCQIRAASDLKPVVDKYKTFLGRPWQQYSRVMVMKTFMDTLVSPLGWSPWGDTDFAQDTLYYGEYENYGPGSSTANRVKWPGYHVITNPNEASKFTVAGLLAGPTWLASTTVPFTSGL