AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene006179

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene006179.t1 MTR_1g099000 98.051 1180 18 2 77 1253 163 1340 0.0 1930
MS.gene006179.t1 MTR_1g098970 88.906 640 71 0 614 1253 187 826 0.0 1192
MS.gene006179.t1 MTR_4g006320 64.720 411 106 5 609 1018 24 396 1.05e-170 511
MS.gene006179.t1 MTR_4g005290 60.000 465 102 9 625 1083 2 388 7.63e-168 504
MS.gene006179.t1 MTR_7g102950 58.580 338 135 2 651 987 25 358 7.06e-124 388
MS.gene006179.t1 MTR_7g102950 59.596 297 115 2 651 946 25 317 4.50e-108 344
MS.gene006179.t1 MTR_7g101830 49.697 330 155 3 658 985 51 371 3.45e-94 308
MS.gene006179.t1 MTR_4g011840 64.981 257 70 6 975 1224 216 459 3.53e-90 299
MS.gene006179.t1 MTR_4g011840 53.304 227 72 5 662 885 13 208 1.08e-67 236
MS.gene006179.t1 MTR_7g100900 62.241 241 70 3 995 1218 213 449 9.35e-85 284
MS.gene006179.t1 MTR_7g100900 49.029 206 66 7 655 853 8 181 5.47e-47 176
MS.gene006179.t1 MTR_2g064840 27.000 500 253 17 662 1122 495 921 6.66e-27 119
MS.gene006179.t1 MTR_5g032140 25.893 560 311 20 662 1193 187 670 1.35e-20 98.6
MS.gene006179.t1 MTR_5g032140 25.893 560 311 20 662 1193 200 683 1.95e-20 98.2
MS.gene006179.t1 MTR_4g076265 80.000 35 7 0 893 927 36 70 2.97e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene006179.t1 AT1G76810 62.321 1327 393 29 1 1253 1 1294 0.0 1209
MS.gene006179.t1 AT1G76720 60.559 1288 372 36 1 1231 11 1219 0.0 1133
MS.gene006179.t1 AT1G76720 59.969 1279 371 33 1 1231 1 1186 0.0 1129
MS.gene006179.t1 AT1G21160 58.880 1036 353 20 254 1253 94 1092 0.0 1021
MS.gene006179.t1 AT2G27700 70.722 485 130 5 622 1105 5 478 0.0 687
MS.gene006179.t1 AT2G27700 70.576 486 130 6 622 1105 5 479 0.0 683
MS.gene006179.t1 AT1G17220 26.819 481 249 17 662 1110 500 909 1.79e-26 118
MS.gene006179.t1 AT4G11160 38.346 133 60 2 662 790 218 332 3.96e-21 99.8
MS.gene006179.t1 AT4G11160 23.446 563 323 16 662 1191 216 703 1.04e-19 95.9
MS.gene006179.t1 AT4G11160 23.446 563 323 16 662 1191 218 705 2.03e-19 95.1

Find 316 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATCTATTTGATCAATTTA+AGG 0.120606 1.4:+76975219 MS.gene006179:CDS
AATTCAAGCACATACCTTAA+TGG 0.180909 1.4:-76975911 None:intergenic
TCGCATAATCAACCGGTTTA+TGG 0.181960 1.4:-76975870 None:intergenic
TTGCAGGTTGACAGGCTTTA+TGG 0.183037 1.4:+76972905 MS.gene006179:intron
CCTTTCTTTGTCTGATAAAT+AGG 0.186529 1.4:-76971248 None:intergenic
TCTATGTGATATTGCAATTT+TGG 0.214686 1.4:+76972708 MS.gene006179:CDS
GCTTCTCGGTCATGGTCTTT+TGG 0.220651 1.4:-76973915 None:intergenic
TGGCTCATTGGAAGCATTAT+TGG 0.222532 1.4:+76974988 MS.gene006179:CDS
CAAGAAGGATCCGATTGTTT+TGG 0.225158 1.4:+76975339 MS.gene006179:CDS
TTCTTGTTGAAGACACAATT+TGG 0.236922 1.4:-76975322 None:intergenic
CACTTTCTTGTCAGCCGCTT+TGG 0.268956 1.4:-76970898 None:intergenic
GGTTCTGCCCCTGGTGCTTC+AGG 0.278743 1.4:+76970699 MS.gene006179:CDS
TTCTCGTCGTCGCGGATTGC+TGG 0.281368 1.4:-76969487 None:intergenic
AGAAAGTGCCAAAGCATGTT+AGG 0.301941 1.4:+76970913 MS.gene006179:CDS
CCCTTTCTTCGAACCCTTTG+AGG 0.302276 1.4:-76970106 None:intergenic
AAGGCAGCGGCAGCAGCAGC+TGG 0.303633 1.4:+76970804 MS.gene006179:CDS
CAATAGATCTCCGTGAAATA+TGG 0.308897 1.4:-76976328 None:intergenic
TGATTTGGAATATATTAAAA+AGG 0.312978 1.4:+76974886 MS.gene006179:CDS
ATTCATTGTTGCATTGAATA+AGG 0.320644 1.4:+76972804 MS.gene006179:CDS
AACTTGAGGTCTCGGGGTTC+AGG 0.322803 1.4:+76972685 MS.gene006179:CDS
AGGGCAGAAAGTAGCCATTA+AGG 0.323078 1.4:+76975897 MS.gene006179:CDS
GTGAGTGATGAAATCGAGTT+TGG 0.323250 1.4:+76970429 MS.gene006179:CDS
TTTACGGCTGCAGCTGGTTT+TGG 0.326903 1.4:+76969985 MS.gene006179:CDS
TCTTGGGAAGGGATACAAAT+TGG 0.327465 1.4:-76975808 None:intergenic
GGCTTACATGGACAACATTA+AGG 0.327960 1.4:+76975240 MS.gene006179:CDS
TCCCAAGAGTTCATTGATAT+TGG 0.331197 1.4:+76975823 MS.gene006179:CDS
TGCATCAGCTTTCAGTTCCT+TGG 0.331642 1.4:-76972605 None:intergenic
GCAGCAGGTTGTGCTGTAGC+AGG 0.333529 1.4:-76970630 None:intergenic
TAGGGATCTTGCAGAAGAAT+TGG 0.335361 1.4:+76975165 MS.gene006179:CDS
TCTTCTACAGCTTCAATTAC+CGG 0.335849 1.4:-76970834 None:intergenic
TCTGCAAGATCCCTAGCTTC+AGG 0.339277 1.4:-76975157 None:intergenic
TGCATCTCCCTAACATGCTT+TGG 0.339681 1.4:-76970921 None:intergenic
CTAGATTGTCACTCAGTTCA+AGG 0.343186 1.4:+76973106 MS.gene006179:intron
TCAGCTGCAGGCTTCGTAAC+AGG 0.343911 1.4:-76972319 None:intergenic
TTCCCTTCACTCGGCTTAGA+AGG 0.346826 1.4:-76972421 None:intergenic
GGCATCTACCCTTGGCTCAT+TGG 0.352679 1.4:+76974976 MS.gene006179:CDS
GGGGATCAAATAGTTGTATC+TGG 0.361083 1.4:+76974138 MS.gene006179:CDS
TTCATTGAGTAAAGCTATTC+CGG 0.362489 1.4:+76970275 MS.gene006179:CDS
CCTTTCTTCGAACCCTTTGA+GGG 0.364102 1.4:-76970105 None:intergenic
TGACCCATGATGCAGCAAAT+TGG 0.364112 1.4:-76972454 None:intergenic
ATCACATCCTTCTTGTGTAC+AGG 0.364120 1.4:-76975064 None:intergenic
TTAACACGAAGTTCCTTCAT+TGG 0.364194 1.4:-76974284 None:intergenic
GGGCTTGAACATGCTATTGC+TGG 0.370042 1.4:+76974833 MS.gene006179:CDS
CGGTTTATGGTTATTCTCAA+TGG 0.370182 1.4:-76975857 None:intergenic
GAAAGAAGAAGCCCGGCGTT+TGG 0.370964 1.4:+76971145 MS.gene006179:CDS
ATATTCTCAAAACTAATTAT+CGG 0.374973 1.4:+76976351 MS.gene006179:CDS
TTCGCTGTATGTAAGCTTCT+CGG 0.376770 1.4:-76973929 None:intergenic
ATACCTTTAAAATGCCTTCA+AGG 0.381890 1.4:-76975372 None:intergenic
AGTTACCTTATTGCACTTGT+AGG 0.383336 1.4:-76973194 None:intergenic
CACTGGCAAAACCAAGCTTC+TGG 0.384093 1.4:+76972483 MS.gene006179:CDS
CAACTTCGTTTGCAGATTGT+TGG 0.386207 1.4:+76976239 MS.gene006179:intron
TGGCTACCAGTGTACCGTTT+TGG 0.388026 1.4:+76974047 MS.gene006179:intron
ACGAGAGTATGCTACTATAT+TGG 0.389206 1.4:+76975114 MS.gene006179:CDS
ATGATGTCAATCTGAATGAT+AGG 0.389984 1.4:+76971483 MS.gene006179:CDS
CAGGAAGGTAAATTGTTAAC+TGG 0.390014 1.4:+76971116 MS.gene006179:CDS
GACCAATATCAATGAACTCT+TGG 0.397471 1.4:-76975825 None:intergenic
GCTCGAATTGTGGTAACAAT+TGG 0.397760 1.4:-76974245 None:intergenic
GGTTTCTCTTCCACCGCAAC+CGG 0.398483 1.4:-76969613 None:intergenic
CCACCGCCTTGTTGCGGCGG+AGG 0.398804 1.4:-76969511 None:intergenic
CTAACAGGAATATTCACTTC+TGG 0.399897 1.4:-76975025 None:intergenic
GTCGCCAATTTGCTGCATCA+TGG 0.404818 1.4:+76972450 MS.gene006179:CDS
ACCTTTCTTCGAACCCTTCG+AGG 0.405098 1.4:-76969944 None:intergenic
CCTATGTTTATAGCACTAAC+AGG 0.407601 1.4:-76975040 None:intergenic
CTGCAAGATCCCTAGCTTCA+GGG 0.408159 1.4:-76975156 None:intergenic
ACTAATAGTAATAACATATC+CGG 0.410722 1.4:-76973883 None:intergenic
TTCTTACCCGAGAAAGTGAT+TGG 0.411659 1.4:-76970216 None:intergenic
TCTTCAGTTTCTTCAGCTGC+AGG 0.413951 1.4:-76972331 None:intergenic
TTATTGAATGACTCGTGTCC+TGG 0.414476 1.4:-76972664 None:intergenic
GAAGAACAGCAGAAAATGTT+CGG 0.414887 1.4:+76976272 MS.gene006179:CDS
TCGAAGAAAGGTGGTGGTGG+TGG 0.415570 1.4:+76969955 MS.gene006179:CDS
CCTATTTATCAGACAAAGAA+AGG 0.419360 1.4:+76971248 MS.gene006179:CDS
GTTCAGCCGGTTCCTGTAGT+AGG 0.420123 1.4:+76970678 MS.gene006179:CDS
TGGTGGTGGAAGTGTGTTTA+CGG 0.422401 1.4:+76969969 MS.gene006179:CDS
ATATATTCCAAATCATCATC+AGG 0.422912 1.4:-76974878 None:intergenic
GGTAAAGCCTGATGATGATT+TGG 0.424032 1.4:+76974871 MS.gene006179:CDS
TTGAGTGACTCTATAGTTTG+TGG 0.428244 1.4:-76972757 None:intergenic
TGATAATGGTGAGGAGAAAT+CGG 0.429154 1.4:+76970044 MS.gene006179:CDS
CCTTTCTTCGCATAATCAAC+CGG 0.430053 1.4:-76975877 None:intergenic
CATTCAATAACTTGAGGTCT+CGG 0.430364 1.4:+76972677 MS.gene006179:CDS
CTCGATTTCATCACTCACTT+TGG 0.433153 1.4:-76970424 None:intergenic
CAGCAGGTTGTGCTGTAGCA+GGG 0.434057 1.4:-76970629 None:intergenic
TTGTGCCTACAAGTGCAATA+AGG 0.435172 1.4:+76973189 MS.gene006179:CDS
TCCTCATTGCCTCCAAACGC+CGG 0.435876 1.4:-76971157 None:intergenic
AGCAATGACACAGCAGTCTA+AGG 0.435929 1.4:+76972961 MS.gene006179:CDS
ATGATGATGTTGAGGATGAA+TGG 0.437230 1.4:+76971444 MS.gene006179:CDS
ACTACTTCTTCAACAACTTC+AGG 0.437617 1.4:-76971413 None:intergenic
AAGCTTCTGGATTGCATTCG+AGG 0.438347 1.4:+76972496 MS.gene006179:CDS
CAGCTTTGATTTCTTTGTGA+TGG 0.440327 1.4:-76974667 None:intergenic
TATTCTCAAAACTAATTATC+GGG 0.440804 1.4:+76976352 MS.gene006179:CDS
TGGTGAGGGCGTTTGTGTCC+AGG 0.441481 1.4:+76974955 MS.gene006179:CDS
CCCTGGTGCTTCAGGAGAAA+AGG 0.442140 1.4:+76970707 MS.gene006179:CDS
ACTCTTCCTGGCGCGGACAC+TGG 0.442324 1.4:+76971209 MS.gene006179:CDS
AATGAAGGAACTTCGTGTTA+AGG 0.444264 1.4:+76974286 MS.gene006179:CDS
ACAACGAATCGAAATCATAA+TGG 0.444429 1.4:+76971275 MS.gene006179:CDS
TTTATCCTCAACCACAACTT+TGG 0.444603 1.4:-76972365 None:intergenic
TGCTGAGGAGGAGCCGCAGC+AGG 0.448228 1.4:-76970645 None:intergenic
GTTAATGGTGTTCTTCATGA+AGG 0.449872 1.4:+76974117 MS.gene006179:CDS
ATTCAATAACTTGAGGTCTC+GGG 0.449916 1.4:+76972678 MS.gene006179:CDS
TGTGTCATTGCTTTACGAAT+TGG 0.449988 1.4:-76972950 None:intergenic
AGGAAGAGGAAGAGAAGCAA+AGG 0.451717 1.4:+76970988 MS.gene006179:CDS
AGATTCAGAGGAACCTGAAA+AGG 0.452639 1.4:+76971355 MS.gene006179:CDS
GGTGTCAGAGGATGCGGCTC+CGG 0.452789 1.4:+76969594 MS.gene006179:CDS
GATGCAACACTGAAAGTTCC+CGG 0.455894 1.4:+76972622 MS.gene006179:CDS
TGCTGCGGCTCCTCCTCAGC+AGG 0.455982 1.4:+76970647 MS.gene006179:CDS
CTTTCACGTATGTTCTCAGC+AGG 0.456275 1.4:-76972580 None:intergenic
AGAGGATGCGGCTCCGGTTG+CGG 0.458787 1.4:+76969600 MS.gene006179:CDS
TCGCAACATTGCAGGTTGAC+AGG 0.458948 1.4:+76972897 MS.gene006179:intron
TGATGAACCAATCACTTTCT+CGG 0.459759 1.4:+76970209 MS.gene006179:CDS
GACATAGGATGATCTGACTA+TGG 0.460108 1.4:+76977028 MS.gene006179:intron
CAAAGAAATCAAAGCTGCTA+TGG 0.462455 1.4:+76974673 MS.gene006179:CDS
TTGGAAGTCAAGGTTATTGA+AGG 0.462841 1.4:+76974066 MS.gene006179:CDS
TGATCAATTTAAGGCTTACA+TGG 0.463950 1.4:+76975228 MS.gene006179:CDS
TTGCTTGGGGATGAGGAAGA+TGG 0.465246 1.4:+76970009 MS.gene006179:CDS
AACTTGTAAGCCATATTTCA+CGG 0.465418 1.4:+76976318 MS.gene006179:CDS
TTGGGAGTTGATATCCTTGA+AGG 0.466103 1.4:+76975358 MS.gene006179:CDS
CCTCAAAGGGTTCGAAGAAA+GGG 0.467473 1.4:+76970106 MS.gene006179:CDS
CCCTCAAAGGGTTCGAAGAA+AGG 0.467654 1.4:+76970105 MS.gene006179:CDS
GATAGAGGAACTTGAGAGAC+AGG 0.468572 1.4:+76971034 MS.gene006179:CDS
AAGAACAGCAGAAAATGTTC+GGG 0.470152 1.4:+76976273 MS.gene006179:CDS
AGAAACTGAAGATAGAAAAC+AGG 0.470475 1.4:+76972342 MS.gene006179:CDS
CGGTCTTGAGCAGGATTGAC+AGG 0.472577 1.4:+76974930 MS.gene006179:CDS
GATGAACCAATCACTTTCTC+GGG 0.476483 1.4:+76970210 MS.gene006179:CDS
GGTCCACCAGTGTCCGCGCC+AGG 0.479029 1.4:-76971215 None:intergenic
AATGTTCAAGAAGGTGAGGC+TGG 0.479918 1.4:+76972523 MS.gene006179:CDS
TATTCATCGTCATCGATAAC+CGG 0.480313 1.4:-76969553 None:intergenic
ACCAATATCAATGAACTCTT+GGG 0.480786 1.4:-76975824 None:intergenic
TGTGTCCAGGCATCTACCCT+TGG 0.481656 1.4:+76974968 MS.gene006179:CDS
GGTGATAATGATAATGATAA+TGG 0.482327 1.4:+76970030 MS.gene006179:CDS
ACTGAAAGTTCCCGGTCTAC+TGG 0.483185 1.4:+76972630 MS.gene006179:CDS
CCTCATTGCCTCCAAACGCC+GGG 0.486379 1.4:-76971156 None:intergenic
AGGGATCTTGCAGAAGAATT+GGG 0.486944 1.4:+76975166 MS.gene006179:CDS
TCGCCAATTTGCTGCATCAT+GGG 0.487968 1.4:+76972451 MS.gene006179:CDS
GATAAGCTTCTCGCAGAGCT+TGG 0.489009 1.4:+76970600 MS.gene006179:CDS
AGCCTCACCTTCTTGAACAT+TGG 0.489331 1.4:-76972521 None:intergenic
TGAGAATGATGATGGAGAAG+AGG 0.490930 1.4:+76970155 MS.gene006179:CDS
TGATGATGTTGAGGATGAAT+GGG 0.491154 1.4:+76971445 MS.gene006179:CDS
AGAGGAGCGACGAAGGATAG+AGG 0.492105 1.4:+76971019 MS.gene006179:CDS
TCAAAGTCACCCCTGAAGCT+AGG 0.492751 1.4:+76975146 MS.gene006179:CDS
CCGGTTGATTATGCGAAGAA+AGG 0.495046 1.4:+76975877 MS.gene006179:CDS
TAGGGAGATGCAAGAACTAC+TGG 0.496180 1.4:+76970932 MS.gene006179:CDS
AGAGGAGAGTAAGAATGAAA+AGG 0.496191 1.4:+76970173 MS.gene006179:CDS
AAAGAAAGAATCTGCGGATG+AGG 0.496199 1.4:+76975270 MS.gene006179:CDS
AATAACCTTGACTTCCAAAA+CGG 0.496574 1.4:-76974061 None:intergenic
TCCTCGAAGGGTTCGAAGAA+AGG 0.497317 1.4:+76969943 MS.gene006179:CDS
CATTGAGAATAACCATAAAC+CGG 0.497395 1.4:+76975858 MS.gene006179:CDS
GTATGTAAGCTTCTCGGTCA+TGG 0.499658 1.4:-76973923 None:intergenic
CCTGTAGTAGGTTCTGCCCC+TGG 0.500848 1.4:+76970690 MS.gene006179:CDS
ATTTAATATTTCAGTGGTGA+AGG 0.501321 1.4:+76973856 MS.gene006179:intron
TTCAGAATGAGTTCAATATG+AGG 0.501847 1.4:+76972987 MS.gene006179:CDS
GTCATCAAAGGGTTCGAAGA+AGG 0.501993 1.4:+76970245 MS.gene006179:CDS
AAAAGAATAAGAAGAAGAGT+GGG 0.502262 1.4:+76970550 MS.gene006179:CDS
TATTGAATGACTCGTGTCCT+GGG 0.502284 1.4:-76972663 None:intergenic
AATAGTTGTATCTGGAATGC+AGG 0.504285 1.4:+76974146 MS.gene006179:CDS
CGGTTGATTATGCGAAGAAA+GGG 0.505603 1.4:+76975878 MS.gene006179:CDS
AGGCAGATTCTCAATAGCAC+AGG 0.506514 1.4:+76971179 MS.gene006179:CDS
CGAAGTTCCTTCATTGGATG+AGG 0.509629 1.4:-76974278 None:intergenic
CCTCCGCCGCAACAAGGCGG+TGG 0.509665 1.4:+76969511 MS.gene006179:CDS
AGAGGCTAAACGTAGAAAGA+AGG 0.510786 1.4:+76971061 MS.gene006179:CDS
GACCGAAGGTTCCCTTCACT+CGG 0.511610 1.4:-76972430 None:intergenic
ATGAGCCAAGGGTAGATGCC+TGG 0.511848 1.4:-76974973 None:intergenic
GGTTGAAGAAGTGGAGATGG+AGG 0.513489 1.4:+76971376 MS.gene006179:CDS
ACGTGGAGTCGGTCTTGAGC+AGG 0.513755 1.4:+76974921 MS.gene006179:CDS
ATATCAACTCCCAAAACAAT+CGG 0.514889 1.4:-76975349 None:intergenic
AGCCGAGTGAAGGGAACCTT+CGG 0.515404 1.4:+76972428 MS.gene006179:CDS
GCAGAACCTACTACAGGAAC+CGG 0.517619 1.4:-76970684 None:intergenic
AAAGGTTGAAGAAGTGGAGA+TGG 0.518426 1.4:+76971373 MS.gene006179:CDS
GGTTCGAAGAAAGGTGGTGG+TGG 0.518634 1.4:+76969952 MS.gene006179:CDS
CTTCCTGGCGCGGACACTGG+TGG 0.519626 1.4:+76971212 MS.gene006179:CDS
TGCTGGAGCTAGTTTATATG+TGG 0.519781 1.4:+76974850 MS.gene006179:CDS
GGAGGAGGTGTCAGAGGATG+CGG 0.521052 1.4:+76969588 MS.gene006179:CDS
GTCACTCAGTTCAAGGAACA+AGG 0.521657 1.4:+76973113 MS.gene006179:CDS
CCTGTTAGTGCTATAAACAT+AGG 0.522577 1.4:+76975040 MS.gene006179:CDS
ATTGACACCTCATCCAATGA+AGG 0.523422 1.4:+76974271 MS.gene006179:CDS
AGCAGCAGCTGGAAGTGCAC+CGG 0.523466 1.4:+76970815 MS.gene006179:CDS
GGGAAGAAGAAGCCCTCAAA+GGG 0.524012 1.4:+76970093 MS.gene006179:CDS
ATGTTCAAGAAGGTGAGGCT+GGG 0.524700 1.4:+76972524 MS.gene006179:CDS
TGGGAGGACTAAAGAAGAGG+AGG 0.525672 1.4:+76970569 MS.gene006179:CDS
TACATACAGCGAAGAAGTGC+AGG 0.526176 1.4:+76973939 MS.gene006179:CDS
AGAATAAGAAGAAGAGTGGG+AGG 0.527306 1.4:+76970553 MS.gene006179:CDS
AGTGTGTTTACGGCTGCAGC+TGG 0.528190 1.4:+76969979 MS.gene006179:CDS
CAAAGTCACCCCTGAAGCTA+GGG 0.528771 1.4:+76975147 MS.gene006179:CDS
AGGTTGACAGGCTTTATGGC+TGG 0.530442 1.4:+76972909 MS.gene006179:intron
TCGAATGCAATCCAGAAGCT+TGG 0.530972 1.4:-76972494 None:intergenic
TTTCCACCGCCTTGTTGCGG+CGG 0.531546 1.4:-76969514 None:intergenic
GAAAGTGCCAAAGCATGTTA+GGG 0.533187 1.4:+76970914 MS.gene006179:CDS
TTAATGGTGTTCTTCATGAA+GGG 0.534561 1.4:+76974118 MS.gene006179:CDS
GACTATGGAGGAATGGAAGC+TGG 0.535656 1.4:+76977043 MS.gene006179:CDS
ACCTGAAAAGGTTGAAGAAG+TGG 0.535666 1.4:+76971367 MS.gene006179:CDS
GTCAAGGTTATTGAAGGCCA+TGG 0.537843 1.4:+76974072 MS.gene006179:CDS
TCACATCCTTCTTGTGTACA+GGG 0.538962 1.4:-76975063 None:intergenic
GTACGTTGCACCAATCTGTT+GGG 0.541158 1.4:-76972554 None:intergenic
AAAGAAATCAAAGCTGCTAT+GGG 0.542406 1.4:+76974674 MS.gene006179:CDS
GAAGCAAAGGAAAGAAGAAG+AGG 0.544089 1.4:+76971001 MS.gene006179:CDS
GGGAATCAAGATCACTGCCC+AGG 0.545100 1.4:+76974694 MS.gene006179:CDS
TGAGTGATGAAATCGAGTTT+GGG 0.545205 1.4:+76970430 MS.gene006179:CDS
TCTGTATCTGAGTCTGCTAA+AGG 0.545690 1.4:+76970312 MS.gene006179:CDS
AGTACGTTGCACCAATCTGT+TGG 0.546668 1.4:-76972555 None:intergenic
CTCAAAGGGTTCGAAGAAAG+GGG 0.547303 1.4:+76970107 MS.gene006179:CDS
GAGTGGGAGGACTAAAGAAG+AGG 0.548679 1.4:+76970566 MS.gene006179:CDS
TTTGACAATTGGTTCAGGCT+CGG 0.549296 1.4:-76971534 None:intergenic
AGCAGGTTGTGCTGTAGCAG+GGG 0.552590 1.4:-76970628 None:intergenic
GGTATCAATAACCAGTAGAC+CGG 0.552679 1.4:-76972641 None:intergenic
ATGATCTGACTATGGAGGAA+TGG 0.553038 1.4:+76977036 MS.gene006179:CDS
AGAAGAAGCCCGGCGTTTGG+AGG 0.555273 1.4:+76971148 MS.gene006179:CDS
CTAATAGTAATAACATATCC+GGG 0.555274 1.4:-76973882 None:intergenic
GAGTAAAGCTATTCCGGAGG+AGG 0.555869 1.4:+76970281 MS.gene006179:CDS
CGGTGGAAAATCAAAGAAGA+AGG 0.555949 1.4:+76969528 MS.gene006179:CDS
CAACATCAATAGTAGTTCCA+TGG 0.556648 1.4:-76974089 None:intergenic
GCATTAGATGAGAATGATGA+TGG 0.559178 1.4:+76970147 MS.gene006179:CDS
TGTTCAAGAAGGTGAGGCTG+GGG 0.559825 1.4:+76972525 MS.gene006179:CDS
TGTTATTACTATTAGTTCAG+TGG 0.560033 1.4:+76973890 MS.gene006179:CDS
CATAGGCCCTGTACACAAGA+AGG 0.561171 1.4:+76975057 MS.gene006179:CDS
TTTCAGTGGTGAAGGAATCC+CGG 0.561971 1.4:+76973864 MS.gene006179:intron
GAAGGCACGGCAGACAGTTG+TGG 0.563477 1.4:-76972403 None:intergenic
ACAGAAACACTATCCTCCTC+CGG 0.563721 1.4:-76970294 None:intergenic
TCAAAGGGTTCGAAGAAGGC+AGG 0.566364 1.4:+76970249 MS.gene006179:CDS
ACTACTGGCTAGAAGAAAAG+AGG 0.566570 1.4:+76970947 MS.gene006179:CDS
AAGAAGAAGAGGAGCGACGA+AGG 0.568334 1.4:+76971012 MS.gene006179:CDS
ACAGGCCAAAGTTGTGGTTG+AGG 0.569051 1.4:+76972360 MS.gene006179:CDS
TGATGTCAATCTGAATGATA+GGG 0.569686 1.4:+76971484 MS.gene006179:CDS
GTAAGCAGAAAGAAGAAGCC+CGG 0.569714 1.4:+76971138 MS.gene006179:CDS
GGTAAGATCTTCAGAACACA+TGG 0.572020 1.4:-76975301 None:intergenic
ACACAAGAAGGATGTGATGA+AGG 0.572047 1.4:+76975069 MS.gene006179:CDS
CGGAGTGGAGGAGGTGTCAG+AGG 0.573069 1.4:+76969582 MS.gene006179:CDS
GCAGGATGATAAAGTTCAGC+CGG 0.573080 1.4:+76970665 MS.gene006179:CDS
GTGCCTTCTAAGCCGAGTGA+AGG 0.573219 1.4:+76972418 MS.gene006179:CDS
ATATTCTATCGGAGTGGAGG+AGG 0.574722 1.4:+76969573 MS.gene006179:CDS
GGATGCGGCTCCGGTTGCGG+TGG 0.575979 1.4:+76969603 MS.gene006179:CDS
GGGCATGACTCTTCCTGGCG+CGG 0.576478 1.4:+76971202 MS.gene006179:CDS
ATATCAATGAACTCTTGGGA+AGG 0.576746 1.4:-76975820 None:intergenic
GTTGCGGTGGAAGAGAAACC+CGG 0.576756 1.4:+76969616 MS.gene006179:CDS
AGAAAAGGAGAAGAAGGCAG+CGG 0.577587 1.4:+76970791 MS.gene006179:CDS
AGTAAGAGTGAAGAGGTCGT+TGG 0.577832 1.4:+76970510 MS.gene006179:CDS
GGGAAGAAGAAATCCTCGAA+GGG 0.578909 1.4:+76969931 MS.gene006179:intron
TATCAATGAACTCTTGGGAA+GGG 0.579843 1.4:-76975819 None:intergenic
TACTGCTGATTTAGATTCAG+AGG 0.580560 1.4:+76971343 MS.gene006179:CDS
GGGGAAGAAGAAGCCCTCAA+AGG 0.580807 1.4:+76970092 MS.gene006179:CDS
ACTTGAGAGACAGGCAGAAG+AGG 0.581232 1.4:+76971043 MS.gene006179:CDS
AGATGAAAGTGTTGAAGCAA+CGG 0.581844 1.4:+76971316 MS.gene006179:CDS
TTGGTCGTGGACATTATGCA+TGG 0.582868 1.4:+76972727 MS.gene006179:CDS
ATATTACCATTGTCAACACT+AGG 0.583473 1.4:-76970486 None:intergenic
AGGATTGACAGGAGTGGTGA+GGG 0.584013 1.4:+76974941 MS.gene006179:CDS
TGCTACAGCACAACCTGCTG+CGG 0.584367 1.4:+76970632 MS.gene006179:CDS
TTCAATAACTTGAGGTCTCG+GGG 0.585880 1.4:+76972679 MS.gene006179:CDS
TAGAAAACAGGCCAAAGTTG+TGG 0.586435 1.4:+76972354 MS.gene006179:CDS
TAATGGTGTTCTTCATGAAG+GGG 0.587624 1.4:+76974119 MS.gene006179:CDS
ACTTTATCATCCTGCTGAGG+AGG 0.588843 1.4:-76970657 None:intergenic
TTTATGGTTATTCTCAATGG+AGG 0.590292 1.4:-76975854 None:intergenic
TGCAAGATCCCTAGCTTCAG+GGG 0.591230 1.4:-76975155 None:intergenic
AGCTTTGGAAGACGTGGAGT+CGG 0.591536 1.4:+76974910 MS.gene006179:CDS
CCAGGGGCAGAACCTACTAC+AGG 0.591678 1.4:-76970690 None:intergenic
CGAGGTACCAATGTTCAAGA+AGG 0.591705 1.4:+76972514 MS.gene006179:CDS
GTTCAATATGAGGGTCACTC+AGG 0.592840 1.4:+76972997 MS.gene006179:CDS
TGAAGTTGTTGAAGAAGTAG+TGG 0.593967 1.4:+76971415 MS.gene006179:CDS
GGATGAAGATGATGATGTTG+AGG 0.594806 1.4:+76971436 MS.gene006179:CDS
GAGAATCCTCCGCCGCAACA+AGG 0.596347 1.4:+76969505 MS.gene006179:CDS
TGCAGCAAATTGGCGACCGA+AGG 0.597673 1.4:-76972444 None:intergenic
TGCCTTCTAAGCCGAGTGAA+GGG 0.599569 1.4:+76972419 MS.gene006179:CDS
CAGGATTGACAGGAGTGGTG+AGG 0.604875 1.4:+76974940 MS.gene006179:CDS
AAAATCAAAGAAGAAGGCTC+CGG 0.604903 1.4:+76969534 MS.gene006179:CDS
GGCGTTTGGAGGCAATGAGG+AGG 0.605409 1.4:+76971159 MS.gene006179:CDS
AAGGGTTCGAAGAAAGGTGG+TGG 0.607024 1.4:+76969949 MS.gene006179:CDS
AAAGGCAGCTTTGGAAGACG+TGG 0.608385 1.4:+76974904 MS.gene006179:CDS
TGGTGCTTCAGGAGAAAAGG+AGG 0.608601 1.4:+76970710 MS.gene006179:CDS
CTATTTATCAGACAAAGAAA+GGG 0.609015 1.4:+76971249 MS.gene006179:CDS
GATGACGATGAATATTCTAT+CGG 0.610557 1.4:+76969562 MS.gene006179:CDS
ATAATGCTTCCAATGAGCCA+AGG 0.611270 1.4:-76974985 None:intergenic
TTGCTGCATCATGGGTCATG+TGG 0.613343 1.4:+76972459 MS.gene006179:CDS
TACCAATGTTCAAGAAGGTG+AGG 0.614228 1.4:+76972519 MS.gene006179:CDS
TAATATAAGTAAGAGTGAAG+AGG 0.616758 1.4:+76970503 MS.gene006179:CDS
TTCACTCGGCTTAGAAGGCA+CGG 0.621700 1.4:-76972416 None:intergenic
CAGATTCTCAATAGCACAGG+GGG 0.622051 1.4:+76971182 MS.gene006179:CDS
AAATTGTGTCTTCAACAAGA+AGG 0.623805 1.4:+76975324 MS.gene006179:CDS
GGCAGATTCTCAATAGCACA+GGG 0.625757 1.4:+76971180 MS.gene006179:CDS
AACAGCAGAAAATGTTCGGG+AGG 0.628525 1.4:+76976276 MS.gene006179:CDS
TAATGCTTCCAATGAGCCAA+GGG 0.629489 1.4:-76974984 None:intergenic
CCCGGCGTTTGGAGGCAATG+AGG 0.629537 1.4:+76971156 MS.gene006179:CDS
TGAATATTCTATCGGAGTGG+AGG 0.629646 1.4:+76969570 MS.gene006179:CDS
TGTCAATAAAGCTCGAATTG+TGG 0.631490 1.4:-76974255 None:intergenic
AGGGAAGAAGAAATCCTCGA+AGG 0.633393 1.4:+76969930 MS.gene006179:intron
GAGTGAAAGTGTAAATGTTG+TGG 0.635334 1.4:+76970452 MS.gene006179:CDS
TCAGAATGAGTTCAATATGA+GGG 0.640267 1.4:+76972988 MS.gene006179:CDS
ATAGGATGATCTGACTATGG+AGG 0.643473 1.4:+76977031 MS.gene006179:intron
ACGAGTCATTCAATAACTTG+AGG 0.644529 1.4:+76972671 MS.gene006179:CDS
CTACTGGTTATTGATACCCC+AGG 0.645521 1.4:+76972646 MS.gene006179:CDS
TTGCGGTGGAAGAGAAACCC+GGG 0.650130 1.4:+76969617 MS.gene006179:CDS
TGGTGAGGAGAAATCGGACG+AGG 0.653929 1.4:+76970050 MS.gene006179:CDS
TTCATCTGTCTTGACAGCAG+CGG 0.655555 1.4:-76971300 None:intergenic
TCGAAGGGTTCGAAGAAAGG+TGG 0.660488 1.4:+76969946 MS.gene006179:CDS
TGAAAGTGTAAATGTTGTGG+AGG 0.660670 1.4:+76970455 MS.gene006179:CDS
CGATGAATATTCTATCGGAG+TGG 0.661588 1.4:+76969567 MS.gene006179:CDS
ATCATGGGTCATGTGGACAC+TGG 0.664092 1.4:+76972466 MS.gene006179:CDS
GTTCAAGAAGGTGAGGCTGG+GGG 0.665074 1.4:+76972526 MS.gene006179:CDS
ATTGAATGACTCGTGTCCTG+GGG 0.670625 1.4:-76972662 None:intergenic
TGGTGATGATGAGAAAGATG+AGG 0.670930 1.4:+76970335 MS.gene006179:CDS
TTGAGCAGGATTGACAGGAG+TGG 0.672991 1.4:+76974935 MS.gene006179:CDS
GTATCTGAGTCTGCTAAAGG+TGG 0.673325 1.4:+76970315 MS.gene006179:CDS
TGAACTTTATCATCCTGCTG+AGG 0.673872 1.4:-76970660 None:intergenic
GTATCAATAACCAGTAGACC+GGG 0.674744 1.4:-76972640 None:intergenic
AAGGGTTCGAAGAAGGCAGG+TGG 0.678507 1.4:+76970252 MS.gene006179:CDS
GAGAAGCCTAGTGTTGACAA+TGG 0.678840 1.4:+76970480 MS.gene006179:CDS
TCACTCAGTTCAAGGAACAA+GGG 0.682333 1.4:+76973114 MS.gene006179:CDS
GCGGAGGATTCTCGTCGTCG+CGG 0.685176 1.4:-76969495 None:intergenic
ATTGAGTAAAGCTATTCCGG+AGG 0.685642 1.4:+76970278 MS.gene006179:CDS
GGTGCTTCAGGAGAAAAGGA+GGG 0.687014 1.4:+76970711 MS.gene006179:CDS
AGCTGTAGAAGAGAAAGCTG+AGG 0.688379 1.4:+76970845 MS.gene006179:CDS
GATGTCAATCTGAATGATAG+GGG 0.693218 1.4:+76971485 MS.gene006179:CDS
TCAAAGGGTTCGAAGAAAGG+GGG 0.694476 1.4:+76970108 MS.gene006179:CDS
AATCCTCCGCCGCAACAAGG+CGG 0.709148 1.4:+76969508 MS.gene006179:CDS
TTACATGGACAACATTAAGG+AGG 0.709891 1.4:+76975243 MS.gene006179:CDS
GAACATACGTGAAAGAACCA+AGG 0.716522 1.4:+76972588 MS.gene006179:CDS
TAATGATAATGATAATGGTG+AGG 0.719083 1.4:+76970035 MS.gene006179:CDS
AAATGATTCGAAGACCAAAG+CGG 0.720285 1.4:+76970884 MS.gene006179:CDS
GTAAGATCTTCAGAACACAT+GGG 0.723306 1.4:-76975300 None:intergenic
TATGGAGGAATGGAAGCTGG+TGG 0.758669 1.4:+76977046 MS.gene006179:CDS
GCAGATTCTCAATAGCACAG+GGG 0.788332 1.4:+76971181 MS.gene006179:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr1.4 gene 76969472 76977100 76969472 ID=MS.gene006179
chr1.4 mRNA 76969472 76977100 76969472 ID=MS.gene006179.t1;Parent=MS.gene006179
chr1.4 exon 76969472 76969649 76969472 ID=MS.gene006179.t1.exon1;Parent=MS.gene006179.t1
chr1.4 CDS 76969472 76969649 76969472 ID=cds.MS.gene006179.t1;Parent=MS.gene006179.t1
chr1.4 exon 76969932 76971593 76969932 ID=MS.gene006179.t1.exon2;Parent=MS.gene006179.t1
chr1.4 CDS 76969932 76971593 76969932 ID=cds.MS.gene006179.t1;Parent=MS.gene006179.t1
chr1.4 exon 76972305 76972825 76972305 ID=MS.gene006179.t1.exon3;Parent=MS.gene006179.t1
chr1.4 CDS 76972305 76972825 76972305 ID=cds.MS.gene006179.t1;Parent=MS.gene006179.t1
chr1.4 exon 76972911 76973018 76972911 ID=MS.gene006179.t1.exon4;Parent=MS.gene006179.t1
chr1.4 CDS 76972911 76973018 76972911 ID=cds.MS.gene006179.t1;Parent=MS.gene006179.t1
chr1.4 exon 76973110 76973210 76973110 ID=MS.gene006179.t1.exon5;Parent=MS.gene006179.t1
chr1.4 CDS 76973110 76973210 76973110 ID=cds.MS.gene006179.t1;Parent=MS.gene006179.t1
chr1.4 exon 76973870 76973960 76973870 ID=MS.gene006179.t1.exon6;Parent=MS.gene006179.t1
chr1.4 CDS 76973870 76973960 76973870 ID=cds.MS.gene006179.t1;Parent=MS.gene006179.t1
chr1.4 exon 76974057 76974167 76974057 ID=MS.gene006179.t1.exon7;Parent=MS.gene006179.t1
chr1.4 CDS 76974057 76974167 76974057 ID=cds.MS.gene006179.t1;Parent=MS.gene006179.t1
chr1.4 exon 76974242 76974307 76974242 ID=MS.gene006179.t1.exon8;Parent=MS.gene006179.t1
chr1.4 CDS 76974242 76974307 76974242 ID=cds.MS.gene006179.t1;Parent=MS.gene006179.t1
chr1.4 exon 76974656 76974715 76974656 ID=MS.gene006179.t1.exon9;Parent=MS.gene006179.t1
chr1.4 CDS 76974656 76974715 76974656 ID=cds.MS.gene006179.t1;Parent=MS.gene006179.t1
chr1.4 exon 76974833 76975390 76974833 ID=MS.gene006179.t1.exon10;Parent=MS.gene006179.t1
chr1.4 CDS 76974833 76975390 76974833 ID=cds.MS.gene006179.t1;Parent=MS.gene006179.t1
chr1.4 exon 76975799 76975918 76975799 ID=MS.gene006179.t1.exon11;Parent=MS.gene006179.t1
chr1.4 CDS 76975799 76975918 76975799 ID=cds.MS.gene006179.t1;Parent=MS.gene006179.t1
chr1.4 exon 76976254 76976373 76976254 ID=MS.gene006179.t1.exon12;Parent=MS.gene006179.t1
chr1.4 CDS 76976254 76976373 76976254 ID=cds.MS.gene006179.t1;Parent=MS.gene006179.t1
chr1.4 exon 76977035 76977100 76977035 ID=MS.gene006179.t1.exon13;Parent=MS.gene006179.t1
chr1.4 CDS 76977035 76977100 76977035 ID=cds.MS.gene006179.t1;Parent=MS.gene006179.t1
Gene Sequence

>MS.gene006179

ATGGGGAAGAAGAAGCCAGCAATCCGCGACGACGAGAATCCTCCGCCGCAACAAGGCGGTGGAAAATCAAAGAAGAAGGCTCCGGTTATCGATGACGATGAATATTCTATCGGAGTGGAGGAGGTGTCAGAGGATGCGGCTCCGGTTGCGGTGGAAGAGAAACCCGGGAAAAAGAAAGGTAAGAAAGGTAATGCTAAATCCAAAAAAGATAATGATGATGATGATTTTGATGATGCTGTTGTTGTTGTTGATGATGATGATGTGAATGAAATTGTTTTTGCTGGGAAGAAAAAAGGGAAATCGAAAAAAAGTGGTGGTGGTAGTAGTGGTGGAAGTGTGTTTGCTTCTGGATTTGGTGTGCTTGGTGATGAGGACGATGTTGATAATGATGATGAAGAGAAATCGGAGGTAACTGGTGAGGGCGATGACGATGAGGATGAACCGGTTGTTAGCTTTACAGGGAAGAAGAAATCCTCGAAGGGTTCGAAGAAAGGTGGTGGTGGTGGAAGTGTGTTTACGGCTGCAGCTGGTTTTGGTTTGCTTGGGGATGAGGAAGATGGTGATAATGATAATGATAATGGTGAGGAGAAATCGGACGAGGATGAACCTGTTGTTTTTTCGGGGAAGAAGAAGCCCTCAAAGGGTTCGAAGAAAGGGGGAAGTAGTTTGTTCAGTGCATTAGATGAGAATGATGATGGAGAAGAGGAGAGTAAGAATGAAAAGGTAGAAGACGATGATGATGAACCAATCACTTTCTCGGGTAAGAAAAAGAAGTCATCAAAGGGTTCGAAGAAGGCAGGTGGTTCATTGAGTAAAGCTATTCCGGAGGAGGATAGTGTTTCTGTATCTGAGTCTGCTAAAGGTGGTGATGATGAGAAAGATGAGGATGATGTTTCTTTTGCATTTACTGGTAAAAAGAAGTCTTCTAAAAAGAAAAGTGGTAGTGCTTCTGCCAAAGTGAGTGATGAAATCGAGTTTGGGAGTGAAAGTGTAAATGTTGTGGAGGCTGAGAAGCCTAGTGTTGACAATGGTAATATAAGTAAGAGTGAAGAGGTCGTTGGAACTTCCAAGAATAAGAAAAAGAATAAGAAGAAGAGTGGGAGGACTAAAGAAGAGGAGGATGATTTAGATAAGCTTCTCGCAGAGCTTGGCGAAGCCCCTGCTACAGCACAACCTGCTGCGGCTCCTCCTCAGCAGGATGATAAAGTTCAGCCGGTTCCTGTAGTAGGTTCTGCCCCTGGTGCTTCAGGAGAAAAGGAGGGAGAAGATGAGACTGTAGAGTCAGCTGCCGCAAAAAAGAAGAAAAAGAAGAAGGAAAAAGAAAAGGAGAAGAAGGCAGCGGCAGCAGCAGCTGGAAGTGCACCGGTAATTGAAGCTGTAGAAGAGAAAGCTGAGGCAATTGAACCGAAGAAAAATGATTCGAAGACCAAAGCGGCTGACAAGAAAGTGCCAAAGCATGTTAGGGAGATGCAAGAACTACTGGCTAGAAGAAAAGAGGCTGAAGAAAAAAAGAAAAAGGAAGAGGAAGAGAAGCAAAGGAAAGAAGAAGAGGAGCGACGAAGGATAGAGGAACTTGAGAGACAGGCAGAAGAGGCTAAACGTAGAAAGAAGGAAAAAGAAAAGGAGAAACTCCTGAAAAAGAAGCAGGAAGGTAAATTGTTAACTGGTAAGCAGAAAGAAGAAGCCCGGCGTTTGGAGGCAATGAGGAGGCAGATTCTCAATAGCACAGGGGGCATGACTCTTCCTGGCGCGGACACTGGTGGACCATCCAAAAAACCTATTTATCAGACAAAGAAAGGGAAAACAACGAATCGAAATCATAATGGTGCCGCTGCTGTCAAGACAGATGAAAGTGTTGAAGCAACGGAAACTACTGCTGATTTAGATTCAGAGGAACCTGAAAAGGTTGAAGAAGTGGAGATGGAGGACAAAGTTGAACTTCCTGAAGTTGTTGAAGAAGTAGTGGATGAAGATGATGATGTTGAGGATGAATGGGATGCAAAAAGCTGGGATGATGTCAATCTGAATGATAGGGGTGCATTTGCTGATGAAGAAGTTGACTCCGAGCCTGAACCAATTGTCAAAAAAGAGATTAAAAATGGCATACCTTCTAAAAATGCTGGTGAGTTTTGCATTCTATTGGTAGTTTTTACTTTTTCCTAACATTTATGCTTGAAACTTTTGTAATTGTTGAAAACATGCTTGATACCATATCAGTTTTGGGTCCTATTGCTTCTTGGTTTTTTCGTACCTCACTAGCATAGGAAATATATGAGCCTACTCTAGTGTTAGAATTTTAGAAATATAAATTGATGCTACTTTGGAATATTTTATGGTCAAGACCTTAGTTTTTGAATTTTTTTCTGCTGGCAAGTGATCAAACTTTTGTGCATATTAATGTTGTAACCTAATAATGTCACCGGCTGCAATAAACTAGTAAATTATTGTGGGATACCCTTTCTTCCTTTGACTGCAGCAATTGGTTTCAAACCTGGAATTATGGCAGTGATAAAATTTTCCTGGTTTATATTTGCCAACACTGTATTTCTATTTCTTCCTTTGCTTCAGATAAGCATAGGATATGTTTTTTATACTTCATTGACAGTAGACCACCAAGTATTAGATCTCCCTGTATCTTGTAGGCGTGGCCAAACTTTTGTCTGTGTCAAGTGGCCTAATAATGTTTGATTGACCTGCGGAGCCAACCCCCTTCTCTAGTTGGATGGGGCATGATATTTGGCATATACTTTTGTTTACCTTGTAAAATTTAATACTTTAATTTAACTACTTTTCTGCTTATTTATATTTTGCTTTGCTTTTTCTTCCACAGCAGGTGCTACAAATAAACCTGTTACGAAGCCTGCAGCTGAAGAAACTGAAGATAGAAAACAGGCCAAAGTTGTGGTTGAGGATAAAAAGAAAAGGCACGATCCACAACTGTCTGCCGTGCCTTCTAAGCCGAGTGAAGGGAACCTTCGGTCGCCAATTTGCTGCATCATGGGTCATGTGGACACTGGCAAAACCAAGCTTCTGGATTGCATTCGAGGTACCAATGTTCAAGAAGGTGAGGCTGGGGGTATCACCCAACAGATTGGTGCAACGTACTTTCCTGCTGAGAACATACGTGAAAGAACCAAGGAACTGAAAGCTGATGCAACACTGAAAGTTCCCGGTCTACTGGTTATTGATACCCCAGGACACGAGTCATTCAATAACTTGAGGTCTCGGGGTTCAGGTCTATGTGATATTGCAATTTTGGTCGTGGACATTATGCATGGCTTAGAGCCACAAACTATAGAGTCACTCAATCTATTAAAAATGAGGAACACTGAATTCATTGTTGCATTGAATAAGGTGAGTATACTCTCATGAGCTACTACTTCCAATATATGTTTTTTACAGGTTGTTCAACTCTGTCACTGTTCTCGCAACATTGCAGGTTGACAGGCTTTATGGCTGGAAAACATGTCGCAATGCTCCAATTCGTAAAGCAATGACACAGCAGTCTAAGGATGTTCAGAATGAGTTCAATATGAGGGTCACTCAGGTAGTAAAGTTTTTTTGTTTTTGTTTTTGGTAAGTTGTGGTAGATTGTTTGTTAACGTTCGCCATACTAATTTTTCTTGTTTCATTTCTAGATTGTCACTCAGTTCAAGGAACAAGGGCTAAATACAGAATTGTATTACAAAAACAAAGAAATGGGCGAGACATTCAGCATTGTGCCTACAAGTGCAATAAGGTAACTGTGTAGCCTTGTAGCCATAATACCTCTTTTGTGTAGCATTGTATTACAAAAGGGATTTTGTTCCCCTCCATTTTACCCCTACCAACCACCATATTGATGTTCCAGATGGGAGATTTTGTTTTCCTGCATCCAAGACTCAAATCCACAGCTTTTTAGTCACATGAAAACAACCCCAAGCCGTTGAGGCGATTACATATGTAATCTTTTGTAGTGCCAATGCTAGGATGTTGAATTGTATTTACTGTTGTAACTTTAAATAGTGTTGACGATAATATAGGAAATAACTTACAATACTGCCTACATTTTTTAAGATGCCTACATTTTACATCAATTATTTTGTTGGTAACAGGCAAGTATCTTATCTTCTTGCATCTGCTTTAGCATTTTCACTATCATTAGAAAGAGGCGTCTTTGATTGTTTCAAACATTCTAGTGTGTTTCAGAACATCTCAGCTTTTTTTGGTATCCCCCAAATTGTGTCTAACTTGTCTGTGCTCTACGTGAAATCATCCAAAGGATGATAATTTGGTAGGAGCAGAGGATGAATGCCAAATCTTTGTTTCGGGCAAAAACCATAACTATAGTATTACATATAATCTGCTGAATACTTTGTCGGTGTTTTTGTACTGATGTTTTAGTATTTAATATTTCAGTGGTGAAGGAATCCCGGATATGTTATTACTATTAGTTCAGTGGACCCAAAAGACCATGACCGAGAAGCTTACATACAGCGAAGAAGTGCAGGTTAGCCATCACTTGATGTTGAAGTGGTTGAATGCTTCTTGATCGTTTAACAATAGAGACCTAACTGTTTAACTGTTATTTGACTGTGGCTACCAGTGTACCGTTTTGGAAGTCAAGGTTATTGAAGGCCATGGAACTACTATTGATGTTGTTTTAGTTAATGGTGTTCTTCATGAAGGGGATCAAATAGTTGTATCTGGAATGCAGGCAAGCATCTCAGACTATAACCACATGTATTAATACTTGCTTTCTGCTTCTAACTAATAAAGTTTATAATATAGGGTCCAATTGTTACCACAATTCGAGCTTTATTGACACCTCATCCAATGAAGGAACTTCGTGTTAAGGTACCATTATATCTTTTGCATTCGATTTATTTTAAAGCTGGTTTGGGTAGGAAAAAGGGATTTAGAAATTTGAATGGGTCAATGGAGGCAAATGATAAATAACGTGTTAGAAGCTTAGGAAATGATTATGAGATGTTTAACATGAAGGAACCGAGTTATAGCAAGTATAGTTGTTCATAGCTCATATTGTTATGCTGAAGAGGTGGTCATTTTTCCATCATTGGAATTTGGAATATGTCAATTGAGGGGATGGGAAACATCCTCTTTAGTCTGAGGGGCCTTTAACAGAGGAGCTATATTTTGCTATTTAGTATGTCTTCCAGCTAAGTAATGGTTGTCTAATTTCAGGGATCATATATCCATCACAAAGAAATCAAAGCTGCTATGGGAATCAAGATCACTGCCCAGGTACTTAATGATATTGATCTGACTTTTATGCCAGTTTATATAACTATGGTTTTCTTCGTTTATTGTTTATAAATGTGTAGAGAATCAGATATTTGATATGATTTCTTGCTATTTCAGGGGCTTGAACATGCTATTGCTGGAGCTAGTTTATATGTGGTAAAGCCTGATGATGATTTGGAATATATTAAAAAGGCAGCTTTGGAAGACGTGGAGTCGGTCTTGAGCAGGATTGACAGGAGTGGTGAGGGCGTTTGTGTCCAGGCATCTACCCTTGGCTCATTGGAAGCATTATTGGAGTTTCTGAAAACTCCAGAAGTGAATATTCCTGTTAGTGCTATAAACATAGGCCCTGTACACAAGAAGGATGTGATGAAGGCCAGTGTAATGCTTGAAAAGAAACGAGAGTATGCTACTATATTGGCATTTGATGTCAAAGTCACCCCTGAAGCTAGGGATCTTGCAGAAGAATTGGGTGTGAAAATTTTTATAGCGGATATCATTTATCATCTATTTGATCAATTTAAGGCTTACATGGACAACATTAAGGAGGAGAAAAAGAAAGAATCTGCGGATGAGGCAGTCTTCCCATGTGTTCTGAAGATCTTACCAAATTGTGTCTTCAACAAGAAGGATCCGATTGTTTTGGGAGTTGATATCCTTGAAGGCATTTTAAAGGTATTTTTTTTTTTTTTTAATTCAGATGAACTTTTTTCAATGTGGTTGCAATGTTTGTGATGATAGCAGTTTTCTCTGCATAAGATTGTATTGCTTGCCTTGGTATAAATTCATTAGTTGTACTTTAGTATTGCACTTGCATCTGTATTTGAAAAAGGAATTAGCAATTTTATATTTATGGCCTATGGATAAGTTTAGGCTGCTGCGGTTAAAATGAGGAGATAGAAATTTTGGAACGAAATGATTCACCTTCTGATACAGTAAAAATGTTGAAAGATTGAACTTGCTGTGCAACAAAATTTGTTTTGTTTCTTCACACTTGCTATGTAAATTTGTACCCTGTTATGTGTTCAATGCACAATTTGTTTGGTTTCTTTTAGCTTGCTCCTAATATTGTCTACTTGACAGATTGGAACTCCAATTTGTATCCCTTCCCAAGAGTTCATTGATATTGGTCGCATTGCCTCCATTGAGAATAACCATAAACCGGTTGATTATGCGAAGAAAGGGCAGAAAGTAGCCATTAAGGTATGTGCTTGAATTAAAGTTGAATTTTACATAATGAACTTGTCTGAACTCAGTTATTTTCCCCATTAAACGAAGTTTGAGATATGGATTTAAAACATTTTATTTGTACTATGATTGAGCGATGTTGGAAAGGTAAAGATGATTAATGTCTGTTTTAAGTTCTGTGTAACAATAGTTTATTATATAAACTAACTTGTTTACACCGATGGAAAAGTGACATCCATTTTCACTGATTTACAGGTGGTCTATCTTTAGACTTGGTTATTGAGAAAGAAATAAAAATGTATAGAGGTGAATAAGATAAGTGTTAATGTTCTGTTCAACTTCGTTTGCAGATTGTTGGCAGCAATTCTGAAGAACAGCAGAAAATGTTCGGGAGGCATTTTGAGATTGATGATGAACTTGTAAGCCATATTTCACGGAGATCTATTGATATTCTCAAAACTAATTATCGGGTAAGTCATCAATAACAACAATAATAAATAAATTTGTCAGTAATGATGTGTTTCTAACCAGAGTAATGATAACTCAACACACTTTTTTTGACACAAACACCAATGACTGTTCACCATGCTTATACGGTAACAGTACAATTTTTTGGCAATGTTTTTTTTATTAAAAAAGAACATACATATTTTTTTTAATATGGATGAGGATTTTCTTAACACAATTTGAGTTGTGTTAACCAATTTCACTACTGCATTAAGGAAAAAAGTGTACGCTGTTGACCACTTTTGGAACATAAATTTCATTTGCCACTTTGACTATATTAACCCGAAAAATGCAAAGCATAACCACTTATTTTACATAGTTTCAAAAAATTCACAGAAGTACATGGATTCCGAAAGTGGTTAATAATATACATTTTTTGTGGTTAATGAAGTCGCGAAATTGGTTGATGACAACTAAATTTTTGTGTTACAAAAAATACTCCTCTTTTTCTTAGGAAAAAAAATTAAGTAAAAAATTGACCCAAAAAAGGGTACTGTTCACCGTATAAAGGTGTGGTATATGTAAAAAAAAAAAAAGTATGTCCAGTTATCATTACTCATTTAACTATTATTGGATTTTGTTGGACTGTCTCTTAAAAGTTATACCATTGAATTATTGACATAGGATGATCTGACTATGGAGGAATGGAAGCTGGTGGTTAAATTGAAGACTTTGTTCAAGATACAATAA
Protein sequence

>MS.gene006179.t1

MGKKKPAIRDDENPPPQQGGGKSKKKAPVIDDDEYSIGVEEVSEDAAPVAVEEKPGKKKGKKKSSKGSKKGGGGGSVFTAAAGFGLLGDEEDGDNDNDNGEEKSDEDEPVVFSGKKKPSKGSKKGGSSLFSALDENDDGEEESKNEKVEDDDDEPITFSGKKKKSSKGSKKAGGSLSKAIPEEDSVSVSESAKGGDDEKDEDDVSFAFTGKKKSSKKKSGSASAKVSDEIEFGSESVNVVEAEKPSVDNGNISKSEEVVGTSKNKKKNKKKSGRTKEEEDDLDKLLAELGEAPATAQPAAAPPQQDDKVQPVPVVGSAPGASGEKEGEDETVESAAAKKKKKKKEKEKEKKAAAAAAGSAPVIEAVEEKAEAIEPKKNDSKTKAADKKVPKHVREMQELLARRKEAEEKKKKEEEEKQRKEEEERRRIEELERQAEEAKRRKKEKEKEKLLKKKQEGKLLTGKQKEEARRLEAMRRQILNSTGGMTLPGADTGGPSKKPIYQTKKGKTTNRNHNGAAAVKTDESVEATETTADLDSEEPEKVEEVEMEDKVELPEVVEEVVDEDDDVEDEWDAKSWDDVNLNDRGAFADEEVDSEPEPIVKKEIKNGIPSKNAGATNKPVTKPAAEETEDRKQAKVVVEDKKKRHDPQLSAVPSKPSEGNLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELKADATLKVPGLLVIDTPGHESFNNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLKMRNTEFIVALNKVDRLYGWKTCRNAPIRKAMTQQSKDVQNEFNMRVTQIVTQFKEQGLNTELYYKNKEMGETFSIVPTSAISGEGIPDMLLLLVQWTQKTMTEKLTYSEEVQCTVLEVKVIEGHGTTIDVVLVNGVLHEGDQIVVSGMQGPIVTTIRALLTPHPMKELRVKGSYIHHKEIKAAMGIKITAQGLEHAIAGASLYVVKPDDDLEYIKKAALEDVESVLSRIDRSGEGVCVQASTLGSLEALLEFLKTPEVNIPVSAINIGPVHKKDVMKASVMLEKKREYATILAFDVKVTPEARDLAEELGVKIFIADIIYHLFDQFKAYMDNIKEEKKKESADEAVFPCVLKILPNCVFNKKDPIVLGVDILEGILKIGTPICIPSQEFIDIGRIASIENNHKPVDYAKKGQKVAIKIVGSNSEEQQKMFGRHFEIDDELVSHISRRSIDILKTNYRDDLTMEEWKLVVKLKTLFKIQ