AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene94360

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94360.t1 MTR_3g051240 94.483 435 22 1 1 435 1 433 0.0 855
MS.gene94360.t1 MTR_5g092360 79.384 422 85 1 16 435 18 439 0.0 721
MS.gene94360.t1 MTR_7g104330 59.179 414 166 3 19 430 29 441 0.0 533
MS.gene94360.t1 MTR_1g060360 59.719 427 168 4 6 430 9 433 0.0 533
MS.gene94360.t1 MTR_7g104360 59.466 412 162 4 10 418 13 422 2.45e-176 499
MS.gene94360.t1 MTR_4g115670 43.269 416 207 8 45 434 55 467 3.80e-104 317
MS.gene94360.t1 MTR_0188s0020 43.155 431 210 13 15 412 26 454 1.49e-102 313
MS.gene94360.t1 MTR_4g037105 42.651 415 204 11 31 412 35 448 5.02e-98 301
MS.gene94360.t1 MTR_6g013050 37.630 481 206 9 43 432 69 546 1.31e-96 301
MS.gene94360.t1 MTR_3g083810 39.083 458 186 8 45 412 71 525 6.15e-95 296
MS.gene94360.t1 MTR_7g056403 38.428 458 189 8 45 412 70 524 1.14e-94 295
MS.gene94360.t1 MTR_1g112630 41.014 434 220 12 13 412 19 450 1.79e-94 292
MS.gene94360.t1 MTR_3g083820 38.950 457 190 9 45 413 71 526 3.89e-93 291
MS.gene94360.t1 MTR_6g013050 37.788 434 178 8 43 387 69 499 3.95e-86 273
MS.gene94360.t1 MTR_1g052505 30.746 335 182 12 58 349 209 536 8.04e-35 137
MS.gene94360.t1 MTR_4g037670 28.084 381 210 10 58 381 231 604 1.29e-34 136
MS.gene94360.t1 MTR_3g074930 25.450 444 259 14 44 421 182 619 1.14e-24 107
MS.gene94360.t1 MTR_5g092450 60.000 80 12 1 308 387 8 67 2.58e-24 96.7
MS.gene94360.t1 MTR_3g074930 25.293 427 252 13 56 421 192 612 3.28e-24 105
MS.gene94360.t1 MTR_4g082930 26.506 415 227 13 45 384 144 555 7.26e-24 104
MS.gene94360.t1 MTR_5g092300 67.742 62 20 0 364 425 9 70 1.68e-22 91.3
MS.gene94360.t1 MTR_4g103520 25.068 367 226 9 101 421 253 616 4.47e-22 99.4
MS.gene94360.t1 MTR_4g103520 25.068 367 226 9 101 421 176 539 5.46e-22 99.0
MS.gene94360.t1 MTR_3g074970 24.578 415 221 12 58 421 143 516 5.83e-22 98.6
MS.gene94360.t1 MTR_5g045600 24.747 396 239 12 76 421 222 608 1.96e-21 97.4
MS.gene94360.t1 MTR_8g063080 26.016 369 220 12 101 421 238 601 6.32e-21 95.9
MS.gene94360.t1 MTR_4g082940 25.971 412 231 15 39 384 138 541 1.51e-20 94.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94360.t1 AT3G20500 73.086 431 116 0 5 435 7 437 0.0 689
MS.gene94360.t1 AT3G52820 60.599 401 154 3 17 415 20 418 0.0 519
MS.gene94360.t1 AT3G52810 55.378 437 186 3 1 429 1 436 5.29e-174 494
MS.gene94360.t1 AT3G52780 58.273 417 166 6 6 415 4 419 1.43e-173 493
MS.gene94360.t1 AT3G52780 56.886 334 136 6 6 332 4 336 3.50e-131 382
MS.gene94360.t1 AT5G34850 41.043 441 228 10 3 412 7 446 9.16e-102 311
MS.gene94360.t1 AT4G36350 40.583 446 228 13 2 412 5 448 9.45e-101 308
MS.gene94360.t1 AT1G56360 40.312 449 230 13 1 412 1 448 3.71e-98 302
MS.gene94360.t1 AT3G07130 40.618 421 177 5 65 413 97 516 1.68e-94 295
MS.gene94360.t1 AT2G27190 39.111 450 233 13 1 412 7 453 1.03e-90 283
MS.gene94360.t1 AT2G16430 39.503 443 233 13 3 412 12 452 1.95e-88 277
MS.gene94360.t1 AT2G18130 38.940 434 220 12 7 412 13 429 2.79e-88 275
MS.gene94360.t1 AT3G07130 37.665 454 177 6 65 413 97 549 1.20e-87 278
MS.gene94360.t1 AT4G13700 41.623 382 168 7 42 370 62 441 4.68e-86 270
MS.gene94360.t1 AT2G16430 42.025 326 165 8 111 412 7 332 5.75e-75 238
MS.gene94360.t1 AT2G32770 34.409 465 205 11 45 410 69 532 1.90e-70 232
MS.gene94360.t1 AT4G13700 39.296 341 152 7 42 329 62 400 1.11e-66 219
MS.gene94360.t1 AT3G46120 34.332 434 187 14 7 412 13 376 2.93e-64 212
MS.gene94360.t1 AT2G32770 35.422 367 161 6 95 386 62 427 1.74e-61 206
MS.gene94360.t1 AT2G32770 30.702 456 187 12 45 401 69 494 1.62e-53 187
MS.gene94360.t1 AT1G52940 37.719 228 124 9 45 255 15 241 2.64e-35 131
MS.gene94360.t1 AT5G50400 25.946 370 219 13 101 421 165 528 2.75e-21 96.7
MS.gene94360.t1 AT5G50400 25.946 370 219 13 101 421 237 600 3.11e-21 96.7
MS.gene94360.t1 AT2G03450 25.688 436 239 16 45 403 143 570 4.36e-21 96.3
MS.gene94360.t1 AT1G13900 29.630 270 148 8 172 403 305 570 6.66e-21 95.9
MS.gene94360.t1 AT4G24890 26.844 339 195 11 101 392 241 573 2.82e-20 94.0
MS.gene94360.t1 AT1G13750 25.648 347 209 10 101 401 239 582 7.27e-20 92.8

Find 104 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGACCACAGCAAAACTAAT+TGG 0.216017 3.2:+43732376 None:intergenic
AGAGCATATACCTTTGTTAA+AGG 0.247102 3.2:-43732161 MS.gene94360:CDS
AAGATACACCATACGGTAAT+AGG 0.307628 3.2:-43732484 MS.gene94360:CDS
GCACCTTCAGTTGTAGAATA+TGG 0.309081 3.2:-43732583 MS.gene94360:CDS
ACGTGTATATAATGGAAAAT+TGG 0.322130 3.2:-43730077 MS.gene94360:CDS
TGTACTCAGAACAATATAAA+TGG 0.325340 3.2:-43732006 MS.gene94360:CDS
AATCCAGGTACACATTTCTT+TGG 0.328498 3.2:-43732653 MS.gene94360:intron
TAAACTCAACACATGCCTTC+TGG 0.336522 3.2:-43729781 MS.gene94360:CDS
TGACAGAAACGTGTATATAA+TGG 0.346137 3.2:-43730085 MS.gene94360:intron
GAATTCCGTGAAGCAAGTTT+TGG 0.357920 3.2:-43729824 MS.gene94360:CDS
TTTGCTGTGGTCGGAGATCT+TGG 0.363118 3.2:-43732367 MS.gene94360:CDS
CGGTAAAATCTGATGATATC+TGG 0.374577 3.2:-43729730 MS.gene94360:CDS
TACGATGTTAACCTGATTCC+TGG 0.388167 3.2:-43732295 MS.gene94360:CDS
TTGATTTGGTCCAACCAGTT+TGG 0.390912 3.2:+43732344 None:intergenic
CCGGCTCATCATCGTCATTC+CGG 0.394998 3.2:+43729750 None:intergenic
CTTGATCCACTTTCCTCAAA+TGG 0.396116 3.2:+43732103 None:intergenic
CGGTAAAAGTAAACAGAATT+CGG 0.397092 3.2:+43732451 None:intergenic
ACGAAAGGTCGCCAGGAATC+AGG 0.398861 3.2:+43732284 None:intergenic
ACCCTCTTCTTATCCTCAAC+AGG 0.404020 3.2:-43733891 MS.gene94360:intron
CAGGTACACATTTCTTTGGC+TGG 0.410550 3.2:-43732649 MS.gene94360:CDS
TCGGCATACGAAAGGTCGCC+AGG 0.422584 3.2:+43732277 None:intergenic
CGGAATTCTGACCACTTTGG+CGG 0.431727 3.2:+43729839 None:intergenic
TAAACAGAATTCGGCTCTAA+AGG 0.439226 3.2:+43732460 None:intergenic
TTCCCTTGTGTTACCATCCA+TGG 0.444697 3.2:+43732193 None:intergenic
GTAGAAAATGTAACTGTAAG+AGG 0.446204 3.2:+43732516 None:intergenic
GATGTGATCTAATGTTGATT+TGG 0.450180 3.2:+43732330 None:intergenic
CATATACCTTTGTTAAAGGA+TGG 0.451005 3.2:-43732157 MS.gene94360:CDS
TGTCAAAGGTGGACAGGAAA+AGG 0.453174 3.2:-43730340 MS.gene94360:CDS
CATGACCAAAACTTGCTTCA+CGG 0.454586 3.2:+43729819 None:intergenic
GGTGCTCACATTATCATGCT+TGG 0.459315 3.2:-43732049 MS.gene94360:CDS
CGACCACAGCAAAACTAATT+GGG 0.462918 3.2:+43732377 None:intergenic
AGAATGCCATGGAAGATGTA+AGG 0.466799 3.2:+43733916 None:intergenic
CAGCATCGTTGGGACACGTT+TGG 0.476015 3.2:-43732247 MS.gene94360:CDS
GTAGAATATGGAACATTGCC+AGG 0.476108 3.2:-43732571 MS.gene94360:CDS
AATTCTGACCACTTTGGCGG+TGG 0.489479 3.2:+43729842 None:intergenic
TTAACCTCTTTAGACAGCTC+AGG 0.493926 3.2:-43729707 MS.gene94360:CDS
TTGTCATATTTCATGTCCCA+TGG 0.496286 3.2:-43730304 MS.gene94360:CDS
CAACACATGCCTTCTGGAGT+TGG 0.510276 3.2:-43729775 MS.gene94360:CDS
GTCGGAGATCTTGGCCAAAC+TGG 0.511189 3.2:-43732358 MS.gene94360:CDS
CGACTATATACAGCATCGTT+GGG 0.514220 3.2:-43732257 MS.gene94360:CDS
TGGATCTGTCAAAGGTGGAC+AGG 0.515700 3.2:-43730346 MS.gene94360:CDS
TCACGGAATTCTGACCACTT+TGG 0.520879 3.2:+43729836 None:intergenic
GGTGATGGAGGGAACAAAGA+AGG 0.525513 3.2:-43730025 MS.gene94360:CDS
GATTTATATCCTATAATTCG+AGG 0.527909 3.2:-43732135 MS.gene94360:CDS
CCGACTATATACAGCATCGT+TGG 0.531308 3.2:-43732258 MS.gene94360:CDS
TGGAGGGAACAAAGAAGGAT+TGG 0.532661 3.2:-43730020 MS.gene94360:CDS
AGCATAAAGCAATGGCTCCA+TGG 0.538411 3.2:+43730232 None:intergenic
AAACTAATTGGGAATTGAGC+TGG 0.540026 3.2:+43732388 None:intergenic
ACATCCTGAGCTGTCTAAAG+AGG 0.540208 3.2:+43729703 None:intergenic
GGTGCTGTTCATGTAACAAT+TGG 0.545245 3.2:-43730046 MS.gene94360:CDS
AGAACAATATAAATGGCTAA+AGG 0.548688 3.2:-43731999 MS.gene94360:intron
ATGCCTTCTGGAGTTGGCAC+CGG 0.559442 3.2:-43729769 MS.gene94360:CDS
GTATATAGTCGGCATACGAA+AGG 0.560724 3.2:+43732269 None:intergenic
GGTTAACATCGTATCTGCAT+TGG 0.564067 3.2:+43732305 None:intergenic
ATAAATCCATCCTTTAACAA+AGG 0.566465 3.2:+43732151 None:intergenic
GAGATCTTGGCCAAACTGGT+TGG 0.574404 3.2:-43732354 MS.gene94360:CDS
CTGTGTTACTATTATACCAT+GGG 0.577355 3.2:+43730288 None:intergenic
CCGGAATGACGATGATGAGC+CGG 0.578815 3.2:-43729750 MS.gene94360:CDS
GAGGTGGAAAATGCCATTTG+AGG 0.583883 3.2:-43732116 MS.gene94360:CDS
AAGTATGACTCGGTAGCTGA+AGG 0.586262 3.2:-43732547 MS.gene94360:CDS
AAAATGCCATTTGAGGAAAG+TGG 0.586799 3.2:-43732109 MS.gene94360:CDS
ACAAGCACGTGAGAATCACC+TGG 0.588099 3.2:-43732624 MS.gene94360:CDS
AATAGTAACACAGCTCATCA+AGG 0.589055 3.2:-43730278 MS.gene94360:CDS
TGCTAGTTATAGACCATGGA+TGG 0.590435 3.2:-43732206 MS.gene94360:CDS
GTTCCATATTCTACAACTGA+AGG 0.590950 3.2:+43732580 None:intergenic
CTAAAGGACCTATTACCGTA+TGG 0.592310 3.2:+43732476 None:intergenic
CAGGACCTTGTCCACCGCAT+CGG 0.593262 3.2:+43732431 None:intergenic
CCAACGATGCTGTATATAGT+CGG 0.594807 3.2:+43732258 None:intergenic
TTGAACTTGAAGTTACTGAC+AGG 0.597052 3.2:+43733975 None:intergenic
ATTCCGGTGCCAACTCCAGA+AGG 0.606814 3.2:+43729766 None:intergenic
GCTACCGAGTCATACTTCCC+TGG 0.609623 3.2:+43732553 None:intergenic
GTTCATGTAACAATTGGTGA+TGG 0.613051 3.2:-43730040 MS.gene94360:CDS
ATCGTTGGGACACGTTTGGT+AGG 0.618657 3.2:-43732243 MS.gene94360:CDS
AACACAGCTCATCAAGGTGA+AGG 0.620113 3.2:-43730272 MS.gene94360:CDS
ATGTAACAATTGGTGATGGA+GGG 0.620250 3.2:-43730036 MS.gene94360:CDS
TGAAATATGACAAGCAACCA+AGG 0.623138 3.2:+43730314 None:intergenic
GAAGAGGGTTCAGAATGCCA+TGG 0.623934 3.2:+43733905 None:intergenic
ACGCTAGCAGCATAAAGCAA+TGG 0.624653 3.2:+43730224 None:intergenic
CATGTAACAATTGGTGATGG+AGG 0.625889 3.2:-43730037 MS.gene94360:CDS
TGTCCACGCATATGAACGCT+CGG 0.625969 3.2:-43730180 MS.gene94360:intron
TGGACAGGAAAAGGACACCT+TGG 0.626466 3.2:-43730331 MS.gene94360:CDS
GCTGTGTTACTATTATACCA+TGG 0.628930 3.2:+43730287 None:intergenic
CTCAGGAAAGATACACCATA+CGG 0.635954 3.2:-43732491 MS.gene94360:CDS
ACAGCTCATCAAGGTGAAGG+TGG 0.636860 3.2:-43730269 MS.gene94360:CDS
TAGAATATGGAACATTGCCA+GGG 0.638513 3.2:-43732570 MS.gene94360:CDS
ATATAGATCCACCGCCAAAG+TGG 0.638937 3.2:-43729850 MS.gene94360:CDS
ACAGATGGATCTGTCAAAGG+TGG 0.639546 3.2:-43730351 MS.gene94360:intron
TTATATCCTATAATTCGAGG+TGG 0.646759 3.2:-43732132 MS.gene94360:CDS
TCTACAGATGGATCTGTCAA+AGG 0.647219 3.2:-43730354 MS.gene94360:intron
ACCTGTTGAGGATAAGAAGA+GGG 0.651423 3.2:+43733890 None:intergenic
AGATTTGTCATCAGTAACCC+AGG 0.657654 3.2:+43732606 None:intergenic
CATGGTCTATAACTAGCAAG+TGG 0.661007 3.2:+43732211 None:intergenic
AACCTGTTGAGGATAAGAAG+AGG 0.662586 3.2:+43733889 None:intergenic
CACTTGCTAGTTATAGACCA+TGG 0.666463 3.2:-43732210 MS.gene94360:CDS
CTACCGAGCGTTCATATGCG+TGG 0.675509 3.2:+43730177 None:intergenic
GACCATGGATGGTAACACAA+GGG 0.682670 3.2:-43732195 MS.gene94360:CDS
AGACCATGGATGGTAACACA+AGG 0.682851 3.2:-43732196 MS.gene94360:CDS
CTAATTGGGAATTGAGCTGG+TGG 0.690740 3.2:+43732391 None:intergenic
GTTACATGAACAGCACCACA+AGG 0.694159 3.2:+43730052 None:intergenic
TGTGTGAAGTGAACCTGTTG+AGG 0.695260 3.2:+43733878 None:intergenic
AATGGAAAATTGGATCCTTG+TGG 0.706470 3.2:-43730067 MS.gene94360:CDS
CAAGCACGTGAGAATCACCT+GGG 0.708786 3.2:-43732623 MS.gene94360:CDS
ATTGCCAGGGAAGTATGACT+CGG 0.709876 3.2:-43732557 MS.gene94360:CDS
TGGTGATATGATGAAAACCA+TGG 0.721681 3.2:-43730249 MS.gene94360:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTGTTCTTTTA+TGG - chr3.2:43730077-43730096 MS.gene94360:CDS 10.0%
!! ATCTTAATTTACACTTAAAA+AGG + chr3.2:43733762-43733781 None:intergenic 15.0%
!!! GTTTGTTTTAAATTTAATTC+TGG - chr3.2:43733178-43733197 MS.gene94360:intron 15.0%
!!! TCATTTTCTCAAATTATTAT+CGG + chr3.2:43731909-43731928 None:intergenic 15.0%
!!! TTTTTTGTAAATTTACTTAC+TGG - chr3.2:43733524-43733543 MS.gene94360:intron 15.0%
!! AAAGCAAAATATTGTTTAGT+AGG + chr3.2:43732320-43732339 None:intergenic 20.0%
!! AAATATGAGATCATAAATGA+AGG + chr3.2:43729818-43729837 None:intergenic 20.0%
!! AAATATTATGTGTGAACAAT+TGG + chr3.2:43732122-43732141 None:intergenic 20.0%
!! AATATGAGATCATAAATGAA+GGG + chr3.2:43729817-43729836 None:intergenic 20.0%
!! CTCTCAATAAATATGTATAA+GGG + chr3.2:43732967-43732986 None:intergenic 20.0%
!! GATCAATGTTACTATATTTA+AGG - chr3.2:43729883-43729902 MS.gene94360:intron 20.0%
!! GGGATGATAATTATTATAAA+CGG + chr3.2:43733273-43733292 None:intergenic 20.0%
!! TCTCTCAATAAATATGTATA+AGG + chr3.2:43732968-43732987 None:intergenic 20.0%
!!! ATATATCCCATCTTTTAAAA+AGG + chr3.2:43730455-43730474 None:intergenic 20.0%
!!! TATATCCCATCTTTTAAAAA+GGG + chr3.2:43730454-43730473 None:intergenic 20.0%
!!! TATTTGAAAACAGTTTTACT+TGG - chr3.2:43730922-43730941 MS.gene94360:intron 20.0%
! AAAAAAAGACTGTGTTGTAA+GGG - chr3.2:43733201-43733220 MS.gene94360:intron 25.0%
! AAAAGTTAGAACTTTCAGAA+AGG + chr3.2:43732594-43732613 None:intergenic 25.0%
! ACCAAATACTAAAACATCAA+TGG + chr3.2:43730413-43730432 None:intergenic 25.0%
! AGAACAATATAAATGGCTAA+AGG - chr3.2:43731666-43731685 MS.gene94360:intron 25.0%
! ATAAATCCATCCTTTAACAA+AGG + chr3.2:43731517-43731536 None:intergenic 25.0%
! ATACATATTTATTGAGAGAG+AGG - chr3.2:43732969-43732988 MS.gene94360:intron 25.0%
! ATACATTCATATGAAAACCT+AGG - chr3.2:43732677-43732696 MS.gene94360:intron 25.0%
! CAAAATATTGTTTAGTAGGA+TGG + chr3.2:43732316-43732335 None:intergenic 25.0%
! GATCAAGTAATAAAGCAAAA+GGG + chr3.2:43729867-43729886 None:intergenic 25.0%
! GATTTATATCCTATAATTCG+AGG - chr3.2:43731530-43731549 MS.gene94360:intron 25.0%
! GTTATAAATAACTGTGAATG+TGG - chr3.2:43732027-43732046 MS.gene94360:CDS 25.0%
! TATACTATTCTTACCATGTT+TGG - chr3.2:43733787-43733806 MS.gene94360:intron 25.0%
! TATTTATAACCTATGAAGCA+CGG + chr3.2:43732017-43732036 None:intergenic 25.0%
! TCAATAAATATGTATAAGGG+AGG + chr3.2:43732964-43732983 None:intergenic 25.0%
! TCAGATTCTTATATGAAAAG+TGG - chr3.2:43730989-43731008 MS.gene94360:intron 25.0%
! TCAGATTGTATATAAGTGAA+AGG - chr3.2:43732499-43732518 MS.gene94360:CDS 25.0%
! TCTAAATGTTTGTCATTCAT+TGG + chr3.2:43732728-43732747 None:intergenic 25.0%
! TGATCAAGTAATAAAGCAAA+AGG + chr3.2:43729868-43729887 None:intergenic 25.0%
! TGTACTCAGAACAATATAAA+TGG - chr3.2:43731659-43731678 MS.gene94360:intron 25.0%
! TTACACTTAAAAAGGAATAG+AGG + chr3.2:43733754-43733773 None:intergenic 25.0%
!! ACGTGTATATAATGGAAAAT+TGG - chr3.2:43733588-43733607 MS.gene94360:intron 25.0%
!! ATATTTTGCTTTAGCAGTTT+TGG - chr3.2:43732328-43732347 MS.gene94360:CDS 25.0%
!! TATTTTGCTTTAGCAGTTTT+GGG - chr3.2:43732329-43732348 MS.gene94360:CDS 25.0%
!! TGACATCTATTTGAAATGAT+TGG - chr3.2:43730588-43730607 MS.gene94360:intron 25.0%
!! TGATTTTCTTAAATCCATGA+TGG - chr3.2:43730132-43730151 MS.gene94360:intron 25.0%
!! TTTTCCGATTCTCATATTTA+GGG - chr3.2:43730526-43730545 MS.gene94360:intron 25.0%
!! TTTTGTTCTTTTATGGTTTC+TGG - chr3.2:43730084-43730103 MS.gene94360:intron 25.0%
!! TTTTTCCGATTCTCATATTT+AGG - chr3.2:43730525-43730544 MS.gene94360:intron 25.0%
!!! AACGTTTCATATTTTAAGCT+CGG + chr3.2:43730324-43730343 None:intergenic 25.0%
!!! AACTCTGAAGTTATTATAGT+AGG - chr3.2:43733002-43733021 MS.gene94360:intron 25.0%
!!! AACTTTTCTGTTTCTCATTA+GGG - chr3.2:43732607-43732626 MS.gene94360:CDS 25.0%
!!! AATAGTTCTGATTTATTGTG+AGG - chr3.2:43730167-43730186 MS.gene94360:intron 25.0%
!!! ATATCCCATCTTTTAAAAAG+GGG + chr3.2:43730453-43730472 None:intergenic 25.0%
!!! TAACTTTTCTGTTTCTCATT+AGG - chr3.2:43732606-43732625 MS.gene94360:CDS 25.0%
!!! TATTATTCTTTTGAAGTTGC+TGG - chr3.2:43731595-43731614 MS.gene94360:intron 25.0%
!!! TCCATTGATGTTTTAGTATT+TGG - chr3.2:43730409-43730428 MS.gene94360:intron 25.0%
!!! TCTGTTTCTACTAAACTTTT+AGG - chr3.2:43732245-43732264 MS.gene94360:CDS 25.0%
!!! TTGTTTTTGTCATGTGTTTT+TGG - chr3.2:43729931-43729950 MS.gene94360:intron 25.0%
!!! TTTTTTCACTTCTTGTTGTA+AGG + chr3.2:43732064-43732083 None:intergenic 25.0%
AAGTATTATAGACTTGTGTC+TGG - chr3.2:43730475-43730494 MS.gene94360:intron 30.0%
ACTAGAAACAGTTGCATTTA+TGG + chr3.2:43732156-43732175 None:intergenic 30.0%
AGAGCATATACCTTTGTTAA+AGG - chr3.2:43731504-43731523 MS.gene94360:intron 30.0%
AGATCACAACGAAGATATAA+AGG + chr3.2:43733294-43733313 None:intergenic 30.0%
AGATCAGACGACTTATATTT+AGG - chr3.2:43730276-43730295 MS.gene94360:CDS 30.0%
ATAAATGGCTAAAGGTTAGT+TGG - chr3.2:43731674-43731693 MS.gene94360:intron 30.0%
ATCTATATACCTACCAAACA+TGG + chr3.2:43733803-43733822 None:intergenic 30.0%
ATGAGAATCGGAAAAATTAG+AGG + chr3.2:43730521-43730540 None:intergenic 30.0%
ATGCATGCATATCTTTATGA+AGG + chr3.2:43732881-43732900 None:intergenic 30.0%
ATTGCACTAAATGATCTATG+AGG + chr3.2:43730058-43730077 None:intergenic 30.0%
ATTGGTTACAATGCAAGTAA+TGG + chr3.2:43732710-43732729 None:intergenic 30.0%
CAAAAGAAAAATGAACAGAC+GGG + chr3.2:43733057-43733076 None:intergenic 30.0%
CATATACCTTTGTTAAAGGA+TGG - chr3.2:43731508-43731527 MS.gene94360:intron 30.0%
CGGTAAAAGTAAACAGAATT+CGG + chr3.2:43731217-43731236 None:intergenic 30.0%
CTTATGAAGTTATGAATGTG+TGG - chr3.2:43730367-43730386 MS.gene94360:intron 30.0%
GAAAAAAAGACTGTGTTGTA+AGG - chr3.2:43733200-43733219 MS.gene94360:intron 30.0%
GATCACAACGAAGATATAAA+GGG + chr3.2:43733293-43733312 None:intergenic 30.0%
GCAAAAGAAAAATGAACAGA+CGG + chr3.2:43733058-43733077 None:intergenic 30.0%
GTAGAAAATGTAACTGTAAG+AGG + chr3.2:43731152-43731171 None:intergenic 30.0%
GTAGATAAACTCAAAGAAGT+CGG + chr3.2:43730778-43730797 None:intergenic 30.0%
TATTATGTGTGAACAATTGG+AGG + chr3.2:43732119-43732138 None:intergenic 30.0%
TCATCCCTAAATATGAGAAT+CGG + chr3.2:43730533-43730552 None:intergenic 30.0%
TCTCAAATTATTATCGGTGT+CGG + chr3.2:43731903-43731922 None:intergenic 30.0%
TGACAGAAACGTGTATATAA+TGG - chr3.2:43733580-43733599 MS.gene94360:intron 30.0%
TTACATGATATTCACCAAAC+TGG - chr3.2:43731817-43731836 MS.gene94360:intron 30.0%
TTATATCCTATAATTCGAGG+TGG - chr3.2:43731533-43731552 MS.gene94360:intron 30.0%
TTATATGAAAAGTGGAATCC+AGG - chr3.2:43730997-43731016 MS.gene94360:intron 30.0%
TTCATAGTTTATAGCCAGTT+TGG + chr3.2:43731834-43731853 None:intergenic 30.0%
TTGCACTTCATCATTATCAA+GGG + chr3.2:43732787-43732806 None:intergenic 30.0%
TTGGTTACAATGCAAGTAAT+GGG + chr3.2:43732709-43732728 None:intergenic 30.0%
TTGTTCTATGCTAACTACTA+TGG + chr3.2:43732475-43732494 None:intergenic 30.0%
TTTCCAATTAAAGTATGTCG+TGG - chr3.2:43731768-43731787 MS.gene94360:intron 30.0%
TTTGCACTTCATCATTATCA+AGG + chr3.2:43732788-43732807 None:intergenic 30.0%
! ATTCAACCTTTCTGTTTTCT+CGG - chr3.2:43733722-43733741 MS.gene94360:intron 30.0%
! CAGATATCATCAGATTTTAC+CGG + chr3.2:43733937-43733956 None:intergenic 30.0%
! CTGTGTTACTATTATACCAT+GGG + chr3.2:43733380-43733399 None:intergenic 30.0%
! GAATTAGTTGGAGATTAGTT+TGG - chr3.2:43732401-43732420 MS.gene94360:CDS 30.0%
! GATGTGATCTAATGTTGATT+TGG + chr3.2:43731338-43731357 None:intergenic 30.0%
! TCAACAAGAACTACTAGTTT+CGG + chr3.2:43733239-43733258 None:intergenic 30.0%
!! ATTGTCCCCTTTTTAAAAGA+TGG - chr3.2:43730445-43730464 MS.gene94360:intron 30.0%
!! TTGTCCCCTTTTTAAAAGAT+GGG - chr3.2:43730446-43730465 MS.gene94360:intron 30.0%
!!! GCTGTTTTTATAAACTATCG+TGG + chr3.2:43730894-43730913 None:intergenic 30.0%
!!! GGCTTCTATTTTTATGTATG+TGG + chr3.2:43732860-43732879 None:intergenic 30.0%
!!! TAGTACTAGTTAGTTTTCTG+AGG + chr3.2:43730668-43730687 None:intergenic 30.0%
!!! TTTAGCAGTTTTGGGATTAT+TGG - chr3.2:43732337-43732356 MS.gene94360:CDS 30.0%
!!! TTTGTCATGTGTTTTTGGTT+TGG - chr3.2:43729936-43729955 MS.gene94360:intron 30.0%
AAACTAATTGGGAATTGAGC+TGG + chr3.2:43731280-43731299 None:intergenic 35.0%
AAATGCCAGAAACATAAACG+TGG + chr3.2:43729975-43729994 None:intergenic 35.0%
AAGATACACCATACGGTAAT+AGG - chr3.2:43731181-43731200 MS.gene94360:intron 35.0%
AAGCAGCTTCACTGAAAAAT+TGG + chr3.2:43730195-43730214 None:intergenic 35.0%
AAGTACCACGTTTATGTTTC+TGG - chr3.2:43729967-43729986 MS.gene94360:intron 35.0%
AATAGTAACACAGCTCATCA+AGG - chr3.2:43733387-43733406 MS.gene94360:intron 35.0%
AATCCAGGTACACATTTCTT+TGG - chr3.2:43731012-43731031 MS.gene94360:intron 35.0%
AATGGAAAATTGGATCCTTG+TGG - chr3.2:43733598-43733617 MS.gene94360:intron 35.0%
ACATTCCAGACAAATCGAAT+GGG - chr3.2:43731721-43731740 MS.gene94360:intron 35.0%
AGACTCTTCAGTCTTTATGT+AGG - chr3.2:43730732-43730751 MS.gene94360:intron 35.0%
AGACTGTTTGAGAGAACATA+TGG - chr3.2:43730815-43730834 MS.gene94360:intron 35.0%
AGTCTAAAGACGAAAAGTGA+AGG + chr3.2:43730717-43730736 None:intergenic 35.0%
ATGATGAAGTGCAAAATCCT+TGG - chr3.2:43732793-43732812 MS.gene94360:intron 35.0%
CACACAACAACTGAATTAGT+TGG - chr3.2:43732389-43732408 MS.gene94360:CDS 35.0%
CATTGCATTTACATATGGCT+AGG - chr3.2:43732829-43732848 MS.gene94360:intron 35.0%
CGGTAAAATCTGATGATATC+TGG - chr3.2:43733935-43733954 MS.gene94360:CDS 35.0%
CTATAACACGAAACATCACA+AGG + chr3.2:43732216-43732235 None:intergenic 35.0%
CTATTCTTACCATGTTTGGT+AGG - chr3.2:43733791-43733810 MS.gene94360:intron 35.0%
CTTGTGATGTTTCGTGTTAT+AGG - chr3.2:43732214-43732233 MS.gene94360:CDS 35.0%
GAAAAACCTTACATCTTCCA+TGG - chr3.2:43729743-43729762 MS.gene94360:CDS 35.0%
GAGAGATTATTACTGTAGCA+AGG + chr3.2:43730112-43730131 None:intergenic 35.0%
GCATGCATTGCATTTACATA+TGG - chr3.2:43732824-43732843 MS.gene94360:intron 35.0%
GTTCATGTAACAATTGGTGA+TGG - chr3.2:43733625-43733644 MS.gene94360:intron 35.0%
GTTCCATATTCTACAACTGA+AGG + chr3.2:43731088-43731107 None:intergenic 35.0%
TACATTCCAGACAAATCGAA+TGG - chr3.2:43731720-43731739 MS.gene94360:intron 35.0%
TAGAATATGGAACATTGCCA+GGG - chr3.2:43731095-43731114 MS.gene94360:intron 35.0%
TAGCCACGACATACTTTAAT+TGG + chr3.2:43731774-43731793 None:intergenic 35.0%
TAGTATCCGAGAAAACAGAA+AGG + chr3.2:43733731-43733750 None:intergenic 35.0%
TCGGAAAAATTAGAGGTTGA+AGG + chr3.2:43730514-43730533 None:intergenic 35.0%
TGAAATATGACAAGCAACCA+AGG + chr3.2:43733354-43733373 None:intergenic 35.0%
TGGTGATATGATGAAAACCA+TGG - chr3.2:43733416-43733435 MS.gene94360:intron 35.0%
TGGTTACAATGCAAGTAATG+GGG + chr3.2:43732708-43732727 None:intergenic 35.0%
TTAGTATTTGGTTGAGTGTG+TGG - chr3.2:43730421-43730440 MS.gene94360:intron 35.0%
TTGAACTTGAAGTTACTGAC+AGG + chr3.2:43729693-43729712 None:intergenic 35.0%
TTGTCATATTTCATGTCCCA+TGG - chr3.2:43733361-43733380 MS.gene94360:intron 35.0%
! AAAATGCCATTTGAGGAAAG+TGG - chr3.2:43731556-43731575 MS.gene94360:intron 35.0%
! AAAGAAGCAACGGTTATTTC+TGG + chr3.2:43732761-43732780 None:intergenic 35.0%
! AGATGTAAGGTTTTTCTAGG+AGG + chr3.2:43729739-43729758 None:intergenic 35.0%
! AGTTACATTTTCTACAGCTC+AGG - chr3.2:43731157-43731176 MS.gene94360:intron 35.0%
! CATTTTCCACCTCGAATTAT+AGG + chr3.2:43731542-43731561 None:intergenic 35.0%
! CTTTCTAGTCTTCGAAATAG+CGG - chr3.2:43732290-43732309 MS.gene94360:CDS 35.0%
! GCTGTGTTACTATTATACCA+TGG + chr3.2:43733381-43733400 None:intergenic 35.0%
! GGAAGATGTAAGGTTTTTCT+AGG + chr3.2:43729742-43729761 None:intergenic 35.0%
! TAAACAGAATTCGGCTCTAA+AGG + chr3.2:43731208-43731227 None:intergenic 35.0%
!! AACATCAATGGACTAGACTA+CGG + chr3.2:43730401-43730420 None:intergenic 35.0%
!! AATTTTTCAGTGAAGCTGCT+TGG - chr3.2:43730194-43730213 MS.gene94360:CDS 35.0%
!! ATGTAACAATTGGTGATGGA+GGG - chr3.2:43733629-43733648 MS.gene94360:intron 35.0%
!! CTTAAATCCATGATGGATTG+TGG - chr3.2:43730139-43730158 MS.gene94360:intron 35.0%
!! TCTGTTTACTTTTACCGATG+CGG - chr3.2:43731220-43731239 MS.gene94360:intron 35.0%
!!! ATTCCCAATTAGTTTTGCTG+TGG - chr3.2:43731285-43731304 MS.gene94360:intron 35.0%
AAACTATCGTGGAGAGCTTA+TGG + chr3.2:43730883-43730902 None:intergenic 40.0%
AACAGTTGCATTTATGGCAG+TGG + chr3.2:43732150-43732169 None:intergenic 40.0%
AACCTGTTGAGGATAAGAAG+AGG + chr3.2:43729779-43729798 None:intergenic 40.0%
ACCTGTTGAGGATAAGAAGA+GGG + chr3.2:43729778-43729797 None:intergenic 40.0%
ACGAAACATCACAAGGTTCA+TGG + chr3.2:43732209-43732228 None:intergenic 40.0%
AGAATGCCATGGAAGATGTA+AGG + chr3.2:43729752-43729771 None:intergenic 40.0%
AGATTTGTCATCAGTAACCC+AGG + chr3.2:43731062-43731081 None:intergenic 40.0%
CATGGTCTATAACTAGCAAG+TGG + chr3.2:43731457-43731476 None:intergenic 40.0%
CCAACGATGCTGTATATAGT+CGG + chr3.2:43731410-43731429 None:intergenic 40.0%
CGACCACAGCAAAACTAATT+GGG + chr3.2:43731291-43731310 None:intergenic 40.0%
CGACTATATACAGCATCGTT+GGG - chr3.2:43731408-43731427 MS.gene94360:intron 40.0%
CTAAAGGACCTATTACCGTA+TGG + chr3.2:43731192-43731211 None:intergenic 40.0%
CTCAGGAAAGATACACCATA+CGG - chr3.2:43731174-43731193 MS.gene94360:intron 40.0%
CTTGATCCACTTTCCTCAAA+TGG + chr3.2:43731565-43731584 None:intergenic 40.0%
GAGCTTATGGAAATAAGCTG+AGG + chr3.2:43730870-43730889 None:intergenic 40.0%
GCACCTTCAGTTGTAGAATA+TGG - chr3.2:43731082-43731101 MS.gene94360:intron 40.0%
GGTTAACATCGTATCTGCAT+TGG + chr3.2:43731363-43731382 None:intergenic 40.0%
GGTTACAATGCAAGTAATGG+GGG + chr3.2:43732707-43732726 None:intergenic 40.0%
GTAGAATATGGAACATTGCC+AGG - chr3.2:43731094-43731113 MS.gene94360:intron 40.0%
GTATATAGTCGGCATACGAA+AGG + chr3.2:43731399-43731418 None:intergenic 40.0%
GTTCTCTCAAACAGTCTCAT+AGG + chr3.2:43730812-43730831 None:intergenic 40.0%
TAAACTCAACACATGCCTTC+TGG - chr3.2:43733884-43733903 MS.gene94360:intron 40.0%
TACGATGTTAACCTGATTCC+TGG - chr3.2:43731370-43731389 MS.gene94360:intron 40.0%
TCAAGGGAAGAAAGAAGCAA+CGG + chr3.2:43732771-43732790 None:intergenic 40.0%
TCTACAGATGGATCTGTCAA+AGG - chr3.2:43733311-43733330 MS.gene94360:intron 40.0%
TCTTCGTTGTGATCTACAGA+TGG - chr3.2:43733299-43733318 MS.gene94360:intron 40.0%
TGCTAGTTATAGACCATGGA+TGG - chr3.2:43731459-43731478 MS.gene94360:intron 40.0%
TTAACCTCTTTAGACAGCTC+AGG - chr3.2:43733958-43733977 MS.gene94360:CDS 40.0%
! CACTTGCTAGTTATAGACCA+TGG - chr3.2:43731455-43731474 MS.gene94360:intron 40.0%
! CATGACCAAAACTTGCTTCA+CGG + chr3.2:43733849-43733868 None:intergenic 40.0%
! GAATTCCGTGAAGCAAGTTT+TGG - chr3.2:43733841-43733860 MS.gene94360:intron 40.0%
!! ATTGGAGGCATCAAGAAAAC+AGG + chr3.2:43732104-43732123 None:intergenic 40.0%
!! CATGTAACAATTGGTGATGG+AGG - chr3.2:43733628-43733647 MS.gene94360:intron 40.0%
!! GGTGCTGTTCATGTAACAAT+TGG - chr3.2:43733619-43733638 MS.gene94360:intron 40.0%
!! TGTAAGGTTTTTCTAGGAGG+AGG + chr3.2:43729736-43729755 None:intergenic 40.0%
!! TTGATTTGGTCCAACCAGTT+TGG + chr3.2:43731324-43731343 None:intergenic 40.0%
!!! AGCGTCGATTTAGTTTTTGC+TGG - chr3.2:43733459-43733478 MS.gene94360:intron 40.0%
!!! CCAATTAGTTTTGCTGTGGT+CGG - chr3.2:43731289-43731308 MS.gene94360:intron 40.0%
AACACAGCTCATCAAGGTGA+AGG - chr3.2:43733393-43733412 MS.gene94360:intron 45.0%
AATGCATGCATCTCTCACCA+AGG + chr3.2:43732813-43732832 None:intergenic 45.0%
ACAGATGGATCTGTCAAAGG+TGG - chr3.2:43733314-43733333 MS.gene94360:intron 45.0%
ACATCCTGAGCTGTCTAAAG+AGG + chr3.2:43733965-43733984 None:intergenic 45.0%
ACCCTCTTCTTATCCTCAAC+AGG - chr3.2:43729774-43729793 MS.gene94360:CDS 45.0%
ACGCTAGCAGCATAAAGCAA+TGG + chr3.2:43733444-43733463 None:intergenic 45.0%
AGACCATGGATGGTAACACA+AGG - chr3.2:43731469-43731488 MS.gene94360:intron 45.0%
AGCATAAAGCAATGGCTCCA+TGG + chr3.2:43733436-43733455 None:intergenic 45.0%
ATAAGCTGAGGACAGCTTCT+AGG + chr3.2:43730858-43730877 None:intergenic 45.0%
ATATAGATCCACCGCCAAAG+TGG - chr3.2:43733815-43733834 MS.gene94360:intron 45.0%
CAGCCAAAGAAATGTGTACC+TGG + chr3.2:43731018-43731037 None:intergenic 45.0%
CAGGTACACATTTCTTTGGC+TGG - chr3.2:43731016-43731035 MS.gene94360:intron 45.0%
CCGACCACAGCAAAACTAAT+TGG + chr3.2:43731292-43731311 None:intergenic 45.0%
CCGACTATATACAGCATCGT+TGG - chr3.2:43731407-43731426 MS.gene94360:intron 45.0%
CTAATTGGGAATTGAGCTGG+TGG + chr3.2:43731277-43731296 None:intergenic 45.0%
CTGCAGTCAATCACAATTGC+TGG - chr3.2:43730249-43730268 MS.gene94360:CDS 45.0%
GACCATGGATGGTAACACAA+GGG - chr3.2:43731470-43731489 MS.gene94360:intron 45.0%
GATAATTCCGTAAAGCAGCG+CGG + chr3.2:43732643-43732662 None:intergenic 45.0%
GGTGCTCACATTATCATGCT+TGG - chr3.2:43731616-43731635 MS.gene94360:intron 45.0%
GTGAAGCTGCTTGGTTGATT+CGG - chr3.2:43730203-43730222 MS.gene94360:CDS 45.0%
GTTACATGAACAGCACCACA+AGG + chr3.2:43733616-43733635 None:intergenic 45.0%
TATGAACTCCGACAGAGACA+TGG - chr3.2:43731848-43731867 MS.gene94360:intron 45.0%
TCAAAGAAGTCGGTCCAAAC+AGG + chr3.2:43730768-43730787 None:intergenic 45.0%
TCACGGAATTCTGACCACTT+TGG + chr3.2:43733832-43733851 None:intergenic 45.0%
TGTCAAAGGTGGACAGGAAA+AGG - chr3.2:43733325-43733344 MS.gene94360:intron 45.0%
TGTGTGAAGTGAACCTGTTG+AGG + chr3.2:43729790-43729809 None:intergenic 45.0%
TTAGCGACCACAATCCATCA+TGG + chr3.2:43730149-43730168 None:intergenic 45.0%
TTCCCTTGTGTTACCATCCA+TGG + chr3.2:43731475-43731494 None:intergenic 45.0%
TTCCTCGATTAGGTGTATCC+CGG + chr3.2:43731991-43732010 None:intergenic 45.0%
! ATTGCCAGGGAAGTATGACT+CGG - chr3.2:43731108-43731127 MS.gene94360:intron 45.0%
! GAGGTGGAAAATGCCATTTG+AGG - chr3.2:43731549-43731568 MS.gene94360:intron 45.0%
! TAGAGCCCATTCGATTTGTC+TGG + chr3.2:43731729-43731748 None:intergenic 45.0%
! TGAAGCTGCTTGGTTGATTC+GGG - chr3.2:43730204-43730223 MS.gene94360:CDS 45.0%
!! AAGTATGACTCGGTAGCTGA+AGG - chr3.2:43731118-43731137 MS.gene94360:intron 45.0%
!! CGTGAAGCAAGTTTTGGTCA+TGG - chr3.2:43733847-43733866 MS.gene94360:intron 45.0%
!! GTTTACTTTTACCGATGCGG+TGG - chr3.2:43731223-43731242 MS.gene94360:intron 45.0%
!! TGCTTGGTTGATTCGGGAAA+TGG - chr3.2:43730210-43730229 MS.gene94360:CDS 45.0%
AATTCTGACCACTTTGGCGG+TGG + chr3.2:43733826-43733845 None:intergenic 50.0%
ACAAGCACGTGAGAATCACC+TGG - chr3.2:43731041-43731060 MS.gene94360:intron 50.0%
ACAGCTCATCAAGGTGAAGG+TGG - chr3.2:43733396-43733415 MS.gene94360:intron 50.0%
AGCACGGACATTCCTCGATT+AGG + chr3.2:43732001-43732020 None:intergenic 50.0%
ATCGTTGGGACACGTTTGGT+AGG - chr3.2:43731422-43731441 MS.gene94360:intron 50.0%
ATTGACTGCAGTGACTCTGC+AGG + chr3.2:43730240-43730259 None:intergenic 50.0%
CAAGCACGTGAGAATCACCT+GGG - chr3.2:43731042-43731061 MS.gene94360:intron 50.0%
CGGAATTCTGACCACTTTGG+CGG + chr3.2:43733829-43733848 None:intergenic 50.0%
GAAGAGGGTTCAGAATGCCA+TGG + chr3.2:43729763-43729782 None:intergenic 50.0%
GAGATCTTGGCCAAACTGGT+TGG - chr3.2:43731311-43731330 MS.gene94360:intron 50.0%
GAGGAATGTCCGTGCTTCAT+AGG - chr3.2:43732005-43732024 MS.gene94360:CDS 50.0%
GATTAGGTGTATCCCGGTGT+CGG + chr3.2:43731985-43732004 None:intergenic 50.0%
TAGGCGATCATGAGCCTGTT+TGG - chr3.2:43730751-43730770 MS.gene94360:intron 50.0%
TCCGACAGAGACATGGACAT+CGG - chr3.2:43731855-43731874 MS.gene94360:intron 50.0%
TGGACAGGAAAAGGACACCT+TGG - chr3.2:43733334-43733353 MS.gene94360:intron 50.0%
TGGATCTGTCAAAGGTGGAC+AGG - chr3.2:43733319-43733338 MS.gene94360:intron 50.0%
TGTCCACGCATATGAACGCT+CGG - chr3.2:43733485-43733504 MS.gene94360:intron 50.0%
TTGACTGCAGTGACTCTGCA+GGG + chr3.2:43730239-43730258 None:intergenic 50.0%
! CAAGTAATGGGGGTAGTCCT+AGG + chr3.2:43732697-43732716 None:intergenic 50.0%
! TTTGCTGTGGTCGGAGATCT+TGG - chr3.2:43731298-43731317 MS.gene94360:intron 50.0%
! TTTTACCGATGCGGTGGACA+AGG - chr3.2:43731229-43731248 MS.gene94360:intron 50.0%
!! CAACACATGCCTTCTGGAGT+TGG - chr3.2:43733890-43733909 MS.gene94360:intron 50.0%
!! TATTATCGGTGTCGGCGTGT+CGG + chr3.2:43731895-43731914 None:intergenic 50.0%
ACGAAAGGTCGCCAGGAATC+AGG + chr3.2:43731384-43731403 None:intergenic 55.0%
CACCGGGATACACCTAATCG+AGG - chr3.2:43731986-43732005 MS.gene94360:intron 55.0%
CACGCATATGAACGCTCGGT+AGG - chr3.2:43733489-43733508 MS.gene94360:intron 55.0%
CAGCATCGTTGGGACACGTT+TGG - chr3.2:43731418-43731437 MS.gene94360:intron 55.0%
CCCGATGTCCATGTCTCTGT+CGG + chr3.2:43731859-43731878 None:intergenic 55.0%
CCGACAGAGACATGGACATC+GGG - chr3.2:43731856-43731875 MS.gene94360:intron 55.0%
CCGGAATGACGATGATGAGC+CGG - chr3.2:43733915-43733934 MS.gene94360:CDS 55.0%
CCGGCTCATCATCGTCATTC+CGG + chr3.2:43733918-43733937 None:intergenic 55.0%
CTACCGAGCGTTCATATGCG+TGG + chr3.2:43733491-43733510 None:intergenic 55.0%
GCTACCGAGTCATACTTCCC+TGG + chr3.2:43731115-43731134 None:intergenic 55.0%
GTCGGAGATCTTGGCCAAAC+TGG - chr3.2:43731307-43731326 MS.gene94360:intron 55.0%
! ATTCCGGTGCCAACTCCAGA+AGG + chr3.2:43733902-43733921 None:intergenic 55.0%
!! ATGCCTTCTGGAGTTGGCAC+CGG - chr3.2:43733896-43733915 MS.gene94360:CDS 55.0%
!! GAGCTGGTGGTGTTTTGAGC+TGG + chr3.2:43731264-43731283 None:intergenic 55.0%
!! GGTGTTTTGAGCTGGAGCTC+AGG + chr3.2:43731256-43731275 None:intergenic 55.0%
ACTGATGCGTGTCCGACACC+GGG - chr3.2:43731970-43731989 MS.gene94360:intron 60.0%
CACTGATGCGTGTCCGACAC+CGG - chr3.2:43731969-43731988 MS.gene94360:intron 60.0%
CAGGACCTTGTCCACCGCAT+CGG + chr3.2:43731237-43731256 None:intergenic 60.0%
CATGGACATCGGGCACGACA+CGG - chr3.2:43731866-43731885 MS.gene94360:intron 60.0%
TCGGCATACGAAAGGTCGCC+AGG + chr3.2:43731391-43731410 None:intergenic 60.0%
! ACGCACTCCGCGCTGCTTTA+CGG - chr3.2:43732633-43732652 MS.gene94360:CDS 60.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 43729655 43734032 43729655 ID=MS.gene94360
chr3.2 mRNA 43729655 43734032 43729655 ID=MS.gene94360.t1;Parent=MS.gene94360
chr3.2 exon 43733892 43734032 43733892 ID=MS.gene94360.t1.exon1;Parent=MS.gene94360.t1
chr3.2 CDS 43733892 43734032 43733892 ID=cds.MS.gene94360.t1;Parent=MS.gene94360.t1
chr3.2 exon 43732000 43732668 43732000 ID=MS.gene94360.t1.exon2;Parent=MS.gene94360.t1
chr3.2 CDS 43732000 43732668 43732000 ID=cds.MS.gene94360.t1;Parent=MS.gene94360.t1
chr3.2 exon 43730181 43730369 43730181 ID=MS.gene94360.t1.exon3;Parent=MS.gene94360.t1
chr3.2 CDS 43730181 43730369 43730181 ID=cds.MS.gene94360.t1;Parent=MS.gene94360.t1
chr3.2 exon 43730013 43730101 43730013 ID=MS.gene94360.t1.exon4;Parent=MS.gene94360.t1
chr3.2 CDS 43730013 43730101 43730013 ID=cds.MS.gene94360.t1;Parent=MS.gene94360.t1
chr3.2 exon 43729655 43729874 43729655 ID=MS.gene94360.t1.exon5;Parent=MS.gene94360.t1
chr3.2 CDS 43729655 43729874 43729655 ID=cds.MS.gene94360.t1;Parent=MS.gene94360.t1
Gene Sequence

>MS.gene94360

ATGAAACTCAAACTGATTCTAACATTTTTACTGATCCTGTCAGTAACTTCAAGTTCAACTGCTGATGACTATGTCAGACCTCCTCCTAGAAAAACCTTACATCTTCCATGGCATTCTGAACCCTCTTCTTATCCTCAACAGGTTCACTTCACACACACACCCTTCATTTATGATCTCATATTTTACTGAAAAATAACTACTTTTGTATACCCTTTTGCTTTATTACTTGATCAATGTTACTATATTTAAGGAGTATCTTTTTGTAATTTTGTATTTTTGTTTTTGTCATGTGTTTTTGGTTTGGTTTTGTAAAAGTACCACGTTTATGTTTCTGGCATTTCTTTATTTAGTAAATCTTCACTTTAATTTCATGTTGCACATGTCAAAAACTTATTTTTGTCCTCATAGATCATTTAGTGCAATTTTTTTTTTTGTTCTTTTATGGTTTCTGGATCCTTGCTACAGTAATAATCTCTCTGATTTTCTTAAATCCATGATGGATTGTGGTCGCTAATAGTTCTGATTTATTGTGAGGAACCAATTTTTCAGTGAAGCTGCTTGGTTGATTCGGGAAATGGATTCCCTGCAGAGTCACTGCAGTCAATCACAATTGCTGGATGAAGATCAGACGACTTATATTTAGGATTGCTTTTAAAATCGAATTTACCGAGCTTAAAATATGAAACGTTCTATCGTCATCTAAAGATTTCGACTTATGAAGTTATGAATGTGTGGAATTGTAACCGTAGTCTAGTCCATTGATGTTTTAGTATTTGGTTGAGTGTGTGGAATTGTCCCCTTTTTAAAAGATGGGATATATAAGTATTATAGACTTGTGTCTGGTGATGAAATTCAACCTTCAACCTCTAATTTTTCCGATTCTCATATTTAGGGATGATAACGCTTGTGTTCATATTTAATCAGAATTCAGAATGACATCTATTTGAAATGATTGGTTAATAATTTGTTGTACTGCTTATTTTTTATAGCAGATTTGTTGTACTGCTTGTCCTCAGAAAACTAACTAGTACTATATTATTGTTTAAATTTAAACATCTTCCTTCACTTTTCGTCTTTAGACTCTTCAGTCTTTATGTAGGCGATCATGAGCCTGTTTGGACCGACTTCTTTGAGTTTATCTACTGACATAAACACCTATGAGACTGTTTGAGAGAACATATGGAAACAGCTTATGACGTGCCTAGAAGCTGTCCTCAGCTTATTTCCATAAGCTCTCCACGATAGTTTATAAAAACAGCTCATTGCTTATTTGAAAACAGTTTTACTTGGTATTAAGCATGTTATTTTATGACACTATAATTTCATATATTTATTCAGATTCTTATATGAAAAGTGGAATCCAGGTACACATTTCTTTGGCTGGAGACAAGCACGTGAGAATCACCTGGGTTACTGATGACAAATCTGCACCTTCAGTTGTAGAATATGGAACATTGCCAGGGAAGTATGACTCGGTAGCTGAAGGAGAGACAACCTCTTACAGTTACATTTTCTACAGCTCAGGAAAGATACACCATACGGTAATAGGTCCTTTAGAGCCGAATTCTGTTTACTTTTACCGATGCGGTGGACAAGGTCCTGAGCTCCAGCTCAAAACACCACCAGCTCAATTCCCAATTAGTTTTGCTGTGGTCGGAGATCTTGGCCAAACTGGTTGGACCAAATCAACATTAGATCACATCGACCAATGCAGATACGATGTTAACCTGATTCCTGGCGACCTTTCGTATGCCGACTATATACAGCATCGTTGGGACACGTTTGGTAGGCTTGTGCAGCCACTTGCTAGTTATAGACCATGGATGGTAACACAAGGGAATCATGAAGTAGAGCATATACCTTTGTTAAAGGATGGATTTATATCCTATAATTCGAGGTGGAAAATGCCATTTGAGGAAAGTGGATCAAGCTCGAATCTCTATTATTCTTTTGAAGTTGCTGGTGCTCACATTATCATGCTTGGTTCATATGATGATTATGACGTGTACTCAGAACAATATAAATGGCTAAAGGTTAGTTGGTTGCTCAATTGATCAAGTGTCATTACATTCCAGACAAATCGAATGGGCTCTATTTCAAGCTATAAGCGTTTTTTCCAATTAAAGTATGTCGTGGCTATATCTTGCATTTGAAACTCTAATTTACATGATATTCACCAAACTGGCTATAAACTATGAACTCCGACAGAGACATGGACATCGGGCACGACACGGACACCGACACGCCGACACCGATAATAATTTGAGAAAATGACATAATTTAGTGTAATCATCAGTGACAGTGTCGTGTCAGACACTGATGCGTGTCCGACACCGGGATACACCTAATCGAGGAATGTCCGTGCTTCATAGGTTATAAATAACTGTGAATGTGGTTATACTTATACCTTACAACAAGAAGTGAAAAAATATAAGAAGTTCATTATCCTGTTTTCTTGATGCCTCCAATTGTTCACACATAATATTTATTTTCCACTGCCATAAATGCAACTGTTTCTAGTTTTCTTCATTTGTCTTGTTATAAATTTTTTCCATGAACCTTGTGATGTTTCGTGTTATAGGTTACACTGTCTGTTTCTACTAAACTTTTAGGATTTATGTTTAGCTGTATATTGCTTTCTAGTCTTCGAAATAGCGGCCATCCTACTAAACAATATTTTGCTTTAGCAGTTTTGGGATTATTGGAGAATATTCAATCTCAAGATGATATGAAACACACAACAACTGAATTAGTTGGAGATTAGTTTGGTAGTTATAAGTTTGTTATGAAACTGTAAATAATACTATGCAGTAGAGTCCATAGTAGTTAGCATAGAACAACACATCAGATTGTATATAAGTGAAAGGTGTACACTAGTAAAGATCAGAACAGAATATTGATTAAAATGAATACACATGAGATTTCTTTCTCTTTTACCTTTCTGAAAGTTCTAACTTTTCTGTTTCTCATTAGGGATCACGCACTCCGCGCTGCTTTACGGAATTATCAACACAGCAATGACATACATTCATATGAAAACCTAGGACTACCCCCATTACTTGCATTGTAACCAATGAATGACAAACATTTAGAAGTTACGAAACCAGAAATAACCGTTGCTTCTTTCTTCCCTTGATAATGATGAAGTGCAAAATCCTTGGTGAGAGATGCATGCATTGCATTTACATATGGCTAGGATAAGCCACATACATAAAAATAGAAGCCTTCATAAAGATATGCATGCATTGCATTTAGAAGTCTTTAAATTCAGATATTAGAGACTTAAGCAATGTGAAAATGAAATATCCTCCCTTATACATATTTATTGAGAGAGAGGAACAGAGACAAACTCTGAAGTTATTATAGTAGGTTTTCTGCTAATATTGTTTTGACATTGTGCCCGTCTGTTCATTTTTCTTTTGCAATTTGTTGTATATATATTTTGTTGTGTTTTATTGTATAATTTTCTGTTAATTTAATTTGCTTGTTTCAGTTTTGTAAATTTTAGTTTCAATATATTCATGTTTGTTTTAAATTTAATTCTGGAAAAAAAGACTGTGTTGTAAGGGAAAATAGTCTGACCGAAACTAGTAGTTCTTGTTGAGTTTTAAAGTTCCGTTTATAATAATTATCATCCCTTTATATCTTCGTTGTGATCTACAGATGGATCTGTCAAAGGTGGACAGGAAAAGGACACCTTGGTTGCTTGTCATATTTCATGTCCCATGGTATAATAGTAACACAGCTCATCAAGGTGAAGGTGGTGATATGATGAAAACCATGGAGCCATTGCTTTATGCTGCTAGCGTCGATTTAGTTTTTGCTGGTCATGTCCACGCATATGAACGCTCGGTAGGCTTATAAGATATTTTTTTGTAAATTTACTTACTGGTCATCATCGAATCTTAAGCAATTCTTGTGTGATTGACAGAAACGTGTATATAATGGAAAATTGGATCCTTGTGGTGCTGTTCATGTAACAATTGGTGATGGAGGGAACAAAGAAGGATTGGCTCATAAGTAAGTTAATTGATTCTAACAGAAAATAATATTTGAAGTTGTTTTCAATTCAACCTTTCTGTTTTCTCGGATACTACCTCTATTCCTTTTTAAGTGTAAATTAAGATTCTCTTATACTATTCTTACCATGTTTGGTAGGTATATAGATCCACCGCCAAAGTGGTCAGAATTCCGTGAAGCAAGTTTTGGTCATGGTGAGCTAAAGATTGTAAACTCAACACATGCCTTCTGGAGTTGGCACCGGAATGACGATGATGAGCCGGTAAAATCTGATGATATCTGGTTAACCTCTTTAGACAGCTCAGGATGTGTTGATCAGAAGAGAACTGAACTTGAACATGCACTTATGACACCCTAA
Protein sequence

>MS.gene94360.t1

MKLKLILTFLLILSVTSSSTADDYVRPPPRKTLHLPWHSEPSSYPQQVHISLAGDKHVRITWVTDDKSAPSVVEYGTLPGKYDSVAEGETTSYSYIFYSSGKIHHTVIGPLEPNSVYFYRCGGQGPELQLKTPPAQFPISFAVVGDLGQTGWTKSTLDHIDQCRYDVNLIPGDLSYADYIQHRWDTFGRLVQPLASYRPWMVTQGNHEVEHIPLLKDGFISYNSRWKMPFEESGSSSNLYYSFEVAGAHIIMLGSYDDYDVYSEQYKWLKMDLSKVDRKRTPWLLVIFHVPWYNSNTAHQGEGGDMMKTMEPLLYAASVDLVFAGHVHAYERSKRVYNGKLDPCGAVHVTIGDGGNKEGLAHKYIDPPPKWSEFREASFGHGELKIVNSTHAFWSWHRNDDDEPVKSDDIWLTSLDSSGCVDQKRTELEHALMTP