AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene48248

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene48248.t1 MTR_4g025690 97.342 489 13 0 1 489 25 513 0.0 994
MS.gene48248.t1 MTR_4g025730 74.338 491 117 5 1 489 26 509 0.0 755
MS.gene48248.t1 MTR_8g104655 50.778 514 219 10 5 489 33 541 0.0 518
MS.gene48248.t1 MTR_3g033690 53.600 500 213 10 4 489 32 526 7.69e-179 512
MS.gene48248.t1 MTR_4g035980 51.485 505 225 9 4 489 36 539 1.31e-177 509
MS.gene48248.t1 MTR_3g008640 53.493 501 213 11 4 489 32 527 1.37e-177 509
MS.gene48248.t1 MTR_3g008720 53.493 501 213 11 4 489 32 527 4.07e-177 508
MS.gene48248.t1 MTR_7g053360 53.293 501 214 11 4 489 32 527 4.47e-176 505
MS.gene48248.t1 MTR_3g008700 52.883 503 217 11 2 489 30 527 1.20e-175 504
MS.gene48248.t1 MTR_7g108905 49.012 506 228 11 8 485 49 552 1.13e-160 467
MS.gene48248.t1 MTR_8g104645 62.059 340 120 4 159 489 33 372 3.79e-155 446
MS.gene48248.t1 MTR_4g025670 52.668 431 185 8 72 489 65 489 1.20e-153 446
MS.gene48248.t1 MTR_4g087980 51.242 443 191 6 66 489 80 516 1.57e-152 445
MS.gene48248.t1 MTR_8g104580 45.419 513 215 11 5 489 25 500 2.34e-152 444
MS.gene48248.t1 MTR_1g008140 43.916 526 247 10 8 489 86 607 3.33e-148 437
MS.gene48248.t1 MTR_8g023310 46.183 524 242 10 4 489 68 589 4.96e-148 436
MS.gene48248.t1 MTR_2g044880 50.112 447 203 5 61 489 81 525 2.23e-147 432
MS.gene48248.t1 MTR_7g050980 47.656 512 230 13 6 489 54 555 1.58e-146 431
MS.gene48248.t1 MTR_1g083520 48.622 508 216 13 8 485 32 524 1.73e-145 427
MS.gene48248.t1 MTR_3g091380 44.359 523 243 10 8 489 82 597 1.90e-145 429
MS.gene48248.t1 MTR_7g050870 51.678 447 192 9 63 489 112 554 2.21e-145 428
MS.gene48248.t1 MTR_1g088020 47.753 534 217 17 8 489 32 555 7.42e-142 419
MS.gene48248.t1 MTR_7g112580 48.904 456 188 10 66 489 100 542 7.02e-139 411
MS.gene48248.t1 MTR_1g088225 47.566 534 216 18 8 489 32 553 9.19e-139 411
MS.gene48248.t1 MTR_7g108890 46.516 531 227 15 8 489 40 562 1.44e-138 410
MS.gene48248.t1 MTR_1g054880 46.821 519 221 14 24 489 42 558 1.02e-137 408
MS.gene48248.t1 MTR_7g050950 49.220 449 199 10 63 489 112 553 5.77e-137 406
MS.gene48248.t1 MTR_7g108900 45.403 533 230 15 8 489 38 560 2.35e-135 402
MS.gene48248.t1 MTR_4g087970 46.067 445 213 5 67 489 78 517 3.49e-133 395
MS.gene48248.t1 MTR_8g042910 47.173 513 207 14 32 489 109 612 4.37e-133 398
MS.gene48248.t1 MTR_8g042900 44.078 515 250 13 4 489 76 581 3.64e-132 395
MS.gene48248.t1 MTR_7g108875 44.361 532 237 13 8 489 42 564 5.43e-132 394
MS.gene48248.t1 MTR_3g010780 43.827 486 233 11 34 489 99 574 1.57e-127 383
MS.gene48248.t1 MTR_2g044810 42.000 500 268 9 1 485 38 530 2.29e-124 373
MS.gene48248.t1 MTR_4g124550 42.218 514 258 12 4 484 81 588 5.26e-123 372
MS.gene48248.t1 MTR_0458s0030 65.019 263 90 2 228 489 53 314 1.81e-122 360
MS.gene48248.t1 MTR_1g088040 65.019 263 90 2 228 489 53 314 1.81e-122 360
MS.gene48248.t1 MTR_3g010770 57.643 314 126 4 182 489 263 575 6.36e-122 369
MS.gene48248.t1 MTR_8g023150 42.248 516 258 12 4 489 77 582 6.67e-120 363
MS.gene48248.t1 MTR_4g124520 47.030 404 188 10 100 485 122 517 1.28e-119 360
MS.gene48248.t1 MTR_0618s0020 67.544 228 73 1 263 489 1 228 4.50e-116 341
MS.gene48248.t1 MTR_1g086190 40.041 487 252 11 37 485 75 559 6.63e-112 342
MS.gene48248.t1 MTR_1g086210 40.781 461 227 10 70 485 106 565 6.41e-111 340
MS.gene48248.t1 MTR_8g093460 39.423 520 262 15 2 483 41 545 1.31e-103 321
MS.gene48248.t1 MTR_2g044660 48.632 329 161 5 159 484 304 627 1.11e-102 320
MS.gene48248.t1 MTR_1g083510 37.687 536 272 16 4 487 56 581 3.87e-102 318
MS.gene48248.t1 MTR_3g095920 39.458 517 266 14 1 478 45 553 1.82e-101 315
MS.gene48248.t1 MTR_7g110490 39.316 468 227 12 70 484 106 569 1.21e-100 313
MS.gene48248.t1 MTR_7g110510 39.316 468 227 12 70 484 106 569 1.21e-100 313
MS.gene48248.t1 MTR_7g112590 37.103 504 262 13 32 486 83 580 1.39e-100 314
MS.gene48248.t1 MTR_7g110440 37.607 468 235 10 70 484 106 569 4.52e-100 312
MS.gene48248.t1 MTR_7g110560 38.936 470 251 11 48 485 80 545 4.58e-99 309
MS.gene48248.t1 MTR_1g083470 35.902 532 274 15 1 485 55 566 5.99e-99 309
MS.gene48248.t1 MTR_1g083500 35.902 532 274 15 1 485 55 566 5.99e-99 309
MS.gene48248.t1 MTR_1g083490 35.551 526 292 15 1 489 60 575 1.03e-96 304
MS.gene48248.t1 MTR_4g005170 38.274 452 244 12 66 485 123 571 1.53e-96 305
MS.gene48248.t1 MTR_4g005180 37.229 462 235 12 66 485 105 553 1.47e-94 298
MS.gene48248.t1 MTR_4g120290 36.590 522 279 15 4 485 59 568 5.86e-93 294
MS.gene48248.t1 MTR_2g044810 53.846 247 112 2 240 485 216 461 2.13e-92 289
MS.gene48248.t1 MTR_2g436040 33.136 507 309 11 4 486 43 543 5.42e-92 292
MS.gene48248.t1 MTR_4g120280 36.052 466 244 10 65 486 114 569 8.25e-92 291
MS.gene48248.t1 MTR_8g088610 43.976 332 177 7 161 486 45 373 9.89e-91 281
MS.gene48248.t1 MTR_2g436050 36.170 470 268 11 48 486 93 561 8.27e-88 280
MS.gene48248.t1 MTR_7g110420 36.268 477 243 12 70 489 106 578 6.51e-87 278
MS.gene48248.t1 MTR_0458s0010 39.024 533 228 20 8 489 32 518 8.88e-86 273
MS.gene48248.t1 MTR_5g083620 41.716 338 181 7 159 485 20 352 8.89e-86 268
MS.gene48248.t1 MTR_7g110430 33.191 467 223 10 70 484 106 535 1.81e-80 260
MS.gene48248.t1 MTR_2g105560 40.385 312 171 5 181 489 40 339 9.92e-74 236
MS.gene48248.t1 MTR_7g107180 40.317 315 175 5 178 489 3 307 1.68e-72 232
MS.gene48248.t1 MTR_6g024165 39.875 321 168 8 169 478 28 334 2.35e-67 220
MS.gene48248.t1 MTR_2g039530 42.763 304 157 6 158 456 28 319 2.82e-64 212
MS.gene48248.t1 MTR_7g111560 31.603 443 272 13 69 487 119 554 1.61e-62 213
MS.gene48248.t1 MTR_1g086540 36.646 322 178 6 169 478 37 344 2.66e-57 194
MS.gene48248.t1 MTR_8g102380 38.158 304 159 6 190 478 88 377 1.74e-55 190
MS.gene48248.t1 MTR_6g088810 39.145 304 154 7 190 478 90 377 7.25e-55 188
MS.gene48248.t1 MTR_6g012800 34.356 326 179 9 182 487 6 316 1.43e-52 180
MS.gene48248.t1 MTR_6g042660 35.764 288 157 7 171 451 30 296 7.85e-49 171
MS.gene48248.t1 MTR_7g092780 32.132 333 195 7 159 478 73 387 2.90e-47 168
MS.gene48248.t1 MTR_8g102380 40.726 248 121 6 190 422 88 324 3.52e-47 166
MS.gene48248.t1 MTR_7g011530 33.230 322 184 8 184 487 8 316 5.70e-47 166
MS.gene48248.t1 MTR_5g083590 32.143 308 155 5 182 485 7 264 2.93e-46 162
MS.gene48248.t1 MTR_5g095490 33.876 307 171 6 188 478 67 357 5.76e-45 161
MS.gene48248.t1 MTR_6g042690 34.859 284 152 8 182 451 39 303 3.95e-44 158
MS.gene48248.t1 MTR_4g124740 34.091 308 170 7 182 478 54 339 1.41e-43 157
MS.gene48248.t1 MTR_2g033970 32.390 318 191 6 172 480 46 348 3.69e-43 156
MS.gene48248.t1 MTR_7g102600 32.459 305 184 6 184 478 101 393 8.43e-43 156
MS.gene48248.t1 MTR_1g033050 32.982 285 168 5 177 451 13 284 1.26e-42 154
MS.gene48248.t1 MTR_5g012600 31.529 314 187 7 182 481 63 362 2.31e-40 149
MS.gene48248.t1 MTR_5g088300 32.215 298 183 5 182 478 37 316 6.52e-39 144
MS.gene48248.t1 MTR_5g093970 33.115 305 178 9 182 478 43 329 8.92e-39 144
MS.gene48248.t1 MTR_2g436600 31.348 319 184 9 172 480 45 338 1.68e-37 140
MS.gene48248.t1 MTR_2g073390 30.247 324 203 8 169 483 58 367 2.86e-37 140
MS.gene48248.t1 MTR_4g074290 31.193 327 196 9 169 483 58 367 6.02e-36 137
MS.gene48248.t1 MTR_4g051810 32.441 299 182 6 182 478 37 317 1.22e-35 135
MS.gene48248.t1 MTR_5g088280 31.229 301 188 5 179 478 36 318 1.86e-35 135
MS.gene48248.t1 MTR_5g088290 31.229 301 183 7 182 478 48 328 3.05e-34 132
MS.gene48248.t1 MTR_0009s0350 29.448 326 203 9 169 483 58 367 2.33e-32 127
MS.gene48248.t1 MTR_0009s0340 29.448 326 203 9 169 483 58 367 2.33e-32 127
MS.gene48248.t1 MTR_8g036225 27.302 315 200 6 182 486 33 328 4.21e-30 120
MS.gene48248.t1 MTR_6g025590 38.122 181 102 3 169 339 36 216 1.76e-29 116
MS.gene48248.t1 MTR_2g436070 27.957 279 157 10 4 251 56 321 7.36e-20 91.7
MS.gene48248.t1 MTR_0408s0030 41.414 99 45 3 355 451 36 123 4.48e-16 75.9
MS.gene48248.t1 MTR_4g130790 28.112 249 147 8 185 420 25 254 5.20e-16 78.6
MS.gene48248.t1 MTR_6g024200 34.375 160 84 5 320 478 137 276 2.39e-15 76.6
MS.gene48248.t1 MTR_7g102580 40.659 91 44 2 249 334 68 153 2.66e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene48248.t1 AT2G45220 67.213 488 154 4 3 489 29 511 0.0 699
MS.gene48248.t1 AT5G51490 51.190 504 221 9 7 489 37 536 6.65e-177 508
MS.gene48248.t1 AT4G00190 53.388 487 202 9 8 489 8 474 2.21e-172 494
MS.gene48248.t1 AT5G51500 50.895 503 224 10 7 489 41 540 6.59e-172 495
MS.gene48248.t1 AT3G47400 49.414 512 234 9 3 489 83 594 1.18e-171 496
MS.gene48248.t1 AT1G23200 48.113 530 214 13 8 489 38 554 8.26e-155 452
MS.gene48248.t1 AT3G49220 48.998 449 201 7 68 489 149 596 1.07e-146 433
MS.gene48248.t1 AT3G43270 48.857 481 214 8 39 489 47 525 1.65e-146 430
MS.gene48248.t1 AT3G49220 48.998 449 201 7 68 489 194 641 1.41e-145 431
MS.gene48248.t1 AT5G53370 44.031 511 253 8 8 489 79 585 1.67e-144 427
MS.gene48248.t1 AT5G53370 44.031 511 253 8 8 489 115 621 4.34e-144 427
MS.gene48248.t1 AT3G60730 47.629 464 201 8 62 487 58 517 4.42e-144 423
MS.gene48248.t1 AT3G14310 48.504 468 192 8 68 486 122 589 9.29e-144 425
MS.gene48248.t1 AT3G59010 49.471 473 207 8 39 489 66 528 1.00e-143 423
MS.gene48248.t1 AT1G53830 45.660 530 240 11 4 489 62 587 8.86e-142 420
MS.gene48248.t1 AT4G02320 47.253 455 213 10 60 489 66 518 1.45e-140 414
MS.gene48248.t1 AT1G11580 49.658 439 197 7 68 485 118 553 1.96e-138 410
MS.gene48248.t1 AT1G11580 49.658 439 197 7 68 485 139 574 3.09e-138 410
MS.gene48248.t1 AT4G33220 49.524 420 179 5 101 489 106 523 5.98e-137 405
MS.gene48248.t1 AT3G05620 49.231 455 187 11 67 489 99 541 3.84e-135 401
MS.gene48248.t1 AT4G33220 56.627 332 141 2 161 489 71 402 1.04e-134 395
MS.gene48248.t1 AT2G43050 48.843 432 189 10 75 489 100 516 2.84e-129 385
MS.gene48248.t1 AT4G02330 49.095 442 168 11 101 489 134 571 1.00e-128 386
MS.gene48248.t1 AT4G02300 45.169 445 212 10 69 486 90 529 3.36e-127 380
MS.gene48248.t1 AT1G02810 42.523 555 237 14 8 489 32 577 1.46e-125 378
MS.gene48248.t1 AT2G26450 42.623 488 242 13 20 484 134 606 2.13e-124 376
MS.gene48248.t1 AT2G47550 42.561 531 245 13 8 489 39 558 4.65e-123 371
MS.gene48248.t1 AT5G04960 41.683 511 255 13 4 487 68 562 8.07e-123 370
MS.gene48248.t1 AT5G20860 41.051 514 269 12 2 489 33 538 4.49e-122 367
MS.gene48248.t1 AT3G10710 42.495 513 247 13 4 489 70 561 1.13e-120 365
MS.gene48248.t1 AT3G10720 41.882 542 246 16 8 489 83 615 1.97e-120 366
MS.gene48248.t1 AT1G53840 40.385 520 259 12 4 483 73 581 1.37e-119 363
MS.gene48248.t1 AT3G05610 41.501 453 233 10 66 489 116 565 1.35e-118 363
MS.gene48248.t1 AT2G26440 40.116 516 260 12 7 485 40 543 2.75e-118 358
MS.gene48248.t1 AT3G06830 39.425 487 255 11 39 489 86 568 1.39e-116 354
MS.gene48248.t1 AT5G49180 41.598 488 247 14 34 485 81 566 2.97e-116 353
MS.gene48248.t1 AT5G04970 41.328 542 249 17 8 489 88 620 1.60e-115 353
MS.gene48248.t1 AT5G27870 41.348 445 235 8 66 485 115 558 4.16e-115 355
MS.gene48248.t1 AT4G33230 42.576 458 226 11 60 484 148 601 2.36e-112 345
MS.gene48248.t1 AT3G14300 39.567 508 260 12 8 479 463 959 1.61e-110 350
MS.gene48248.t1 AT3G10720 60.385 260 101 2 231 489 1 259 1.94e-110 328
MS.gene48248.t1 AT4G15980 47.564 349 174 5 147 487 353 700 1.03e-106 333
MS.gene48248.t1 AT4G15980 47.564 349 174 5 147 487 363 710 1.72e-106 333
MS.gene48248.t1 AT3G27980 42.893 394 216 5 103 489 106 497 4.29e-105 323
MS.gene48248.t1 AT1G11590 43.000 400 215 5 101 489 127 524 9.13e-102 315
MS.gene48248.t1 AT4G03930 42.462 398 216 6 103 489 129 524 2.35e-101 314
MS.gene48248.t1 AT5G64640 39.265 517 269 16 3 481 92 601 1.11e-99 312
MS.gene48248.t1 AT5G09760 38.835 515 263 17 3 477 44 546 1.21e-98 308
MS.gene48248.t1 AT5G20860 37.931 493 244 12 2 468 33 489 2.04e-98 306
MS.gene48248.t1 AT5G09760 38.641 515 264 16 3 477 70 572 2.44e-98 308
MS.gene48248.t1 AT2G47030 44.540 348 173 6 160 489 243 588 1.03e-85 275
MS.gene48248.t1 AT2G47040 43.768 345 177 6 160 489 253 595 3.42e-82 266
MS.gene48248.t1 AT3G62170 41.737 357 180 6 154 484 229 583 4.33e-82 266
MS.gene48248.t1 AT1G11370 48.996 249 124 2 174 419 38 286 1.24e-80 252
MS.gene48248.t1 AT5G19730 37.864 309 165 6 183 478 87 381 1.15e-54 188
MS.gene48248.t1 AT3G17060 33.229 319 185 7 172 479 36 337 2.58e-49 172
MS.gene48248.t1 AT1G05310 33.934 333 189 8 159 478 74 388 2.35e-48 171
MS.gene48248.t1 AT2G36700 33.444 302 182 4 184 478 44 333 5.89e-48 169
MS.gene48248.t1 AT3G29090 35.106 282 161 4 182 451 7 278 6.66e-48 168
MS.gene48248.t1 AT5G07430 31.351 370 228 8 119 478 2 355 8.26e-46 164
MS.gene48248.t1 AT2G21610 32.890 301 179 7 182 478 51 332 1.22e-45 163
MS.gene48248.t1 AT2G21610 32.890 301 179 7 182 478 56 337 1.50e-45 163
MS.gene48248.t1 AT2G36710 32.372 312 189 7 182 483 91 390 2.29e-44 161
MS.gene48248.t1 AT5G55590 33.739 329 190 8 164 478 64 378 3.88e-43 157
MS.gene48248.t1 AT5G07420 32.390 318 191 7 169 478 54 355 6.43e-43 156
MS.gene48248.t1 AT5G47500 30.699 329 191 7 164 478 52 357 3.39e-42 154
MS.gene48248.t1 AT5G18990 33.441 311 177 7 182 478 29 323 7.01e-42 152
MS.gene48248.t1 AT2G19150 33.754 317 179 9 182 485 41 339 2.70e-41 151
MS.gene48248.t1 AT3G24130 31.348 319 185 8 182 484 34 334 1.05e-40 149
MS.gene48248.t1 AT5G55590 35.165 273 152 7 164 422 64 325 4.19e-40 147
MS.gene48248.t1 AT1G44980 41.489 188 104 2 162 343 54 241 9.48e-40 144
MS.gene48248.t1 AT5G61680 31.646 316 190 8 173 478 59 358 9.89e-40 147
MS.gene48248.t1 AT1G69940 29.141 326 206 7 162 478 46 355 3.03e-38 143
MS.gene48248.t1 AT5G07410 29.141 326 206 7 162 478 46 355 2.37e-37 140
MS.gene48248.t1 AT5G26810 32.692 312 183 8 182 478 34 333 4.51e-37 139
MS.gene48248.t1 AT2G47280 32.476 311 178 8 182 478 35 327 1.41e-34 132
MS.gene48248.t1 AT3G49220 36.239 218 112 6 68 259 194 410 3.91e-34 133
MS.gene48248.t1 AT2G19150 34.921 252 140 7 182 422 41 279 5.32e-34 130

Find 99 sgRNAs with CRISPR-Local

Find 138 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTACGGTTGATTTCATATT+TGG 0.122126 4.2:-77435346 MS.gene48248:CDS
TTGCAAATATGTTACAATTT+TGG 0.131621 4.2:+77435305 None:intergenic
TACAAACAATGTAACATTTA+TGG 0.134217 4.2:-77435367 MS.gene48248:CDS
GATAAGTCTTAACAGAATTT+TGG 0.160141 4.2:+77435164 None:intergenic
GCATTTCTATTCACAATTCT+AGG 0.200545 4.2:-77435216 MS.gene48248:CDS
TACCTACCTTTGTTATTCTT+TGG 0.232922 4.2:+77436526 None:intergenic
GCATTAAGTACTTTATATTA+TGG 0.242821 4.2:-77435040 MS.gene48248:CDS
CCAAAGTTTAACTTCATTCA+TGG 0.264428 4.2:+77437134 None:intergenic
TGTTGTTGGAGATGGATTTA+TGG 0.279809 4.2:-77435536 MS.gene48248:CDS
TGGCTCAAGATATCACATTT+AGG 0.292215 4.2:-77435516 MS.gene48248:CDS
ACTGTATCAAATTTCATTGC+TGG 0.309927 4.2:-77434920 MS.gene48248:CDS
TTCACGTGAGTTACTACATT+TGG 0.320043 4.2:+77436948 None:intergenic
GTGATTGTGTTGACTTTGTT+TGG 0.331970 4.2:+77435274 None:intergenic
TGATTTCTTCAAACTTTCAT+TGG 0.341515 4.2:-77437025 MS.gene48248:CDS
GTAAATGGCACTTTGGTTGC+AGG 0.349440 4.2:+77434884 None:intergenic
ATCCATCTGGTTGGTTAGAA+TGG 0.351047 4.2:-77435075 MS.gene48248:CDS
AATTCTGTTAAGACTTATCT+TGG 0.359832 4.2:-77435160 MS.gene48248:CDS
AATTAAAGAGTAGATGTAAA+TGG 0.364262 4.2:+77434869 None:intergenic
CAAGCTGTTGCATTGCGTTC+CGG 0.373938 4.2:-77435469 MS.gene48248:CDS
GACCATGGAAGCAATATTCT+AGG 0.374299 4.2:-77435135 MS.gene48248:CDS
AAGGTGAAGGATTAGGTGTT+TGG 0.383741 4.2:+77437106 None:intergenic
CATGCAAACACTCTTTCATT+AGG 0.385373 4.2:-77436973 MS.gene48248:CDS
CAATGAACAAGTTGAGATAA+AGG 0.386142 4.2:-77436476 MS.gene48248:CDS
TTCTAGGGTTACCGCTGCTT+CGG 0.395543 4.2:-77435200 MS.gene48248:CDS
ATGAGTTTGTGTTGGTAAGT+AGG 0.401351 4.2:+77437060 None:intergenic
TGAGTTTGTGTTGGTAAGTA+GGG 0.405169 4.2:+77437061 None:intergenic
TAGCAATTTAGTAACATTGT+TGG 0.405337 4.2:+77436732 None:intergenic
CGCTGCTTCGGATTTGAAAC+CGG 0.416213 4.2:-77435188 MS.gene48248:CDS
AGCTTTGCATGTCTCAAGAT+TGG 0.416888 4.2:+77436801 None:intergenic
GGGAACCCATCTTTGTAGCT+AGG 0.418473 4.2:+77436670 None:intergenic
GATAGTTTGATTCATCCATC+TGG 0.426673 4.2:-77435088 MS.gene48248:CDS
GAATAGAAATGCCAGTGTTT+TGG 0.434967 4.2:+77435227 None:intergenic
GCAAAGAATATTATGTTGGT+TGG 0.435785 4.2:-77436454 MS.gene48248:CDS
TAGTCGCAAAAGACGGGTCC+GGG 0.445681 4.2:-77436585 MS.gene48248:CDS
ATTCTTTGGTATAGCATTCA+CGG 0.447221 4.2:+77436540 None:intergenic
CCATGAATGAAGTTAAACTT+TGG 0.447619 4.2:-77437134 MS.gene48248:CDS
ACTAACAGTTGTGTACTTCC+CGG 0.449602 4.2:+77436567 None:intergenic
AACGCAATGCAACAGCTTGA+TGG 0.450785 4.2:+77435473 None:intergenic
CATTTCTATTCACAATTCTA+GGG 0.450955 4.2:-77435215 MS.gene48248:CDS
TTTGCAGCTGTTGTTGGAGA+TGG 0.451928 4.2:-77435544 MS.gene48248:intron
CACCTGGCCTAACCCATGTT+GGG 0.479286 4.2:+77436650 None:intergenic
AATATTATGTTGGTTGGAGA+TGG 0.480645 4.2:-77436448 MS.gene48248:CDS
AATCTTGAGACATGCAAAGC+TGG 0.483667 4.2:-77436799 MS.gene48248:CDS
AAAGGCAAAGAATATTATGT+TGG 0.483951 4.2:-77436458 MS.gene48248:CDS
CCATTTGACACGGTTTCTTG+TGG 0.485738 4.2:+77434988 None:intergenic
GAGTATATGAACACTGGTCT+TGG 0.488203 4.2:-77435016 MS.gene48248:CDS
TTGTGTTGACTTTGTTTGGA+GGG 0.490707 4.2:+77435278 None:intergenic
CAAGAACCTAGCTACAAAGA+TGG 0.493394 4.2:-77436676 MS.gene48248:CDS
ATTTCATTGCTGGAAATGCT+TGG 0.496886 4.2:-77434910 MS.gene48248:CDS
TACACACAAGGTGAAGGATT+AGG 0.498523 4.2:+77437099 None:intergenic
TAAATTGCTAAGCAACACTT+TGG 0.498951 4.2:-77436719 MS.gene48248:CDS
TGTAGTAGCTTTCTATCACC+TGG 0.499249 4.2:+77436634 None:intergenic
ACGTAGTAGTCGCAAAAGAC+GGG 0.499578 4.2:-77436591 MS.gene48248:CDS
CCACAAGAAACCGTGTCAAA+TGG 0.501895 4.2:-77434988 MS.gene48248:CDS
GTAGTCGCAAAAGACGGGTC+CGG 0.506808 4.2:-77436586 MS.gene48248:CDS
GCCCTAGAATATTGCTTCCA+TGG 0.507314 4.2:+77435133 None:intergenic
AGCTTGATGGTTCTTTGCAC+CGG 0.510568 4.2:+77435486 None:intergenic
TCACCTGGCCTAACCCATGT+TGG 0.518597 4.2:+77436649 None:intergenic
AACGTAGTAGTCGCAAAAGA+CGG 0.519996 4.2:-77436592 MS.gene48248:CDS
AGTAGATGTAAATGGCACTT+TGG 0.524094 4.2:+77434877 None:intergenic
ACCGGTAGCAAAAGCGTTGG+AGG 0.524747 4.2:-77436406 MS.gene48248:CDS
AAATACAGACAAGTCTGATC+CGG 0.525381 4.2:+77435450 None:intergenic
AAAGCTGGATTCTATGATCT+TGG 0.525720 4.2:-77436784 MS.gene48248:CDS
ATGTTGGTTGGAGATGGTAT+TGG 0.525732 4.2:-77436442 MS.gene48248:CDS
TTCCCAACATGGGTTAGGCC+AGG 0.531406 4.2:-77436652 MS.gene48248:CDS
ACAATGTAACATTTATGGTA+CGG 0.531513 4.2:-77435362 MS.gene48248:CDS
ATGGGTTCCCAACATGGGTT+AGG 0.533950 4.2:-77436657 MS.gene48248:CDS
ACAAAGATGGGTTCCCAACA+TGG 0.535204 4.2:-77436663 MS.gene48248:CDS
AAGAACCTAGCTACAAAGAT+GGG 0.557927 4.2:-77436675 MS.gene48248:CDS
GTTTGATTCATCCATCTGGT+TGG 0.562831 4.2:-77435084 MS.gene48248:CDS
CTCAAGTTGATGCTCAAACA+TGG 0.563888 4.2:-77436840 MS.gene48248:CDS
ATTGTGTTGACTTTGTTTGG+AGG 0.571190 4.2:+77435277 None:intergenic
CTCCATTCTAACCAACCAGA+TGG 0.577867 4.2:+77435073 None:intergenic
AAGAAATACACACAAGGTGA+AGG 0.580485 4.2:+77437093 None:intergenic
ACATTCCGTTCTGCCACTGT+TGG 0.587276 4.2:-77436373 MS.gene48248:intron
GATAACCTTGCCATTTGACA+CGG 0.589011 4.2:+77434978 None:intergenic
ACCATGGAAGCAATATTCTA+GGG 0.592357 4.2:-77435134 MS.gene48248:CDS
ATTGGTAAAACTGTAATCAC+CGG 0.592601 4.2:-77436424 MS.gene48248:CDS
CTAATGAAAGAGTGTTTGCA+TGG 0.596121 4.2:+77436974 None:intergenic
AGACTTATCTTGGAAGACCA+TGG 0.599466 4.2:-77435150 MS.gene48248:CDS
ATCACCGGTAGCAAAAGCGT+TGG 0.601310 4.2:-77436409 MS.gene48248:CDS
TATGTTATACATGTGAAAGC+TGG 0.604818 4.2:-77436505 MS.gene48248:CDS
AGAAACCGTGTCAAATGGCA+AGG 0.607462 4.2:-77434983 MS.gene48248:CDS
TACCAAAGAATAACAAAGGT+AGG 0.608433 4.2:-77436528 MS.gene48248:CDS
GGTAGCAAAAGCGTTGGAGG+AGG 0.610712 4.2:-77436403 MS.gene48248:CDS
ATCACATTTAGGAACACTGC+CGG 0.612058 4.2:-77435505 MS.gene48248:CDS
GTAACATTGTTGGACATGAG+AGG 0.612493 4.2:+77436742 None:intergenic
CAAAGATGGGTTCCCAACAT+GGG 0.625227 4.2:-77436662 MS.gene48248:CDS
ACAGATCCTAACCAAAACAC+TGG 0.626471 4.2:-77435238 MS.gene48248:CDS
GCTATACCAAAGAATAACAA+AGG 0.633072 4.2:-77436532 MS.gene48248:CDS
TATGGAGAGTATATGAACAC+TGG 0.633586 4.2:-77435022 MS.gene48248:CDS
ACTTACCAACAGTGGCAGAA+CGG 0.640460 4.2:+77436368 None:intergenic
GTTCAAGAAAGAGCACTCAA+AGG 0.644742 4.2:-77436997 MS.gene48248:CDS
GTCAACACAATCACTGCACA+AGG 0.651414 4.2:-77435265 MS.gene48248:CDS
CGGTTTCAAATCCGAAGCAG+CGG 0.662915 4.2:+77435189 None:intergenic
TCTGGTTGGTTAGAATGGAG+TGG 0.670039 4.2:-77435070 MS.gene48248:CDS
CAGTAACTACTTACCAACAG+TGG 0.681222 4.2:+77436360 None:intergenic
AGTGGCAGAACGGAATGTTG+TGG 0.699012 4.2:+77436378 None:intergenic
TTGCTCAAGAAATACACACA+AGG 0.727071 4.2:+77437087 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTAACATTATTTTTGTTT+TGG + chr4.2:77435879-77435898 None:intergenic 10.0%
!! CAATTTATTTAAATTGTTGA+AGG - chr4.2:77436257-77436276 MS.gene48248:intron 15.0%
!!! CTTGCAATTTTTTTTTATAT+AGG + chr4.2:77436093-77436112 None:intergenic 15.0%
!! CTATTAATGTTAAAACTAAG+AGG + chr4.2:77436394-77436413 None:intergenic 20.0%
!! GCATTAAGTACTTTATATTA+TGG - chr4.2:77436963-77436982 MS.gene48248:CDS 20.0%
!! TACAAACAATGTAACATTTA+TGG - chr4.2:77436636-77436655 MS.gene48248:CDS 20.0%
!!! CTTTTATGTATTTATAGAAC+CGG - chr4.2:77436040-77436059 MS.gene48248:intron 20.0%
!!! TCTTGCAATTTTTTTGATAT+AGG + chr4.2:77436132-77436151 None:intergenic 20.0%
!!! TGAAATGTTGCTTATTATTA+AGG - chr4.2:77435707-77435726 MS.gene48248:intron 20.0%
!!! TTGCAAATATGTTACAATTT+TGG + chr4.2:77436701-77436720 None:intergenic 20.0%
!!! TTTGTTCCATTTTTTTAATG+CGG - chr4.2:77436201-77436220 MS.gene48248:intron 20.0%
!!! TTTTATAGATGTAGTTTTGA+AGG - chr4.2:77436573-77436592 MS.gene48248:CDS 20.0%
! AAAGGCAAAGAATATTATGT+TGG - chr4.2:77435545-77435564 MS.gene48248:intron 25.0%
! AATTCTGTTAAGACTTATCT+TGG - chr4.2:77436843-77436862 MS.gene48248:CDS 25.0%
! ACAATGTAACATTTATGGTA+CGG - chr4.2:77436641-77436660 MS.gene48248:CDS 25.0%
! CATTTCTATTCACAATTCTA+GGG - chr4.2:77436788-77436807 MS.gene48248:CDS 25.0%
! GTAAAACCGCATTAAAAAAA+TGG + chr4.2:77436210-77436229 None:intergenic 25.0%
! TAGCAATTTAGTAACATTGT+TGG + chr4.2:77435274-77435293 None:intergenic 25.0%
! TGATTTCTTCAAACTTTCAT+TGG - chr4.2:77434978-77434997 MS.gene48248:CDS 25.0%
!! GATAAGTCTTAACAGAATTT+TGG + chr4.2:77436842-77436861 None:intergenic 25.0%
!!! AACACTTTGTTTTAGTATCT+AGG + chr4.2:77435143-77435162 None:intergenic 25.0%
!!! ACACTTTGTTTTAGTATCTA+GGG + chr4.2:77435142-77435161 None:intergenic 25.0%
!!! CTGAATTTTTGGATTTAAGT+CGG - chr4.2:77436299-77436318 MS.gene48248:intron 25.0%
!!! TTTGTTTTATGAGTTTGTGT+TGG + chr4.2:77434954-77434973 None:intergenic 25.0%
!!! TTTTTTAATGCGGTTTTACT+AGG - chr4.2:77436211-77436230 MS.gene48248:intron 25.0%
AAATTGCAGAATTCCAAAAC+AGG + chr4.2:77436243-77436262 None:intergenic 30.0%
ACTGTATCAAATTTCATTGC+TGG - chr4.2:77437083-77437102 MS.gene48248:CDS 30.0%
ATTCTTTGGTATAGCATTCA+CGG + chr4.2:77435466-77435485 None:intergenic 30.0%
ATTGGTAAAACTGTAATCAC+CGG - chr4.2:77435579-77435598 MS.gene48248:intron 30.0%
CGACTTAAATCCAAAAATTC+AGG + chr4.2:77436301-77436320 None:intergenic 30.0%
GCAAAGAATATTATGTTGGT+TGG - chr4.2:77435549-77435568 MS.gene48248:intron 30.0%
GCATTTCTATTCACAATTCT+AGG - chr4.2:77436787-77436806 MS.gene48248:CDS 30.0%
GCTATACCAAAGAATAACAA+AGG - chr4.2:77435471-77435490 MS.gene48248:CDS 30.0%
TAAATTGCTAAGCAACACTT+TGG - chr4.2:77435284-77435303 MS.gene48248:CDS 30.0%
TACCAAAGAATAACAAAGGT+AGG - chr4.2:77435475-77435494 MS.gene48248:CDS 30.0%
TATGTTATACATGTGAAAGC+TGG - chr4.2:77435498-77435517 MS.gene48248:CDS 30.0%
! AATATTATGTTGGTTGGAGA+TGG - chr4.2:77435555-77435574 MS.gene48248:intron 30.0%
! CAATGAACAAGTTGAGATAA+AGG - chr4.2:77435527-77435546 MS.gene48248:CDS 30.0%
! TAAAATCCTGTGATTTTGCA+TGG - chr4.2:77436168-77436187 MS.gene48248:intron 30.0%
!! TACCTACCTTTGTTATTCTT+TGG + chr4.2:77435480-77435499 None:intergenic 30.0%
AAAGCTGGATTCTATGATCT+TGG - chr4.2:77435219-77435238 MS.gene48248:CDS 35.0%
AAATACAGACAAGTCTGATC+CGG + chr4.2:77436556-77436575 None:intergenic 35.0%
AAGAAATACACACAAGGTGA+AGG + chr4.2:77434913-77434932 None:intergenic 35.0%
AAGAACCTAGCTACAAAGAT+GGG - chr4.2:77435328-77435347 MS.gene48248:CDS 35.0%
ACCATGGAAGCAATATTCTA+GGG - chr4.2:77436869-77436888 MS.gene48248:CDS 35.0%
AGTAGATGTAAATGGCACTT+TGG + chr4.2:77437129-77437148 None:intergenic 35.0%
ATTTCATTGCTGGAAATGCT+TGG - chr4.2:77437093-77437112 MS.gene48248:CDS 35.0%
CATGCAAACACTCTTTCATT+AGG - chr4.2:77435030-77435049 MS.gene48248:CDS 35.0%
GATAGTTTGATTCATCCATC+TGG - chr4.2:77436915-77436934 MS.gene48248:CDS 35.0%
GTATTTATAGAACCGGATCA+CGG - chr4.2:77436047-77436066 MS.gene48248:intron 35.0%
TAAAAGACCAAGTTCTGTCT+AGG + chr4.2:77436026-77436045 None:intergenic 35.0%
TAAACAACCTAGACAGAACT+TGG - chr4.2:77436016-77436035 MS.gene48248:intron 35.0%
TATTTATAGAACCGGATCAC+GGG - chr4.2:77436048-77436067 MS.gene48248:intron 35.0%
TGAAATCCATGCAAAATCAC+AGG + chr4.2:77436177-77436196 None:intergenic 35.0%
TGGCTCAAGATATCACATTT+AGG - chr4.2:77436487-77436506 MS.gene48248:CDS 35.0%
TTCACGTGAGTTACTACATT+TGG + chr4.2:77435058-77435077 None:intergenic 35.0%
TTGCTCAAGAAATACACACA+AGG + chr4.2:77434919-77434938 None:intergenic 35.0%
TTTATATAGGTCAATCGACC+CGG + chr4.2:77436080-77436099 None:intergenic 35.0%
! ATGAGTTTGTGTTGGTAAGT+AGG + chr4.2:77434946-77434965 None:intergenic 35.0%
! CAAAATCGAGATTTAGCTTC+AGG - chr4.2:77435734-77435753 MS.gene48248:intron 35.0%
! CTGAAGCTAAATCTCGATTT+TGG + chr4.2:77435736-77435755 None:intergenic 35.0%
! GAATAGAAATGCCAGTGTTT+TGG + chr4.2:77436779-77436798 None:intergenic 35.0%
! GGTACGGTTGATTTCATATT+TGG - chr4.2:77436657-77436676 MS.gene48248:CDS 35.0%
! GTCGCAAAATCCTGAATTTT+TGG - chr4.2:77436288-77436307 MS.gene48248:intron 35.0%
! GTCTTAACAGAATTTTGGAC+CGG + chr4.2:77436837-77436856 None:intergenic 35.0%
! TATGGAGAGTATATGAACAC+TGG - chr4.2:77436981-77437000 MS.gene48248:CDS 35.0%
! TGAGTTTGTGTTGGTAAGTA+GGG + chr4.2:77434945-77434964 None:intergenic 35.0%
! TGTTGTTGGAGATGGATTTA+TGG - chr4.2:77436467-77436486 MS.gene48248:CDS 35.0%
!! ATTGTGTTGACTTTGTTTGG+AGG + chr4.2:77436729-77436748 None:intergenic 35.0%
!! CTAATGAAAGAGTGTTTGCA+TGG + chr4.2:77435032-77435051 None:intergenic 35.0%
!! GTGATTGTGTTGACTTTGTT+TGG + chr4.2:77436732-77436751 None:intergenic 35.0%
!! TTGTGTTGACTTTGTTTGGA+GGG + chr4.2:77436728-77436747 None:intergenic 35.0%
AACGTAGTAGTCGCAAAAGA+CGG - chr4.2:77435411-77435430 MS.gene48248:CDS 40.0%
AAGGTGAAGGATTAGGTGTT+TGG + chr4.2:77434900-77434919 None:intergenic 40.0%
AATCTTGAGACATGCAAAGC+TGG - chr4.2:77435204-77435223 MS.gene48248:CDS 40.0%
ACAGATCCTAACCAAAACAC+TGG - chr4.2:77436765-77436784 MS.gene48248:CDS 40.0%
ACTAACAGTTGTGTACTTCC+CGG + chr4.2:77435439-77435458 None:intergenic 40.0%
ACTCACGTGAAAAATCAGCT+TGG - chr4.2:77435067-77435086 MS.gene48248:CDS 40.0%
AGACTTATCTTGGAAGACCA+TGG - chr4.2:77436853-77436872 MS.gene48248:CDS 40.0%
AGCTTTGCATGTCTCAAGAT+TGG + chr4.2:77435205-77435224 None:intergenic 40.0%
ATCACATTTAGGAACACTGC+CGG - chr4.2:77436498-77436517 MS.gene48248:CDS 40.0%
CAAGAACCTAGCTACAAAGA+TGG - chr4.2:77435327-77435346 MS.gene48248:CDS 40.0%
CAGTAACTACTTACCAACAG+TGG + chr4.2:77435646-77435665 None:intergenic 40.0%
CTCACGTGAAAAATCAGCTT+GGG - chr4.2:77435068-77435087 MS.gene48248:CDS 40.0%
GACCATGGAAGCAATATTCT+AGG - chr4.2:77436868-77436887 MS.gene48248:CDS 40.0%
GTAACATTGTTGGACATGAG+AGG + chr4.2:77435264-77435283 None:intergenic 40.0%
GTTTGATTCATCCATCTGGT+TGG - chr4.2:77436919-77436938 MS.gene48248:CDS 40.0%
TACACACAAGGTGAAGGATT+AGG + chr4.2:77434907-77434926 None:intergenic 40.0%
TGTAGTAGCTTTCTATCACC+TGG + chr4.2:77435372-77435391 None:intergenic 40.0%
! AGATTTAGCTTCAGGTCGAA+TGG - chr4.2:77435742-77435761 MS.gene48248:intron 40.0%
! ATCCATCTGGTTGGTTAGAA+TGG - chr4.2:77436928-77436947 MS.gene48248:CDS 40.0%
! ATGTTGGTTGGAGATGGTAT+TGG - chr4.2:77435561-77435580 MS.gene48248:intron 40.0%
! GAGTATATGAACACTGGTCT+TGG - chr4.2:77436987-77437006 MS.gene48248:CDS 40.0%
! GATAACCTTGCCATTTGACA+CGG + chr4.2:77437028-77437047 None:intergenic 40.0%
! GATTTAGCTTCAGGTCGAAT+GGG - chr4.2:77435743-77435762 MS.gene48248:intron 40.0%
! TACTAGGATCTTGCCTGTTT+TGG - chr4.2:77436227-77436246 MS.gene48248:intron 40.0%
! TCTTTTGCGACTACTACGTT+AGG + chr4.2:77435411-77435430 None:intergenic 40.0%
! TGTCTTTTTGCAGCTGTTGT+TGG - chr4.2:77436453-77436472 MS.gene48248:CDS 40.0%
!! CTCAAGTTGATGCTCAAACA+TGG - chr4.2:77435163-77435182 MS.gene48248:CDS 40.0%
!! GTTCAAGAAAGAGCACTCAA+AGG - chr4.2:77435006-77435025 MS.gene48248:CDS 40.0%
!!! CTAGGGTTTTGTTGAGCTTA+AGG + chr4.2:77435125-77435144 None:intergenic 40.0%
!!! GAAATGCCAGTGTTTTGGTT+AGG + chr4.2:77436774-77436793 None:intergenic 40.0%
!!! GGTTTTGTTGAGCTTAAGGA+TGG + chr4.2:77435121-77435140 None:intergenic 40.0%
AACGCAATGCAACAGCTTGA+TGG + chr4.2:77436533-77436552 None:intergenic 45.0%
ACGTAGTAGTCGCAAAAGAC+GGG - chr4.2:77435412-77435431 MS.gene48248:CDS 45.0%
ACTTACCAACAGTGGCAGAA+CGG + chr4.2:77435638-77435657 None:intergenic 45.0%
AGAAACCGTGTCAAATGGCA+AGG - chr4.2:77437020-77437039 MS.gene48248:CDS 45.0%
CCACAAGAAACCGTGTCAAA+TGG - chr4.2:77437015-77437034 MS.gene48248:CDS 45.0%
CCATTTGACACGGTTTCTTG+TGG + chr4.2:77437018-77437037 None:intergenic 45.0%
CTCCATTCTAACCAACCAGA+TGG + chr4.2:77436933-77436952 None:intergenic 45.0%
GCCCTAGAATATTGCTTCCA+TGG + chr4.2:77436873-77436892 None:intergenic 45.0%
GTAAATGGCACTTTGGTTGC+AGG + chr4.2:77437122-77437141 None:intergenic 45.0%
GTCAACACAATCACTGCACA+AGG - chr4.2:77436738-77436757 MS.gene48248:CDS 45.0%
TTTGCAGCTGTTGTTGGAGA+TGG - chr4.2:77436459-77436478 MS.gene48248:CDS 45.0%
! ACAAAGATGGGTTCCCAACA+TGG - chr4.2:77435340-77435359 MS.gene48248:CDS 45.0%
! AGCTTGATGGTTCTTTGCAC+CGG + chr4.2:77436520-77436539 None:intergenic 45.0%
! CAAAGATGGGTTCCCAACAT+GGG - chr4.2:77435341-77435360 MS.gene48248:CDS 45.0%
! TCTGGTTGGTTAGAATGGAG+TGG - chr4.2:77436933-77436952 MS.gene48248:CDS 45.0%
ACATTCCGTTCTGCCACTGT+TGG - chr4.2:77435630-77435649 MS.gene48248:intron 50.0%
ACCGGATCACGGGTATAATC+CGG - chr4.2:77436058-77436077 MS.gene48248:intron 50.0%
AGTGGCAGAACGGAATGTTG+TGG + chr4.2:77435628-77435647 None:intergenic 50.0%
ATGGGTTCCCAACATGGGTT+AGG - chr4.2:77435346-77435365 MS.gene48248:CDS 50.0%
CAAGCTGTTGCATTGCGTTC+CGG - chr4.2:77436534-77436553 MS.gene48248:CDS 50.0%
CGGTTTCAAATCCGAAGCAG+CGG + chr4.2:77436817-77436836 None:intergenic 50.0%
GGGAACCCATCTTTGTAGCT+AGG + chr4.2:77435336-77435355 None:intergenic 50.0%
! ATCACCGGTAGCAAAAGCGT+TGG - chr4.2:77435594-77435613 MS.gene48248:intron 50.0%
! CGCTGCTTCGGATTTGAAAC+CGG - chr4.2:77436815-77436834 MS.gene48248:CDS 50.0%
! TCCTCCAACGCTTTTGCTAC+CGG + chr4.2:77435601-77435620 None:intergenic 50.0%
!! TTCTAGGGTTACCGCTGCTT+CGG - chr4.2:77436803-77436822 MS.gene48248:CDS 50.0%
CACCTGGCCTAACCCATGTT+GGG + chr4.2:77435356-77435375 None:intergenic 55.0%
CCCGGATTATACCCGTGATC+CGG + chr4.2:77436062-77436081 None:intergenic 55.0%
CCGGATCACGGGTATAATCC+GGG - chr4.2:77436059-77436078 MS.gene48248:intron 55.0%
GTAGTCGCAAAAGACGGGTC+CGG - chr4.2:77435417-77435436 MS.gene48248:CDS 55.0%
TAGTCGCAAAAGACGGGTCC+GGG - chr4.2:77435418-77435437 MS.gene48248:CDS 55.0%
TCACCTGGCCTAACCCATGT+TGG + chr4.2:77435357-77435376 None:intergenic 55.0%
!! ACCGGTAGCAAAAGCGTTGG+AGG - chr4.2:77435597-77435616 MS.gene48248:intron 55.0%
!! GGTAGCAAAAGCGTTGGAGG+AGG - chr4.2:77435600-77435619 MS.gene48248:intron 55.0%
!! TTCCCAACATGGGTTAGGCC+AGG - chr4.2:77435351-77435370 MS.gene48248:CDS 55.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 77434871 77437154 77434871 ID=MS.gene48248
chr4.2 mRNA 77434871 77437154 77434871 ID=MS.gene48248.t1;Parent=MS.gene48248
chr4.2 exon 77436374 77437154 77436374 ID=MS.gene48248.t1.exon1;Parent=MS.gene48248.t1
chr4.2 CDS 77436374 77437154 77436374 ID=cds.MS.gene48248.t1;Parent=MS.gene48248.t1
chr4.2 exon 77434871 77435559 77434871 ID=MS.gene48248.t1.exon2;Parent=MS.gene48248.t1
chr4.2 CDS 77434871 77435559 77434871 ID=cds.MS.gene48248.t1;Parent=MS.gene48248.t1
Gene Sequence

>MS.gene48248

ATGAATGAAGTTAAACTTTGGTGTAACCAAACACCTAATCCTTCACCTTGTGTGTATTTCTTGAGCAATAACCCTACTTACCAACACAAACTCATAAAACAAAAAGTTGATTTCTTCAAACTTTCATTGGAACTTGTTCAAGAAAGAGCACTCAAAGGCCATGCAAACACTCTTTCATTAGGCTCCAAATGTAGTAACTCACGTGAAAAATCAGCTTGGGATGATTGTGTTGAGCTATATGAACAAACCATCCTTAAGCTCAACAAAACCCTAGATACTAAAACAAAGTGTTCTCAAGTTGATGCTCAAACATGGCTAAGCACTGCTCTCACCAATCTTGAGACATGCAAAGCTGGATTCTATGATCTTGGTGTTCAAGATTATATTCTTCCTCTCATGTCCAACAATGTTACTAAATTGCTAAGCAACACTTTGGCTCTTAACAAAGTTCAATATCAAGAACCTAGCTACAAAGATGGGTTCCCAACATGGGTTAGGCCAGGTGATAGAAAGCTACTACAAACTTCGTCTTCTCGACCTAACGTAGTAGTCGCAAAAGACGGGTCCGGGAAGTACACAACTGTTAGTGCAGCCGTGAATGCTATACCAAAGAATAACAAAGGTAGGTATGTTATACATGTGAAAGCTGGTGTCTACAATGAACAAGTTGAGATAAAGGCAAAGAATATTATGTTGGTTGGAGATGGTATTGGTAAAACTGTAATCACCGGTAGCAAAAGCGTTGGAGGAGGAACCACAACATTCCGTTCTGCCACTGTTGGTAAGTAGTTACTGCTAAAAAAAATTATTTATTGATACAAGTTTGAGATACAATATGAAATGTTGCTTATTATTAAGGTTGCCAAAATCGAGATTTAGCTTCAGGTCGAATGGGACTAGCAAAATCATAAAATTGCAATCAAAATCGAAAGATTTTACTCAACTACTTTTGTATAATCGATATATAGCAAAATCGAAAATCGTAATCAAAATTGATAGATTTTACCAAAACAAAAATAATGTTAAATATATGCTATGAATTTTCTAGAGTCATAAATGACTCAAAGTTTAAAGTCTACAAAATACTTATACATAAATGACTCGAAACTTAGATGTCAAATATTCTTTAGTAGTCATAATAATACTAAACAACCTAGACAGAACTTGGTCTTTTATGTATTTATAGAACCGGATCACGGGTATAATCCGGGTCGATTGACCTATATAAAAAAAAATTGCAAGAATCATTCAATATTGACCTATATCAAAAAAATTGCAAGAATCATTCAAAATCTTGTAAAATCCTGTGATTTTGCATGGATTTCATGATTTTGTTCCATTTTTTTAATGCGGTTTTACTAGGATCTTGCCTGTTTTGGAATTCTGCAATTTATTTAAATTGTTGAAGGTGAATAAAGTCGCAAAATCCTGAATTTTTGGATTTAAGTCGGAATTTGACAACAATGCTTATTATGTCTTTAATTGTTATATATGTGTTTGTATCTAGATTAAAACATTCTCCTCTTAGTTTTAACATTAATAGAATACACTCAATGACTAGAAATCTAACGAATATATATTATGTCTTTTTGCAGCTGTTGTTGGAGATGGATTTATGGCTCAAGATATCACATTTAGGAACACTGCCGGTGCAAAGAACCATCAAGCTGTTGCATTGCGTTCCGGATCAGACTTGTCTGTATTTTATAGATGTAGTTTTGAAGGTTTTCAAGACACATTATATGTGCATTCAGATAGACAATTCTACAAACAATGTAACATTTATGGTACGGTTGATTTCATATTTGGTAATGCTGCTGCAGTGTTCCAAAATTGTAACATATTTGCAAGAAACCCTCCAAACAAAGTCAACACAATCACTGCACAAGGTAGAACAGATCCTAACCAAAACACTGGCATTTCTATTCACAATTCTAGGGTTACCGCTGCTTCGGATTTGAAACCGGTCCAAAATTCTGTTAAGACTTATCTTGGAAGACCATGGAAGCAATATTCTAGGGCAGTTTTTATGAAGACTTCTCTTGATAGTTTGATTCATCCATCTGGTTGGTTAGAATGGAGTGGTAATTTTGCATTAAGTACTTTATATTATGGAGAGTATATGAACACTGGTCTTGGTTCTTCCACAAGAAACCGTGTCAAATGGCAAGGTTATCATGTGATAACAAGTGCTTCTGAAGCATCAAAGTTCACTGTATCAAATTTCATTGCTGGAAATGCTTGGTTACCTGCAACCAAAGTGCCATTTACATCTACTCTTTAA
Protein sequence

>MS.gene48248.t1

MNEVKLWCNQTPNPSPCVYFLSNNPTYQHKLIKQKVDFFKLSLELVQERALKGHANTLSLGSKCSNSREKSAWDDCVELYEQTILKLNKTLDTKTKCSQVDAQTWLSTALTNLETCKAGFYDLGVQDYILPLMSNNVTKLLSNTLALNKVQYQEPSYKDGFPTWVRPGDRKLLQTSSSRPNVVVAKDGSGKYTTVSAAVNAIPKNNKGRYVIHVKAGVYNEQVEIKAKNIMLVGDGIGKTVITGSKSVGGGTTTFRSATVAVVGDGFMAQDITFRNTAGAKNHQAVALRSGSDLSVFYRCSFEGFQDTLYVHSDRQFYKQCNIYGTVDFIFGNAAAVFQNCNIFARNPPNKVNTITAQGRTDPNQNTGISIHNSRVTAASDLKPVQNSVKTYLGRPWKQYSRAVFMKTSLDSLIHPSGWLEWSGNFALSTLYYGEYMNTGLGSSTRNRVKWQGYHVITSASEASKFTVSNFIAGNAWLPATKVPFTSTL