Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65987.t1 | XP_013446059.1 | 96.3 | 401 | 15 | 0 | 1 | 401 | 1 | 401 | 3.30E-184 | 654.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65987.t1 | Q8H100 | 68.4 | 412 | 115 | 6 | 2 | 401 | 5 | 413 | 1.4e-122 | 441.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65987.t1 | G7LHQ6 | 96.3 | 401 | 15 | 0 | 1 | 401 | 1 | 401 | 2.4e-184 | 654.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene65987 | MS.gene048437 | PPI |
| MS.gene66388 | MS.gene65987 | PPI |
| MS.gene65987 | MS.gene75024 | PPI |
| MS.gene030337 | MS.gene65987 | PPI |
| MS.gene008993 | MS.gene65987 | PPI |
| MS.gene048438 | MS.gene65987 | PPI |
| MS.gene049051 | MS.gene65987 | PPI |
| MS.gene008994 | MS.gene65987 | PPI |
| MS.gene65986 | MS.gene65987 | PPI |
| MS.gene20137 | MS.gene65987 | PPI |
| MS.gene71181 | MS.gene65987 | PPI |
| MS.gene038430 | MS.gene65987 | PPI |
| MS.gene063343 | MS.gene65987 | PPI |
| MS.gene049052 | MS.gene65987 | PPI |
| MS.gene65987 | MS.gene015841 | PPI |
| MS.gene65987 | MS.gene05967 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65987.t1 | MTR_8g067090 | 96.010 | 401 | 16 | 0 | 1 | 401 | 1 | 401 | 0.0 | 781 |
| MS.gene65987.t1 | MTR_8g471120 | 96.010 | 401 | 16 | 0 | 1 | 401 | 1 | 401 | 0.0 | 781 |
| MS.gene65987.t1 | MTR_8g067080 | 77.670 | 412 | 78 | 7 | 1 | 401 | 1 | 409 | 0.0 | 608 |
| MS.gene65987.t1 | MTR_8g471110 | 77.670 | 412 | 78 | 7 | 1 | 401 | 1 | 409 | 0.0 | 608 |
| MS.gene65987.t1 | MTR_8g067080 | 77.427 | 412 | 77 | 8 | 1 | 401 | 1 | 407 | 0.0 | 599 |
| MS.gene65987.t1 | MTR_7g099830 | 42.537 | 134 | 72 | 1 | 13 | 146 | 7 | 135 | 3.32e-31 | 124 |
| MS.gene65987.t1 | MTR_1g069000 | 40.000 | 145 | 76 | 3 | 13 | 151 | 7 | 146 | 4.09e-28 | 115 |
| MS.gene65987.t1 | MTR_8g464390 | 37.500 | 176 | 81 | 6 | 16 | 164 | 23 | 196 | 4.14e-24 | 103 |
| MS.gene65987.t1 | MTR_6g080710 | 43.077 | 130 | 64 | 3 | 16 | 136 | 23 | 151 | 3.12e-23 | 98.6 |
| MS.gene65987.t1 | MTR_2g080950 | 53.947 | 76 | 34 | 1 | 16 | 91 | 23 | 97 | 5.88e-22 | 97.8 |
| MS.gene65987.t1 | MTR_3g017500 | 54.688 | 64 | 28 | 1 | 22 | 84 | 33 | 96 | 7.51e-18 | 84.7 |
| MS.gene65987.t1 | MTR_3g017500 | 54.688 | 64 | 28 | 1 | 22 | 84 | 63 | 126 | 1.65e-17 | 84.0 |
| MS.gene65987.t1 | MTR_2g030230 | 38.614 | 101 | 57 | 3 | 13 | 109 | 21 | 120 | 3.06e-17 | 82.4 |
| MS.gene65987.t1 | MTR_8g088320 | 38.614 | 101 | 57 | 4 | 13 | 109 | 12 | 111 | 1.27e-16 | 80.5 |
| MS.gene65987.t1 | MTR_8g038400 | 50.000 | 64 | 31 | 1 | 22 | 84 | 29 | 92 | 5.16e-16 | 79.3 |
| MS.gene65987.t1 | MTR_4g074170 | 34.646 | 127 | 73 | 4 | 22 | 138 | 491 | 617 | 2.30e-14 | 75.5 |
| MS.gene65987.t1 | MTR_7g020860 | 47.761 | 67 | 33 | 1 | 22 | 86 | 514 | 580 | 1.31e-13 | 73.2 |
| MS.gene65987.t1 | MTR_7g020860 | 47.761 | 67 | 33 | 1 | 22 | 86 | 514 | 580 | 1.32e-13 | 72.8 |
| MS.gene65987.t1 | MTR_8g100100 | 46.753 | 77 | 36 | 2 | 12 | 86 | 499 | 572 | 1.33e-12 | 70.1 |
| MS.gene65987.t1 | MTR_8g100100 | 46.753 | 77 | 36 | 2 | 12 | 86 | 505 | 578 | 1.41e-12 | 69.7 |
| MS.gene65987.t1 | MTR_3g098680 | 45.946 | 74 | 35 | 2 | 12 | 83 | 502 | 572 | 8.13e-12 | 67.4 |
| MS.gene65987.t1 | MTR_8g464390 | 32.877 | 146 | 70 | 5 | 46 | 164 | 1 | 145 | 2.18e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65987.t1 | AT4G17890 | 67.476 | 412 | 119 | 6 | 2 | 401 | 5 | 413 | 0.0 | 530 |
| MS.gene65987.t1 | AT5G46750 | 63.415 | 410 | 133 | 7 | 1 | 401 | 1 | 402 | 4.12e-176 | 497 |
| MS.gene65987.t1 | AT4G17890 | 67.018 | 379 | 110 | 6 | 2 | 368 | 5 | 380 | 4.64e-170 | 481 |
| MS.gene65987.t1 | AT2G35210 | 62.406 | 399 | 137 | 8 | 1 | 392 | 1 | 393 | 7.29e-157 | 447 |
| MS.gene65987.t1 | AT2G35210 | 60.117 | 341 | 124 | 7 | 1 | 335 | 1 | 335 | 8.85e-127 | 370 |
| MS.gene65987.t1 | AT3G53710 | 45.865 | 133 | 67 | 1 | 13 | 145 | 7 | 134 | 3.07e-33 | 129 |
| MS.gene65987.t1 | AT3G53710 | 45.865 | 133 | 67 | 1 | 13 | 145 | 7 | 134 | 3.07e-33 | 129 |
| MS.gene65987.t1 | AT3G53710 | 45.865 | 133 | 67 | 1 | 13 | 145 | 7 | 134 | 3.07e-33 | 129 |
| MS.gene65987.t1 | AT2G37550 | 45.038 | 131 | 67 | 1 | 13 | 143 | 7 | 132 | 6.63e-33 | 129 |
| MS.gene65987.t1 | AT2G37550 | 45.038 | 131 | 67 | 1 | 13 | 143 | 7 | 132 | 6.63e-33 | 129 |
| MS.gene65987.t1 | AT5G54310 | 33.684 | 190 | 95 | 5 | 12 | 170 | 18 | 207 | 5.32e-23 | 100 |
| MS.gene65987.t1 | AT3G17660 | 46.250 | 80 | 43 | 0 | 12 | 91 | 18 | 97 | 8.32e-22 | 92.4 |
| MS.gene65987.t1 | AT3G17660 | 46.250 | 80 | 43 | 0 | 12 | 91 | 18 | 97 | 1.80e-21 | 92.8 |
| MS.gene65987.t1 | AT3G17660 | 46.250 | 80 | 43 | 0 | 12 | 91 | 18 | 97 | 7.85e-21 | 91.3 |
| MS.gene65987.t1 | AT3G07940 | 49.315 | 73 | 36 | 1 | 13 | 84 | 50 | 122 | 4.12e-18 | 84.0 |
| MS.gene65987.t1 | AT3G07940 | 49.315 | 73 | 36 | 1 | 13 | 84 | 50 | 122 | 8.85e-18 | 84.7 |
| MS.gene65987.t1 | AT4G21160 | 42.500 | 80 | 45 | 1 | 13 | 91 | 18 | 97 | 1.63e-17 | 83.6 |
| MS.gene65987.t1 | AT4G21160 | 42.500 | 80 | 45 | 1 | 13 | 91 | 18 | 97 | 1.63e-17 | 83.6 |
| MS.gene65987.t1 | AT4G21160 | 42.500 | 80 | 45 | 1 | 13 | 91 | 18 | 97 | 1.63e-17 | 83.6 |
| MS.gene65987.t1 | AT4G21160 | 42.500 | 80 | 45 | 1 | 13 | 91 | 18 | 97 | 1.63e-17 | 83.6 |
| MS.gene65987.t1 | AT4G05330 | 41.250 | 80 | 46 | 1 | 13 | 91 | 18 | 97 | 1.17e-16 | 80.9 |
| MS.gene65987.t1 | AT4G05330 | 41.250 | 80 | 46 | 1 | 13 | 91 | 18 | 97 | 1.17e-16 | 80.9 |
| MS.gene65987.t1 | AT4G16220 | 58.824 | 68 | 22 | 2 | 64 | 128 | 121 | 185 | 9.25e-15 | 73.9 |
| MS.gene65987.t1 | AT1G60860 | 50.000 | 64 | 30 | 1 | 22 | 83 | 479 | 542 | 3.45e-14 | 75.1 |
| MS.gene65987.t1 | AT1G60860 | 50.000 | 64 | 30 | 1 | 22 | 83 | 368 | 431 | 3.57e-14 | 74.7 |
| MS.gene65987.t1 | AT1G60860 | 50.000 | 64 | 30 | 1 | 22 | 83 | 308 | 371 | 4.84e-14 | 74.3 |
| MS.gene65987.t1 | AT5G13300 | 43.836 | 73 | 39 | 1 | 22 | 92 | 513 | 585 | 5.27e-14 | 74.3 |
| MS.gene65987.t1 | AT1G10870 | 51.562 | 64 | 29 | 1 | 22 | 83 | 479 | 542 | 8.21e-14 | 73.9 |
| MS.gene65987.t1 | AT1G10870 | 51.562 | 64 | 29 | 1 | 22 | 83 | 479 | 542 | 8.61e-14 | 73.6 |
| MS.gene65987.t1 | AT5G61980 | 48.438 | 64 | 31 | 1 | 22 | 83 | 510 | 573 | 9.17e-14 | 73.6 |
| MS.gene65987.t1 | AT3G17660 | 53.061 | 49 | 23 | 0 | 12 | 60 | 18 | 66 | 1.14e-12 | 67.4 |
Find 70 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTGGTTTCCCGAAGAAATT+TGG | 0.187342 | 8.1:+37415969 | MS.gene65987:CDS |
| CAGCATCTCTTGCTTTGTTC+TGG | 0.224885 | 8.1:-37416876 | None:intergenic |
| ACTGGAGCAGGTGGTTCTTC+AGG | 0.274169 | 8.1:-37415780 | None:intergenic |
| GCAAAGAAGTTTGATGATTT+CGG | 0.297104 | 8.1:-37415930 | None:intergenic |
| CAAGTTGAAGTCTGAAAATA+AGG | 0.314511 | 8.1:+37413658 | MS.gene65987:CDS |
| CTCCTTGATGACAGATCTTC+AGG | 0.319205 | 8.1:+37417782 | MS.gene65987:CDS |
| GTTGCTTATCAGAGTTCTAA+TGG | 0.323772 | 8.1:+37415392 | MS.gene65987:CDS |
| CAGAGTTCTAATGGACTTCC+TGG | 0.334434 | 8.1:+37415401 | MS.gene65987:CDS |
| TCAAACTTCTTTGCAGACTT+TGG | 0.340193 | 8.1:+37415939 | MS.gene65987:CDS |
| TCTCTCCTGCAATGTTCTTA+AGG | 0.357125 | 8.1:-37417731 | None:intergenic |
| CCTGTACAACTCTGCAGCTC+TGG | 0.358193 | 8.1:-37415306 | None:intergenic |
| CAGTCGTCTGAGTTGGATTC+CGG | 0.360915 | 8.1:+37415876 | MS.gene65987:CDS |
| AATAATTTGAAGAAGTCTAT+TGG | 0.365206 | 8.1:+37415521 | MS.gene65987:CDS |
| TCTGAAGACGAGGTTCTTAT+CGG | 0.372274 | 8.1:-37413630 | None:intergenic |
| TCTTCCCTTAAGAACATTGC+AGG | 0.374215 | 8.1:+37417726 | MS.gene65987:CDS |
| AAGAACATTGCAGGAGAGAC+TGG | 0.375056 | 8.1:+37417735 | MS.gene65987:CDS |
| TTATTTGACCCAAATTTCTT+CGG | 0.382452 | 8.1:-37415978 | None:intergenic |
| TTACCTTCTTATTGAGCTTA+CGG | 0.385740 | 8.1:-37415580 | None:intergenic |
| CTCTCCTGCAATGTTCTTAA+GGG | 0.388884 | 8.1:-37417730 | None:intergenic |
| TATTTGACCCAAATTTCTTC+GGG | 0.392303 | 8.1:-37415977 | None:intergenic |
| TACCTTCTTATTGAGCTTAC+GGG | 0.406262 | 8.1:-37415579 | None:intergenic |
| GCAGACTTTGGAATGGATAG+TGG | 0.415776 | 8.1:+37415951 | MS.gene65987:CDS |
| GTGGTTTCCCGAAGAAATTT+GGG | 0.427027 | 8.1:+37415970 | MS.gene65987:CDS |
| TTGTTTGTCGTGGATGGAAC+TGG | 0.430685 | 8.1:-37415798 | None:intergenic |
| CTAATGGACTTCCTGGTGTC+AGG | 0.438196 | 8.1:+37415408 | MS.gene65987:CDS |
| ATTGAATGTATTTGAACCTC+CGG | 0.459068 | 8.1:-37415895 | None:intergenic |
| GAAGGAAGTAGCTAAAAGTA+TGG | 0.460701 | 8.1:+37415340 | MS.gene65987:CDS |
| CCAGAGCTGCAGAGTTGTAC+AGG | 0.466381 | 8.1:+37415306 | MS.gene65987:CDS |
| ACGAGAAGTCATAGATGGTC+TGG | 0.473294 | 8.1:-37415832 | None:intergenic |
| TTAGAACTCTGATAAGCAAC+AGG | 0.481375 | 8.1:-37415389 | None:intergenic |
| CTTCTTTGCAGACTTTGGAA+TGG | 0.490698 | 8.1:+37415944 | MS.gene65987:CDS |
| TCAAAACGAGAAGTCATAGA+TGG | 0.514014 | 8.1:-37415837 | None:intergenic |
| ATCGCTAGCAGCAAGATCAA+TGG | 0.517560 | 8.1:-37417503 | None:intergenic |
| ACATGGGCGTCAGTAACGTA+TGG | 0.518284 | 8.1:+37413870 | MS.gene65987:CDS |
| AAAAGTATGGCTGAAGAGAA+AGG | 0.520493 | 8.1:+37415353 | MS.gene65987:CDS |
| TGATAAGCAACAGGTGATGA+AGG | 0.530089 | 8.1:-37415380 | None:intergenic |
| GATCTACAAACTTAGACTCA+TGG | 0.530785 | 8.1:+37415174 | MS.gene65987:intron |
| AAGCAACATGGTTGGACCGA+TGG | 0.531171 | 8.1:+37415257 | MS.gene65987:CDS |
| AAGATCAATGGAGGAATCTC+CGG | 0.531888 | 8.1:-37417491 | None:intergenic |
| ACATTGTTGTTTGTCGTGGA+TGG | 0.534249 | 8.1:-37415804 | None:intergenic |
| CGGAATCCAACTCAGACGAC+TGG | 0.539405 | 8.1:-37415875 | None:intergenic |
| TGTCATCAAGGAGGAGGCCA+AGG | 0.539734 | 8.1:-37417772 | None:intergenic |
| TCTGCCGTTCATCGAAGTCT+CGG | 0.549396 | 8.1:+37413915 | MS.gene65987:CDS |
| GTCGTGGATGGAACTGGAGC+AGG | 0.550054 | 8.1:-37415792 | None:intergenic |
| ACTATTGTATGCGAGGCTCT+AGG | 0.552723 | 8.1:-37415494 | None:intergenic |
| TACGTTACTGACGCCCATGT+TGG | 0.552830 | 8.1:-37413867 | None:intergenic |
| TAATGTCCAGTCGTCTGAGT+TGG | 0.557059 | 8.1:+37415869 | MS.gene65987:CDS |
| AAGATCTGTCATCAAGGAGG+AGG | 0.586831 | 8.1:-37417778 | None:intergenic |
| AGACACATTGTTGTTTGTCG+TGG | 0.586871 | 8.1:-37415808 | None:intergenic |
| TGCCCGTAAGCTCAATAAGA+AGG | 0.587772 | 8.1:+37415577 | MS.gene65987:CDS |
| ATTTGATACTATTGTATGCG+AGG | 0.588190 | 8.1:-37415501 | None:intergenic |
| GTACAGGCAAATTCTTGCGA+AGG | 0.591745 | 8.1:+37415322 | MS.gene65987:CDS |
| AGAACATTGCAGGAGAGACT+GGG | 0.594396 | 8.1:+37417736 | MS.gene65987:CDS |
| AAAAGAAAACACATTAGAGA+AGG | 0.594618 | 8.1:+37415445 | MS.gene65987:CDS |
| CAACATGGTTGGACCGATGG+TGG | 0.600620 | 8.1:+37415260 | MS.gene65987:CDS |
| CATGGGCGTCAGTAACGTAT+GGG | 0.603242 | 8.1:+37413871 | MS.gene65987:CDS |
| AATTTGAAGAAGTCTATTGG+TGG | 0.609978 | 8.1:+37415524 | MS.gene65987:CDS |
| TCGTCTGAGTTGGATTCCGG+AGG | 0.612556 | 8.1:+37415879 | MS.gene65987:CDS |
| GTCCTGAAGATCTGTCATCA+AGG | 0.612922 | 8.1:-37417784 | None:intergenic |
| ACCTCATTGATCCTGACACC+AGG | 0.614869 | 8.1:-37415419 | None:intergenic |
| TGCTCATAGAGAGACTCACT+TGG | 0.640748 | 8.1:-37415753 | None:intergenic |
| AACACCGAGACTTCGATGAA+CGG | 0.641366 | 8.1:-37413919 | None:intergenic |
| CGGCAGAACAATCAATGCAG+AGG | 0.642639 | 8.1:-37413899 | None:intergenic |
| GCAATACGAAGAATCCAACA+TGG | 0.667289 | 8.1:+37413853 | MS.gene65987:CDS |
| GCTAGCAGCAAGATCAATGG+AGG | 0.673995 | 8.1:-37417500 | None:intergenic |
| GTGGATGGAACTGGAGCAGG+TGG | 0.679612 | 8.1:-37415789 | None:intergenic |
| TTCGTCTGCCATCTCCAGTG+CGG | 0.684569 | 8.1:+37417453 | MS.gene65987:CDS |
| CAATACGAAGAATCCAACAT+GGG | 0.708002 | 8.1:+37413854 | MS.gene65987:CDS |
| CTGAAGATCTGTCATCAAGG+AGG | 0.712381 | 8.1:-37417781 | None:intergenic |
| TCCTGGTGTCAGGATCAATG+AGG | 0.723936 | 8.1:+37415418 | MS.gene65987:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATAAAATATGTAATGA+TGG | + | chr8.1:37414189-37414208 | MS.gene65987:intron | 10.0% |
| !! | TATTATTTGATATGAAAATT+AGG | + | chr8.1:37417316-37417335 | MS.gene65987:intron | 10.0% |
| !! | AAATACAAAAATAATCCAAT+AGG | - | chr8.1:37415671-37415690 | None:intergenic | 15.0% |
| !! | ATAATAACAATATTAAGGTA+TGG | + | chr8.1:37416412-37416431 | MS.gene65987:intron | 15.0% |
| !! | TAATGTCACATTAAAATTTA+GGG | - | chr8.1:37416281-37416300 | None:intergenic | 15.0% |
| !! | TTAATGTCACATTAAAATTT+AGG | - | chr8.1:37416282-37416301 | None:intergenic | 15.0% |
| !! | TTCTTATTGAAAAATCTTAT+AGG | + | chr8.1:37417372-37417391 | MS.gene65987:intron | 15.0% |
| !!! | ATAATTTTCCTTAAGAAATT+TGG | - | chr8.1:37417299-37417318 | None:intergenic | 15.0% |
| !!! | TTTCCTTAATTAATTTTACT+AGG | + | chr8.1:37414953-37414972 | MS.gene65987:intron | 15.0% |
| !!! | TTTCTTTTGATTTTTTATCT+TGG | + | chr8.1:37413702-37413721 | MS.gene65987:intron | 15.0% |
| !!! | TTTTTCTTTCAAAAATTTGT+CGG | + | chr8.1:37416254-37416273 | MS.gene65987:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTGGATCA+TGG | - | chr8.1:37416595-37416614 | None:intergenic | 15.0% |
| !! | AATAATTTGAAGAAGTCTAT+TGG | + | chr8.1:37415521-37415540 | MS.gene65987:CDS | 20.0% |
| !! | ACAACCATAAAATTAATTCA+GGG | - | chr8.1:37416313-37416332 | None:intergenic | 20.0% |
| !! | ACTAATATAATTGGCATTTA+TGG | + | chr8.1:37417216-37417235 | MS.gene65987:intron | 20.0% |
| !! | CGAAAAATGACTAATATAAT+TGG | + | chr8.1:37417207-37417226 | MS.gene65987:intron | 20.0% |
| !! | GTGCTATAATAACAATATTA+AGG | + | chr8.1:37416407-37416426 | MS.gene65987:intron | 20.0% |
| !! | TAAAAAATACACTAAACTCA+CGG | - | chr8.1:37414414-37414433 | None:intergenic | 20.0% |
| !! | TACAACCATAAAATTAATTC+AGG | - | chr8.1:37416314-37416333 | None:intergenic | 20.0% |
| !! | TATAAAATATGTAATGATGG+TGG | + | chr8.1:37414192-37414211 | MS.gene65987:intron | 20.0% |
| !! | TCAAAGGGTTATATAATAAA+AGG | + | chr8.1:37416192-37416211 | MS.gene65987:intron | 20.0% |
| !! | TGAAATCATTGAAAAATTCT+AGG | + | chr8.1:37416498-37416517 | MS.gene65987:intron | 20.0% |
| !! | TGTATAAATATCAAACTGAA+CGG | - | chr8.1:37414572-37414591 | None:intergenic | 20.0% |
| !! | TTAATCTAGAAAGATTTGAT+TGG | + | chr8.1:37414992-37415011 | MS.gene65987:intron | 20.0% |
| !!! | AATTTCTTAGAGATGAATTT+TGG | - | chr8.1:37417084-37417103 | None:intergenic | 20.0% |
| !!! | ATCTCTAAGAAATTTTTTCA+TGG | + | chr8.1:37417090-37417109 | MS.gene65987:intron | 20.0% |
| !!! | ATGTAGTTTTTGTTTGAAAA+GGG | + | chr8.1:37414142-37414161 | MS.gene65987:intron | 20.0% |
| !!! | ATTTCTTAGAGATGAATTTT+GGG | - | chr8.1:37417083-37417102 | None:intergenic | 20.0% |
| !!! | ATTTTATGAGAAAGATGAAA+GGG | + | chr8.1:37414437-37414456 | MS.gene65987:intron | 20.0% |
| !!! | ATTTTCTGATTTATGTTATC+GGG | + | chr8.1:37413765-37413784 | MS.gene65987:intron | 20.0% |
| !!! | CAACTAAAAATAATGAGTTT+TGG | + | chr8.1:37415206-37415225 | MS.gene65987:CDS | 20.0% |
| !!! | CATTTTCTGATTTATGTTAT+CGG | + | chr8.1:37413764-37413783 | MS.gene65987:intron | 20.0% |
| !!! | TAGAAGATATGTTTTAACAA+AGG | + | chr8.1:37416353-37416372 | MS.gene65987:intron | 20.0% |
| !!! | TAGTGCATTAATTTGTATTA+TGG | + | chr8.1:37414229-37414248 | MS.gene65987:intron | 20.0% |
| !!! | TATGTAGTTTTTGTTTGAAA+AGG | + | chr8.1:37414141-37414160 | MS.gene65987:intron | 20.0% |
| !!! | TATTTTATGAGAAAGATGAA+AGG | + | chr8.1:37414436-37414455 | MS.gene65987:intron | 20.0% |
| !!! | TGTCTTTTTTTTTTGTATAC+TGG | + | chr8.1:37415640-37415659 | MS.gene65987:intron | 20.0% |
| ! | AAAAGAAAACACATTAGAGA+AGG | + | chr8.1:37415445-37415464 | MS.gene65987:CDS | 25.0% |
| ! | ATAAATAAGTGCATGACAAA+AGG | - | chr8.1:37416758-37416777 | None:intergenic | 25.0% |
| ! | ATTTGACACCAAATTTCTTA+AGG | + | chr8.1:37417288-37417307 | MS.gene65987:intron | 25.0% |
| ! | CAAAATTTCACTCAATTAAG+AGG | + | chr8.1:37414866-37414885 | MS.gene65987:intron | 25.0% |
| ! | CAGCCTAGTAAAATTAATTA+AGG | - | chr8.1:37414959-37414978 | None:intergenic | 25.0% |
| ! | CTATACAAAACAAAGGTTAA+TGG | - | chr8.1:37416029-37416048 | None:intergenic | 25.0% |
| ! | GCAGTAAAATACTATAAGAA+AGG | - | chr8.1:37416939-37416958 | None:intergenic | 25.0% |
| ! | GTTTCTATATCAATAACGAA+AGG | - | chr8.1:37417558-37417577 | None:intergenic | 25.0% |
| ! | TTAATTGAGAAAAGAAACTG+AGG | - | chr8.1:37415018-37415037 | None:intergenic | 25.0% |
| ! | TTATTGATATAGAAACGTCA+TGG | + | chr8.1:37417562-37417581 | MS.gene65987:intron | 25.0% |
| ! | TTATTTGACCCAAATTTCTT+CGG | - | chr8.1:37415981-37416000 | None:intergenic | 25.0% |
| ! | TTCGAGATTATTGTATTTAG+TGG | - | chr8.1:37417191-37417210 | None:intergenic | 25.0% |
| ! | TTGATAGAATAGAATGAAGA+AGG | + | chr8.1:37415114-37415133 | MS.gene65987:intron | 25.0% |
| ! | TTGTAGATCTACATAACAAA+AGG | - | chr8.1:37415163-37415182 | None:intergenic | 25.0% |
| !! | ATCTTGTTATAACTTTGAAC+TGG | - | chr8.1:37416133-37416152 | None:intergenic | 25.0% |
| !! | ATTTCGTCATCTCAATTTTT+CGG | + | chr8.1:37416850-37416869 | MS.gene65987:CDS | 25.0% |
| !! | CAAATTTTCTTTAAGCAACA+TGG | + | chr8.1:37415245-37415264 | MS.gene65987:CDS | 25.0% |
| !! | CTTAATTAATTTTACTAGGC+TGG | + | chr8.1:37414957-37414976 | MS.gene65987:intron | 25.0% |
| !! | GGTAAAATGATTTTGTGATT+AGG | + | chr8.1:37414163-37414182 | MS.gene65987:intron | 25.0% |
| !! | TACAAAGAAAATTAGCTCTT+TGG | - | chr8.1:37417344-37417363 | None:intergenic | 25.0% |
| !! | TTTCTTAGAGATGAATTTTG+GGG | - | chr8.1:37417082-37417101 | None:intergenic | 25.0% |
| !! | TTTTGTCATGTATAAGATTG+AGG | + | chr8.1:37416786-37416805 | MS.gene65987:intron | 25.0% |
| !!! | AATTTGATTTGAATACTCGA+TGG | + | chr8.1:37414091-37414110 | MS.gene65987:intron | 25.0% |
| !!! | ATTTATTTTCAGAGTAACTG+AGG | - | chr8.1:37414802-37414821 | None:intergenic | 25.0% |
| !!! | CTAAAAATAATGAGTTTTGG+AGG | + | chr8.1:37415209-37415228 | MS.gene65987:CDS | 25.0% |
| !!! | TAAAACATATCTTCTAGCTT+TGG | - | chr8.1:37416349-37416368 | None:intergenic | 25.0% |
| !!! | TCTAGCTTTGGTAATTAAAT+TGG | - | chr8.1:37416337-37416356 | None:intergenic | 25.0% |
| !!! | TGTGTTGTGATGATTTTTTT+TGG | + | chr8.1:37413811-37413830 | MS.gene65987:intron | 25.0% |
| AAAACAAAGGTTAATGGCAT+AGG | - | chr8.1:37416023-37416042 | None:intergenic | 30.0% | |
| AAACAAACTTAAGACTCAAC+CGG | + | chr8.1:37416526-37416545 | MS.gene65987:intron | 30.0% | |
| AAACAAAGGTTAATGGCATA+GGG | - | chr8.1:37416022-37416041 | None:intergenic | 30.0% | |
| AATTTGAAGAAGTCTATTGG+TGG | + | chr8.1:37415524-37415543 | MS.gene65987:CDS | 30.0% | |
| ACCATAAAATTAATTCAGGG+AGG | - | chr8.1:37416310-37416329 | None:intergenic | 30.0% | |
| ACTAATATGACAGGTATTCT+AGG | - | chr8.1:37417162-37417181 | None:intergenic | 30.0% | |
| AGTTGCACTATACAAAACAA+AGG | - | chr8.1:37416036-37416055 | None:intergenic | 30.0% | |
| ATAGACAAGATGAGATAAAG+AGG | + | chr8.1:37414465-37414484 | MS.gene65987:intron | 30.0% | |
| ATTGAATGTATTTGAACCTC+CGG | - | chr8.1:37415898-37415917 | None:intergenic | 30.0% | |
| ATTTGAATACTCGATGGAAT+TGG | + | chr8.1:37414097-37414116 | MS.gene65987:intron | 30.0% | |
| ATTTGATACTATTGTATGCG+AGG | - | chr8.1:37415504-37415523 | None:intergenic | 30.0% | |
| CTTTCATATGAGTATATGTC+CGG | + | chr8.1:37414910-37414929 | MS.gene65987:intron | 30.0% | |
| TAAGAAGGTAAGCAAATAGT+TGG | + | chr8.1:37415592-37415611 | MS.gene65987:intron | 30.0% | |
| TATTTGACCCAAATTTCTTC+GGG | - | chr8.1:37415980-37415999 | None:intergenic | 30.0% | |
| TGGTTGAAAACTAATATGAC+AGG | - | chr8.1:37417171-37417190 | None:intergenic | 30.0% | |
| TGTATTATGGATGTAGACAT+GGG | + | chr8.1:37414242-37414261 | MS.gene65987:intron | 30.0% | |
| TTACCTTCTTATTGAGCTTA+CGG | - | chr8.1:37415583-37415602 | None:intergenic | 30.0% | |
| TTCTTGAATTGATGTCTGAT+GGG | + | chr8.1:37417626-37417645 | MS.gene65987:intron | 30.0% | |
| TTGTATTATGGATGTAGACA+TGG | + | chr8.1:37414241-37414260 | MS.gene65987:intron | 30.0% | |
| ! | AAATTGATTCTATGCCTTTG+TGG | + | chr8.1:37414377-37414396 | MS.gene65987:intron | 30.0% |
| ! | ACCTCCCTGAATTAATTTTA+TGG | + | chr8.1:37416306-37416325 | MS.gene65987:intron | 30.0% |
| ! | CAAATCTAAATAGTCTTGCT+TGG | - | chr8.1:37416668-37416687 | None:intergenic | 30.0% |
| ! | CAAGTTGAAGTCTGAAAATA+AGG | + | chr8.1:37413658-37413677 | MS.gene65987:CDS | 30.0% |
| ! | CATCAATCGATTATCTTTTC+AGG | + | chr8.1:37417528-37417547 | MS.gene65987:CDS | 30.0% |
| ! | GCAAAGAAGTTTGATGATTT+CGG | - | chr8.1:37415933-37415952 | None:intergenic | 30.0% |
| ! | GGGATTTTCTTGAATTGAAA+CGG | + | chr8.1:37414064-37414083 | MS.gene65987:intron | 30.0% |
| ! | TTTTCTTTAAGCAACATGGT+TGG | + | chr8.1:37415249-37415268 | MS.gene65987:CDS | 30.0% |
| !! | AATCGTATTCTTTTGATTGC+TGG | + | chr8.1:37417033-37417052 | MS.gene65987:intron | 30.0% |
| !! | GTTGTGGGTTTTGTAATTAT+TGG | + | chr8.1:37414277-37414296 | MS.gene65987:intron | 30.0% |
| !!! | CTCATTATTTTTAGTTGCTC+AGG | - | chr8.1:37415203-37415222 | None:intergenic | 30.0% |
| !!! | GGGTTTCAATTTTTTGTTGT+GGG | + | chr8.1:37414262-37414281 | MS.gene65987:intron | 30.0% |
| !!! | GTGTTCATATTAGTTTTGTG+AGG | + | chr8.1:37413937-37413956 | MS.gene65987:CDS | 30.0% |
| !!! | TGGGTTTCAATTTTTTGTTG+TGG | + | chr8.1:37414261-37414280 | MS.gene65987:intron | 30.0% |
| AAAAGGTAGCATATCTGTGT+TGG | + | chr8.1:37414527-37414546 | MS.gene65987:intron | 35.0% | |
| AAAGGTAGCATATCTGTGTT+GGG | + | chr8.1:37414528-37414547 | MS.gene65987:intron | 35.0% | |
| ACCTCTACAAAAATCAACCA+TGG | + | chr8.1:37416551-37416570 | MS.gene65987:intron | 35.0% | |
| AGAGCAATGCTTTGTGATTA+GGG | + | chr8.1:37414044-37414063 | MS.gene65987:intron | 35.0% | |
| ATCCAATATAGTCCCATAAC+AGG | - | chr8.1:37417002-37417021 | None:intergenic | 35.0% | |
| CAAATCCATCATGCAAAACA+TGG | + | chr8.1:37416154-37416173 | MS.gene65987:intron | 35.0% | |
| CAATACGAAGAATCCAACAT+GGG | + | chr8.1:37413854-37413873 | MS.gene65987:CDS | 35.0% | |
| GAAGGAAGTAGCTAAAAGTA+TGG | + | chr8.1:37415340-37415359 | MS.gene65987:CDS | 35.0% | |
| GATCTACAAACTTAGACTCA+TGG | + | chr8.1:37415174-37415193 | MS.gene65987:intron | 35.0% | |
| GATTATCAATCCCCTGTTAT+GGG | + | chr8.1:37416987-37417006 | MS.gene65987:intron | 35.0% | |
| GTGCATGACAAAAGGAAAAA+AGG | - | chr8.1:37416750-37416769 | None:intergenic | 35.0% | |
| GTTCTTGAATTGATGTCTGA+TGG | + | chr8.1:37417625-37417644 | MS.gene65987:intron | 35.0% | |
| TACCTTCTTATTGAGCTTAC+GGG | - | chr8.1:37415582-37415601 | None:intergenic | 35.0% | |
| TAGAGCAATGCTTTGTGATT+AGG | + | chr8.1:37414043-37414062 | MS.gene65987:intron | 35.0% | |
| TCAAAACGAGAAGTCATAGA+TGG | - | chr8.1:37415840-37415859 | None:intergenic | 35.0% | |
| TCAAACTTCTTTGCAGACTT+TGG | + | chr8.1:37415939-37415958 | MS.gene65987:CDS | 35.0% | |
| TCCAATATAGTCCCATAACA+GGG | - | chr8.1:37417001-37417020 | None:intergenic | 35.0% | |
| TGATTATCAATCCCCTGTTA+TGG | + | chr8.1:37416986-37417005 | MS.gene65987:intron | 35.0% | |
| TTAGAACTCTGATAAGCAAC+AGG | - | chr8.1:37415392-37415411 | None:intergenic | 35.0% | |
| TTATGGTTCTTTAGCGACTA+GGG | + | chr8.1:37417233-37417252 | MS.gene65987:intron | 35.0% | |
| TTGCACTACAATCAATAGAG+AGG | + | chr8.1:37415089-37415108 | MS.gene65987:intron | 35.0% | |
| TTTATGGTTCTTTAGCGACT+AGG | + | chr8.1:37417232-37417251 | MS.gene65987:intron | 35.0% | |
| ! | AAAAGTATGGCTGAAGAGAA+AGG | + | chr8.1:37415353-37415372 | MS.gene65987:CDS | 35.0% |
| ! | AAATAGTTGGCTCAGTAGAA+AGG | + | chr8.1:37415605-37415624 | MS.gene65987:intron | 35.0% |
| ! | ATAGTCACTCTTGTTACTTC+AGG | + | chr8.1:37417429-37417448 | MS.gene65987:intron | 35.0% |
| ! | CACAGATATGCTACCTTTTA+CGG | - | chr8.1:37414526-37414545 | None:intergenic | 35.0% |
| ! | CTACATAACAAAAGGCGTAT+AGG | - | chr8.1:37415155-37415174 | None:intergenic | 35.0% |
| ! | GTGGTCAGCTTAAACAATTT+TGG | + | chr8.1:37416066-37416085 | MS.gene65987:intron | 35.0% |
| ! | GTTGCTTATCAGAGTTCTAA+TGG | + | chr8.1:37415392-37415411 | MS.gene65987:CDS | 35.0% |
| ! | TAGTCACTCTTGTTACTTCA+GGG | + | chr8.1:37417430-37417449 | MS.gene65987:intron | 35.0% |
| ! | TGCTTCTATTTTACCACCAT+CGG | - | chr8.1:37415276-37415295 | None:intergenic | 35.0% |
| !! | AAAGTGTTGTGTAACAACCA+TGG | - | chr8.1:37416571-37416590 | None:intergenic | 35.0% |
| !! | ACCATGGTTGATTTTTGTAG+AGG | - | chr8.1:37416555-37416574 | None:intergenic | 35.0% |
| !! | GACTTCTCGTTTTGAATATG+TGG | + | chr8.1:37415845-37415864 | MS.gene65987:CDS | 35.0% |
| !! | TGTCTTACATGGTTTTGCAA+GGG | + | chr8.1:37416437-37416456 | MS.gene65987:intron | 35.0% |
| !!! | CTGCGTCTTTGTTTTATACT+TGG | + | chr8.1:37415053-37415072 | MS.gene65987:intron | 35.0% |
| !!! | TTGATTTTTGTAGAGGTGTC+CGG | - | chr8.1:37416548-37416567 | None:intergenic | 35.0% |
| AAAAAAATCCGCACTGGAGA+TGG | - | chr8.1:37417464-37417483 | None:intergenic | 40.0% | |
| AAGATCAATGGAGGAATCTC+CGG | - | chr8.1:37417494-37417513 | None:intergenic | 40.0% | |
| AAGGTAGCATATCTGTGTTG+GGG | + | chr8.1:37414529-37414548 | MS.gene65987:intron | 40.0% | |
| AAGGTATGGTCTGTCTTACA+TGG | + | chr8.1:37416426-37416445 | MS.gene65987:intron | 40.0% | |
| AATCAGGATTGGGAGGAAAA+GGG | - | chr8.1:37417661-37417680 | None:intergenic | 40.0% | |
| AATCTTGATTGCATGTGCAG+AGG | + | chr8.1:37416380-37416399 | MS.gene65987:intron | 40.0% | |
| AATGTCTTTCCTGCCGTAAA+AGG | + | chr8.1:37414510-37414529 | MS.gene65987:intron | 40.0% | |
| AGTGGTTTCCCGAAGAAATT+TGG | + | chr8.1:37415969-37415988 | MS.gene65987:CDS | 40.0% | |
| ATACTCGATGGAATTGGACT+CGG | + | chr8.1:37414103-37414122 | MS.gene65987:intron | 40.0% | |
| ATCCATCATGCAAAACATGG+TGG | + | chr8.1:37416157-37416176 | MS.gene65987:intron | 40.0% | |
| CCAATATAGTCCCATAACAG+GGG | - | chr8.1:37417000-37417019 | None:intergenic | 40.0% | |
| CCTGCAAAACAATCAGGATT+GGG | - | chr8.1:37417692-37417711 | None:intergenic | 40.0% | |
| CTCTCCTGCAATGTTCTTAA+GGG | - | chr8.1:37417733-37417752 | None:intergenic | 40.0% | |
| GAGTAACTGAGGACAAAGTA+TGG | - | chr8.1:37414791-37414810 | None:intergenic | 40.0% | |
| GCAATACGAAGAATCCAACA+TGG | + | chr8.1:37413853-37413872 | MS.gene65987:CDS | 40.0% | |
| GGAGCAAAACAATCAGGATT+GGG | - | chr8.1:37417671-37417690 | None:intergenic | 40.0% | |
| GTGGTTTCCCGAAGAAATTT+GGG | + | chr8.1:37415970-37415989 | MS.gene65987:CDS | 40.0% | |
| GTTAGTGTTGTGTTGTGCAT+TGG | + | chr8.1:37413995-37414014 | MS.gene65987:intron | 40.0% | |
| GTTCCATAGAGACTAGGAAA+GGG | - | chr8.1:37417140-37417159 | None:intergenic | 40.0% | |
| TAGTGATTTCCCCGCATTAA+AGG | + | chr8.1:37414750-37414769 | MS.gene65987:intron | 40.0% | |
| TATGGTTCTTTAGCGACTAG+GGG | + | chr8.1:37417234-37417253 | MS.gene65987:intron | 40.0% | |
| TCACTTGGCTACATTTGACA+AGG | - | chr8.1:37415741-37415760 | None:intergenic | 40.0% | |
| TCTCTCCTGCAATGTTCTTA+AGG | - | chr8.1:37417734-37417753 | None:intergenic | 40.0% | |
| TCTGAAGACGAGGTTCTTAT+CGG | - | chr8.1:37413633-37413652 | None:intergenic | 40.0% | |
| TCTTCCCTTAAGAACATTGC+AGG | + | chr8.1:37417726-37417745 | MS.gene65987:CDS | 40.0% | |
| TGAGGACAAAGTATGGAATC+CGG | - | chr8.1:37414784-37414803 | None:intergenic | 40.0% | |
| TGATAAGCAACAGGTGATGA+AGG | - | chr8.1:37415383-37415402 | None:intergenic | 40.0% | |
| TGTATACTGGAACTGCCTAT+TGG | + | chr8.1:37415653-37415672 | MS.gene65987:intron | 40.0% | |
| TTCCATAGAGACTAGGAAAG+GGG | - | chr8.1:37417139-37417158 | None:intergenic | 40.0% | |
| TTCTAGGTTCCATAGAGACT+AGG | - | chr8.1:37417146-37417165 | None:intergenic | 40.0% | |
| ! | CTATTGGTGGTAAAAAGCCT+GGG | + | chr8.1:37415537-37415556 | MS.gene65987:CDS | 40.0% |
| ! | CTTCTTTGCAGACTTTGGAA+TGG | + | chr8.1:37415944-37415963 | MS.gene65987:CDS | 40.0% |
| ! | GAAGCATGCTCAATGTTTTC+CGG | - | chr8.1:37414932-37414951 | None:intergenic | 40.0% |
| ! | TCTATTGGTGGTAAAAAGCC+TGG | + | chr8.1:37415536-37415555 | MS.gene65987:CDS | 40.0% |
| ! | TTCCACCATGTTTTGCATGA+TGG | - | chr8.1:37416162-37416181 | None:intergenic | 40.0% |
| !! | ACATTGTTGTTTGTCGTGGA+TGG | - | chr8.1:37415807-37415826 | None:intergenic | 40.0% |
| !! | ACTTGAGTTTTCTGAAGACG+AGG | - | chr8.1:37413643-37413662 | None:intergenic | 40.0% |
| !! | AGACACATTGTTGTTTGTCG+TGG | - | chr8.1:37415811-37415830 | None:intergenic | 40.0% |
| !! | CTGTCTTACATGGTTTTGCA+AGG | + | chr8.1:37416436-37416455 | MS.gene65987:intron | 40.0% |
| !! | GTCTTACATGGTTTTGCAAG+GGG | + | chr8.1:37416438-37416457 | MS.gene65987:intron | 40.0% |
| !! | TGGAAAGTGCTGACATCAAA+GGG | + | chr8.1:37416177-37416196 | MS.gene65987:intron | 40.0% |
| !!! | ATCTCCAGTGCGGATTTTTT+TGG | + | chr8.1:37417463-37417482 | MS.gene65987:CDS | 40.0% |
| !!! | TCTCCTTTTTTGCATGCGTT+GGG | + | chr8.1:37414351-37414370 | MS.gene65987:intron | 40.0% |
| AACACCGAGACTTCGATGAA+CGG | - | chr8.1:37413922-37413941 | None:intergenic | 45.0% | |
| AACCCCTTTCCTAGTCTCTA+TGG | + | chr8.1:37417134-37417153 | MS.gene65987:intron | 45.0% | |
| AAGAACATTGCAGGAGAGAC+TGG | + | chr8.1:37417735-37417754 | MS.gene65987:CDS | 45.0% | |
| AAGATCTGTCATCAAGGAGG+AGG | - | chr8.1:37417781-37417800 | None:intergenic | 45.0% | |
| ACGAGAAGTCATAGATGGTC+TGG | - | chr8.1:37415835-37415854 | None:intergenic | 45.0% | |
| ACTATTGTATGCGAGGCTCT+AGG | - | chr8.1:37415497-37415516 | None:intergenic | 45.0% | |
| AGAACATTGCAGGAGAGACT+GGG | + | chr8.1:37417736-37417755 | MS.gene65987:CDS | 45.0% | |
| AGGTAGCATATCTGTGTTGG+GGG | + | chr8.1:37414530-37414549 | MS.gene65987:intron | 45.0% | |
| ATCAGGATTGGGAGGAAAAG+GGG | - | chr8.1:37417660-37417679 | None:intergenic | 45.0% | |
| ATCGCTAGCAGCAAGATCAA+TGG | - | chr8.1:37417506-37417525 | None:intergenic | 45.0% | |
| ATGGTTCTTTAGCGACTAGG+GGG | + | chr8.1:37417235-37417254 | MS.gene65987:intron | 45.0% | |
| CAACCCAACGCATGCAAAAA+AGG | - | chr8.1:37414357-37414376 | None:intergenic | 45.0% | |
| CAACGCATGCAAAAAAGGAG+AGG | - | chr8.1:37414352-37414371 | None:intergenic | 45.0% | |
| CAATCAGGATTGGGAGGAAA+AGG | - | chr8.1:37417662-37417681 | None:intergenic | 45.0% | |
| CCCCTGTTATGGGACTATAT+TGG | + | chr8.1:37416997-37417016 | MS.gene65987:intron | 45.0% | |
| CTGAAGATCTGTCATCAAGG+AGG | - | chr8.1:37417784-37417803 | None:intergenic | 45.0% | |
| GCAAAACAATCAGGATTGGG+AGG | - | chr8.1:37417668-37417687 | None:intergenic | 45.0% | |
| GCCTGCAAAACAATCAGGAT+TGG | - | chr8.1:37417693-37417712 | None:intergenic | 45.0% | |
| GGATTGGGAGCAAAACAATC+AGG | - | chr8.1:37417677-37417696 | None:intergenic | 45.0% | |
| GGGAGCAAAACAATCAGGAT+TGG | - | chr8.1:37417672-37417691 | None:intergenic | 45.0% | |
| GGTTCCATAGAGACTAGGAA+AGG | - | chr8.1:37417141-37417160 | None:intergenic | 45.0% | |
| GTAAAAAGCCTGGGAAGAGT+GGG | + | chr8.1:37415546-37415565 | MS.gene65987:CDS | 45.0% | |
| GTACAGGCAAATTCTTGCGA+AGG | + | chr8.1:37415322-37415341 | MS.gene65987:CDS | 45.0% | |
| GTCACCAAAAAAATCCGCAC+TGG | - | chr8.1:37417470-37417489 | None:intergenic | 45.0% | |
| GTCCTGAAGATCTGTCATCA+AGG | - | chr8.1:37417787-37417806 | None:intergenic | 45.0% | |
| GTTGTGCCTGCAAAACAATC+AGG | - | chr8.1:37417698-37417717 | None:intergenic | 45.0% | |
| TAAAAAGCCTGGGAAGAGTG+GGG | + | chr8.1:37415547-37415566 | MS.gene65987:CDS | 45.0% | |
| TAATGTCCAGTCGTCTGAGT+TGG | + | chr8.1:37415869-37415888 | MS.gene65987:CDS | 45.0% | |
| TGATTGCATGTGCAGAGGTT+GGG | + | chr8.1:37416385-37416404 | MS.gene65987:intron | 45.0% | |
| TGCCCGTAAGCTCAATAAGA+AGG | + | chr8.1:37415577-37415596 | MS.gene65987:CDS | 45.0% | |
| TGCTCATAGAGAGACTCACT+TGG | - | chr8.1:37415756-37415775 | None:intergenic | 45.0% | |
| TGGGAAAAAACTCAGCTCCT+TGG | + | chr8.1:37417755-37417774 | MS.gene65987:CDS | 45.0% | |
| TTGATTGCATGTGCAGAGGT+TGG | + | chr8.1:37416384-37416403 | MS.gene65987:intron | 45.0% | |
| TTGTTTGTCGTGGATGGAAC+TGG | - | chr8.1:37415801-37415820 | None:intergenic | 45.0% | |
| TTTCCCCGCATTAAAGGTAG+CGG | + | chr8.1:37414756-37414775 | MS.gene65987:intron | 45.0% | |
| ! | CAGCATCTCTTGCTTTGTTC+TGG | - | chr8.1:37416879-37416898 | None:intergenic | 45.0% |
| ! | CTCCTTGATGACAGATCTTC+AGG | + | chr8.1:37417782-37417801 | MS.gene65987:CDS | 45.0% |
| ! | GATATGCTACCTTTTACGGC+AGG | - | chr8.1:37414522-37414541 | None:intergenic | 45.0% |
| ! | GGGGCACTCTTACATTATCA+AGG | + | chr8.1:37417254-37417273 | MS.gene65987:intron | 45.0% |
| !! | CAGAGTTCTAATGGACTTCC+TGG | + | chr8.1:37415401-37415420 | MS.gene65987:CDS | 45.0% |
| !! | CCCAATCCTGATTGTTTTGC+AGG | + | chr8.1:37417668-37417687 | MS.gene65987:intron | 45.0% |
| !! | GATTGTTTTGCAGGCACAAC+AGG | + | chr8.1:37417698-37417717 | MS.gene65987:intron | 45.0% |
| !! | GCAGACTTTGGAATGGATAG+TGG | + | chr8.1:37415951-37415970 | MS.gene65987:CDS | 45.0% |
| !! | GTGGAAAGTGCTGACATCAA+AGG | + | chr8.1:37416176-37416195 | MS.gene65987:intron | 45.0% |
| !!! | CTCTCCTTTTTTGCATGCGT+TGG | + | chr8.1:37414350-37414369 | MS.gene65987:intron | 45.0% |
| !!! | GCGGATTTTTTTGGTGACTC+CGG | + | chr8.1:37417472-37417491 | MS.gene65987:CDS | 45.0% |
| !! | AAAAAAAAAAAAAAAAGATA+TGG | + | chr8.1:37416602-37416621 | MS.gene65987:intron | 5.0% |
| !!! | TATCTTTTTTTTTTTTTTTT+TGG | - | chr8.1:37416602-37416621 | None:intergenic | 5.0% |
| AAAAAGCCTGGGAAGAGTGG+GGG | + | chr8.1:37415548-37415567 | MS.gene65987:CDS | 50.0% | |
| AAGCAACATGGTTGGACCGA+TGG | + | chr8.1:37415257-37415276 | MS.gene65987:CDS | 50.0% | |
| ACATGGGCGTCAGTAACGTA+TGG | + | chr8.1:37413870-37413889 | MS.gene65987:CDS | 50.0% | |
| ACCTCATTGATCCTGACACC+AGG | - | chr8.1:37415422-37415441 | None:intergenic | 50.0% | |
| AGTGCAACTTCTACTGCACG+TGG | + | chr8.1:37416047-37416066 | MS.gene65987:intron | 50.0% | |
| CATGGGCGTCAGTAACGTAT+GGG | + | chr8.1:37413871-37413890 | MS.gene65987:CDS | 50.0% | |
| CGGATCCGCTACCTTTAATG+CGG | - | chr8.1:37414764-37414783 | None:intergenic | 50.0% | |
| CGGCAGAACAATCAATGCAG+AGG | - | chr8.1:37413902-37413921 | None:intergenic | 50.0% | |
| GATCCGCTACCTTTAATGCG+GGG | - | chr8.1:37414762-37414781 | None:intergenic | 50.0% | |
| GATTCTATGCCTTTGTGGCG+AGG | + | chr8.1:37414382-37414401 | MS.gene65987:intron | 50.0% | |
| GCTAGCAGCAAGATCAATGG+AGG | - | chr8.1:37417503-37417522 | None:intergenic | 50.0% | |
| GGATCCGCTACCTTTAATGC+GGG | - | chr8.1:37414763-37414782 | None:intergenic | 50.0% | |
| GGTAAAAAGCCTGGGAAGAG+TGG | + | chr8.1:37415545-37415564 | MS.gene65987:CDS | 50.0% | |
| GGTAGCATATCTGTGTTGGG+GGG | + | chr8.1:37414531-37414550 | MS.gene65987:intron | 50.0% | |
| TACGTTACTGACGCCCATGT+TGG | - | chr8.1:37413870-37413889 | None:intergenic | 50.0% | |
| TCTGCCGTTCATCGAAGTCT+CGG | + | chr8.1:37413915-37413934 | MS.gene65987:CDS | 50.0% | |
| ! | CAGTCGTCTGAGTTGGATTC+CGG | + | chr8.1:37415876-37415895 | MS.gene65987:CDS | 50.0% |
| ! | TCCTGGTGTCAGGATCAATG+AGG | + | chr8.1:37415418-37415437 | MS.gene65987:CDS | 50.0% |
| !! | CGCATTAAAGGTAGCGGATC+CGG | + | chr8.1:37414762-37414781 | MS.gene65987:intron | 50.0% |
| !! | CTAATGGACTTCCTGGTGTC+AGG | + | chr8.1:37415408-37415427 | MS.gene65987:CDS | 50.0% |
| ACTGGAGCAGGTGGTTCTTC+AGG | - | chr8.1:37415783-37415802 | None:intergenic | 55.0% | |
| CAACATGGTTGGACCGATGG+TGG | + | chr8.1:37415260-37415279 | MS.gene65987:CDS | 55.0% | |
| CCAGAGCTGCAGAGTTGTAC+AGG | + | chr8.1:37415306-37415325 | MS.gene65987:CDS | 55.0% | |
| CCTGTACAACTCTGCAGCTC+TGG | - | chr8.1:37415309-37415328 | None:intergenic | 55.0% | |
| CGGAATCCAACTCAGACGAC+TGG | - | chr8.1:37415878-37415897 | None:intergenic | 55.0% | |
| CTCGATGGAATTGGACTCGG+AGG | + | chr8.1:37414106-37414125 | MS.gene65987:intron | 55.0% | |
| GCATATCTGTGTTGGGGGGA+TGG | + | chr8.1:37414535-37414554 | MS.gene65987:intron | 55.0% | |
| TGTCATCAAGGAGGAGGCCA+AGG | - | chr8.1:37417775-37417794 | None:intergenic | 55.0% | |
| TTCGTCTGCCATCTCCAGTG+CGG | + | chr8.1:37417453-37417472 | MS.gene65987:CDS | 55.0% | |
| ! | TCGTCTGAGTTGGATTCCGG+AGG | + | chr8.1:37415879-37415898 | MS.gene65987:CDS | 55.0% |
| CGGTGACTTCCTCGCCACAA+AGG | - | chr8.1:37414394-37414413 | None:intergenic | 60.0% | |
| GTCGTGGATGGAACTGGAGC+AGG | - | chr8.1:37415795-37415814 | None:intergenic | 60.0% | |
| GTGGATGGAACTGGAGCAGG+TGG | - | chr8.1:37415792-37415811 | None:intergenic | 60.0% | |
| CCAAGTCCCCCACTCTTCCC+AGG | - | chr8.1:37415557-37415576 | None:intergenic | 65.0% | |
| CCTGGGAAGAGTGGGGGACT+TGG | + | chr8.1:37415554-37415573 | MS.gene65987:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 37413611 | 37417818 | 37413611 | ID=MS.gene65987 |
| chr8.1 | mRNA | 37413611 | 37417818 | 37413611 | ID=MS.gene65987.t1;Parent=MS.gene65987 |
| chr8.1 | exon | 37413611 | 37413679 | 37413611 | ID=MS.gene65987.t1.exon1;Parent=MS.gene65987.t1 |
| chr8.1 | CDS | 37413611 | 37413679 | 37413611 | ID=cds.MS.gene65987.t1;Parent=MS.gene65987.t1 |
| chr8.1 | exon | 37413840 | 37413958 | 37413840 | ID=MS.gene65987.t1.exon2;Parent=MS.gene65987.t1 |
| chr8.1 | CDS | 37413840 | 37413958 | 37413840 | ID=cds.MS.gene65987.t1;Parent=MS.gene65987.t1 |
| chr8.1 | exon | 37415175 | 37415598 | 37415175 | ID=MS.gene65987.t1.exon3;Parent=MS.gene65987.t1 |
| chr8.1 | CDS | 37415175 | 37415598 | 37415175 | ID=cds.MS.gene65987.t1;Parent=MS.gene65987.t1 |
| chr8.1 | exon | 37415753 | 37416013 | 37415753 | ID=MS.gene65987.t1.exon4;Parent=MS.gene65987.t1 |
| chr8.1 | CDS | 37415753 | 37416013 | 37415753 | ID=cds.MS.gene65987.t1;Parent=MS.gene65987.t1 |
| chr8.1 | exon | 37416802 | 37416927 | 37416802 | ID=MS.gene65987.t1.exon5;Parent=MS.gene65987.t1 |
| chr8.1 | CDS | 37416802 | 37416927 | 37416802 | ID=cds.MS.gene65987.t1;Parent=MS.gene65987.t1 |
| chr8.1 | exon | 37417451 | 37417549 | 37417451 | ID=MS.gene65987.t1.exon6;Parent=MS.gene65987.t1 |
| chr8.1 | CDS | 37417451 | 37417549 | 37417451 | ID=cds.MS.gene65987.t1;Parent=MS.gene65987.t1 |
| chr8.1 | exon | 37417711 | 37417818 | 37417711 | ID=MS.gene65987.t1.exon7;Parent=MS.gene65987.t1 |
| chr8.1 | CDS | 37417711 | 37417818 | 37417711 | ID=cds.MS.gene65987.t1;Parent=MS.gene65987.t1 |
| Gene Sequence |
| Protein sequence |
