Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008982.t1 | AET03315.1 | 97.9 | 338 | 7 | 0 | 1 | 338 | 9 | 346 | 7.70E-188 | 666.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008982.t1 | Q38827 | 63.5 | 329 | 113 | 3 | 8 | 336 | 3 | 324 | 8.5e-111 | 401.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008982.t1 | B7FIH2 | 97.9 | 338 | 7 | 0 | 1 | 338 | 1 | 338 | 5.6e-188 | 666.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene008982.t1 | TR | AUX/IAA |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene68989 | MS.gene008982 | PPI |
MS.gene015771 | MS.gene008982 | PPI |
MS.gene061505 | MS.gene008982 | PPI |
MS.gene04738 | MS.gene008982 | PPI |
MS.gene049100 | MS.gene008982 | PPI |
MS.gene008982 | MS.gene05894 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008982.t1 | MTR_8g067530 | 97.929 | 338 | 7 | 0 | 1 | 338 | 9 | 346 | 0.0 | 678 |
MS.gene008982.t1 | MTR_5g030710 | 71.633 | 349 | 64 | 7 | 1 | 338 | 1 | 325 | 4.06e-175 | 490 |
MS.gene008982.t1 | MTR_5g067350 | 56.069 | 346 | 130 | 9 | 3 | 338 | 4 | 337 | 5.71e-119 | 348 |
MS.gene008982.t1 | MTR_2g101500 | 49.085 | 328 | 122 | 10 | 39 | 338 | 6 | 316 | 5.06e-92 | 279 |
MS.gene008982.t1 | MTR_6g488150 | 54.286 | 280 | 86 | 7 | 59 | 338 | 7 | 244 | 3.84e-91 | 274 |
MS.gene008982.t1 | MTR_8g103030 | 49.502 | 301 | 105 | 9 | 56 | 338 | 12 | 283 | 2.07e-85 | 261 |
MS.gene008982.t1 | MTR_5g067350 | 52.518 | 278 | 113 | 9 | 3 | 270 | 4 | 272 | 2.98e-73 | 229 |
MS.gene008982.t1 | MTR_1g080860 | 44.128 | 281 | 96 | 7 | 67 | 338 | 15 | 243 | 4.24e-63 | 202 |
MS.gene008982.t1 | MTR_1g080860 | 44.086 | 279 | 95 | 7 | 67 | 336 | 15 | 241 | 3.52e-62 | 199 |
MS.gene008982.t1 | MTR_7g096090 | 60.000 | 155 | 60 | 1 | 184 | 338 | 88 | 240 | 2.21e-61 | 197 |
MS.gene008982.t1 | MTR_1g093240 | 62.092 | 153 | 54 | 2 | 188 | 338 | 76 | 226 | 2.78e-61 | 197 |
MS.gene008982.t1 | MTR_1g093240 | 62.252 | 151 | 53 | 2 | 188 | 336 | 76 | 224 | 5.34e-60 | 194 |
MS.gene008982.t1 | MTR_1g070520 | 61.392 | 158 | 54 | 3 | 186 | 338 | 80 | 235 | 5.63e-60 | 194 |
MS.gene008982.t1 | MTR_1g070830 | 40.502 | 279 | 85 | 10 | 58 | 336 | 4 | 201 | 7.05e-49 | 164 |
MS.gene008982.t1 | MTR_6g488150 | 47.642 | 212 | 69 | 7 | 59 | 270 | 7 | 176 | 1.20e-48 | 163 |
MS.gene008982.t1 | MTR_1g093240 | 60.305 | 131 | 48 | 2 | 188 | 316 | 76 | 204 | 1.44e-47 | 160 |
MS.gene008982.t1 | MTR_1g040675 | 39.259 | 270 | 76 | 7 | 67 | 336 | 1 | 182 | 3.74e-46 | 156 |
MS.gene008982.t1 | MTR_1g076270 | 46.591 | 176 | 65 | 5 | 164 | 336 | 29 | 178 | 2.12e-44 | 151 |
MS.gene008982.t1 | MTR_1g093350 | 46.591 | 176 | 65 | 5 | 164 | 336 | 29 | 178 | 2.12e-44 | 151 |
MS.gene008982.t1 | MTR_1g040675 | 36.400 | 250 | 71 | 7 | 67 | 316 | 1 | 162 | 1.00e-34 | 125 |
MS.gene008982.t1 | MTR_8g014520 | 38.071 | 197 | 100 | 5 | 155 | 332 | 67 | 260 | 9.65e-34 | 126 |
MS.gene008982.t1 | MTR_8g014520 | 38.071 | 197 | 100 | 5 | 155 | 332 | 67 | 260 | 1.10e-33 | 126 |
MS.gene008982.t1 | MTR_1g069495 | 40.449 | 178 | 73 | 4 | 194 | 338 | 81 | 258 | 1.09e-32 | 123 |
MS.gene008982.t1 | MTR_4g011880 | 50.694 | 144 | 42 | 4 | 193 | 336 | 52 | 166 | 1.53e-32 | 120 |
MS.gene008982.t1 | MTR_2g100780 | 39.362 | 188 | 91 | 5 | 167 | 332 | 68 | 254 | 2.01e-29 | 114 |
MS.gene008982.t1 | MTR_2g100780 | 39.362 | 188 | 91 | 5 | 167 | 332 | 68 | 254 | 2.39e-29 | 114 |
MS.gene008982.t1 | MTR_2g102490 | 46.341 | 123 | 54 | 3 | 212 | 331 | 70 | 183 | 2.31e-28 | 110 |
MS.gene008982.t1 | MTR_4g124300 | 33.987 | 153 | 72 | 5 | 182 | 331 | 56 | 182 | 2.14e-18 | 82.4 |
MS.gene008982.t1 | MTR_1g085750 | 39.091 | 110 | 52 | 2 | 227 | 336 | 82 | 176 | 1.46e-16 | 77.0 |
MS.gene008982.t1 | MTR_3g106850 | 28.662 | 157 | 78 | 4 | 185 | 332 | 78 | 209 | 3.05e-16 | 77.0 |
MS.gene008982.t1 | MTR_7g110790 | 40.777 | 103 | 45 | 3 | 228 | 329 | 68 | 155 | 2.13e-15 | 73.6 |
MS.gene008982.t1 | MTR_1g109510 | 30.769 | 143 | 78 | 4 | 188 | 329 | 46 | 168 | 7.34e-13 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008982.t1 | AT5G65670 | 64.955 | 331 | 109 | 3 | 8 | 338 | 3 | 326 | 1.88e-144 | 412 |
MS.gene008982.t1 | AT5G65670 | 64.848 | 330 | 109 | 3 | 8 | 337 | 3 | 325 | 9.61e-144 | 411 |
MS.gene008982.t1 | AT2G22670 | 65.385 | 312 | 85 | 7 | 33 | 338 | 32 | 326 | 2.34e-134 | 387 |
MS.gene008982.t1 | AT2G22670 | 65.385 | 312 | 85 | 7 | 33 | 338 | 15 | 309 | 2.39e-134 | 386 |
MS.gene008982.t1 | AT2G22670 | 65.385 | 312 | 85 | 7 | 33 | 338 | 15 | 309 | 2.39e-134 | 386 |
MS.gene008982.t1 | AT2G22670 | 65.484 | 310 | 84 | 7 | 33 | 336 | 15 | 307 | 2.33e-133 | 384 |
MS.gene008982.t1 | AT2G22670 | 65.484 | 310 | 84 | 7 | 33 | 336 | 15 | 307 | 2.33e-133 | 384 |
MS.gene008982.t1 | AT4G29080 | 47.975 | 321 | 117 | 8 | 39 | 340 | 8 | 297 | 2.06e-85 | 261 |
MS.gene008982.t1 | AT4G14550 | 43.636 | 275 | 95 | 7 | 67 | 338 | 1 | 218 | 1.50e-63 | 202 |
MS.gene008982.t1 | AT4G14550 | 42.599 | 277 | 103 | 7 | 67 | 342 | 1 | 222 | 1.59e-62 | 200 |
MS.gene008982.t1 | AT1G04250 | 43.590 | 273 | 93 | 8 | 67 | 338 | 7 | 219 | 2.34e-61 | 197 |
MS.gene008982.t1 | AT3G04730 | 41.463 | 287 | 91 | 7 | 67 | 338 | 2 | 226 | 3.14e-60 | 194 |
MS.gene008982.t1 | AT3G23050 | 41.135 | 282 | 101 | 8 | 67 | 338 | 6 | 232 | 2.06e-59 | 192 |
MS.gene008982.t1 | AT4G14550 | 41.270 | 252 | 88 | 7 | 67 | 315 | 1 | 195 | 1.08e-49 | 166 |
MS.gene008982.t1 | AT3G23050 | 38.846 | 260 | 94 | 8 | 67 | 316 | 6 | 210 | 2.07e-45 | 155 |
MS.gene008982.t1 | AT1G04240 | 53.691 | 149 | 49 | 4 | 188 | 336 | 57 | 185 | 3.15e-45 | 154 |
MS.gene008982.t1 | AT1G04240 | 53.691 | 149 | 49 | 4 | 188 | 336 | 157 | 285 | 1.39e-44 | 155 |
MS.gene008982.t1 | AT5G43700 | 50.641 | 156 | 53 | 5 | 181 | 336 | 50 | 181 | 2.55e-42 | 146 |
MS.gene008982.t1 | AT3G23030 | 49.664 | 149 | 44 | 2 | 188 | 336 | 53 | 170 | 2.13e-40 | 140 |
MS.gene008982.t1 | AT3G23030 | 49.664 | 149 | 44 | 2 | 188 | 336 | 140 | 257 | 8.78e-40 | 142 |
MS.gene008982.t1 | AT3G15540 | 46.667 | 165 | 63 | 5 | 173 | 336 | 48 | 188 | 1.55e-35 | 129 |
MS.gene008982.t1 | AT1G52830 | 44.966 | 149 | 55 | 4 | 188 | 336 | 63 | 184 | 3.06e-35 | 128 |
MS.gene008982.t1 | AT1G15580 | 46.853 | 143 | 44 | 3 | 190 | 331 | 48 | 159 | 1.86e-34 | 125 |
MS.gene008982.t1 | AT1G04550 | 43.103 | 174 | 68 | 5 | 187 | 338 | 61 | 225 | 7.96e-34 | 125 |
MS.gene008982.t1 | AT2G33310 | 43.820 | 178 | 66 | 6 | 183 | 336 | 63 | 230 | 1.09e-33 | 125 |
MS.gene008982.t1 | AT2G33310 | 43.820 | 178 | 66 | 6 | 183 | 336 | 63 | 230 | 1.09e-33 | 125 |
MS.gene008982.t1 | AT4G14560 | 49.306 | 144 | 44 | 3 | 190 | 333 | 50 | 164 | 1.94e-33 | 122 |
MS.gene008982.t1 | AT4G28640 | 41.040 | 173 | 74 | 4 | 188 | 340 | 81 | 245 | 4.43e-33 | 124 |
MS.gene008982.t1 | AT2G33310 | 40.704 | 199 | 80 | 7 | 162 | 336 | 47 | 231 | 6.61e-33 | 123 |
MS.gene008982.t1 | AT4G28640 | 42.262 | 168 | 69 | 4 | 188 | 335 | 81 | 240 | 8.84e-33 | 123 |
MS.gene008982.t1 | AT4G28640 | 36.715 | 207 | 95 | 6 | 188 | 366 | 81 | 279 | 6.62e-32 | 122 |
MS.gene008982.t1 | AT4G14550 | 37.255 | 204 | 74 | 6 | 67 | 269 | 1 | 151 | 6.66e-29 | 110 |
MS.gene008982.t1 | AT3G16500 | 38.690 | 168 | 83 | 4 | 181 | 332 | 89 | 252 | 2.44e-28 | 112 |
MS.gene008982.t1 | AT3G16500 | 38.690 | 168 | 83 | 4 | 181 | 332 | 89 | 252 | 2.97e-28 | 111 |
MS.gene008982.t1 | AT1G04100 | 37.725 | 167 | 75 | 4 | 197 | 336 | 95 | 259 | 3.30e-27 | 108 |
MS.gene008982.t1 | AT3G23050 | 34.742 | 213 | 76 | 7 | 67 | 269 | 6 | 165 | 6.81e-25 | 99.8 |
MS.gene008982.t1 | AT1G51950 | 39.241 | 158 | 71 | 4 | 196 | 332 | 97 | 250 | 6.99e-25 | 102 |
MS.gene008982.t1 | AT5G25890 | 37.931 | 145 | 68 | 2 | 194 | 338 | 47 | 169 | 7.80e-25 | 99.8 |
MS.gene008982.t1 | AT3G17600 | 37.324 | 142 | 64 | 5 | 188 | 329 | 38 | 154 | 3.12e-22 | 92.4 |
MS.gene008982.t1 | AT3G62100 | 39.423 | 104 | 48 | 2 | 226 | 329 | 80 | 168 | 6.64e-18 | 80.9 |
MS.gene008982.t1 | AT2G46990 | 36.792 | 106 | 52 | 1 | 226 | 331 | 82 | 172 | 1.59e-17 | 79.7 |
MS.gene008982.t1 | AT1G15050 | 36.190 | 105 | 51 | 1 | 230 | 334 | 62 | 150 | 1.22e-13 | 68.6 |
MS.gene008982.t1 | AT1G15050 | 36.190 | 105 | 51 | 1 | 230 | 334 | 94 | 182 | 2.59e-13 | 68.2 |
MS.gene008982.t1 | AT3G62100 | 38.462 | 91 | 41 | 2 | 226 | 316 | 80 | 155 | 7.91e-13 | 66.2 |
MS.gene008982.t1 | AT2G46990 | 35.165 | 91 | 44 | 1 | 226 | 316 | 82 | 157 | 4.45e-12 | 63.9 |
MS.gene008982.t1 | AT2G01200 | 32.000 | 125 | 66 | 2 | 210 | 334 | 83 | 188 | 3.28e-11 | 62.4 |
MS.gene008982.t1 | AT2G01200 | 32.000 | 125 | 66 | 2 | 210 | 334 | 83 | 188 | 3.28e-11 | 62.4 |
MS.gene008982.t1 | AT4G32280 | 30.693 | 101 | 50 | 2 | 229 | 329 | 118 | 198 | 3.57e-11 | 62.8 |
Find 92 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTCTGTCGCCTTCAAATTT+AGG | 0.166961 | 8.2:-35327536 | None:intergenic |
CTCTCTTGTACCACCTTCTT+TGG | 0.201829 | 8.2:-35328034 | None:intergenic |
TTGCTCTGCCCTTCCTCTTC+AGG | 0.226695 | 8.2:-35327360 | None:intergenic |
TCCCAGAAGACTGTTGTTTC+AGG | 0.240495 | 8.2:+35327687 | MS.gene008982:CDS |
AGCTAGATAGATGCTATTAT+TGG | 0.249002 | 8.2:+35330490 | MS.gene008982:CDS |
TGCCTGAAACAACAGTCTTC+TGG | 0.283080 | 8.2:-35327689 | None:intergenic |
CTGCTTTCGCCAAGACCTTC+TGG | 0.286943 | 8.2:+35327983 | MS.gene008982:CDS |
GAGTTAAGGCTCGGACTTCC+TGG | 0.311938 | 8.2:+35327555 | MS.gene008982:CDS |
AAAAGATCAAGATCCCTTTC+AGG | 0.324520 | 8.2:-35327588 | None:intergenic |
GCCTGAAACAACAGTCTTCT+GGG | 0.362984 | 8.2:-35327688 | None:intergenic |
GGCCTCCTATTAGATCATTT+AGG | 0.366841 | 8.2:+35328443 | MS.gene008982:CDS |
CAAGGTCAGACGACAGTTCC+TGG | 0.380173 | 8.2:-35328603 | None:intergenic |
TGGATGGTGCTCCTTATCTT+AGG | 0.386288 | 8.2:+35328551 | MS.gene008982:CDS |
CCAGTTCCATTTGCTGTACA+AGG | 0.388892 | 8.2:-35328058 | None:intergenic |
CCTTTGCTTCCTAGTAAAGA+TGG | 0.391162 | 8.2:+35327651 | MS.gene008982:CDS |
AGCTGGTGCACTGCCACTGA+TGG | 0.394017 | 8.2:-35328086 | None:intergenic |
TTCTTCTCTTTGCAGCTCCA+AGG | 0.402863 | 8.2:+35330443 | MS.gene008982:intron |
CTTTCAGGCGACTGAGATCC+AGG | 0.408190 | 8.2:-35327573 | None:intergenic |
TGTGGTTCGCATGGAGCTCC+AGG | 0.419336 | 8.2:+35328793 | MS.gene008982:CDS |
GGCATTTCTTTAACTGTAGT+AGG | 0.421367 | 8.2:-35328013 | None:intergenic |
GCGATGCAGGCAAAATATAC+TGG | 0.428432 | 8.2:+35327941 | MS.gene008982:intron |
CACGACAGAGCACAAGTTGT+TGG | 0.435279 | 8.2:+35328418 | MS.gene008982:intron |
CGGTTTGTCTGATTGCTCAT+CGG | 0.435647 | 8.2:+35327467 | MS.gene008982:CDS |
ATCTATCTAGCTCCTGCTCT+TGG | 0.438286 | 8.2:-35330479 | None:intergenic |
GCTAGATAGATGCTATTATT+GGG | 0.445855 | 8.2:+35330491 | MS.gene008982:CDS |
ATTTGAAGGCGACAGAGTTA+AGG | 0.448866 | 8.2:+35327541 | MS.gene008982:CDS |
GGTTCTGATGCAATTGGCTT+AGG | 0.454909 | 8.2:+35329613 | MS.gene008982:CDS |
ATTATGATTGAAAGTGCCTC+TGG | 0.454965 | 8.2:+35330321 | MS.gene008982:intron |
GAGAGCCCTTGTACAGCAAA+TGG | 0.456009 | 8.2:+35328052 | MS.gene008982:CDS |
ATGAAGGGTTCTGATGCAAT+TGG | 0.459012 | 8.2:+35329607 | MS.gene008982:CDS |
TCTTCTCTTTGCAGCTCCAA+GGG | 0.460018 | 8.2:+35330444 | MS.gene008982:intron |
AAAAGAGAACCTAAATTTGA+AGG | 0.461528 | 8.2:+35327527 | MS.gene008982:CDS |
GAGCAGATTCCATCTTTACT+AGG | 0.464937 | 8.2:-35327660 | None:intergenic |
CTTTGCAGCTCCAAGGGCCA+TGG | 0.469634 | 8.2:+35330450 | MS.gene008982:intron |
ATCTGCATCTCCACAATCCT+TGG | 0.473964 | 8.2:+35327398 | MS.gene008982:CDS |
GCTGGTGCACTGCCACTGAT+GGG | 0.475390 | 8.2:-35328085 | None:intergenic |
GTTGAGTGAGAGCAAATTGA+AGG | 0.479532 | 8.2:+35328825 | MS.gene008982:CDS |
TCACTCAACATTTCTCTCCC+TGG | 0.480300 | 8.2:-35328811 | None:intergenic |
TTCGTCATTGTTCTTTGAAG+TGG | 0.480383 | 8.2:-35328482 | None:intergenic |
GATGGTGACTGGATGCTTGT+TGG | 0.487706 | 8.2:+35328892 | MS.gene008982:CDS |
CTGGATCTCAGTCGCCTGAA+AGG | 0.489384 | 8.2:+35327574 | MS.gene008982:CDS |
TGGATCTCAGTCGCCTGAAA+GGG | 0.490957 | 8.2:+35327575 | MS.gene008982:CDS |
GTCATTGTTCTTTGAAGTGG+TGG | 0.492137 | 8.2:-35328479 | None:intergenic |
CCTTGTACAGCAAATGGAAC+TGG | 0.501475 | 8.2:+35328058 | MS.gene008982:CDS |
CATCTTTACTAGGAAGCAAA+GGG | 0.502801 | 8.2:-35327650 | None:intergenic |
TCCTCTTCAGGAAGCAGCAG+TGG | 0.503885 | 8.2:-35327348 | None:intergenic |
TTCCTAAATGATCTAATAGG+AGG | 0.509027 | 8.2:-35328445 | None:intergenic |
GCCACTGCTGCTTCCTGAAG+AGG | 0.511534 | 8.2:+35327347 | MS.gene008982:CDS |
AGATCAACCTTCCTAAGATA+AGG | 0.512174 | 8.2:-35328562 | None:intergenic |
TGGTGCTCCTTATCTTAGGA+AGG | 0.518238 | 8.2:+35328555 | MS.gene008982:CDS |
TGTTCTACTTACTTGGCAGC+TGG | 0.519150 | 8.2:-35328103 | None:intergenic |
CAAAAGACTGAAAATCATGA+AGG | 0.520025 | 8.2:+35329591 | MS.gene008982:CDS |
TTGAAAGAACGCAATTATCT+CGG | 0.521949 | 8.2:+35327447 | MS.gene008982:CDS |
GTTGTTTCAGGCAACAAAAG+AGG | 0.523282 | 8.2:+35327699 | MS.gene008982:CDS |
GGTTGAGCTCCAGAAGGTCT+TGG | 0.524873 | 8.2:-35327992 | None:intergenic |
ACAAATAGTGCAGCTGCACC+AGG | 0.530129 | 8.2:-35328517 | None:intergenic |
CCATCTTTACTAGGAAGCAA+AGG | 0.532897 | 8.2:-35327651 | None:intergenic |
CCTGCATGGTTCTGAATATG+TGG | 0.554207 | 8.2:+35328852 | MS.gene008982:CDS |
TTTGTGAAGGTTAGCATGGA+TGG | 0.555906 | 8.2:+35328535 | MS.gene008982:CDS |
AGTTAAAGAAATGCCAAAGA+AGG | 0.560187 | 8.2:+35328021 | MS.gene008982:CDS |
ACAGAGCACAAGTTGTTGGT+TGG | 0.560495 | 8.2:+35328422 | MS.gene008982:intron |
AAGAACAATGACGAAGTGGA+TGG | 0.561142 | 8.2:+35328490 | MS.gene008982:CDS |
TCAGGTCAATGTGGTTCGCA+TGG | 0.563755 | 8.2:+35328784 | MS.gene008982:intron |
CTGCTGCTTCCTGAAGAGGA+AGG | 0.570185 | 8.2:+35327351 | MS.gene008982:CDS |
CAGTTCCATTTGCTGTACAA+GGG | 0.574593 | 8.2:-35328057 | None:intergenic |
GACGAAGTGGATGGAAAACC+TGG | 0.579600 | 8.2:+35328499 | MS.gene008982:CDS |
TGCTGCTTCCTGAAGAGGAA+GGG | 0.582052 | 8.2:+35327352 | MS.gene008982:CDS |
AACAGCTGAACATCTTCTCA+AGG | 0.587195 | 8.2:-35328621 | None:intergenic |
ATGAAGATAAAGATGGTGAC+TGG | 0.592828 | 8.2:+35328881 | MS.gene008982:CDS |
AAGGCGACAGAGTTAAGGCT+CGG | 0.594838 | 8.2:+35327546 | MS.gene008982:CDS |
CCACATATTCAGAACCATGC+AGG | 0.602515 | 8.2:-35328852 | None:intergenic |
TAAAGAAATGCCAAAGAAGG+TGG | 0.603403 | 8.2:+35328024 | MS.gene008982:CDS |
TTCAAAGAACAATGACGAAG+TGG | 0.604897 | 8.2:+35328486 | MS.gene008982:CDS |
TGCAGCTGCACTATTTGTGA+AGG | 0.608355 | 8.2:+35328522 | MS.gene008982:CDS |
AAAAGACTGAAAATCATGAA+GGG | 0.608483 | 8.2:+35329592 | MS.gene008982:CDS |
TCTTCAGGAAGCAGCAGTGG+CGG | 0.617802 | 8.2:-35327345 | None:intergenic |
AGGAAACACTTCCAGTGTGT+CGG | 0.619955 | 8.2:-35327727 | None:intergenic |
AAATTGAAGGACTTCCTGCA+TGG | 0.622375 | 8.2:+35328838 | MS.gene008982:CDS |
GTCACTTATGAAGATAAAGA+TGG | 0.623567 | 8.2:+35328874 | MS.gene008982:CDS |
CTAGGAAGCAAAGGGAAGAG+CGG | 0.624666 | 8.2:-35327642 | None:intergenic |
GTAGTAGGTTGAGCTCCAGA+AGG | 0.631684 | 8.2:-35327998 | None:intergenic |
ACTATTTGTGAAGGTTAGCA+TGG | 0.640434 | 8.2:+35328531 | MS.gene008982:CDS |
GGAACTGGAGCTCCCATCAG+TGG | 0.641227 | 8.2:+35328073 | MS.gene008982:CDS |
GCTTGTTGGAGATGTACCAT+GGG | 0.652207 | 8.2:+35328906 | MS.gene008982:CDS |
GTGGTTCGCATGGAGCTCCA+GGG | 0.655439 | 8.2:+35328794 | MS.gene008982:CDS |
TGCTTGTTGGAGATGTACCA+TGG | 0.663037 | 8.2:+35328905 | MS.gene008982:CDS |
AGGGCAGAGCAACACCTCAA+CGG | 0.663741 | 8.2:+35327371 | MS.gene008982:CDS |
AAGAAACTATACAACATACC+AGG | 0.665573 | 8.2:+35328585 | MS.gene008982:CDS |
CACACTGGAAGTGTTTCCTG+AGG | 0.707617 | 8.2:+35327731 | MS.gene008982:CDS |
TGTACCTCATCAGGTCAATG+TGG | 0.712888 | 8.2:+35328775 | MS.gene008982:intron |
TCATTGCAGATGTAAACCAG+AGG | 0.734688 | 8.2:-35330337 | None:intergenic |
AGATGCAGATGCTACCGTTG+AGG | 0.757818 | 8.2:-35327385 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTTAAGTAACAAATTTAAA+AGG | - | chr8.2:35329245-35329264 | None:intergenic | 10.0% |
!! | GTAAAATATATAGAAATAAT+CGG | + | chr8.2:35328159-35328178 | MS.gene008982:intron | 10.0% |
!! | TGAATAAAAAAAAAATCAAA+TGG | + | chr8.2:35327880-35327899 | MS.gene008982:intron | 10.0% |
!!! | TATTATTTTGATATAGTTTA+GGG | + | chr8.2:35328288-35328307 | MS.gene008982:intron | 10.0% |
!!! | TTATTATTTTGATATAGTTT+AGG | + | chr8.2:35328287-35328306 | MS.gene008982:intron | 10.0% |
!!! | TTTAAATTTGTTACTTAAAT+AGG | + | chr8.2:35329245-35329264 | MS.gene008982:intron | 10.0% |
!!! | TTTTTTTATTCAAAATTGAT+AGG | - | chr8.2:35327872-35327891 | None:intergenic | 10.0% |
!! | AATATATTAACTCTAGTAAA+AGG | - | chr8.2:35327775-35327794 | None:intergenic | 15.0% |
!! | ATATATTAACACATTTCAAT+AGG | - | chr8.2:35329400-35329419 | None:intergenic | 15.0% |
!! | TGTATATTAAATTGTAATTG+AGG | + | chr8.2:35329096-35329115 | MS.gene008982:intron | 15.0% |
!!! | TACTAGAGTTAATATATTTT+TGG | + | chr8.2:35327777-35327796 | MS.gene008982:intron | 15.0% |
!!! | TGGACTATTTAATTTAATAA+GGG | + | chr8.2:35330100-35330119 | MS.gene008982:intron | 15.0% |
!! | AAATAACACTTATAATGAGA+CGG | - | chr8.2:35329948-35329967 | None:intergenic | 20.0% |
!! | AAATAGGAACATAAAAGTTT+AGG | + | chr8.2:35329261-35329280 | MS.gene008982:intron | 20.0% |
!! | ACTTAAACATTAAACATATC+AGG | - | chr8.2:35329652-35329671 | None:intergenic | 20.0% |
!! | ATAAAAGTTTAGGTATGTTA+TGG | + | chr8.2:35329271-35329290 | MS.gene008982:intron | 20.0% |
!!! | AAATTTCATACATGTTTTGA+AGG | + | chr8.2:35329763-35329782 | MS.gene008982:intron | 20.0% |
!!! | CTCATTATAAGTGTTATTTT+AGG | + | chr8.2:35329949-35329968 | MS.gene008982:intron | 20.0% |
!!! | GTGGACTATTTAATTTAATA+AGG | + | chr8.2:35330099-35330118 | MS.gene008982:intron | 20.0% |
!!! | TAATTTAATAAGGGTATTGT+TGG | + | chr8.2:35330109-35330128 | MS.gene008982:intron | 20.0% |
!!! | TTTTTCCTAAATGATCTAAT+AGG | - | chr8.2:35328451-35328470 | None:intergenic | 20.0% |
! | AAAAGACTGAAAATCATGAA+GGG | + | chr8.2:35329592-35329611 | MS.gene008982:CDS | 25.0% |
! | AAAAGAGAACCTAAATTTGA+AGG | + | chr8.2:35327527-35327546 | MS.gene008982:CDS | 25.0% |
! | AAGTAGAACATTCTACATTA+AGG | + | chr8.2:35328116-35328135 | MS.gene008982:intron | 25.0% |
! | ACTAGTGTTTAAGAAACTAT+AGG | + | chr8.2:35329839-35329858 | MS.gene008982:intron | 25.0% |
! | ATATAGTTTAGGGACTAAAT+AGG | + | chr8.2:35328298-35328317 | MS.gene008982:intron | 25.0% |
! | ATTTGCAATTCATTCTTGTA+AGG | - | chr8.2:35329136-35329155 | None:intergenic | 25.0% |
! | CAAAAAACAAAGATACTACA+TGG | - | chr8.2:35329167-35329186 | None:intergenic | 25.0% |
! | GAAATTGAAAGTAGTAGTAA+AGG | + | chr8.2:35330067-35330086 | MS.gene008982:intron | 25.0% |
! | GTTTACACAAGCATAATATA+TGG | + | chr8.2:35329730-35329749 | MS.gene008982:intron | 25.0% |
! | GTTTACTCAATACCTTAAAA+GGG | + | chr8.2:35328354-35328373 | MS.gene008982:intron | 25.0% |
! | TACCACAAGAAAACTATTAT+TGG | + | chr8.2:35330395-35330414 | MS.gene008982:intron | 25.0% |
! | TCATTCTTGTAAGGAATTTA+TGG | - | chr8.2:35329127-35329146 | None:intergenic | 25.0% |
! | TTCAATTAGGAAGGTTATTT+GGG | - | chr8.2:35329194-35329213 | None:intergenic | 25.0% |
! | TTTCAATTAGGAAGGTTATT+TGG | - | chr8.2:35329195-35329214 | None:intergenic | 25.0% |
! | TTTGAATATAATGATGCAGT+TGG | + | chr8.2:35330261-35330280 | MS.gene008982:intron | 25.0% |
!! | ACATCAAAAAATCCCTTTTA+AGG | - | chr8.2:35328369-35328388 | None:intergenic | 25.0% |
!! | AGATGGATTTCATATAGTTT+AGG | + | chr8.2:35328227-35328246 | MS.gene008982:intron | 25.0% |
!! | GATGGATTTCATATAGTTTA+GGG | + | chr8.2:35328228-35328247 | MS.gene008982:intron | 25.0% |
!! | TACCAATAATAGTTTTCTTG+TGG | - | chr8.2:35330400-35330419 | None:intergenic | 25.0% |
!! | TTACTCATGTCTTTTCAATT+AGG | - | chr8.2:35329207-35329226 | None:intergenic | 25.0% |
!!! | AAAGTTTAACTTTTTACCTC+AGG | - | chr8.2:35327750-35327769 | None:intergenic | 25.0% |
!!! | ATATATCCATTTTTGTACCT+AGG | + | chr8.2:35329414-35329433 | MS.gene008982:intron | 25.0% |
!!! | CATGTAGTATCTTTGTTTTT+TGG | + | chr8.2:35329165-35329184 | MS.gene008982:intron | 25.0% |
!!! | CTAATCAATATGGGTTTTTT+AGG | - | chr8.2:35330040-35330059 | None:intergenic | 25.0% |
!!! | TGCTTTCTAAAATGTATCTT+TGG | + | chr8.2:35328733-35328752 | MS.gene008982:intron | 25.0% |
!!! | TTTTTTTTTCTCTTCGTTTG+TGG | - | chr8.2:35330240-35330259 | None:intergenic | 25.0% |
AAGAAACTATACAACATACC+AGG | + | chr8.2:35328585-35328604 | MS.gene008982:CDS | 30.0% | |
ACTCACAAAACACAACAATT+TGG | - | chr8.2:35329810-35329829 | None:intergenic | 30.0% | |
AGCTAGATAGATGCTATTAT+TGG | + | chr8.2:35330490-35330509 | MS.gene008982:CDS | 30.0% | |
AGTTAAAGAAATGCCAAAGA+AGG | + | chr8.2:35328021-35328040 | MS.gene008982:CDS | 30.0% | |
ATATATAAACTGTCCCCAAA+AGG | - | chr8.2:35329076-35329095 | None:intergenic | 30.0% | |
ATATATTGACAAGAGCTACT+AGG | + | chr8.2:35328196-35328215 | MS.gene008982:intron | 30.0% | |
ATCATTTAGGAAAAACTCAC+TGG | + | chr8.2:35328456-35328475 | MS.gene008982:CDS | 30.0% | |
CAAAAGACTGAAAATCATGA+AGG | + | chr8.2:35329591-35329610 | MS.gene008982:CDS | 30.0% | |
GACACTTATAATGAGATAGA+GGG | + | chr8.2:35330192-35330211 | MS.gene008982:intron | 30.0% | |
GATTTAAAAACTTACTCCCA+TGG | - | chr8.2:35328925-35328944 | None:intergenic | 30.0% | |
GCTAGATAGATGCTATTATT+GGG | + | chr8.2:35330491-35330510 | MS.gene008982:CDS | 30.0% | |
GGTTTACTCAATACCTTAAA+AGG | + | chr8.2:35328353-35328372 | MS.gene008982:intron | 30.0% | |
GTCACTTATGAAGATAAAGA+TGG | + | chr8.2:35328874-35328893 | MS.gene008982:CDS | 30.0% | |
TATATTGACAAGAGCTACTA+GGG | + | chr8.2:35328197-35328216 | MS.gene008982:intron | 30.0% | |
TCAACCACTCTAATCAATAT+GGG | - | chr8.2:35330049-35330068 | None:intergenic | 30.0% | |
TCAATTAGGAAGGTTATTTG+GGG | - | chr8.2:35329193-35329212 | None:intergenic | 30.0% | |
TGACACTTATAATGAGATAG+AGG | + | chr8.2:35330191-35330210 | MS.gene008982:intron | 30.0% | |
TGCAACTTGTATGTAACTTA+AGG | + | chr8.2:35330296-35330315 | MS.gene008982:intron | 30.0% | |
TGTAGAATGTTCTACTTACT+TGG | - | chr8.2:35328113-35328132 | None:intergenic | 30.0% | |
TTCAACCACTCTAATCAATA+TGG | - | chr8.2:35330050-35330069 | None:intergenic | 30.0% | |
TTCCTAAATGATCTAATAGG+AGG | - | chr8.2:35328448-35328467 | None:intergenic | 30.0% | |
TTCTTCAATGACTAAAGTGA+TGG | + | chr8.2:35328332-35328351 | MS.gene008982:intron | 30.0% | |
TTGAAAGAACGCAATTATCT+CGG | + | chr8.2:35327447-35327466 | MS.gene008982:CDS | 30.0% | |
! | AAAACCCATATTGATTAGAG+TGG | + | chr8.2:35330042-35330061 | MS.gene008982:intron | 30.0% |
! | AATAGTTTTCTTGTGGTACA+AGG | - | chr8.2:35330393-35330412 | None:intergenic | 30.0% |
! | TCATGTCTTTTCAATTAGGA+AGG | - | chr8.2:35329203-35329222 | None:intergenic | 30.0% |
! | TTAGGTATGTTATGGTCTTA+TGG | + | chr8.2:35329279-35329298 | MS.gene008982:intron | 30.0% |
!! | TGTTTTTGACAAAGTGTTCA+AGG | - | chr8.2:35329042-35329061 | None:intergenic | 30.0% |
!!! | TCAAGTTTTGTTGAGTTCAA+TGG | - | chr8.2:35327615-35327634 | None:intergenic | 30.0% |
AAAAGATCAAGATCCCTTTC+AGG | - | chr8.2:35327591-35327610 | None:intergenic | 35.0% | |
AACACTTATAATGAGACGGA+TGG | - | chr8.2:35329944-35329963 | None:intergenic | 35.0% | |
ACAACCAATGAATCATCTCT+TGG | + | chr8.2:35330135-35330154 | MS.gene008982:intron | 35.0% | |
ACTATTTGTGAAGGTTAGCA+TGG | + | chr8.2:35328531-35328550 | MS.gene008982:CDS | 35.0% | |
AGATCAACCTTCCTAAGATA+AGG | - | chr8.2:35328565-35328584 | None:intergenic | 35.0% | |
ATAACGCCTAGGTACAAAAA+TGG | - | chr8.2:35329423-35329442 | None:intergenic | 35.0% | |
ATGAAGATAAAGATGGTGAC+TGG | + | chr8.2:35328881-35328900 | MS.gene008982:CDS | 35.0% | |
CAATTAGGAAGGTTATTTGG+GGG | - | chr8.2:35329192-35329211 | None:intergenic | 35.0% | |
CATCTTTACTAGGAAGCAAA+GGG | - | chr8.2:35327653-35327672 | None:intergenic | 35.0% | |
GACAGATGTCAGATAGTTTA+AGG | + | chr8.2:35328259-35328278 | MS.gene008982:intron | 35.0% | |
GGCATTTCTTTAACTGTAGT+AGG | - | chr8.2:35328016-35328035 | None:intergenic | 35.0% | |
GTAGTAGTAAAGGAATAGCT+AGG | + | chr8.2:35330077-35330096 | MS.gene008982:intron | 35.0% | |
TAAAGAAATGCCAAAGAAGG+TGG | + | chr8.2:35328024-35328043 | MS.gene008982:CDS | 35.0% | |
TAAGTTAGACCATTGAGTCT+GGG | + | chr8.2:35329667-35329686 | MS.gene008982:intron | 35.0% | |
TACACCAAGAGATGATTCAT+TGG | - | chr8.2:35330142-35330161 | None:intergenic | 35.0% | |
TAGGGATTGTTGGAACTATA+GGG | + | chr8.2:35327837-35327856 | MS.gene008982:intron | 35.0% | |
TGTGGATAAAGTTCAAGACT+AGG | - | chr8.2:35330222-35330241 | None:intergenic | 35.0% | |
TTAAGTTAGACCATTGAGTC+TGG | + | chr8.2:35329666-35329685 | MS.gene008982:intron | 35.0% | |
TTACATGTGCGATAACATCA+TGG | - | chr8.2:35329006-35329025 | None:intergenic | 35.0% | |
TTCAAAGAACAATGACGAAG+TGG | + | chr8.2:35328486-35328505 | MS.gene008982:CDS | 35.0% | |
TTCTTAACAATATGCGATGC+AGG | + | chr8.2:35327928-35327947 | MS.gene008982:intron | 35.0% | |
! | CAGACATAGGAACTTGATTT+TGG | + | chr8.2:35329325-35329344 | MS.gene008982:intron | 35.0% |
! | TTCGTCATTGTTCTTTGAAG+TGG | - | chr8.2:35328485-35328504 | None:intergenic | 35.0% |
! | TTTTCTCATCAGACAAGCTT+GGG | - | chr8.2:35327509-35327528 | None:intergenic | 35.0% |
! | TTTTTCTCATCAGACAAGCT+TGG | - | chr8.2:35327510-35327529 | None:intergenic | 35.0% |
!! | ATGTTCAGCTGTTTTACCTT+AGG | + | chr8.2:35328631-35328650 | MS.gene008982:CDS | 35.0% |
!! | ATTATGATTGAAAGTGCCTC+TGG | + | chr8.2:35330321-35330340 | MS.gene008982:intron | 35.0% |
!! | TGCAAATGATTTTAGTGCCT+AGG | + | chr8.2:35327805-35327824 | MS.gene008982:intron | 35.0% |
AAATTGAAGGACTTCCTGCA+TGG | + | chr8.2:35328838-35328857 | MS.gene008982:CDS | 40.0% | |
AACAGCTGAACATCTTCTCA+AGG | - | chr8.2:35328624-35328643 | None:intergenic | 40.0% | |
AAGAACAATGACGAAGTGGA+TGG | + | chr8.2:35328490-35328509 | MS.gene008982:CDS | 40.0% | |
AAGTTGCAACAGATCACCTA+AGG | - | chr8.2:35328650-35328669 | None:intergenic | 40.0% | |
AATCCCTAGGTTAACATCCT+AGG | - | chr8.2:35327825-35327844 | None:intergenic | 40.0% | |
ACATATCAACCCAGACTCAA+TGG | - | chr8.2:35329679-35329698 | None:intergenic | 40.0% | |
ACTCTGTCGCCTTCAAATTT+AGG | - | chr8.2:35327539-35327558 | None:intergenic | 40.0% | |
ACTGTCAACTTGAAGACTGA+TGG | + | chr8.2:35329475-35329494 | MS.gene008982:intron | 40.0% | |
AGTTTGAGAAAAACGGTCCA+AGG | - | chr8.2:35327418-35327437 | None:intergenic | 40.0% | |
ATTTGAAGGCGACAGAGTTA+AGG | + | chr8.2:35327541-35327560 | MS.gene008982:CDS | 40.0% | |
ATTTGCAACACATAACGCCT+AGG | - | chr8.2:35329434-35329453 | None:intergenic | 40.0% | |
CAGCTGCAGTTTGAGAAAAA+CGG | - | chr8.2:35327425-35327444 | None:intergenic | 40.0% | |
CCATCTTTACTAGGAAGCAA+AGG | - | chr8.2:35327654-35327673 | None:intergenic | 40.0% | |
CCTTTGCTTCCTAGTAAAGA+TGG | + | chr8.2:35327651-35327670 | MS.gene008982:CDS | 40.0% | |
CTAGGGATTGTTGGAACTAT+AGG | + | chr8.2:35327836-35327855 | MS.gene008982:intron | 40.0% | |
CTATAGTTCCAACAATCCCT+AGG | - | chr8.2:35327838-35327857 | None:intergenic | 40.0% | |
GAGCAGATTCCATCTTTACT+AGG | - | chr8.2:35327663-35327682 | None:intergenic | 40.0% | |
GATGTTAACCTAGGGATTGT+TGG | + | chr8.2:35327827-35327846 | MS.gene008982:intron | 40.0% | |
GGCCTCCTATTAGATCATTT+AGG | + | chr8.2:35328443-35328462 | MS.gene008982:CDS | 40.0% | |
GTAGTAAAGGAATAGCTAGG+TGG | + | chr8.2:35330080-35330099 | MS.gene008982:intron | 40.0% | |
GTTGAGTGAGAGCAAATTGA+AGG | + | chr8.2:35328825-35328844 | MS.gene008982:CDS | 40.0% | |
TACACTTGATGTACCTCATC+AGG | + | chr8.2:35328766-35328785 | MS.gene008982:intron | 40.0% | |
TCATTGCAGATGTAAACCAG+AGG | - | chr8.2:35330340-35330359 | None:intergenic | 40.0% | |
TTTGTGAAGGTTAGCATGGA+TGG | + | chr8.2:35328535-35328554 | MS.gene008982:CDS | 40.0% | |
! | AACATGCTTGTGCAACCTTT+TGG | + | chr8.2:35329058-35329077 | MS.gene008982:intron | 40.0% |
! | ACATGCTTGTGCAACCTTTT+GGG | + | chr8.2:35329059-35329078 | MS.gene008982:intron | 40.0% |
! | ATGAAGGGTTCTGATGCAAT+TGG | + | chr8.2:35329607-35329626 | MS.gene008982:CDS | 40.0% |
! | GTTGTTTCAGGCAACAAAAG+AGG | + | chr8.2:35327699-35327718 | MS.gene008982:CDS | 40.0% |
! | GTTTTTCTCAAACTGCAGCT+GGG | + | chr8.2:35327424-35327443 | MS.gene008982:CDS | 40.0% |
! | TAGATGAAGAGTGCAGACAT+AGG | + | chr8.2:35329312-35329331 | MS.gene008982:intron | 40.0% |
!! | CAGTTCCATTTGCTGTACAA+GGG | - | chr8.2:35328060-35328079 | None:intergenic | 40.0% |
!! | GTCATTGTTCTTTGAAGTGG+TGG | - | chr8.2:35328482-35328501 | None:intergenic | 40.0% |
ACAGAGCACAAGTTGTTGGT+TGG | + | chr8.2:35328422-35328441 | MS.gene008982:intron | 45.0% | |
AGGAAACACTTCCAGTGTGT+CGG | - | chr8.2:35327730-35327749 | None:intergenic | 45.0% | |
AGTGCCTAGGATGTTAACCT+AGG | + | chr8.2:35327818-35327837 | MS.gene008982:intron | 45.0% | |
ATCTGCATCTCCACAATCCT+TGG | + | chr8.2:35327398-35327417 | MS.gene008982:CDS | 45.0% | |
CCACATATTCAGAACCATGC+AGG | - | chr8.2:35328855-35328874 | None:intergenic | 45.0% | |
CCATGGAAAAATCCAAGAGC+AGG | + | chr8.2:35330467-35330486 | MS.gene008982:CDS | 45.0% | |
CCTTGTACAGCAAATGGAAC+TGG | + | chr8.2:35328058-35328077 | MS.gene008982:CDS | 45.0% | |
CGGTTTGTCTGATTGCTCAT+CGG | + | chr8.2:35327467-35327486 | MS.gene008982:CDS | 45.0% | |
CTCTCTTGTACCACCTTCTT+TGG | - | chr8.2:35328037-35328056 | None:intergenic | 45.0% | |
GAAAAACGGTCCAAGGATTG+TGG | - | chr8.2:35327411-35327430 | None:intergenic | 45.0% | |
GCCTGAAACAACAGTCTTCT+GGG | - | chr8.2:35327691-35327710 | None:intergenic | 45.0% | |
GCGATGCAGGCAAAATATAC+TGG | + | chr8.2:35327941-35327960 | MS.gene008982:intron | 45.0% | |
GCTACTAGGGAGTAAAGAGA+TGG | + | chr8.2:35328210-35328229 | MS.gene008982:intron | 45.0% | |
GTGCCTAGGATGTTAACCTA+GGG | + | chr8.2:35327819-35327838 | MS.gene008982:intron | 45.0% | |
TCACTCAACATTTCTCTCCC+TGG | - | chr8.2:35328814-35328833 | None:intergenic | 45.0% | |
TCTTCTCTTTGCAGCTCCAA+GGG | + | chr8.2:35330444-35330463 | MS.gene008982:intron | 45.0% | |
TGCAGCTGCACTATTTGTGA+AGG | + | chr8.2:35328522-35328541 | MS.gene008982:CDS | 45.0% | |
TGCCTGAAACAACAGTCTTC+TGG | - | chr8.2:35327692-35327711 | None:intergenic | 45.0% | |
TGGATGGTGCTCCTTATCTT+AGG | + | chr8.2:35328551-35328570 | MS.gene008982:CDS | 45.0% | |
TGGTGCTCCTTATCTTAGGA+AGG | + | chr8.2:35328555-35328574 | MS.gene008982:CDS | 45.0% | |
TGTACCTCATCAGGTCAATG+TGG | + | chr8.2:35328775-35328794 | MS.gene008982:intron | 45.0% | |
TGTTCTACTTACTTGGCAGC+TGG | - | chr8.2:35328106-35328125 | None:intergenic | 45.0% | |
TTCTTCTCTTTGCAGCTCCA+AGG | + | chr8.2:35330443-35330462 | MS.gene008982:intron | 45.0% | |
! | ATCTATCTAGCTCCTGCTCT+TGG | - | chr8.2:35330482-35330501 | None:intergenic | 45.0% |
! | CATGCTTGTGCAACCTTTTG+GGG | + | chr8.2:35329060-35329079 | MS.gene008982:intron | 45.0% |
! | CCTGCTCTTGGATTTTTCCA+TGG | - | chr8.2:35330470-35330489 | None:intergenic | 45.0% |
! | CGTTTTTCTCAAACTGCAGC+TGG | + | chr8.2:35327423-35327442 | MS.gene008982:CDS | 45.0% |
! | GCTTGTTGGAGATGTACCAT+GGG | + | chr8.2:35328906-35328925 | MS.gene008982:CDS | 45.0% |
! | GGTTCTGATGCAATTGGCTT+AGG | + | chr8.2:35329613-35329632 | MS.gene008982:CDS | 45.0% |
! | TGCTTGTTGGAGATGTACCA+TGG | + | chr8.2:35328905-35328924 | MS.gene008982:CDS | 45.0% |
! | TTGGATTTTTCCATGGCCCT+TGG | - | chr8.2:35330463-35330482 | None:intergenic | 45.0% |
!! | CCAGTTCCATTTGCTGTACA+AGG | - | chr8.2:35328061-35328080 | None:intergenic | 45.0% |
!! | CCTGCATGGTTCTGAATATG+TGG | + | chr8.2:35328852-35328871 | MS.gene008982:CDS | 45.0% |
!! | TCCCAGAAGACTGTTGTTTC+AGG | + | chr8.2:35327687-35327706 | MS.gene008982:CDS | 45.0% |
AAGGCGACAGAGTTAAGGCT+CGG | + | chr8.2:35327546-35327565 | MS.gene008982:CDS | 50.0% | |
ACAAATAGTGCAGCTGCACC+AGG | - | chr8.2:35328520-35328539 | None:intergenic | 50.0% | |
AGATGCAGATGCTACCGTTG+AGG | - | chr8.2:35327388-35327407 | None:intergenic | 50.0% | |
CACGACAGAGCACAAGTTGT+TGG | + | chr8.2:35328418-35328437 | MS.gene008982:intron | 50.0% | |
CGAACCACATTGACCTGATG+AGG | - | chr8.2:35328782-35328801 | None:intergenic | 50.0% | |
CTAGGAAGCAAAGGGAAGAG+CGG | - | chr8.2:35327645-35327664 | None:intergenic | 50.0% | |
GACGAAGTGGATGGAAAACC+TGG | + | chr8.2:35328499-35328518 | MS.gene008982:CDS | 50.0% | |
GAGAGCCCTTGTACAGCAAA+TGG | + | chr8.2:35328052-35328071 | MS.gene008982:CDS | 50.0% | |
GATGGTGACTGGATGCTTGT+TGG | + | chr8.2:35328892-35328911 | MS.gene008982:CDS | 50.0% | |
TCAGGTCAATGTGGTTCGCA+TGG | + | chr8.2:35328784-35328803 | MS.gene008982:intron | 50.0% | |
TGGATCTCAGTCGCCTGAAA+GGG | + | chr8.2:35327575-35327594 | MS.gene008982:CDS | 50.0% | |
! | AAGAGGTTTTGCCGACACAC+TGG | + | chr8.2:35327716-35327735 | MS.gene008982:CDS | 50.0% |
! | GTAGTAGGTTGAGCTCCAGA+AGG | - | chr8.2:35328001-35328020 | None:intergenic | 50.0% |
! | TGCTGCTTCCTGAAGAGGAA+GGG | + | chr8.2:35327352-35327371 | MS.gene008982:CDS | 50.0% |
!! | CACACTGGAAGTGTTTCCTG+AGG | + | chr8.2:35327731-35327750 | MS.gene008982:CDS | 50.0% |
AGGGCAGAGCAACACCTCAA+CGG | + | chr8.2:35327371-35327390 | MS.gene008982:CDS | 55.0% | |
CAAGGTCAGACGACAGTTCC+TGG | - | chr8.2:35328606-35328625 | None:intergenic | 55.0% | |
CTGCTTTCGCCAAGACCTTC+TGG | + | chr8.2:35327983-35328002 | MS.gene008982:CDS | 55.0% | |
CTGGATCTCAGTCGCCTGAA+AGG | + | chr8.2:35327574-35327593 | MS.gene008982:CDS | 55.0% | |
CTTTCAGGCGACTGAGATCC+AGG | - | chr8.2:35327576-35327595 | None:intergenic | 55.0% | |
GAGTTAAGGCTCGGACTTCC+TGG | + | chr8.2:35327555-35327574 | MS.gene008982:CDS | 55.0% | |
GGTTGAGCTCCAGAAGGTCT+TGG | - | chr8.2:35327995-35328014 | None:intergenic | 55.0% | |
TCCTCTTCAGGAAGCAGCAG+TGG | - | chr8.2:35327351-35327370 | None:intergenic | 55.0% | |
TCTTCAGGAAGCAGCAGTGG+CGG | - | chr8.2:35327348-35327367 | None:intergenic | 55.0% | |
TTGCTCTGCCCTTCCTCTTC+AGG | - | chr8.2:35327363-35327382 | None:intergenic | 55.0% | |
! | CTGCTGCTTCCTGAAGAGGA+AGG | + | chr8.2:35327351-35327370 | MS.gene008982:CDS | 55.0% |
AGCTGGTGCACTGCCACTGA+TGG | - | chr8.2:35328089-35328108 | None:intergenic | 60.0% | |
CTTTGCAGCTCCAAGGGCCA+TGG | + | chr8.2:35330450-35330469 | MS.gene008982:intron | 60.0% | |
GCTGGTGCACTGCCACTGAT+GGG | - | chr8.2:35328088-35328107 | None:intergenic | 60.0% | |
GGAACTGGAGCTCCCATCAG+TGG | + | chr8.2:35328073-35328092 | MS.gene008982:CDS | 60.0% | |
GTGGTTCGCATGGAGCTCCA+GGG | + | chr8.2:35328794-35328813 | MS.gene008982:CDS | 60.0% | |
TGTGGTTCGCATGGAGCTCC+AGG | + | chr8.2:35328793-35328812 | MS.gene008982:CDS | 60.0% | |
! | GCCACTGCTGCTTCCTGAAG+AGG | + | chr8.2:35327347-35327366 | MS.gene008982:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 35327339 | 35330521 | 35327339 | ID=MS.gene008982 |
chr8.2 | mRNA | 35327339 | 35330521 | 35327339 | ID=MS.gene008982.t1;Parent=MS.gene008982 |
chr8.2 | exon | 35327339 | 35327752 | 35327339 | ID=MS.gene008982.t1.exon1;Parent=MS.gene008982.t1 |
chr8.2 | CDS | 35327339 | 35327752 | 35327339 | ID=cds.MS.gene008982.t1;Parent=MS.gene008982.t1 |
chr8.2 | exon | 35327950 | 35328113 | 35327950 | ID=MS.gene008982.t1.exon2;Parent=MS.gene008982.t1 |
chr8.2 | CDS | 35327950 | 35328113 | 35327950 | ID=cds.MS.gene008982.t1;Parent=MS.gene008982.t1 |
chr8.2 | exon | 35328426 | 35328652 | 35328426 | ID=MS.gene008982.t1.exon3;Parent=MS.gene008982.t1 |
chr8.2 | CDS | 35328426 | 35328652 | 35328426 | ID=cds.MS.gene008982.t1;Parent=MS.gene008982.t1 |
chr8.2 | exon | 35328788 | 35328929 | 35328788 | ID=MS.gene008982.t1.exon4;Parent=MS.gene008982.t1 |
chr8.2 | CDS | 35328788 | 35328929 | 35328788 | ID=cds.MS.gene008982.t1;Parent=MS.gene008982.t1 |
chr8.2 | exon | 35329573 | 35329634 | 35329573 | ID=MS.gene008982.t1.exon5;Parent=MS.gene008982.t1 |
chr8.2 | CDS | 35329573 | 35329634 | 35329573 | ID=cds.MS.gene008982.t1;Parent=MS.gene008982.t1 |
chr8.2 | exon | 35330335 | 35330368 | 35330335 | ID=MS.gene008982.t1.exon6;Parent=MS.gene008982.t1 |
chr8.2 | CDS | 35330335 | 35330368 | 35330335 | ID=cds.MS.gene008982.t1;Parent=MS.gene008982.t1 |
chr8.2 | exon | 35330458 | 35330521 | 35330458 | ID=MS.gene008982.t1.exon7;Parent=MS.gene008982.t1 |
chr8.2 | CDS | 35330458 | 35330521 | 35330458 | ID=cds.MS.gene008982.t1;Parent=MS.gene008982.t1 |
Gene Sequence |
Protein sequence |