Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008993.t1 | XP_013446059.1 | 96.3 | 401 | 15 | 0 | 1 | 401 | 1 | 401 | 1.90E-184 | 655.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008993.t1 | Q8H100 | 68.4 | 412 | 115 | 6 | 2 | 401 | 5 | 413 | 6.2e-123 | 442.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008993.t1 | G7LHQ6 | 96.3 | 401 | 15 | 0 | 1 | 401 | 1 | 401 | 1.4e-184 | 655.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene038430 | MS.gene008993 | PPI |
| MS.gene049052 | MS.gene008993 | PPI |
| MS.gene008993 | MS.gene015841 | PPI |
| MS.gene008993 | MS.gene05967 | PPI |
| MS.gene008993 | MS.gene65987 | PPI |
| MS.gene008993 | MS.gene063343 | PPI |
| MS.gene008993 | MS.gene008994 | PPI |
| MS.gene008993 | MS.gene048437 | PPI |
| MS.gene66388 | MS.gene008993 | PPI |
| MS.gene030337 | MS.gene008993 | PPI |
| MS.gene20137 | MS.gene008993 | PPI |
| MS.gene71181 | MS.gene008993 | PPI |
| MS.gene008993 | MS.gene75024 | PPI |
| MS.gene048438 | MS.gene008993 | PPI |
| MS.gene049051 | MS.gene008993 | PPI |
| MS.gene65986 | MS.gene008993 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008993.t1 | MTR_8g067090 | 95.761 | 401 | 17 | 0 | 1 | 401 | 1 | 401 | 0.0 | 730 |
| MS.gene008993.t1 | MTR_8g471120 | 95.761 | 401 | 17 | 0 | 1 | 401 | 1 | 401 | 0.0 | 730 |
| MS.gene008993.t1 | MTR_8g067080 | 77.482 | 413 | 77 | 8 | 1 | 401 | 1 | 409 | 0.0 | 604 |
| MS.gene008993.t1 | MTR_8g471110 | 77.482 | 413 | 77 | 8 | 1 | 401 | 1 | 409 | 0.0 | 604 |
| MS.gene008993.t1 | MTR_8g067080 | 77.240 | 413 | 76 | 9 | 1 | 401 | 1 | 407 | 0.0 | 596 |
| MS.gene008993.t1 | MTR_7g099830 | 42.537 | 134 | 72 | 1 | 13 | 146 | 7 | 135 | 3.66e-31 | 124 |
| MS.gene008993.t1 | MTR_1g069000 | 40.000 | 145 | 76 | 3 | 13 | 151 | 7 | 146 | 4.46e-28 | 115 |
| MS.gene008993.t1 | MTR_8g464390 | 37.500 | 176 | 81 | 6 | 16 | 164 | 23 | 196 | 3.77e-24 | 104 |
| MS.gene008993.t1 | MTR_6g080710 | 43.077 | 130 | 64 | 3 | 16 | 136 | 23 | 151 | 2.91e-23 | 98.6 |
| MS.gene008993.t1 | MTR_2g080950 | 35.185 | 162 | 87 | 5 | 16 | 169 | 23 | 174 | 5.46e-22 | 97.8 |
| MS.gene008993.t1 | MTR_3g017500 | 54.688 | 64 | 28 | 1 | 22 | 84 | 33 | 96 | 7.30e-18 | 84.7 |
| MS.gene008993.t1 | MTR_3g017500 | 54.688 | 64 | 28 | 1 | 22 | 84 | 63 | 126 | 1.67e-17 | 84.0 |
| MS.gene008993.t1 | MTR_2g030230 | 38.614 | 101 | 57 | 3 | 13 | 109 | 21 | 120 | 2.65e-17 | 82.8 |
| MS.gene008993.t1 | MTR_8g088320 | 38.614 | 101 | 57 | 4 | 13 | 109 | 12 | 111 | 1.29e-16 | 80.5 |
| MS.gene008993.t1 | MTR_8g038400 | 50.000 | 64 | 31 | 1 | 22 | 84 | 29 | 92 | 5.40e-16 | 79.3 |
| MS.gene008993.t1 | MTR_4g074170 | 34.646 | 127 | 73 | 4 | 22 | 138 | 491 | 617 | 2.43e-14 | 75.5 |
| MS.gene008993.t1 | MTR_7g020860 | 47.761 | 67 | 33 | 1 | 22 | 86 | 514 | 580 | 1.29e-13 | 73.2 |
| MS.gene008993.t1 | MTR_7g020860 | 47.761 | 67 | 33 | 1 | 22 | 86 | 514 | 580 | 1.35e-13 | 72.8 |
| MS.gene008993.t1 | MTR_8g100100 | 46.753 | 77 | 36 | 2 | 12 | 86 | 499 | 572 | 1.31e-12 | 70.1 |
| MS.gene008993.t1 | MTR_8g100100 | 46.753 | 77 | 36 | 2 | 12 | 86 | 505 | 578 | 1.35e-12 | 70.1 |
| MS.gene008993.t1 | MTR_3g098680 | 45.946 | 74 | 35 | 2 | 12 | 83 | 502 | 572 | 8.13e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene008993.t1 | AT4G17890 | 67.233 | 412 | 120 | 6 | 2 | 401 | 5 | 413 | 0.0 | 528 |
| MS.gene008993.t1 | AT5G46750 | 63.171 | 410 | 134 | 7 | 1 | 401 | 1 | 402 | 1.20e-175 | 496 |
| MS.gene008993.t1 | AT4G17890 | 66.755 | 379 | 111 | 6 | 2 | 368 | 5 | 380 | 7.43e-170 | 480 |
| MS.gene008993.t1 | AT2G35210 | 62.406 | 399 | 137 | 8 | 1 | 392 | 1 | 393 | 6.19e-157 | 448 |
| MS.gene008993.t1 | AT2G35210 | 60.117 | 341 | 124 | 7 | 1 | 335 | 1 | 335 | 1.11e-126 | 370 |
| MS.gene008993.t1 | AT3G53710 | 45.865 | 133 | 67 | 1 | 13 | 145 | 7 | 134 | 3.40e-33 | 129 |
| MS.gene008993.t1 | AT3G53710 | 45.865 | 133 | 67 | 1 | 13 | 145 | 7 | 134 | 3.40e-33 | 129 |
| MS.gene008993.t1 | AT3G53710 | 45.865 | 133 | 67 | 1 | 13 | 145 | 7 | 134 | 3.40e-33 | 129 |
| MS.gene008993.t1 | AT2G37550 | 45.038 | 131 | 67 | 1 | 13 | 143 | 7 | 132 | 7.32e-33 | 129 |
| MS.gene008993.t1 | AT2G37550 | 45.038 | 131 | 67 | 1 | 13 | 143 | 7 | 132 | 7.32e-33 | 129 |
| MS.gene008993.t1 | AT5G54310 | 33.684 | 190 | 95 | 5 | 12 | 170 | 18 | 207 | 5.37e-23 | 100 |
| MS.gene008993.t1 | AT3G17660 | 46.250 | 80 | 43 | 0 | 12 | 91 | 18 | 97 | 8.83e-22 | 92.4 |
| MS.gene008993.t1 | AT3G17660 | 46.250 | 80 | 43 | 0 | 12 | 91 | 18 | 97 | 1.78e-21 | 92.8 |
| MS.gene008993.t1 | AT3G17660 | 46.250 | 80 | 43 | 0 | 12 | 91 | 18 | 97 | 7.85e-21 | 91.3 |
| MS.gene008993.t1 | AT3G07940 | 49.315 | 73 | 36 | 1 | 13 | 84 | 50 | 122 | 4.33e-18 | 84.0 |
| MS.gene008993.t1 | AT3G07940 | 49.315 | 73 | 36 | 1 | 13 | 84 | 50 | 122 | 9.62e-18 | 84.7 |
| MS.gene008993.t1 | AT4G21160 | 42.500 | 80 | 45 | 1 | 13 | 91 | 18 | 97 | 1.50e-17 | 83.6 |
| MS.gene008993.t1 | AT4G21160 | 42.500 | 80 | 45 | 1 | 13 | 91 | 18 | 97 | 1.50e-17 | 83.6 |
| MS.gene008993.t1 | AT4G21160 | 42.500 | 80 | 45 | 1 | 13 | 91 | 18 | 97 | 1.50e-17 | 83.6 |
| MS.gene008993.t1 | AT4G21160 | 42.500 | 80 | 45 | 1 | 13 | 91 | 18 | 97 | 1.50e-17 | 83.6 |
| MS.gene008993.t1 | AT4G05330 | 41.250 | 80 | 46 | 1 | 13 | 91 | 18 | 97 | 1.17e-16 | 80.9 |
| MS.gene008993.t1 | AT4G05330 | 41.250 | 80 | 46 | 1 | 13 | 91 | 18 | 97 | 1.17e-16 | 80.9 |
| MS.gene008993.t1 | AT4G16220 | 58.824 | 68 | 22 | 2 | 64 | 128 | 121 | 185 | 9.61e-15 | 73.9 |
| MS.gene008993.t1 | AT1G60860 | 50.000 | 64 | 30 | 1 | 22 | 83 | 368 | 431 | 3.47e-14 | 74.7 |
| MS.gene008993.t1 | AT1G60860 | 50.000 | 64 | 30 | 1 | 22 | 83 | 479 | 542 | 3.52e-14 | 74.7 |
| MS.gene008993.t1 | AT1G60860 | 50.000 | 64 | 30 | 1 | 22 | 83 | 308 | 371 | 4.62e-14 | 74.3 |
| MS.gene008993.t1 | AT5G13300 | 43.836 | 73 | 39 | 1 | 22 | 92 | 513 | 585 | 4.78e-14 | 74.7 |
| MS.gene008993.t1 | AT1G10870 | 51.562 | 64 | 29 | 1 | 22 | 83 | 479 | 542 | 7.58e-14 | 73.9 |
| MS.gene008993.t1 | AT1G10870 | 51.562 | 64 | 29 | 1 | 22 | 83 | 479 | 542 | 8.02e-14 | 73.9 |
| MS.gene008993.t1 | AT5G61980 | 48.438 | 64 | 31 | 1 | 22 | 83 | 510 | 573 | 9.42e-14 | 73.6 |
| MS.gene008993.t1 | AT3G17660 | 53.061 | 49 | 23 | 0 | 12 | 60 | 18 | 66 | 1.13e-12 | 67.4 |
Find 70 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGGTTTCCCGAAGAAATT+TGG | 0.149796 | 8.2:+35513369 | MS.gene008993:CDS |
| CAGCATCTCTTGCTTTGTTC+TGG | 0.224885 | 8.2:-35514259 | None:intergenic |
| ACTGGAGCAGGTGGTTCTTC+AGG | 0.274169 | 8.2:-35513180 | None:intergenic |
| GCAGACTTTGGAATGGATAA+TGG | 0.308875 | 8.2:+35513351 | MS.gene008993:CDS |
| CAAGTTGAAGTCTGAAAATA+AGG | 0.314511 | 8.2:+35510755 | MS.gene008993:CDS |
| CTCCTTGATGACAGATCTTC+AGG | 0.319205 | 8.2:+35515144 | MS.gene008993:CDS |
| GTTGCTTATCAGAGTTCTAA+TGG | 0.323772 | 8.2:+35512792 | MS.gene008993:CDS |
| CAGAGTTCTAATGGACTTCC+TGG | 0.334434 | 8.2:+35512801 | MS.gene008993:CDS |
| TCTCTCCTGCAATGTTCTTA+AGG | 0.357125 | 8.2:-35515093 | None:intergenic |
| TCAAACTTCTTTGCAGACTT+TGG | 0.358116 | 8.2:+35513339 | MS.gene008993:CDS |
| CCTGTACAACTCTGCAGCTC+TGG | 0.358193 | 8.2:-35512706 | None:intergenic |
| CAGTCGTCTGAGTTGGATTC+CGG | 0.360915 | 8.2:+35513276 | MS.gene008993:CDS |
| AATAATTTGAAGAAGTCTAT+TGG | 0.365206 | 8.2:+35512921 | MS.gene008993:CDS |
| TCTGAAGACGAGGTTCTTAT+CGG | 0.372274 | 8.2:-35510727 | None:intergenic |
| TCTTCCCTTAAGAACATTGC+AGG | 0.374215 | 8.2:+35515088 | MS.gene008993:CDS |
| AAGAACATTGCAGGAGAGAC+TGG | 0.375056 | 8.2:+35515097 | MS.gene008993:CDS |
| GATTGCTTTGCAGGCACAAC+AGG | 0.384787 | 8.2:+35515060 | MS.gene008993:intron |
| TTACCTTCTTATTGAGCTTA+CGG | 0.385740 | 8.2:-35512980 | None:intergenic |
| CTCTCCTGCAATGTTCTTAA+GGG | 0.388884 | 8.2:-35515092 | None:intergenic |
| GTATTTGACCCAAATTTCTT+CGG | 0.390787 | 8.2:-35513378 | None:intergenic |
| TATTTGACCCAAATTTCTTC+GGG | 0.392303 | 8.2:-35513377 | None:intergenic |
| TACCTTCTTATTGAGCTTAC+GGG | 0.406262 | 8.2:-35512979 | None:intergenic |
| ATGGTTTCCCGAAGAAATTT+GGG | 0.415023 | 8.2:+35513370 | MS.gene008993:CDS |
| CTAATGGACTTCCTGGTGTC+AGG | 0.438196 | 8.2:+35512808 | MS.gene008993:CDS |
| TTGTTTGTCGTGGATGGAAC+TGG | 0.440846 | 8.2:-35513198 | None:intergenic |
| ATTGAATGTATTTGAACCTC+CGG | 0.459068 | 8.2:-35513295 | None:intergenic |
| GAAGGAAGTAGCTAAAAGTA+TGG | 0.460701 | 8.2:+35512740 | MS.gene008993:CDS |
| CCAGAGCTGCAGAGTTGTAC+AGG | 0.466381 | 8.2:+35512706 | MS.gene008993:CDS |
| ACGAGAAGTCATAGATGGTC+TGG | 0.473294 | 8.2:-35513232 | None:intergenic |
| TTAGAACTCTGATAAGCAAC+AGG | 0.481375 | 8.2:-35512789 | None:intergenic |
| CTTCTTTGCAGACTTTGGAA+TGG | 0.490698 | 8.2:+35513344 | MS.gene008993:CDS |
| TCAAAACGAGAAGTCATAGA+TGG | 0.514014 | 8.2:-35513237 | None:intergenic |
| ATCGCTAGCAGCAAGATCAA+TGG | 0.517560 | 8.2:-35514886 | None:intergenic |
| AAAAGTATGGCTGAAGAGAA+AGG | 0.520493 | 8.2:+35512753 | MS.gene008993:CDS |
| TGATAAGCAACAGGTGATGA+AGG | 0.530089 | 8.2:-35512780 | None:intergenic |
| GATCTACAAACTTAGACTCA+TGG | 0.530785 | 8.2:+35512574 | MS.gene008993:intron |
| AAGCAACATGGTTGGACCGA+TGG | 0.531171 | 8.2:+35512657 | MS.gene008993:CDS |
| AAGATCAATGGAGGAATCTC+CGG | 0.531888 | 8.2:-35514874 | None:intergenic |
| CGGAATCCAACTCAGACGAC+TGG | 0.539405 | 8.2:-35513275 | None:intergenic |
| TGTCATCAAGGAGGAGGCCA+AGG | 0.539734 | 8.2:-35515134 | None:intergenic |
| ACAATGTTGTTTGTCGTGGA+TGG | 0.543620 | 8.2:-35513204 | None:intergenic |
| TCTGCCGTTCATCGAAGTCT+CGG | 0.549396 | 8.2:+35511019 | MS.gene008993:CDS |
| GTCGTGGATGGAACTGGAGC+AGG | 0.550054 | 8.2:-35513192 | None:intergenic |
| GCAAAGAAGTTTGATGACTT+CGG | 0.551658 | 8.2:-35513330 | None:intergenic |
| ACTATTGTATGCGAGGCTCT+AGG | 0.552723 | 8.2:-35512894 | None:intergenic |
| TACGTTACTGACGCCCATGT+TGG | 0.552830 | 8.2:-35510971 | None:intergenic |
| TAATGTCCAGTCGTCTGAGT+TGG | 0.557059 | 8.2:+35513269 | MS.gene008993:CDS |
| ACATGGGCGTCAGTAACGTA+TGG | 0.567163 | 8.2:+35510974 | MS.gene008993:CDS |
| AAGATCTGTCATCAAGGAGG+AGG | 0.586831 | 8.2:-35515140 | None:intergenic |
| TGCCCGTAAGCTCAATAAGA+AGG | 0.587772 | 8.2:+35512977 | MS.gene008993:CDS |
| ATTTGATACTATTGTATGCG+AGG | 0.588190 | 8.2:-35512901 | None:intergenic |
| GTACAGGCAAATTCTTGCGA+AGG | 0.591745 | 8.2:+35512722 | MS.gene008993:CDS |
| AGAACATTGCAGGAGAGACT+GGG | 0.594396 | 8.2:+35515098 | MS.gene008993:CDS |
| AAAAGAAAACACATTAGAGA+AGG | 0.594618 | 8.2:+35512845 | MS.gene008993:CDS |
| CAACATGGTTGGACCGATGG+TGG | 0.600620 | 8.2:+35512660 | MS.gene008993:CDS |
| AATTTGAAGAAGTCTATTGG+TGG | 0.609978 | 8.2:+35512924 | MS.gene008993:CDS |
| TCGTCTGAGTTGGATTCCGG+AGG | 0.612556 | 8.2:+35513279 | MS.gene008993:CDS |
| GTCCTGAAGATCTGTCATCA+AGG | 0.612922 | 8.2:-35515146 | None:intergenic |
| ACCTCATTGATCCTGACACC+AGG | 0.614869 | 8.2:-35512819 | None:intergenic |
| AGACACAATGTTGTTTGTCG+TGG | 0.632815 | 8.2:-35513208 | None:intergenic |
| TGCTCATAGAGAGACTCACT+TGG | 0.640748 | 8.2:-35513153 | None:intergenic |
| AACACCGAGACTTCGATGAA+CGG | 0.641366 | 8.2:-35511023 | None:intergenic |
| CGGCAGAACAATCAATGCAG+AGG | 0.642639 | 8.2:-35511003 | None:intergenic |
| GCAATACGAAGAATCCAACA+TGG | 0.667289 | 8.2:+35510957 | MS.gene008993:CDS |
| GCTAGCAGCAAGATCAATGG+AGG | 0.673995 | 8.2:-35514883 | None:intergenic |
| GTGGATGGAACTGGAGCAGG+TGG | 0.679612 | 8.2:-35513189 | None:intergenic |
| TTCGTCTGCCATCTCCAGTG+CGG | 0.684569 | 8.2:+35514836 | MS.gene008993:CDS |
| CAATACGAAGAATCCAACAT+GGG | 0.708002 | 8.2:+35510958 | MS.gene008993:CDS |
| CTGAAGATCTGTCATCAAGG+AGG | 0.712381 | 8.2:-35515143 | None:intergenic |
| TCCTGGTGTCAGGATCAATG+AGG | 0.723936 | 8.2:+35512818 | MS.gene008993:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATAAAATATGTAATGA+TGG | + | chr8.2:35511292-35511311 | MS.gene008993:intron | 10.0% |
| !! | ATCAATATTATATTAGAATT+AGG | + | chr8.2:35512082-35512101 | MS.gene008993:intron | 10.0% |
| !! | AATAAAAATAAATAAGTGCA+TGG | - | chr8.2:35514147-35514166 | None:intergenic | 15.0% |
| !! | CCAAAAAAAAAAAAAAGATA+TGG | + | chr8.2:35513991-35514010 | MS.gene008993:intron | 15.0% |
| !! | TAATGTCACATTAAAATTTA+AGG | - | chr8.2:35513680-35513699 | None:intergenic | 15.0% |
| !! | TGTCTAATTTATCATTTAAA+TGG | + | chr8.2:35511935-35511954 | MS.gene008993:intron | 15.0% |
| !! | TTAAATCATTGAAAAATTCT+AGG | + | chr8.2:35513890-35513909 | MS.gene008993:intron | 15.0% |
| !! | TTCTTATTGAAAAATCTTAT+AGG | + | chr8.2:35514755-35514774 | MS.gene008993:intron | 15.0% |
| !!! | ATAATTTTCCTTAAGAAATT+TGG | - | chr8.2:35514682-35514701 | None:intergenic | 15.0% |
| !!! | CCATATCTTTTTTTTTTTTT+TGG | - | chr8.2:35513994-35514013 | None:intergenic | 15.0% |
| !!! | GTGATGATTTTTTTTTTTTT+TGG | + | chr8.2:35510915-35510934 | MS.gene008993:intron | 15.0% |
| !!! | TTTCCTTAATTAATTTTACT+AGG | + | chr8.2:35512353-35512372 | MS.gene008993:intron | 15.0% |
| !!! | TTTCTTTTGATTTTTTATCT+TGG | + | chr8.2:35510799-35510818 | MS.gene008993:intron | 15.0% |
| !!! | TTTTTCTTTCAAAAATTTGT+CGG | + | chr8.2:35513653-35513672 | MS.gene008993:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTGGATCA+TGG | - | chr8.2:35513987-35514006 | None:intergenic | 15.0% |
| !! | AAATTCTTAGAGATGAATTT+AGG | - | chr8.2:35514467-35514486 | None:intergenic | 20.0% |
| !! | AATAATTTGAAGAAGTCTAT+TGG | + | chr8.2:35512921-35512940 | MS.gene008993:CDS | 20.0% |
| !! | AATTCTTAGAGATGAATTTA+GGG | - | chr8.2:35514466-35514485 | None:intergenic | 20.0% |
| !! | ACAACCATAAAATTAATTCA+GGG | - | chr8.2:35513712-35513731 | None:intergenic | 20.0% |
| !! | ACTAATATAATTGGCATTTA+TGG | + | chr8.2:35514599-35514618 | MS.gene008993:intron | 20.0% |
| !! | ACTCATATGAACAAAAATAT+TGG | - | chr8.2:35512303-35512322 | None:intergenic | 20.0% |
| !! | ATCAATATTATATTAGAACC+AGG | + | chr8.2:35512026-35512045 | MS.gene008993:intron | 20.0% |
| !! | CAACCTAGTAAAATTAATTA+AGG | - | chr8.2:35512359-35512378 | None:intergenic | 20.0% |
| !! | CGAAAAATGACTAATATAAT+TGG | + | chr8.2:35514590-35514609 | MS.gene008993:intron | 20.0% |
| !! | TAAAAAATACACTAAACTCA+CGG | - | chr8.2:35511517-35511536 | None:intergenic | 20.0% |
| !! | TATAAAATATGTAATGATGG+TGG | + | chr8.2:35511295-35511314 | MS.gene008993:intron | 20.0% |
| !! | TCAAAGGGTTATATAATAAA+AGG | + | chr8.2:35513592-35513611 | MS.gene008993:intron | 20.0% |
| !! | TGATTAATGAAAAACACAAA+AGG | - | chr8.2:35512010-35512029 | None:intergenic | 20.0% |
| !! | TGTATAAATATCAAACTGAA+CGG | - | chr8.2:35511676-35511695 | None:intergenic | 20.0% |
| !! | TTAATCTAGAAAGATTTGAT+TGG | + | chr8.2:35512392-35512411 | MS.gene008993:intron | 20.0% |
| !!! | ATCTCTAAGAATTTTTTTCA+TGG | + | chr8.2:35514473-35514492 | MS.gene008993:intron | 20.0% |
| !!! | ATGTAGTTTTTGTTTGAAAA+GGG | + | chr8.2:35511245-35511264 | MS.gene008993:intron | 20.0% |
| !!! | CAACTAAAAATAATGAGTTT+TGG | + | chr8.2:35512606-35512625 | MS.gene008993:CDS | 20.0% |
| !!! | CTTAATTAATTTTACTAGGT+TGG | + | chr8.2:35512357-35512376 | MS.gene008993:intron | 20.0% |
| !!! | GAATAATGGTAATGAAATTA+GGG | - | chr8.2:35514981-35515000 | None:intergenic | 20.0% |
| !!! | TAGTGCATTAATTTGTATTA+TGG | + | chr8.2:35511332-35511351 | MS.gene008993:intron | 20.0% |
| !!! | TATGTAGTTTTTGTTTGAAA+AGG | + | chr8.2:35511244-35511263 | MS.gene008993:intron | 20.0% |
| !!! | TCTAGTTTTGGTAATTAAAT+TGG | - | chr8.2:35513736-35513755 | None:intergenic | 20.0% |
| !!! | TGAATAATGGTAATGAAATT+AGG | - | chr8.2:35514982-35515001 | None:intergenic | 20.0% |
| !!! | TTGTCTTTTTTTTTGTATAC+TGG | + | chr8.2:35513040-35513059 | MS.gene008993:intron | 20.0% |
| ! | AAAAGAAAACACATTAGAGA+AGG | + | chr8.2:35512845-35512864 | MS.gene008993:CDS | 25.0% |
| ! | AAAGACAAAAATAACCCAAT+AGG | - | chr8.2:35513071-35513090 | None:intergenic | 25.0% |
| ! | ATTCTTAGAGATGAATTTAG+GGG | - | chr8.2:35514465-35514484 | None:intergenic | 25.0% |
| ! | ATTTGACACCAAATTTCTTA+AGG | + | chr8.2:35514671-35514690 | MS.gene008993:intron | 25.0% |
| ! | CAAAATTTCACTCAATTAAG+AGG | + | chr8.2:35512255-35512274 | MS.gene008993:intron | 25.0% |
| ! | CAAGAACTAAAACTGAATAA+TGG | - | chr8.2:35514995-35515014 | None:intergenic | 25.0% |
| ! | CACAACCATAAAATTAATTC+AGG | - | chr8.2:35513713-35513732 | None:intergenic | 25.0% |
| ! | GCAGTAAAATACTATAAGAA+AGG | - | chr8.2:35514322-35514341 | None:intergenic | 25.0% |
| ! | GTGCTATAATAACAATATCA+AGG | + | chr8.2:35513806-35513825 | MS.gene008993:intron | 25.0% |
| ! | GTTTCTATATCAATAACGAA+AGG | - | chr8.2:35514941-35514960 | None:intergenic | 25.0% |
| ! | TAGAAGATATGCTTTAACAA+AGG | + | chr8.2:35513752-35513771 | MS.gene008993:intron | 25.0% |
| ! | TTAATTGAGAAAAGAAACTG+AGG | - | chr8.2:35512418-35512437 | None:intergenic | 25.0% |
| ! | TTATTGATATAGAAACGTCA+TGG | + | chr8.2:35514945-35514964 | MS.gene008993:intron | 25.0% |
| ! | TTCGAGATTATTGTATTTAG+TGG | - | chr8.2:35514574-35514593 | None:intergenic | 25.0% |
| ! | TTGAATTTCCATGTTGTATA+AGG | + | chr8.2:35512148-35512167 | MS.gene008993:intron | 25.0% |
| ! | TTGATAGAATAGAATGAAGA+AGG | + | chr8.2:35512514-35512533 | MS.gene008993:intron | 25.0% |
| ! | TTGTAGATCTACATAACAAA+AGG | - | chr8.2:35512563-35512582 | None:intergenic | 25.0% |
| !! | ATCTCCCTGAATTAATTTTA+TGG | + | chr8.2:35513705-35513724 | MS.gene008993:intron | 25.0% |
| !! | ATCTTGTTATAACTTTGAAC+TGG | - | chr8.2:35513533-35513552 | None:intergenic | 25.0% |
| !! | ATTTCGTCATCTCAATTTTT+CGG | + | chr8.2:35514233-35514252 | MS.gene008993:CDS | 25.0% |
| !! | CAAATTTTCTTTAAGCAACA+TGG | + | chr8.2:35512645-35512664 | MS.gene008993:CDS | 25.0% |
| !! | GGTAAAATGATTTTGTGATT+AGG | + | chr8.2:35511266-35511285 | MS.gene008993:intron | 25.0% |
| !! | GTTTTATGAGAAAGATGAAA+GGG | + | chr8.2:35511540-35511559 | MS.gene008993:intron | 25.0% |
| !! | TACAAAGAAAATTAGCTCTT+TGG | - | chr8.2:35514727-35514746 | None:intergenic | 25.0% |
| !! | TGTTTTATGAGAAAGATGAA+AGG | + | chr8.2:35511539-35511558 | MS.gene008993:intron | 25.0% |
| !! | TTTTGTCATGTATAAGATTG+AGG | + | chr8.2:35514169-35514188 | MS.gene008993:intron | 25.0% |
| !!! | AATTTGATTTGAATAGTCGA+TGG | + | chr8.2:35511194-35511213 | MS.gene008993:intron | 25.0% |
| !!! | CTAAAAATAATGAGTTTTGG+AGG | + | chr8.2:35512609-35512628 | MS.gene008993:CDS | 25.0% |
| !!! | TAAAGCATATCTTCTAGTTT+TGG | - | chr8.2:35513748-35513767 | None:intergenic | 25.0% |
| AAACAAACTTAAGACTCAAC+CGG | + | chr8.2:35513918-35513937 | MS.gene008993:intron | 30.0% | |
| AATTTGAAGAAGTCTATTGG+TGG | + | chr8.2:35512924-35512943 | MS.gene008993:CDS | 30.0% | |
| ACCTCTACAAAAATAAACCA+TGG | + | chr8.2:35513943-35513962 | MS.gene008993:intron | 30.0% | |
| ACTAATATGACAGGTATTCT+AGG | - | chr8.2:35514545-35514564 | None:intergenic | 30.0% | |
| ATAAATAAGTGCATGGCAAA+AGG | - | chr8.2:35514140-35514159 | None:intergenic | 30.0% | |
| ATAGACAAGATGAGATAAAG+AGG | + | chr8.2:35511568-35511587 | MS.gene008993:intron | 30.0% | |
| ATTGAATGTATTTGAACCTC+CGG | - | chr8.2:35513298-35513317 | None:intergenic | 30.0% | |
| ATTTGAATAGTCGATGGAAT+TGG | + | chr8.2:35511200-35511219 | MS.gene008993:intron | 30.0% | |
| ATTTGATACTATTGTATGCG+AGG | - | chr8.2:35512904-35512923 | None:intergenic | 30.0% | |
| GATTATCAATCACCTGTTAT+GGG | + | chr8.2:35514370-35514389 | MS.gene008993:intron | 30.0% | |
| GGATCATTTAGGAAAAGTAA+TGG | + | chr8.2:35511899-35511918 | MS.gene008993:intron | 30.0% | |
| GTATTTGACCCAAATTTCTT+CGG | - | chr8.2:35513381-35513400 | None:intergenic | 30.0% | |
| TATTTGACCCAAATTTCTTC+GGG | - | chr8.2:35513380-35513399 | None:intergenic | 30.0% | |
| TCATTTAGGAAAAGTAATGG+TGG | + | chr8.2:35511902-35511921 | MS.gene008993:intron | 30.0% | |
| TGATTATCAATCACCTGTTA+TGG | + | chr8.2:35514369-35514388 | MS.gene008993:intron | 30.0% | |
| TGGTTGAAAACTAATATGAC+AGG | - | chr8.2:35514554-35514573 | None:intergenic | 30.0% | |
| TGTATTATGGATGTAGACAT+GGG | + | chr8.2:35511345-35511364 | MS.gene008993:intron | 30.0% | |
| TGTTCATATGAGTATATGTC+AGG | + | chr8.2:35512310-35512329 | MS.gene008993:intron | 30.0% | |
| TTACCTTCTTATTGAGCTTA+CGG | - | chr8.2:35512983-35513002 | None:intergenic | 30.0% | |
| TTAGAAGTCCTTATACAACA+TGG | - | chr8.2:35512159-35512178 | None:intergenic | 30.0% | |
| TTAGCTAAACTGGATCATTT+AGG | + | chr8.2:35511888-35511907 | MS.gene008993:intron | 30.0% | |
| TTCTTGAATTGATGTCTGAT+GGG | + | chr8.2:35515009-35515028 | MS.gene008993:intron | 30.0% | |
| TTGTATTATGGATGTAGACA+TGG | + | chr8.2:35511344-35511363 | MS.gene008993:intron | 30.0% | |
| ! | AAATTGATTCTATGCCTTTG+TGG | + | chr8.2:35511480-35511499 | MS.gene008993:intron | 30.0% |
| ! | ATTTTCTGATTTACGTGATC+GGG | + | chr8.2:35510862-35510881 | MS.gene008993:intron | 30.0% |
| ! | CAAATCTAAATAGTCTTGCT+TGG | - | chr8.2:35514057-35514076 | None:intergenic | 30.0% |
| ! | CAAGTTGAAGTCTGAAAATA+AGG | + | chr8.2:35510755-35510774 | MS.gene008993:CDS | 30.0% |
| ! | CATCAATCGATTATCTTTTC+AGG | + | chr8.2:35514911-35514930 | MS.gene008993:CDS | 30.0% |
| ! | CATTTTCTGATTTACGTGAT+CGG | + | chr8.2:35510861-35510880 | MS.gene008993:intron | 30.0% |
| ! | CTACATAACAAAAGGCATAT+AGG | - | chr8.2:35512555-35512574 | None:intergenic | 30.0% |
| ! | GGGATTTTCTTGAATTGAAA+CGG | + | chr8.2:35511167-35511186 | MS.gene008993:intron | 30.0% |
| ! | TTTTCTTTAAGCAACATGGT+TGG | + | chr8.2:35512649-35512668 | MS.gene008993:CDS | 30.0% |
| !! | AATCGTATTCTTTTGATTGC+TGG | + | chr8.2:35514416-35514435 | MS.gene008993:intron | 30.0% |
| !! | GTTGTGGGTTTTGTAATTAT+TGG | + | chr8.2:35511380-35511399 | MS.gene008993:intron | 30.0% |
| !!! | ACCATGGTTTATTTTTGTAG+AGG | - | chr8.2:35513947-35513966 | None:intergenic | 30.0% |
| !!! | CTCATTATTTTTAGTTGCTC+AGG | - | chr8.2:35512603-35512622 | None:intergenic | 30.0% |
| !!! | GGGTTTCAATTTTTTGTTGT+GGG | + | chr8.2:35511365-35511384 | MS.gene008993:intron | 30.0% |
| !!! | GTGTTCATATTAGTTTTGTG+AGG | + | chr8.2:35511041-35511060 | MS.gene008993:CDS | 30.0% |
| !!! | TACTCTGATTTTAGCTAAAC+TGG | + | chr8.2:35511878-35511897 | MS.gene008993:intron | 30.0% |
| !!! | TGGGTTTCAATTTTTTGTTG+TGG | + | chr8.2:35511364-35511383 | MS.gene008993:intron | 30.0% |
| !!! | TTTATTTTTGTAGAGGTGTC+CGG | - | chr8.2:35513940-35513959 | None:intergenic | 30.0% |
| AAAAGGTAGCATATCTGTGT+TGG | + | chr8.2:35511630-35511649 | MS.gene008993:intron | 35.0% | |
| AAAGGTAGCATATCTGTGTT+GGG | + | chr8.2:35511631-35511650 | MS.gene008993:intron | 35.0% | |
| AAATCCCTAATCACAAAGCA+TGG | - | chr8.2:35511154-35511173 | None:intergenic | 35.0% | |
| AATAGTTGAGCTCAGTAGAA+AGG | + | chr8.2:35513006-35513025 | MS.gene008993:intron | 35.0% | |
| AATGGTTTCCCGAAGAAATT+TGG | + | chr8.2:35513369-35513388 | MS.gene008993:CDS | 35.0% | |
| AATGTCTTTCCTGCCTTAAA+AGG | + | chr8.2:35511613-35511632 | MS.gene008993:intron | 35.0% | |
| AGCTAAAATCAGAGTAACTG+AGG | - | chr8.2:35511874-35511893 | None:intergenic | 35.0% | |
| AGTTGCACTATACAAAACAG+AGG | - | chr8.2:35513436-35513455 | None:intergenic | 35.0% | |
| ATCCAATATAGTCCCATAAC+AGG | - | chr8.2:35514385-35514404 | None:intergenic | 35.0% | |
| ATGGTTTCCCGAAGAAATTT+GGG | + | chr8.2:35513370-35513389 | MS.gene008993:CDS | 35.0% | |
| CAAATTCATCATGCAAAACG+TGG | + | chr8.2:35513554-35513573 | MS.gene008993:intron | 35.0% | |
| CAATACGAAGAATCCAACAT+GGG | + | chr8.2:35510958-35510977 | MS.gene008993:CDS | 35.0% | |
| CTATACAAAACAGAGGTTGA+TGG | - | chr8.2:35513429-35513448 | None:intergenic | 35.0% | |
| GAAGGAAGTAGCTAAAAGTA+TGG | + | chr8.2:35512740-35512759 | MS.gene008993:CDS | 35.0% | |
| GATCTACAAACTTAGACTCA+TGG | + | chr8.2:35512574-35512593 | MS.gene008993:intron | 35.0% | |
| GTTCTTGAATTGATGTCTGA+TGG | + | chr8.2:35515008-35515027 | MS.gene008993:intron | 35.0% | |
| TACCTTCTTATTGAGCTTAC+GGG | - | chr8.2:35512982-35513001 | None:intergenic | 35.0% | |
| TCAAAACGAGAAGTCATAGA+TGG | - | chr8.2:35513240-35513259 | None:intergenic | 35.0% | |
| TCAAACTTCTTTGCAGACTT+TGG | + | chr8.2:35513339-35513358 | MS.gene008993:CDS | 35.0% | |
| TTAGAACTCTGATAAGCAAC+AGG | - | chr8.2:35512792-35512811 | None:intergenic | 35.0% | |
| TTATGGTTCTTTAGCGACTA+GGG | + | chr8.2:35514616-35514635 | MS.gene008993:intron | 35.0% | |
| TTGCACTACAATCAATAGAG+AGG | + | chr8.2:35512489-35512508 | MS.gene008993:intron | 35.0% | |
| TTTATGGTTCTTTAGCGACT+AGG | + | chr8.2:35514615-35514634 | MS.gene008993:intron | 35.0% | |
| ! | AAAAGTATGGCTGAAGAGAA+AGG | + | chr8.2:35512753-35512772 | MS.gene008993:CDS | 35.0% |
| ! | ATTCAAGAAGCACAACAACA+TGG | - | chr8.2:35512134-35512153 | None:intergenic | 35.0% |
| ! | CAATATCAAGGTGTCTTACA+TGG | + | chr8.2:35513818-35513837 | MS.gene008993:intron | 35.0% |
| ! | CACAGATATGCTACCTTTTA+AGG | - | chr8.2:35511629-35511648 | None:intergenic | 35.0% |
| ! | GCAAAGAAGTTTGATGACTT+CGG | - | chr8.2:35513333-35513352 | None:intergenic | 35.0% |
| ! | GTGGTCAGCTTAAACAATTT+TGG | + | chr8.2:35513466-35513485 | MS.gene008993:intron | 35.0% |
| ! | GTTGCTTATCAGAGTTCTAA+TGG | + | chr8.2:35512792-35512811 | MS.gene008993:CDS | 35.0% |
| ! | TAGTCACTCTTGTTACTTCA+GGG | + | chr8.2:35514813-35514832 | MS.gene008993:intron | 35.0% |
| ! | TGCTTCTATTTTACCACCAT+CGG | - | chr8.2:35512676-35512695 | None:intergenic | 35.0% |
| !! | AAAGTGTTGTGTAACAACCA+TGG | - | chr8.2:35513963-35513982 | None:intergenic | 35.0% |
| !! | GACTTCTCGTTTTGAATATG+TGG | + | chr8.2:35513245-35513264 | MS.gene008993:CDS | 35.0% |
| !!! | CTGCGTCTTTGTTTTATACT+TGG | + | chr8.2:35512453-35512472 | MS.gene008993:intron | 35.0% |
| AAAAAAATCCGCACTGGAGA+TGG | - | chr8.2:35514847-35514866 | None:intergenic | 40.0% | |
| AAGATCAATGGAGGAATCTC+CGG | - | chr8.2:35514877-35514896 | None:intergenic | 40.0% | |
| AAGGTAGCATATCTGTGTTG+GGG | + | chr8.2:35511632-35511651 | MS.gene008993:intron | 40.0% | |
| AATCAGGATTGGGAGGAAAA+GGG | - | chr8.2:35515044-35515063 | None:intergenic | 40.0% | |
| AGAGCCATGCTTTGTGATTA+GGG | + | chr8.2:35511147-35511166 | MS.gene008993:intron | 40.0% | |
| ATAGTCGATGGAATTGGACT+CGG | + | chr8.2:35511206-35511225 | MS.gene008993:intron | 40.0% | |
| ATTCATCATGCAAAACGTGG+TGG | + | chr8.2:35513557-35513576 | MS.gene008993:intron | 40.0% | |
| CACCTGTTATGGGACTATAT+TGG | + | chr8.2:35514380-35514399 | MS.gene008993:intron | 40.0% | |
| CAGCAATCATCTTTCAATCC+TGG | - | chr8.2:35512047-35512066 | None:intergenic | 40.0% | |
| CTCTCCTGCAATGTTCTTAA+GGG | - | chr8.2:35515095-35515114 | None:intergenic | 40.0% | |
| GAGTAACTGAGGACAAAGTA+TGG | - | chr8.2:35511863-35511882 | None:intergenic | 40.0% | |
| GCAATACGAAGAATCCAACA+TGG | + | chr8.2:35510957-35510976 | MS.gene008993:CDS | 40.0% | |
| GTATACTGGAACTGCCTATT+GGG | + | chr8.2:35513054-35513073 | MS.gene008993:intron | 40.0% | |
| GTTAGTGTTGTGTTGTGCAT+TGG | + | chr8.2:35511098-35511117 | MS.gene008993:intron | 40.0% | |
| GTTCCATAGAGACTAGGAAA+GGG | - | chr8.2:35514523-35514542 | None:intergenic | 40.0% | |
| TAGAGCCATGCTTTGTGATT+AGG | + | chr8.2:35511146-35511165 | MS.gene008993:intron | 40.0% | |
| TAGTGATTTCCCCGCATTAA+AGG | + | chr8.2:35511822-35511841 | MS.gene008993:intron | 40.0% | |
| TATCTTGATTGCATGTGCAG+AGG | + | chr8.2:35513779-35513798 | MS.gene008993:intron | 40.0% | |
| TATGGTTCTTTAGCGACTAG+GGG | + | chr8.2:35514617-35514636 | MS.gene008993:intron | 40.0% | |
| TCACTTGGCTACATTTGACA+AGG | - | chr8.2:35513141-35513160 | None:intergenic | 40.0% | |
| TCTCTCCTGCAATGTTCTTA+AGG | - | chr8.2:35515096-35515115 | None:intergenic | 40.0% | |
| TCTGAAGACGAGGTTCTTAT+CGG | - | chr8.2:35510730-35510749 | None:intergenic | 40.0% | |
| TCTTCCCTTAAGAACATTGC+AGG | + | chr8.2:35515088-35515107 | MS.gene008993:CDS | 40.0% | |
| TGAGGACAAAGTATGGAATC+CGG | - | chr8.2:35511856-35511875 | None:intergenic | 40.0% | |
| TGATAAGCAACAGGTGATGA+AGG | - | chr8.2:35512783-35512802 | None:intergenic | 40.0% | |
| TGTATACTGGAACTGCCTAT+TGG | + | chr8.2:35513053-35513072 | MS.gene008993:intron | 40.0% | |
| TTAGGAAAAGTAATGGTGGC+TGG | + | chr8.2:35511906-35511925 | MS.gene008993:intron | 40.0% | |
| TTCCATAGAGACTAGGAAAG+GGG | - | chr8.2:35514522-35514541 | None:intergenic | 40.0% | |
| TTCTAGGTTCCATAGAGACT+AGG | - | chr8.2:35514529-35514548 | None:intergenic | 40.0% | |
| TTGATTCTATGCCTTTGTGG+CGG | + | chr8.2:35511483-35511502 | MS.gene008993:intron | 40.0% | |
| ! | ACAATGTTGTTTGTCGTGGA+TGG | - | chr8.2:35513207-35513226 | None:intergenic | 40.0% |
| ! | AGACACAATGTTGTTTGTCG+TGG | - | chr8.2:35513211-35513230 | None:intergenic | 40.0% |
| ! | CTAGTCACTCTTGTTACTTC+AGG | + | chr8.2:35514812-35514831 | MS.gene008993:intron | 40.0% |
| ! | CTATTGGTGGTAAAAAGCCT+GGG | + | chr8.2:35512937-35512956 | MS.gene008993:CDS | 40.0% |
| ! | CTTCTTTGCAGACTTTGGAA+TGG | + | chr8.2:35513344-35513363 | MS.gene008993:CDS | 40.0% |
| ! | TCTATTGGTGGTAAAAAGCC+TGG | + | chr8.2:35512936-35512955 | MS.gene008993:CDS | 40.0% |
| !! | ACTTGAGTTTTCTGAAGACG+AGG | - | chr8.2:35510740-35510759 | None:intergenic | 40.0% |
| !! | GCAGACTTTGGAATGGATAA+TGG | + | chr8.2:35513351-35513370 | MS.gene008993:CDS | 40.0% |
| !! | GTGTCTTACATGGTTTTGCA+AGG | + | chr8.2:35513828-35513847 | MS.gene008993:intron | 40.0% |
| !! | TGGAAAGTGCTGACATCAAA+GGG | + | chr8.2:35513577-35513596 | MS.gene008993:intron | 40.0% |
| !!! | ATCTCCAGTGCGGATTTTTT+TGG | + | chr8.2:35514846-35514865 | MS.gene008993:CDS | 40.0% |
| !!! | GATATGCTACCTTTTAAGGC+AGG | - | chr8.2:35511625-35511644 | None:intergenic | 40.0% |
| !!! | TCTCCTTTTTTGCATGCGTT+GGG | + | chr8.2:35511454-35511473 | MS.gene008993:intron | 40.0% |
| AACACCGAGACTTCGATGAA+CGG | - | chr8.2:35511026-35511045 | None:intergenic | 45.0% | |
| AACCCCTTTCCTAGTCTCTA+TGG | + | chr8.2:35514517-35514536 | MS.gene008993:intron | 45.0% | |
| AAGAACATTGCAGGAGAGAC+TGG | + | chr8.2:35515097-35515116 | MS.gene008993:CDS | 45.0% | |
| AAGATCTGTCATCAAGGAGG+AGG | - | chr8.2:35515143-35515162 | None:intergenic | 45.0% | |
| ACGAGAAGTCATAGATGGTC+TGG | - | chr8.2:35513235-35513254 | None:intergenic | 45.0% | |
| ACTATTGTATGCGAGGCTCT+AGG | - | chr8.2:35512897-35512916 | None:intergenic | 45.0% | |
| AGAACATTGCAGGAGAGACT+GGG | + | chr8.2:35515098-35515117 | MS.gene008993:CDS | 45.0% | |
| AGGTAGCATATCTGTGTTGG+GGG | + | chr8.2:35511633-35511652 | MS.gene008993:intron | 45.0% | |
| AGTGCAACTTCTACTGCATG+TGG | + | chr8.2:35513447-35513466 | MS.gene008993:intron | 45.0% | |
| ATCAGGATTGGGAGGAAAAG+GGG | - | chr8.2:35515043-35515062 | None:intergenic | 45.0% | |
| ATCGCTAGCAGCAAGATCAA+TGG | - | chr8.2:35514889-35514908 | None:intergenic | 45.0% | |
| ATGGTTCTTTAGCGACTAGG+GGG | + | chr8.2:35514618-35514637 | MS.gene008993:intron | 45.0% | |
| CAACCCAACGCATGCAAAAA+AGG | - | chr8.2:35511460-35511479 | None:intergenic | 45.0% | |
| CAACGCATGCAAAAAAGGAG+AGG | - | chr8.2:35511455-35511474 | None:intergenic | 45.0% | |
| CAATCAGGATTGGGAGGAAA+AGG | - | chr8.2:35515045-35515064 | None:intergenic | 45.0% | |
| CCTGCAAAGCAATCAGGATT+GGG | - | chr8.2:35515054-35515073 | None:intergenic | 45.0% | |
| CTGAAGATCTGTCATCAAGG+AGG | - | chr8.2:35515146-35515165 | None:intergenic | 45.0% | |
| GGTTCCATAGAGACTAGGAA+AGG | - | chr8.2:35514524-35514543 | None:intergenic | 45.0% | |
| GTAAAAAGCCTGGGAAGAGT+GGG | + | chr8.2:35512946-35512965 | MS.gene008993:CDS | 45.0% | |
| GTACAGGCAAATTCTTGCGA+AGG | + | chr8.2:35512722-35512741 | MS.gene008993:CDS | 45.0% | |
| GTCACCAAAAAAATCCGCAC+TGG | - | chr8.2:35514853-35514872 | None:intergenic | 45.0% | |
| GTCCTGAAGATCTGTCATCA+AGG | - | chr8.2:35515149-35515168 | None:intergenic | 45.0% | |
| TAAAAAGCCTGGGAAGAGTG+GGG | + | chr8.2:35512947-35512966 | MS.gene008993:CDS | 45.0% | |
| TAATGTCCAGTCGTCTGAGT+TGG | + | chr8.2:35513269-35513288 | MS.gene008993:CDS | 45.0% | |
| TGATTCTATGCCTTTGTGGC+GGG | + | chr8.2:35511484-35511503 | MS.gene008993:intron | 45.0% | |
| TGATTGCATGTGCAGAGGTT+GGG | + | chr8.2:35513784-35513803 | MS.gene008993:intron | 45.0% | |
| TGCCCGTAAGCTCAATAAGA+AGG | + | chr8.2:35512977-35512996 | MS.gene008993:CDS | 45.0% | |
| TGCTCATAGAGAGACTCACT+TGG | - | chr8.2:35513156-35513175 | None:intergenic | 45.0% | |
| TGGGAAAAAACTCAGCTCCT+TGG | + | chr8.2:35515117-35515136 | MS.gene008993:CDS | 45.0% | |
| TTGATTGCATGTGCAGAGGT+TGG | + | chr8.2:35513783-35513802 | MS.gene008993:intron | 45.0% | |
| TTGTTTGTCGTGGATGGAAC+TGG | - | chr8.2:35513201-35513220 | None:intergenic | 45.0% | |
| TTTCCCCGCATTAAAGGTAG+CGG | + | chr8.2:35511828-35511847 | MS.gene008993:intron | 45.0% | |
| ! | AGGGCTTACTTGCACTTTTG+AGG | - | chr8.2:35513403-35513422 | None:intergenic | 45.0% |
| ! | CAGCATCTCTTGCTTTGTTC+TGG | - | chr8.2:35514262-35514281 | None:intergenic | 45.0% |
| ! | CTCCTTGATGACAGATCTTC+AGG | + | chr8.2:35515144-35515163 | MS.gene008993:CDS | 45.0% |
| ! | GGGGCACTCTTACATTATCA+AGG | + | chr8.2:35514637-35514656 | MS.gene008993:intron | 45.0% |
| !! | AAAACAGAGGTTGATGGCAG+AGG | - | chr8.2:35513423-35513442 | None:intergenic | 45.0% |
| !! | AAACAGAGGTTGATGGCAGA+GGG | - | chr8.2:35513422-35513441 | None:intergenic | 45.0% |
| !! | CAGAGTTCTAATGGACTTCC+TGG | + | chr8.2:35512801-35512820 | MS.gene008993:CDS | 45.0% |
| !! | GTGGAAAGTGCTGACATCAA+AGG | + | chr8.2:35513576-35513595 | MS.gene008993:intron | 45.0% |
| !!! | CTCTCCTTTTTTGCATGCGT+TGG | + | chr8.2:35511453-35511472 | MS.gene008993:intron | 45.0% |
| !!! | GCGGATTTTTTTGGTGACTC+CGG | + | chr8.2:35514855-35514874 | MS.gene008993:CDS | 45.0% |
| AAAAAGCCTGGGAAGAGTGG+GGG | + | chr8.2:35512948-35512967 | MS.gene008993:CDS | 50.0% | |
| AAGCAACATGGTTGGACCGA+TGG | + | chr8.2:35512657-35512676 | MS.gene008993:CDS | 50.0% | |
| ACATGGGCGTCAGTAACGTA+TGG | + | chr8.2:35510974-35510993 | MS.gene008993:CDS | 50.0% | |
| ACCTCATTGATCCTGACACC+AGG | - | chr8.2:35512822-35512841 | None:intergenic | 50.0% | |
| CCCAATCCTGATTGCTTTGC+AGG | + | chr8.2:35515051-35515070 | MS.gene008993:intron | 50.0% | |
| CGGATCCGCTACCTTTAATG+CGG | - | chr8.2:35511836-35511855 | None:intergenic | 50.0% | |
| CGGCAGAACAATCAATGCAG+AGG | - | chr8.2:35511006-35511025 | None:intergenic | 50.0% | |
| GATCCGCTACCTTTAATGCG+GGG | - | chr8.2:35511834-35511853 | None:intergenic | 50.0% | |
| GATTCTATGCCTTTGTGGCG+GGG | + | chr8.2:35511485-35511504 | MS.gene008993:intron | 50.0% | |
| GATTGCTTTGCAGGCACAAC+AGG | + | chr8.2:35515060-35515079 | MS.gene008993:intron | 50.0% | |
| GCAAAGCAATCAGGATTGGG+AGG | - | chr8.2:35515051-35515070 | None:intergenic | 50.0% | |
| GCCTGCAAAGCAATCAGGAT+TGG | - | chr8.2:35515055-35515074 | None:intergenic | 50.0% | |
| GCTAGCAGCAAGATCAATGG+AGG | - | chr8.2:35514886-35514905 | None:intergenic | 50.0% | |
| GGATCCGCTACCTTTAATGC+GGG | - | chr8.2:35511835-35511854 | None:intergenic | 50.0% | |
| GGTAAAAAGCCTGGGAAGAG+TGG | + | chr8.2:35512945-35512964 | MS.gene008993:CDS | 50.0% | |
| GGTAGCATATCTGTGTTGGG+GGG | + | chr8.2:35511634-35511653 | MS.gene008993:intron | 50.0% | |
| GTAGCATATCTGTGTTGGGG+GGG | + | chr8.2:35511635-35511654 | MS.gene008993:intron | 50.0% | |
| GTTGTGCCTGCAAAGCAATC+AGG | - | chr8.2:35515060-35515079 | None:intergenic | 50.0% | |
| TACGTTACTGACGCCCATGT+TGG | - | chr8.2:35510974-35510993 | None:intergenic | 50.0% | |
| TCTGCCGTTCATCGAAGTCT+CGG | + | chr8.2:35511019-35511038 | MS.gene008993:CDS | 50.0% | |
| ! | CAGTCGTCTGAGTTGGATTC+CGG | + | chr8.2:35513276-35513295 | MS.gene008993:CDS | 50.0% |
| ! | TCCTGGTGTCAGGATCAATG+AGG | + | chr8.2:35512818-35512837 | MS.gene008993:CDS | 50.0% |
| !! | CGCATTAAAGGTAGCGGATC+CGG | + | chr8.2:35511834-35511853 | MS.gene008993:intron | 50.0% |
| !! | CTAATGGACTTCCTGGTGTC+AGG | + | chr8.2:35512808-35512827 | MS.gene008993:CDS | 50.0% |
| ACTGGAGCAGGTGGTTCTTC+AGG | - | chr8.2:35513183-35513202 | None:intergenic | 55.0% | |
| CAACATGGTTGGACCGATGG+TGG | + | chr8.2:35512660-35512679 | MS.gene008993:CDS | 55.0% | |
| CATATCTGTGTTGGGGGGGA+TGG | + | chr8.2:35511639-35511658 | MS.gene008993:intron | 55.0% | |
| CCAGAGCTGCAGAGTTGTAC+AGG | + | chr8.2:35512706-35512725 | MS.gene008993:CDS | 55.0% | |
| CCTGTACAACTCTGCAGCTC+TGG | - | chr8.2:35512709-35512728 | None:intergenic | 55.0% | |
| CGGAATCCAACTCAGACGAC+TGG | - | chr8.2:35513278-35513297 | None:intergenic | 55.0% | |
| GTCGATGGAATTGGACTCGG+AGG | + | chr8.2:35511209-35511228 | MS.gene008993:intron | 55.0% | |
| TGTCATCAAGGAGGAGGCCA+AGG | - | chr8.2:35515137-35515156 | None:intergenic | 55.0% | |
| TTCGTCTGCCATCTCCAGTG+CGG | + | chr8.2:35514836-35514855 | MS.gene008993:CDS | 55.0% | |
| ! | TCGTCTGAGTTGGATTCCGG+AGG | + | chr8.2:35513279-35513298 | MS.gene008993:CDS | 55.0% |
| GTCGTGGATGGAACTGGAGC+AGG | - | chr8.2:35513195-35513214 | None:intergenic | 60.0% | |
| GTGGATGGAACTGGAGCAGG+TGG | - | chr8.2:35513192-35513211 | None:intergenic | 60.0% | |
| CCAAGTCCCCCACTCTTCCC+AGG | - | chr8.2:35512957-35512976 | None:intergenic | 65.0% | |
| CCTGGGAAGAGTGGGGGACT+TGG | + | chr8.2:35512954-35512973 | MS.gene008993:CDS | 65.0% | |
| CGGTGACTTCCCCGCCACAA+AGG | - | chr8.2:35511497-35511516 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 35510708 | 35515180 | 35510708 | ID=MS.gene008993 |
| chr8.2 | mRNA | 35510708 | 35515180 | 35510708 | ID=MS.gene008993.t1;Parent=MS.gene008993 |
| chr8.2 | exon | 35510708 | 35510776 | 35510708 | ID=MS.gene008993.t1.exon1;Parent=MS.gene008993.t1 |
| chr8.2 | CDS | 35510708 | 35510776 | 35510708 | ID=cds.MS.gene008993.t1;Parent=MS.gene008993.t1 |
| chr8.2 | exon | 35510944 | 35511062 | 35510944 | ID=MS.gene008993.t1.exon2;Parent=MS.gene008993.t1 |
| chr8.2 | CDS | 35510944 | 35511062 | 35510944 | ID=cds.MS.gene008993.t1;Parent=MS.gene008993.t1 |
| chr8.2 | exon | 35512575 | 35512998 | 35512575 | ID=MS.gene008993.t1.exon3;Parent=MS.gene008993.t1 |
| chr8.2 | CDS | 35512575 | 35512998 | 35512575 | ID=cds.MS.gene008993.t1;Parent=MS.gene008993.t1 |
| chr8.2 | exon | 35513153 | 35513413 | 35513153 | ID=MS.gene008993.t1.exon4;Parent=MS.gene008993.t1 |
| chr8.2 | CDS | 35513153 | 35513413 | 35513153 | ID=cds.MS.gene008993.t1;Parent=MS.gene008993.t1 |
| chr8.2 | exon | 35514185 | 35514310 | 35514185 | ID=MS.gene008993.t1.exon5;Parent=MS.gene008993.t1 |
| chr8.2 | CDS | 35514185 | 35514310 | 35514185 | ID=cds.MS.gene008993.t1;Parent=MS.gene008993.t1 |
| chr8.2 | exon | 35514834 | 35514932 | 35514834 | ID=MS.gene008993.t1.exon6;Parent=MS.gene008993.t1 |
| chr8.2 | CDS | 35514834 | 35514932 | 35514834 | ID=cds.MS.gene008993.t1;Parent=MS.gene008993.t1 |
| chr8.2 | exon | 35515073 | 35515180 | 35515073 | ID=MS.gene008993.t1.exon7;Parent=MS.gene008993.t1 |
| chr8.2 | CDS | 35515073 | 35515180 | 35515073 | ID=cds.MS.gene008993.t1;Parent=MS.gene008993.t1 |
| Gene Sequence |
| Protein sequence |
