Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054186.t1 | XP_013452171.1 | 99.6 | 239 | 1 | 0 | 73 | 311 | 71 | 309 | 8.70E-132 | 479.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054186.t1 | Q94AH9 | 90.3 | 238 | 23 | 0 | 73 | 310 | 80 | 317 | 1.7e-123 | 443.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054186.t1 | A0A072UK33 | 99.6 | 239 | 1 | 0 | 73 | 311 | 39 | 277 | 6.2e-132 | 479.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054186 | MS.gene056257 | 0.813182 | 2.91E-51 | -1.69E-46 |
| MS.gene054186 | MS.gene059422 | 0.913235 | 7.79E-84 | -1.69E-46 |
| MS.gene054186 | MS.gene08538 | 0.800093 | 1.69E-48 | -1.69E-46 |
| MS.gene054186 | MS.gene41916 | 0.997835 | 3.34E-250 | -1.69E-46 |
| MS.gene054186 | MS.gene66053 | 0.813911 | 2.01E-51 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054186.t1 | MTR_6g047580 | 99.035 | 311 | 1 | 1 | 1 | 311 | 1 | 309 | 0.0 | 606 |
| MS.gene054186.t1 | MTR_6g047580 | 88.746 | 311 | 1 | 2 | 1 | 311 | 1 | 277 | 0.0 | 535 |
| MS.gene054186.t1 | MTR_1g114000 | 97.143 | 245 | 7 | 0 | 67 | 311 | 69 | 313 | 1.87e-177 | 493 |
| MS.gene054186.t1 | MTR_6g047580 | 98.425 | 254 | 2 | 1 | 1 | 254 | 1 | 252 | 1.13e-174 | 484 |
| MS.gene054186.t1 | MTR_6g047580 | 88.506 | 261 | 26 | 2 | 1 | 261 | 1 | 257 | 2.29e-157 | 440 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054186.t1 | AT4G25630 | 90.574 | 244 | 23 | 0 | 67 | 310 | 74 | 317 | 7.22e-167 | 466 |
| MS.gene054186.t1 | AT5G52470 | 90.909 | 242 | 22 | 0 | 67 | 308 | 63 | 304 | 5.83e-166 | 464 |
| MS.gene054186.t1 | AT5G52490 | 62.745 | 306 | 100 | 1 | 1 | 306 | 1 | 292 | 4.15e-122 | 352 |
| MS.gene054186.t1 | AT5G52470 | 93.902 | 164 | 10 | 0 | 67 | 230 | 63 | 226 | 5.61e-111 | 323 |
Find 0 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTTATCATATTTGATAT+GGG | - | 42608:10288-10307 | MS.gene054186:CDS | 10.0% |
| !! | TTAATTTATCATATTTGATA+TGG | - | 42608:10287-10306 | MS.gene054186:CDS | 10.0% |
| !!! | AGTTAATTGATTAAATTTTT+TGG | - | 42608:10624-10643 | MS.gene054186:intron | 10.0% |
| !!! | ATTTTTAACTTAATCTATTA+GGG | + | 42608:12224-12243 | None:intergenic | 10.0% |
| !!! | TATTTTTAACTTAATCTATT+AGG | + | 42608:12225-12244 | None:intergenic | 10.0% |
| !!! | TTATTTTGTCATAATTAATA+TGG | - | 42608:10586-10605 | MS.gene054186:intron | 10.0% |
| !!! | TTTAATCAATTTATTTTGTA+TGG | - | 42608:15070-15089 | MS.gene054186:intron | 10.0% |
| !! | AAGTCATATCAAATTAAATT+TGG | + | 42608:13985-14004 | None:intergenic | 15.0% |
| !! | AATTAAATTGAAACAGAAAA+AGG | + | 42608:10223-10242 | None:intergenic | 15.0% |
| !! | AGTAAAATTATAAAGAAAAG+AGG | + | 42608:14853-14872 | None:intergenic | 15.0% |
| !! | ATTATGACAAAATAAACAAA+AGG | + | 42608:10581-10600 | None:intergenic | 15.0% |
| !! | TAAATAATGAAAAATCTGAA+AGG | + | 42608:13711-13730 | None:intergenic | 15.0% |
| !! | TTATGACAAAATAAACAAAA+GGG | + | 42608:10580-10599 | None:intergenic | 15.0% |
| !! | TTATTTATTTATTAACCGAA+AGG | - | 42608:11858-11877 | MS.gene054186:intron | 15.0% |
| !! | TTCAAAATGTCAAATAAAAA+TGG | + | 42608:13678-13697 | None:intergenic | 15.0% |
| !! | TTCATTTATTGAAATCAAAT+GGG | - | 42608:10680-10699 | MS.gene054186:intron | 15.0% |
| !! | TTCATTTGTTTAAATCAAAT+GGG | - | 42608:10794-10813 | MS.gene054186:intron | 15.0% |
| !! | TTTCATTTATTGAAATCAAA+TGG | - | 42608:10679-10698 | MS.gene054186:intron | 15.0% |
| !! | TTTCATTTGTTTAAATCAAA+TGG | - | 42608:10793-10812 | MS.gene054186:intron | 15.0% |
| !!! | CTTTTTAAATTTTAACTGAA+TGG | - | 42608:11450-11469 | MS.gene054186:intron | 15.0% |
| !!! | TCATTTTTCTAAATTATTGT+TGG | + | 42608:12004-12023 | None:intergenic | 15.0% |
| !!! | TGATTAAATTTTTTGGATTT+TGG | - | 42608:10631-10650 | MS.gene054186:intron | 15.0% |
| !!! | TTTTTAACTTAATCTATTAG+GGG | + | 42608:12223-12242 | None:intergenic | 15.0% |
| !!! | TTTTTAAGTTTGTTTTGTAT+TGG | - | 42608:14971-14990 | MS.gene054186:intron | 15.0% |
| !! | AAAATTGATTAAGCTTATGA+AGG | + | 42608:11800-11819 | None:intergenic | 20.0% |
| !! | AAATTGATATATAGACTATG+TGG | + | 42608:14438-14457 | None:intergenic | 20.0% |
| !! | AATATGATAAATTAAACACG+AGG | + | 42608:10282-10301 | None:intergenic | 20.0% |
| !! | ATAGTTGAAAGAAAATTACT+GGG | + | 42608:11592-11611 | None:intergenic | 20.0% |
| !! | ATATAACATATATAACGTTC+AGG | + | 42608:13291-13310 | None:intergenic | 20.0% |
| !! | ATATGATAAATTAAACACGA+GGG | + | 42608:10281-10300 | None:intergenic | 20.0% |
| !! | ATGGAAAACAAAAAAAAAAG+GGG | + | 42608:13478-13497 | None:intergenic | 20.0% |
| !! | CAAAACAAACTTAAAAAACA+AGG | + | 42608:14968-14987 | None:intergenic | 20.0% |
| !! | CATTCATTTCAAAGTATAAA+AGG | - | 42608:13498-13517 | MS.gene054186:intron | 20.0% |
| !! | CATTTATACCCTTTAAATAA+CGG | - | 42608:11693-11712 | MS.gene054186:intron | 20.0% |
| !! | CCTTGATAGATATATAAAAA+TGG | + | 42608:14712-14731 | None:intergenic | 20.0% |
| !! | GATGGAAAACAAAAAAAAAA+GGG | + | 42608:13479-13498 | None:intergenic | 20.0% |
| !! | TGATGGAAAACAAAAAAAAA+AGG | + | 42608:13480-13499 | None:intergenic | 20.0% |
| !! | TTAAATTCCTAAAAACTGAA+AGG | + | 42608:14074-14093 | None:intergenic | 20.0% |
| !! | TTTCTTAAAAATGAATTCCT+GGG | - | 42608:12082-12101 | MS.gene054186:intron | 20.0% |
| !!! | AAATTTTAACTGAATGGTAA+GGG | - | 42608:11456-11475 | MS.gene054186:intron | 20.0% |
| !!! | AGATATATAGATTTTAAGCT+AGG | + | 42608:10928-10947 | None:intergenic | 20.0% |
| !!! | ATCAATTTATTTTGTATGGT+AGG | - | 42608:15074-15093 | MS.gene054186:intron | 20.0% |
| !!! | ATTTTTTCCTTTCAGTTTTT+AGG | - | 42608:14064-14083 | MS.gene054186:CDS | 20.0% |
| !!! | CCATTTTTATATATCTATCA+AGG | - | 42608:14709-14728 | MS.gene054186:intron | 20.0% |
| !!! | GTATTTAGGTTATATATTTC+CGG | - | 42608:14772-14791 | MS.gene054186:intron | 20.0% |
| !!! | GTTTTCATTTTAGTTTTCAT+TGG | - | 42608:15004-15023 | MS.gene054186:intron | 20.0% |
| !!! | TAAATTTTAACTGAATGGTA+AGG | - | 42608:11455-11474 | MS.gene054186:intron | 20.0% |
| !!! | TAGTCTATTTTATAGAGTAA+GGG | - | 42608:12038-12057 | MS.gene054186:intron | 20.0% |
| !!! | TATTTAGGTTATATATTTCC+GGG | - | 42608:14773-14792 | MS.gene054186:intron | 20.0% |
| !!! | TGTGATAATAAGAAGTATTT+GGG | + | 42608:14487-14506 | None:intergenic | 20.0% |
| !!! | TTAGCTTTATTTGTTGAAAT+GGG | - | 42608:10386-10405 | MS.gene054186:intron | 20.0% |
| !!! | TTATACTTTGAAATGAATGA+TGG | + | 42608:13497-13516 | None:intergenic | 20.0% |
| !!! | TTATGACTTTTATCACAATA+AGG | - | 42608:14742-14761 | MS.gene054186:intron | 20.0% |
| !!! | TTATTTGACATTTTGAAGTT+TGG | - | 42608:13681-13700 | MS.gene054186:intron | 20.0% |
| !!! | TTCTATTTTATAAAGAAACC+TGG | - | 42608:12800-12819 | MS.gene054186:CDS | 20.0% |
| !!! | TTGTGATAATAAGAAGTATT+TGG | + | 42608:14488-14507 | None:intergenic | 20.0% |
| !!! | TTTAGCTTTATTTGTTGAAA+TGG | - | 42608:10385-10404 | MS.gene054186:intron | 20.0% |
| !!! | TTTGATAGCATTAATAAAAG+TGG | - | 42608:11909-11928 | MS.gene054186:intron | 20.0% |
| !!! | TTTTAACTTAATCTATTAGG+GGG | + | 42608:12222-12241 | None:intergenic | 20.0% |
| !!! | TTTTCTTAAAAATGAATTCC+TGG | - | 42608:12081-12100 | MS.gene054186:intron | 20.0% |
| ! | AAATCATTTATTCCCATGTT+TGG | - | 42608:11527-11546 | MS.gene054186:CDS | 25.0% |
| ! | AACAAACTTAAAAAACAAGG+AGG | + | 42608:14965-14984 | None:intergenic | 25.0% |
| ! | AATAAGGCAAAGTTGTATTT+AGG | - | 42608:14758-14777 | MS.gene054186:intron | 25.0% |
| ! | ACTTCTTATTATCACAAAGT+TGG | - | 42608:14491-14510 | MS.gene054186:intron | 25.0% |
| ! | AGTTGATTGAATAGAAAGTT+TGG | - | 42608:10325-10344 | MS.gene054186:CDS | 25.0% |
| ! | ATTATTTGCATGGTTTGAAA+AGG | + | 42608:12450-12469 | None:intergenic | 25.0% |
| ! | CAAAAGTTGAGTATAGAATT+TGG | - | 42608:12640-12659 | MS.gene054186:intron | 25.0% |
| ! | CATAGTTGAAAGAAAATTAC+TGG | + | 42608:11593-11612 | None:intergenic | 25.0% |
| ! | GTAATGACACAATAAACTAA+CGG | + | 42608:12580-12599 | None:intergenic | 25.0% |
| ! | TAAGAAGACAGTTATATACT+TGG | + | 42608:13340-13359 | None:intergenic | 25.0% |
| ! | TATCATATTTGATATGGGTT+TGG | - | 42608:10293-10312 | MS.gene054186:CDS | 25.0% |
| ! | TGTTTCGTTATCTGTATATT+GGG | - | 42608:14014-14033 | MS.gene054186:intron | 25.0% |
| ! | TTGTTTCGTTATCTGTATAT+TGG | - | 42608:14013-14032 | MS.gene054186:intron | 25.0% |
| ! | TTTATTGTTCTAACACCTTT+CGG | + | 42608:11876-11895 | None:intergenic | 25.0% |
| !! | AAAGTGTTTGGTTGTTAATT+TGG | + | 42608:12110-12129 | None:intergenic | 25.0% |
| !! | AGTTTTCATTGGATAGTAAA+TGG | - | 42608:15015-15034 | MS.gene054186:intron | 25.0% |
| !! | ATCTGATTGATTGTTTTCTA+TGG | - | 42608:13732-13751 | MS.gene054186:intron | 25.0% |
| !! | ATTTTAAGCTAGGCTTTTAT+CGG | + | 42608:10918-10937 | None:intergenic | 25.0% |
| !! | CTAGTCTATTTTATAGAGTA+AGG | - | 42608:12037-12056 | MS.gene054186:intron | 25.0% |
| !! | TCAAATGGGTTTATAGTAAT+AGG | - | 42608:10694-10713 | MS.gene054186:intron | 25.0% |
| !!! | AAAAGAGGATATTTAGTTTG+TGG | + | 42608:14838-14857 | None:intergenic | 25.0% |
| !!! | AATTTTAACTGAATGGTAAG+GGG | - | 42608:11457-11476 | MS.gene054186:intron | 25.0% |
| !!! | CACTGATTTATCTTAAATGA+TGG | - | 42608:13249-13268 | MS.gene054186:intron | 25.0% |
| !!! | TCATTGATGATGTTTTTGTT+GGG | - | 42608:10656-10675 | MS.gene054186:intron | 25.0% |
| !!! | TCATTTTGTTATATCCATCA+AGG | - | 42608:13947-13966 | MS.gene054186:intron | 25.0% |
| !!! | TGCTTTTATTGATTGAATGT+AGG | - | 42608:11827-11846 | MS.gene054186:intron | 25.0% |
| !!! | TTCATTGATGATGTTTTTGT+TGG | - | 42608:10655-10674 | MS.gene054186:intron | 25.0% |
| !!! | TTTTAGATTATTTCTCAGCT+TGG | + | 42608:15045-15064 | None:intergenic | 25.0% |
| !!! | TTTTATTGATTGAATGTAGG+TGG | - | 42608:11830-11849 | MS.gene054186:intron | 25.0% |
| AAAATACCTTCATGTCTATG+GGG | + | 42608:11326-11345 | None:intergenic | 30.0% | |
| AAACAAGGAGGTTAATTTAC+AGG | + | 42608:14953-14972 | None:intergenic | 30.0% | |
| AAACTATCAATTTCACTTGG+TGG | + | 42608:14912-14931 | None:intergenic | 30.0% | |
| AAACTGATACTTACACAACA+TGG | + | 42608:13851-13870 | None:intergenic | 30.0% | |
| AAATTTGAATGAACCCTTAC+TGG | + | 42608:12893-12912 | None:intergenic | 30.0% | |
| AAGGAAAAAATCAGAACACT+AGG | + | 42608:14055-14074 | None:intergenic | 30.0% | |
| ACATTGGAAACTTTATTCCT+AGG | + | 42608:12144-12163 | None:intergenic | 30.0% | |
| AGCATTAATAAAAGTGGACA+TGG | - | 42608:11915-11934 | MS.gene054186:intron | 30.0% | |
| AGGAAAAAATCAGAACACTA+GGG | + | 42608:14054-14073 | None:intergenic | 30.0% | |
| AGTTTCCAATGTTATTATCC+AGG | - | 42608:12152-12171 | MS.gene054186:intron | 30.0% | |
| CCTCTATAAATTAGATTCCA+AGG | - | 42608:11492-11511 | MS.gene054186:CDS | 30.0% | |
| CCTTGGAATCTAATTTATAG+AGG | + | 42608:11495-11514 | None:intergenic | 30.0% | |
| CTTATTATCACAAAGTTGGA+GGG | - | 42608:14495-14514 | MS.gene054186:intron | 30.0% | |
| GAAAATACCTTCATGTCTAT+GGG | + | 42608:11327-11346 | None:intergenic | 30.0% | |
| GAGAAACTATCAATTTCACT+TGG | + | 42608:14915-14934 | None:intergenic | 30.0% | |
| GCTTCATATTATCTTAAAGC+CGG | - | 42608:13921-13940 | MS.gene054186:intron | 30.0% | |
| GTGGAAAACAAATTTATGCA+TGG | + | 42608:14563-14582 | None:intergenic | 30.0% | |
| GTTTATAGTAATAGGCTTGA+AGG | - | 42608:10702-10721 | MS.gene054186:intron | 30.0% | |
| GTTTCCAATGTTATTATCCA+GGG | - | 42608:12153-12172 | MS.gene054186:intron | 30.0% | |
| TAACCAAAACACTTGATACA+TGG | + | 42608:14125-14144 | None:intergenic | 30.0% | |
| TAATGTCATTCCCATTATTG+AGG | - | 42608:13130-13149 | MS.gene054186:intron | 30.0% | |
| TCACATCTCATTTGATCAAA+TGG | - | 42608:14608-14627 | MS.gene054186:intron | 30.0% | |
| TCTTATTATCACAAAGTTGG+AGG | - | 42608:14494-14513 | MS.gene054186:intron | 30.0% | |
| TGAAAATACCTTCATGTCTA+TGG | + | 42608:11328-11347 | None:intergenic | 30.0% | |
| TGGAATCAAAATATATTCCC+AGG | + | 42608:12188-12207 | None:intergenic | 30.0% | |
| TTACTTGTGCATTATAGACT+TGG | - | 42608:14686-14705 | MS.gene054186:intron | 30.0% | |
| ! | AAAGTGTTTAACCGCATAAA+TGG | + | 42608:11773-11792 | None:intergenic | 30.0% |
| ! | ATGATGGTACCAGAATATTT+TGG | - | 42608:13265-13284 | MS.gene054186:intron | 30.0% |
| ! | CAAATGGGTTTATAGTTAGT+GGG | - | 42608:10809-10828 | MS.gene054186:intron | 30.0% |
| ! | GATTAGACGTATTGATCTAA+TGG | + | 42608:14585-14604 | None:intergenic | 30.0% |
| ! | GCTCAAAGCAATAATTTGTA+GGG | - | 42608:10831-10850 | MS.gene054186:intron | 30.0% |
| ! | TCAAATGGGTTTATAGTTAG+TGG | - | 42608:10808-10827 | MS.gene054186:intron | 30.0% |
| ! | TGAAATGGGTTTAGAGTAAT+AGG | - | 42608:10400-10419 | MS.gene054186:intron | 30.0% |
| ! | TGTTACTCTCTTTTTATTCC+CGG | - | 42608:11611-11630 | MS.gene054186:intron | 30.0% |
| ! | TTTCCATGTATCAAGTGTTT+TGG | - | 42608:14119-14138 | MS.gene054186:CDS | 30.0% |
| !! | AGCTTGATTTGTGTTGATAA+TGG | - | 42608:11069-11088 | MS.gene054186:intron | 30.0% |
| !! | GAAAGTTTGAGAAAAGTGTT+TGG | + | 42608:12122-12141 | None:intergenic | 30.0% |
| !!! | ATTTTAACTGAATGGTAAGG+GGG | - | 42608:11458-11477 | MS.gene054186:intron | 30.0% |
| !!! | CTTATCTACTTGTTTTTGCA+TGG | - | 42608:13356-13375 | MS.gene054186:intron | 30.0% |
| !!! | GAAGGTATTTTCATTGCTAA+GGG | - | 42608:11335-11354 | MS.gene054186:intron | 30.0% |
| !!! | TGAAGGTATTTTCATTGCTA+AGG | - | 42608:11334-11353 | MS.gene054186:intron | 30.0% |
| AAATTGAGAGAATCCATTCC+CGG | + | 42608:14794-14813 | None:intergenic | 35.0% | |
| AACACTAGGGAAAACTAAAC+AGG | + | 42608:14041-14060 | None:intergenic | 35.0% | |
| AACCGCATAAATGGAAAATG+TGG | + | 42608:11764-11783 | None:intergenic | 35.0% | |
| AATGAACTGTGTAACGTTTG+AGG | - | 42608:10459-10478 | MS.gene054186:intron | 35.0% | |
| ACTAACATTCTATACTTGGC+TGG | + | 42608:13167-13186 | None:intergenic | 35.0% | |
| ACTGTCACCAAAATATGAGT+TGG | - | 42608:13817-13836 | MS.gene054186:intron | 35.0% | |
| AGAAAAAGGATGCTGAATAG+CGG | - | 42608:15253-15272 | MS.gene054186:intron | 35.0% | |
| AGAGCACACAATTATTTGCA+TGG | + | 42608:12460-12479 | None:intergenic | 35.0% | |
| AGATTCCAAGGAATCTAAGA+TGG | - | 42608:11504-11523 | MS.gene054186:CDS | 35.0% | |
| AGGTTATATATTTCCGGGAA+TGG | - | 42608:14778-14797 | MS.gene054186:intron | 35.0% | |
| AGTGCATATGATGAGTTACT+CGG | - | 42608:13540-13559 | MS.gene054186:intron | 35.0% | |
| ATCATCCAAGAAGTCTTGAA+GGG | + | 42608:14194-14213 | None:intergenic | 35.0% | |
| ATGCACACAAAAATGTTCCA+AGG | - | 42608:11555-11574 | MS.gene054186:intron | 35.0% | |
| ATGTCTAGCATCCTCAATAA+TGG | + | 42608:13144-13163 | None:intergenic | 35.0% | |
| ATTATGCTAAACAACAGTGC+TGG | - | 42608:14276-14295 | MS.gene054186:CDS | 35.0% | |
| CAGAATGCCTAAGAAGAAAA+AGG | - | 42608:15239-15258 | MS.gene054186:intron | 35.0% | |
| CATAAAAGCCCAGCAAAAAT+TGG | + | 42608:10994-11013 | None:intergenic | 35.0% | |
| CATATTCTGTGTATGTAGAC+TGG | - | 42608:13038-13057 | MS.gene054186:intron | 35.0% | |
| CTGCATTGCCGTTATTTAAA+GGG | + | 42608:11704-11723 | None:intergenic | 35.0% | |
| CTTTCCCTGGATAATAACAT+TGG | + | 42608:12160-12179 | None:intergenic | 35.0% | |
| GATTTCCATCTTAGATTCCT+TGG | + | 42608:11512-11531 | None:intergenic | 35.0% | |
| GCCAACTAACATTCTATACT+TGG | + | 42608:13171-13190 | None:intergenic | 35.0% | |
| GCCAAGTATAGAATGTTAGT+TGG | - | 42608:13167-13186 | MS.gene054186:intron | 35.0% | |
| GGATATAACAAAATGACCTC+CGG | + | 42608:13943-13962 | None:intergenic | 35.0% | |
| GTATAGAATGTTAGTTGGCA+TGG | - | 42608:13172-13191 | MS.gene054186:intron | 35.0% | |
| GTCATTCAAGAAGTCTTGAA+GGG | + | 42608:13570-13589 | None:intergenic | 35.0% | |
| GTTACTAAGAATCTTGTTCC+TGG | - | 42608:11374-11393 | MS.gene054186:intron | 35.0% | |
| TCATATTATCTTAAAGCCGG+AGG | - | 42608:13924-13943 | MS.gene054186:intron | 35.0% | |
| TCATTCAAGAAGTCTTGAAG+GGG | + | 42608:13569-13588 | None:intergenic | 35.0% | |
| TCTGCATTGCCGTTATTTAA+AGG | + | 42608:11705-11724 | None:intergenic | 35.0% | |
| TGAAAAGAGAGTTTCTGTTC+AGG | - | 42608:11412-11431 | MS.gene054186:intron | 35.0% | |
| TGATATTGTTGGTCCAGTAA+GGG | - | 42608:12877-12896 | MS.gene054186:intron | 35.0% | |
| TGTCTAGCATCCTCAATAAT+GGG | + | 42608:13143-13162 | None:intergenic | 35.0% | |
| TGTGCATGTATACCAAACAT+GGG | + | 42608:11542-11561 | None:intergenic | 35.0% | |
| TTTGATGTGCATCAGTATCT+CGG | + | 42608:14223-14242 | None:intergenic | 35.0% | |
| ! | AAAGTCTGCAAGTCTGTTTT+TGG | - | 42608:12517-12536 | MS.gene054186:intron | 35.0% |
| ! | AGCAATAATTTGTAGGGATC+CGG | - | 42608:10837-10856 | MS.gene054186:intron | 35.0% |
| ! | ATCCGAATCCAATTTTTGCT+GGG | - | 42608:10983-11002 | MS.gene054186:intron | 35.0% |
| ! | CACTTTTCTCAAACTTTCCT+AGG | - | 42608:12124-12143 | MS.gene054186:intron | 35.0% |
| ! | GACTTGCTTATTAAGCACTT+TGG | - | 42608:14308-14327 | MS.gene054186:CDS | 35.0% |
| ! | GGCTCAAAGCAATAATTTGT+AGG | - | 42608:10830-10849 | MS.gene054186:intron | 35.0% |
| ! | GTCTCATCCAACTCATATTT+TGG | + | 42608:13827-13846 | None:intergenic | 35.0% |
| ! | GTTTAGAGTAATAGGCTTGA+AGG | - | 42608:10408-10427 | MS.gene054186:intron | 35.0% |
| ! | TAGACGTATTGATCTAATGG+TGG | + | 42608:14582-14601 | None:intergenic | 35.0% |
| ! | TCAGCATCCTTTTTCTTCTT+AGG | + | 42608:15249-15268 | None:intergenic | 35.0% |
| ! | TGCCACATTTTCCATTTATG+CGG | - | 42608:11759-11778 | MS.gene054186:intron | 35.0% |
| ! | TGGAGTTTTTGAATATGTGC+AGG | - | 42608:11089-11108 | MS.gene054186:intron | 35.0% |
| ! | TTTTATGTGCATCAGCATCT+CGG | + | 42608:13599-13618 | None:intergenic | 35.0% |
| ! | TTTTGGACGTGTACAAACTT+TGG | - | 42608:12534-12553 | MS.gene054186:intron | 35.0% |
| ! | TTTTTACATTGTGCAGAGTG+AGG | - | 42608:12611-12630 | MS.gene054186:CDS | 35.0% |
| !! | ACTGGGAATGTTTTATTCCT+TGG | + | 42608:11575-11594 | None:intergenic | 35.0% |
| !!! | AAAGTTGGAGGGCATTTTTT+AGG | - | 42608:14506-14525 | MS.gene054186:intron | 35.0% |
| !!! | CACAAGCTTGTTTTTACCAT+TGG | + | 42608:14648-14667 | None:intergenic | 35.0% |
| !!! | GACTTGCAGACTTTTTTTGA+CGG | + | 42608:12511-12530 | None:intergenic | 35.0% |
| !!! | TAGAGTTTTTTGATACCTCG+AGG | + | 42608:10196-10215 | None:intergenic | 35.0% |
| AAAATTGACCACACCTGATC+AGG | + | 42608:13227-13246 | None:intergenic | 40.0% | |
| ACCTGTTGTCTAAGTCTGAT+TGG | - | 42608:13010-13029 | MS.gene054186:intron | 40.0% | |
| ACGTTCAGGCCAAAATATTC+TGG | + | 42608:13277-13296 | None:intergenic | 40.0% | |
| AGCCCAGCAAAAATTGGATT+CGG | + | 42608:10988-11007 | None:intergenic | 40.0% | |
| ATATGTTGTCAACACCACCA+AGG | + | 42608:12698-12717 | None:intergenic | 40.0% | |
| ATCCAGGGAAAGTTAATCCT+GGG | - | 42608:12168-12187 | MS.gene054186:intron | 40.0% | |
| CACTCTTGAACCATTTGAGA+GGG | - | 42608:15191-15210 | MS.gene054186:intron | 40.0% | |
| CATCATCCAAGAAGTCTTGA+AGG | + | 42608:14195-14214 | None:intergenic | 40.0% | |
| CGTCATTCAAGAAGTCTTGA+AGG | + | 42608:13571-13590 | None:intergenic | 40.0% | |
| CTGATATTGTTGGTCCAGTA+AGG | - | 42608:12876-12895 | MS.gene054186:intron | 40.0% | |
| GACTGTCGAATCAATGCAAT+TGG | + | 42608:15100-15119 | None:intergenic | 40.0% | |
| GGCTTCTAAACAAACCTTGA+TGG | + | 42608:13964-13983 | None:intergenic | 40.0% | |
| GTGTGCATGTATACCAAACA+TGG | + | 42608:11543-11562 | None:intergenic | 40.0% | |
| TATCCAGGGAAAGTTAATCC+TGG | - | 42608:12167-12186 | MS.gene054186:intron | 40.0% | |
| TCACTCTTGAACCATTTGAG+AGG | - | 42608:15190-15209 | MS.gene054186:intron | 40.0% | |
| TCATCCAAGAAGTCTTGAAG+GGG | + | 42608:14193-14212 | None:intergenic | 40.0% | |
| TCATTGTAAACAGCTTCACC+AGG | + | 42608:11395-11414 | None:intergenic | 40.0% | |
| TCCAATCAGACTTAGACAAC+AGG | + | 42608:13014-13033 | None:intergenic | 40.0% | |
| TCTCACGTGTCTGATATTGT+TGG | - | 42608:12866-12885 | MS.gene054186:intron | 40.0% | |
| TGCTGCAGGCAAGAATATTA+GGG | - | 42608:13892-13911 | MS.gene054186:intron | 40.0% | |
| TTGATGTGCATCAGTATCTC+GGG | + | 42608:14222-14241 | None:intergenic | 40.0% | |
| TTTATGTGCATCAGCATCTC+GGG | + | 42608:13598-13617 | None:intergenic | 40.0% | |
| ! | CATCCGAATCCAATTTTTGC+TGG | - | 42608:10982-11001 | MS.gene054186:intron | 40.0% |
| ! | CTTTTTATTCCCGGCGTAAA+TGG | - | 42608:11620-11639 | MS.gene054186:intron | 40.0% |
| ! | TCTAATTTGATGAGTGCTGC+AGG | - | 42608:13878-13897 | MS.gene054186:intron | 40.0% |
| ! | TGGTTGTTAATTTGGAACCC+AGG | + | 42608:12102-12121 | None:intergenic | 40.0% |
| ! | TTTTGAATATGTGCAGGTCG+TGG | - | 42608:11095-11114 | MS.gene054186:intron | 40.0% |
| !! | TCAAGAGTGACTTGCTCAAA+TGG | + | 42608:15180-15199 | None:intergenic | 40.0% |
| !! | TTGGTGGTGTTGACAACATA+TGG | - | 42608:12697-12716 | MS.gene054186:intron | 40.0% |
| !!! | AGTTTTTTGATACCTCGAGG+AGG | + | 42608:10193-10212 | None:intergenic | 40.0% |
| ATCCACCAACAACACAAGCA+TGG | + | 42608:15218-15237 | None:intergenic | 45.0% | |
| ATTTCCGACTGCACACAAAC+CGG | + | 42608:10859-10878 | None:intergenic | 45.0% | |
| GATTCCCCTTCAAGACTTCT+TGG | - | 42608:13562-13581 | MS.gene054186:intron | 45.0% | |
| GGATGGGAATGATGTATTCC+TGG | - | 42608:11641-11660 | MS.gene054186:intron | 45.0% | |
| GGCGAGACTTATTGATCCAA+TGG | - | 42608:14629-14648 | MS.gene054186:intron | 45.0% | |
| GTGCTGCAGGCAAGAATATT+AGG | - | 42608:13891-13910 | MS.gene054186:intron | 45.0% | |
| TAACCAAGTCACGTCCACTT+CGG | + | 42608:13091-13110 | None:intergenic | 45.0% | |
| TACATTGTGCAGAGTGAGGA+TGG | - | 42608:12615-12634 | MS.gene054186:CDS | 45.0% | |
| TATTCCCGGCGTAAATGGAT+GGG | - | 42608:11625-11644 | MS.gene054186:intron | 45.0% | |
| TCATTCCCATCCATTTACGC+CGG | + | 42608:11633-11652 | None:intergenic | 45.0% | |
| TGGAATGAAAGGAGGAAGCA+AGG | - | 42608:11289-11308 | MS.gene054186:intron | 45.0% | |
| TGGGAATGATGTATTCCTGG+CGG | - | 42608:11644-11663 | MS.gene054186:intron | 45.0% | |
| TGTAGAGACGTGCATGTAGT+GGG | + | 42608:11728-11747 | None:intergenic | 45.0% | |
| TTATTCCCGGCGTAAATGGA+TGG | - | 42608:11624-11643 | MS.gene054186:intron | 45.0% | |
| TTCCCAGGATTAACTTTCCC+TGG | + | 42608:12173-12192 | None:intergenic | 45.0% | |
| ! | AATAACTTGTGTCAACCGCC+AGG | + | 42608:11662-11681 | None:intergenic | 45.0% |
| ! | CAGTGAGGTGAACAAGTTGA+AGG | - | 42608:15140-15159 | MS.gene054186:intron | 45.0% |
| ! | TGAGGTGAACAAGTTGAAGG+CGG | - | 42608:15143-15162 | MS.gene054186:intron | 45.0% |
| !! | ATTAGGGGGCGTTTGTTTCA+TGG | + | 42608:12208-12227 | None:intergenic | 45.0% |
| !! | TGGACGTGACTTGGTTAACA+TGG | - | 42608:13094-13113 | MS.gene054186:intron | 45.0% |
| !! | ATAAATGATTAAAATAAATA+AGG | + | 42608:12303-12322 | None:intergenic | 5.0% |
| AGGGACCATGCTTGTGTTGT+TGG | - | 42608:15210-15229 | MS.gene054186:intron | 50.0% | |
| AGGTACAGGACTTTAGCACC+AGG | + | 42608:12821-12840 | None:intergenic | 50.0% | |
| CAAGCATGGTCCCTCTCAAA+TGG | + | 42608:15204-15223 | None:intergenic | 50.0% | |
| CATTCCCATCCATTTACGCC+GGG | + | 42608:11632-11651 | None:intergenic | 50.0% | |
| CTGCCAACTTAGAGCGGAAA+GGG | + | 42608:12668-12687 | None:intergenic | 50.0% | |
| GGAAGAGGTGGAATGAAAGG+AGG | - | 42608:11281-11300 | MS.gene054186:intron | 50.0% | |
| GGTGCTAAAGTCCTGTACCT+AGG | - | 42608:12821-12840 | MS.gene054186:intron | 50.0% | |
| GTAGAATTCTCCCACCGAAG+TGG | - | 42608:13074-13093 | MS.gene054186:intron | 50.0% | |
| GTGTAGAGACGTGCATGTAG+TGG | + | 42608:11729-11748 | None:intergenic | 50.0% | |
| GTTGAGCCCCATAGACATGA+AGG | - | 42608:11317-11336 | MS.gene054186:intron | 50.0% | |
| TGAATATGTGCAGGTCGTGG+TGG | - | 42608:11098-11117 | MS.gene054186:intron | 50.0% | |
| TGATGTTGCTCAGCCTGATC+AGG | - | 42608:13211-13230 | MS.gene054186:intron | 50.0% | |
| TGTACCTAGGAGCTGCTTCA+GGG | - | 42608:12834-12853 | MS.gene054186:intron | 50.0% | |
| ! | GAACCCTTTCCGCTCTAAGT+TGG | - | 42608:12662-12681 | MS.gene054186:intron | 50.0% |
| ! | GACCATGCTTGTGTTGTTGG+TGG | - | 42608:15213-15232 | MS.gene054186:intron | 50.0% |
| ! | GATTTTAAGCCTCGTGGTGG+AGG | - | 42608:11197-11216 | MS.gene054186:intron | 50.0% |
| ! | GGAGATTTTAAGCCTCGTGG+TGG | - | 42608:11194-11213 | MS.gene054186:intron | 50.0% |
| ! | GGAGGAGATTTTAAGCCTCG+TGG | - | 42608:11191-11210 | MS.gene054186:intron | 50.0% |
| !! | AGAGGTTTTGGTGGAGGAAG+AGG | - | 42608:11170-11189 | MS.gene054186:intron | 50.0% |
| AAACCTCTACCTCCACCACG+AGG | + | 42608:11209-11228 | None:intergenic | 55.0% | |
| AAGTTGGCAGCTGCTGTCCT+TGG | - | 42608:12678-12697 | MS.gene054186:intron | 55.0% | |
| CAAGTCACGTCCACTTCGGT+GGG | + | 42608:13087-13106 | None:intergenic | 55.0% | |
| CAGCAGCTGCCAACTTAGAG+CGG | + | 42608:12674-12693 | None:intergenic | 55.0% | |
| CTCACTGCTGAACACTGCCT+CGG | + | 42608:15127-15146 | None:intergenic | 55.0% | |
| CTGAAGCAGCTCCTAGGTAC+AGG | + | 42608:12835-12854 | None:intergenic | 55.0% | |
| CTGTACCTAGGAGCTGCTTC+AGG | - | 42608:12833-12852 | MS.gene054186:intron | 55.0% | |
| GCTGCCAACTTAGAGCGGAA+AGG | + | 42608:12669-12688 | None:intergenic | 55.0% | |
| GGCGGAAGAGGTGGAATGAA+AGG | - | 42608:11278-11297 | MS.gene054186:intron | 55.0% | |
| TGTGCAGGTCGTGGTGGTTT+CGG | - | 42608:11104-11123 | MS.gene054186:intron | 55.0% | |
| TTGCTCAGCCTGATCAGGTG+TGG | - | 42608:13216-13235 | MS.gene054186:intron | 55.0% | |
| TTGTCCCTGAAGCAGCTCCT+AGG | + | 42608:12841-12860 | None:intergenic | 55.0% | |
| ! | GGATCCGGTTTGTGTGCAGT+CGG | - | 42608:10852-10871 | MS.gene054186:intron | 55.0% |
| !! | CGTGGTGGAGGTAGAGGTTT+TGG | - | 42608:11209-11228 | MS.gene054186:intron | 55.0% |
| !! | GGAGGTAGAGGTTTTGGTGG+AGG | - | 42608:11164-11183 | MS.gene054186:intron | 55.0% |
| !! | GGTGGAGGTAGAGGTTTTGG+AGG | - | 42608:11161-11180 | MS.gene054186:intron | 55.0% |
| !! | GGTGGAGGTAGAGGTTTTGG+TGG | - | 42608:11161-11180 | MS.gene054186:intron | 55.0% |
| !! | GGTTTTGGTGGAGGAAGAGG+AGG | - | 42608:11173-11192 | MS.gene054186:intron | 55.0% |
| !!! | AGAGGTTTTGGAGGAGGCAG+AGG | - | 42608:11221-11240 | MS.gene054186:intron | 55.0% |
| !!! | GGAGGTAGAGGTTTTGGAGG+AGG | - | 42608:11215-11234 | MS.gene054186:intron | 55.0% |
| !!! | GGTGGTGGAGGTAGAGGTTT+TGG | - | 42608:11158-11177 | MS.gene054186:intron | 55.0% |
| CCAAGTCACGTCCACTTCGG+TGG | + | 42608:13088-13107 | None:intergenic | 60.0% | |
| CCACCGAAGTGGACGTGACT+TGG | - | 42608:13085-13104 | MS.gene054186:intron | 60.0% | |
| CGAGGCAGTGTTCAGCAGTG+AGG | - | 42608:15125-15144 | MS.gene054186:intron | 60.0% | |
| CGTGGTGGTTTCGGAGGAAG+AGG | - | 42608:11113-11132 | MS.gene054186:intron | 60.0% | |
| GACAGAGGAGGAAGAGGTGG+TGG | - | 42608:11140-11159 | MS.gene054186:intron | 60.0% | |
| GGAAGAGGAGGTGACAGAGG+AGG | - | 42608:11128-11147 | MS.gene054186:intron | 60.0% | |
| GGAGGAAGAGGAGGTGACAG+AGG | - | 42608:11125-11144 | MS.gene054186:intron | 60.0% | |
| GGAGGTGACAGAGGAGGAAG+AGG | - | 42608:11134-11153 | MS.gene054186:intron | 60.0% | |
| GGTGACAGAGGAGGAAGAGG+TGG | - | 42608:11137-11156 | MS.gene054186:intron | 60.0% | |
| GGTGGTTTCGGAGGAAGAGG+AGG | - | 42608:11116-11135 | MS.gene054186:intron | 60.0% | |
| TGATTCGACAGTCCCTGCCG+AGG | - | 42608:15107-15126 | MS.gene054186:intron | 60.0% | |
| TGCTGAACACTGCCTCGGCA+GGG | + | 42608:15122-15141 | None:intergenic | 60.0% | |
| TTGGCAGCTGCTGTCCTTGG+TGG | - | 42608:12681-12700 | MS.gene054186:intron | 60.0% | |
| ! | AAGCCTCGTGGTGGAGGTAG+AGG | - | 42608:11203-11222 | MS.gene054186:intron | 60.0% |
| ! | AGAGGAGGAAGAGGTGGTGG+TGG | - | 42608:11143-11162 | MS.gene054186:intron | 60.0% |
| !! | AGAGGTGGTGGTGGAGGTAG+AGG | - | 42608:11152-11171 | MS.gene054186:intron | 60.0% |
| ACCACCCCTTCCTCCTCCAC+GGG | + | 42608:11249-11268 | None:intergenic | 65.0% | |
| AGGAGCCCGTGGAGGAGGAA+GGG | - | 42608:11241-11260 | MS.gene054186:intron | 65.0% | |
| CACCACCCCTTCCTCCTCCA+CGG | + | 42608:11250-11269 | None:intergenic | 65.0% | |
| CTGCTGAACACTGCCTCGGC+AGG | + | 42608:15123-15142 | None:intergenic | 65.0% | |
| GCAGGTCGTGGTGGTTTCGG+AGG | - | 42608:11107-11126 | MS.gene054186:intron | 65.0% | |
| !! | GGAGGAAGAGGTGGTGGTGG+AGG | - | 42608:11146-11165 | MS.gene054186:intron | 65.0% |
| CGTGGAGGAGGAAGGGGTGG+TGG | - | 42608:11248-11267 | MS.gene054186:intron | 70.0% | |
| GAGGAGCCCGTGGAGGAGGA+AGG | - | 42608:11240-11259 | MS.gene054186:intron | 70.0% | |
| GGAGCCCGTGGAGGAGGAAG+GGG | - | 42608:11242-11261 | MS.gene054186:intron | 70.0% | |
| ! | AGGGGTGGTGGTCGTGGTGG+CGG | - | 42608:11260-11279 | MS.gene054186:intron | 70.0% |
| ! | GGAAGGGGTGGTGGTCGTGG+TGG | - | 42608:11257-11276 | MS.gene054186:intron | 70.0% |
| ! | GGAGGAAGGGGTGGTGGTCG+TGG | - | 42608:11254-11273 | MS.gene054186:intron | 70.0% |
| !! | GGTCGTGGTGGCGGAAGAGG+TGG | - | 42608:11269-11288 | MS.gene054186:intron | 70.0% |
| !! | GGTGGTCGTGGTGGCGGAAG+AGG | - | 42608:11266-11285 | MS.gene054186:intron | 70.0% |
| GCCCGTGGAGGAGGAAGGGG+TGG | - | 42608:11245-11264 | MS.gene054186:intron | 75.0% | |
| GGAGGAGGCAGAGGAGCCCG+TGG | - | 42608:11230-11249 | MS.gene054186:intron | 75.0% | |
| GGAGGCAGAGGAGCCCGTGG+AGG | - | 42608:11233-11252 | MS.gene054186:intron | 75.0% | |
| GGCAGAGGAGCCCGTGGAGG+AGG | - | 42608:11236-11255 | MS.gene054186:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 42608 | gene | 10184 | 15272 | 10184 | ID=MS.gene054186 |
| 42608 | mRNA | 10184 | 15272 | 10184 | ID=MS.gene054186.t1;Parent=MS.gene054186 |
| 42608 | exon | 15257 | 15272 | 15257 | ID=MS.gene054186.t1.exon1;Parent=MS.gene054186.t1 |
| 42608 | CDS | 15257 | 15272 | 15257 | ID=cds.MS.gene054186.t1;Parent=MS.gene054186.t1 |
| 42608 | exon | 14023 | 14345 | 14023 | ID=MS.gene054186.t1.exon2;Parent=MS.gene054186.t1 |
| 42608 | CDS | 14023 | 14345 | 14023 | ID=cds.MS.gene054186.t1;Parent=MS.gene054186.t1 |
| 42608 | exon | 12734 | 12829 | 12734 | ID=MS.gene054186.t1.exon3;Parent=MS.gene054186.t1 |
| 42608 | CDS | 12734 | 12829 | 12734 | ID=cds.MS.gene054186.t1;Parent=MS.gene054186.t1 |
| 42608 | exon | 12564 | 12641 | 12564 | ID=MS.gene054186.t1.exon4;Parent=MS.gene054186.t1 |
| 42608 | CDS | 12564 | 12641 | 12564 | ID=cds.MS.gene054186.t1;Parent=MS.gene054186.t1 |
| 42608 | exon | 12224 | 12400 | 12224 | ID=MS.gene054186.t1.exon5;Parent=MS.gene054186.t1 |
| 42608 | CDS | 12224 | 12400 | 12224 | ID=cds.MS.gene054186.t1;Parent=MS.gene054186.t1 |
| 42608 | exon | 11488 | 11556 | 11488 | ID=MS.gene054186.t1.exon6;Parent=MS.gene054186.t1 |
| 42608 | CDS | 11488 | 11556 | 11488 | ID=cds.MS.gene054186.t1;Parent=MS.gene054186.t1 |
| 42608 | exon | 10184 | 10360 | 10184 | ID=MS.gene054186.t1.exon7;Parent=MS.gene054186.t1 |
| 42608 | CDS | 10184 | 10360 | 10184 | ID=cds.MS.gene054186.t1;Parent=MS.gene054186.t1 |
| Gene Sequence |
| Protein sequence |