Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038430.t1 | XP_013446059.1 | 96 | 401 | 16 | 0 | 1 | 401 | 1 | 401 | 5.60E-184 | 653.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038430.t1 | Q8H100 | 68.0 | 412 | 117 | 6 | 2 | 401 | 5 | 413 | 1.1e-122 | 441.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038430.t1 | G7LHQ6 | 96.0 | 401 | 16 | 0 | 1 | 401 | 1 | 401 | 4.1e-184 | 653.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene038430 | MS.gene063343 | PPI |
| MS.gene038430 | MS.gene008993 | PPI |
| MS.gene038430 | MS.gene65986 | PPI |
| MS.gene038430 | MS.gene048438 | PPI |
| MS.gene038430 | MS.gene75024 | PPI |
| MS.gene038430 | MS.gene008994 | PPI |
| MS.gene038430 | MS.gene048437 | PPI |
| MS.gene038430 | MS.gene030337 | PPI |
| MS.gene20137 | MS.gene038430 | PPI |
| MS.gene71181 | MS.gene038430 | PPI |
| MS.gene049052 | MS.gene038430 | PPI |
| MS.gene038430 | MS.gene05967 | PPI |
| MS.gene038430 | MS.gene65987 | PPI |
| MS.gene038430 | MS.gene66388 | PPI |
| MS.gene038430 | MS.gene049051 | PPI |
| MS.gene038430 | MS.gene015841 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038430.t1 | MTR_8g067090 | 95.511 | 401 | 18 | 0 | 1 | 401 | 1 | 401 | 0.0 | 728 |
| MS.gene038430.t1 | MTR_8g471120 | 95.511 | 401 | 18 | 0 | 1 | 401 | 1 | 401 | 0.0 | 728 |
| MS.gene038430.t1 | MTR_8g067080 | 77.670 | 412 | 78 | 7 | 1 | 401 | 1 | 409 | 0.0 | 604 |
| MS.gene038430.t1 | MTR_8g471110 | 77.670 | 412 | 78 | 7 | 1 | 401 | 1 | 409 | 0.0 | 604 |
| MS.gene038430.t1 | MTR_8g067080 | 77.427 | 412 | 77 | 8 | 1 | 401 | 1 | 407 | 0.0 | 597 |
| MS.gene038430.t1 | MTR_7g099830 | 41.791 | 134 | 73 | 1 | 13 | 146 | 7 | 135 | 1.13e-30 | 122 |
| MS.gene038430.t1 | MTR_1g069000 | 39.310 | 145 | 77 | 3 | 13 | 151 | 7 | 146 | 1.19e-27 | 114 |
| MS.gene038430.t1 | MTR_8g464390 | 38.068 | 176 | 80 | 6 | 16 | 164 | 23 | 196 | 1.58e-24 | 105 |
| MS.gene038430.t1 | MTR_6g080710 | 44.538 | 119 | 58 | 2 | 16 | 134 | 23 | 133 | 2.03e-23 | 99.0 |
| MS.gene038430.t1 | MTR_2g080950 | 35.185 | 162 | 87 | 5 | 16 | 169 | 23 | 174 | 5.02e-22 | 98.2 |
| MS.gene038430.t1 | MTR_3g017500 | 54.688 | 64 | 28 | 1 | 22 | 84 | 33 | 96 | 8.09e-18 | 84.7 |
| MS.gene038430.t1 | MTR_3g017500 | 54.688 | 64 | 28 | 1 | 22 | 84 | 63 | 126 | 1.67e-17 | 84.0 |
| MS.gene038430.t1 | MTR_2g030230 | 38.614 | 101 | 57 | 3 | 13 | 109 | 21 | 120 | 2.37e-17 | 82.8 |
| MS.gene038430.t1 | MTR_8g088320 | 38.614 | 101 | 57 | 4 | 13 | 109 | 12 | 111 | 1.15e-16 | 80.9 |
| MS.gene038430.t1 | MTR_8g038400 | 50.000 | 64 | 31 | 1 | 22 | 84 | 29 | 92 | 5.30e-16 | 79.3 |
| MS.gene038430.t1 | MTR_4g074170 | 35.433 | 127 | 72 | 4 | 22 | 138 | 491 | 617 | 1.02e-14 | 76.6 |
| MS.gene038430.t1 | MTR_7g020860 | 47.761 | 67 | 33 | 1 | 22 | 86 | 514 | 580 | 1.23e-13 | 73.2 |
| MS.gene038430.t1 | MTR_7g020860 | 47.761 | 67 | 33 | 1 | 22 | 86 | 514 | 580 | 1.33e-13 | 72.8 |
| MS.gene038430.t1 | MTR_8g100100 | 46.753 | 77 | 36 | 2 | 12 | 86 | 499 | 572 | 1.34e-12 | 70.1 |
| MS.gene038430.t1 | MTR_8g100100 | 46.753 | 77 | 36 | 2 | 12 | 86 | 505 | 578 | 1.35e-12 | 70.1 |
| MS.gene038430.t1 | MTR_3g098680 | 45.946 | 74 | 35 | 2 | 12 | 83 | 502 | 572 | 7.92e-12 | 67.4 |
| MS.gene038430.t1 | MTR_8g464390 | 33.562 | 146 | 69 | 5 | 46 | 164 | 1 | 145 | 1.05e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038430.t1 | AT4G17890 | 66.748 | 412 | 122 | 6 | 2 | 401 | 5 | 413 | 0.0 | 526 |
| MS.gene038430.t1 | AT5G46750 | 62.927 | 410 | 135 | 7 | 1 | 401 | 1 | 402 | 5.98e-176 | 496 |
| MS.gene038430.t1 | AT4G17890 | 66.227 | 379 | 113 | 6 | 2 | 368 | 5 | 380 | 6.83e-169 | 478 |
| MS.gene038430.t1 | AT2G35210 | 62.406 | 399 | 137 | 8 | 1 | 392 | 1 | 393 | 3.32e-158 | 451 |
| MS.gene038430.t1 | AT2G35210 | 60.117 | 341 | 124 | 7 | 1 | 335 | 1 | 335 | 4.99e-128 | 374 |
| MS.gene038430.t1 | AT3G53710 | 45.113 | 133 | 68 | 1 | 13 | 145 | 7 | 134 | 1.06e-32 | 128 |
| MS.gene038430.t1 | AT3G53710 | 45.113 | 133 | 68 | 1 | 13 | 145 | 7 | 134 | 1.06e-32 | 128 |
| MS.gene038430.t1 | AT3G53710 | 45.113 | 133 | 68 | 1 | 13 | 145 | 7 | 134 | 1.06e-32 | 128 |
| MS.gene038430.t1 | AT2G37550 | 44.275 | 131 | 68 | 1 | 13 | 143 | 7 | 132 | 2.44e-32 | 127 |
| MS.gene038430.t1 | AT2G37550 | 44.275 | 131 | 68 | 1 | 13 | 143 | 7 | 132 | 2.44e-32 | 127 |
| MS.gene038430.t1 | AT5G54310 | 33.684 | 190 | 95 | 5 | 12 | 170 | 18 | 207 | 3.45e-23 | 101 |
| MS.gene038430.t1 | AT3G17660 | 46.250 | 80 | 43 | 0 | 12 | 91 | 18 | 97 | 7.99e-22 | 92.4 |
| MS.gene038430.t1 | AT3G17660 | 46.250 | 80 | 43 | 0 | 12 | 91 | 18 | 97 | 1.56e-21 | 92.8 |
| MS.gene038430.t1 | AT3G17660 | 46.250 | 80 | 43 | 0 | 12 | 91 | 18 | 97 | 6.90e-21 | 91.3 |
| MS.gene038430.t1 | AT3G07940 | 49.315 | 73 | 36 | 1 | 13 | 84 | 50 | 122 | 4.45e-18 | 84.0 |
| MS.gene038430.t1 | AT3G07940 | 49.315 | 73 | 36 | 1 | 13 | 84 | 50 | 122 | 9.99e-18 | 84.7 |
| MS.gene038430.t1 | AT4G21160 | 42.500 | 80 | 45 | 1 | 13 | 91 | 18 | 97 | 1.53e-17 | 83.6 |
| MS.gene038430.t1 | AT4G21160 | 42.500 | 80 | 45 | 1 | 13 | 91 | 18 | 97 | 1.53e-17 | 83.6 |
| MS.gene038430.t1 | AT4G21160 | 42.500 | 80 | 45 | 1 | 13 | 91 | 18 | 97 | 1.53e-17 | 83.6 |
| MS.gene038430.t1 | AT4G21160 | 42.500 | 80 | 45 | 1 | 13 | 91 | 18 | 97 | 1.53e-17 | 83.6 |
| MS.gene038430.t1 | AT4G05330 | 41.250 | 80 | 46 | 1 | 13 | 91 | 18 | 97 | 1.11e-16 | 80.9 |
| MS.gene038430.t1 | AT4G05330 | 41.250 | 80 | 46 | 1 | 13 | 91 | 18 | 97 | 1.11e-16 | 80.9 |
| MS.gene038430.t1 | AT4G16220 | 57.353 | 68 | 23 | 2 | 64 | 128 | 121 | 185 | 2.61e-14 | 72.8 |
| MS.gene038430.t1 | AT1G60860 | 50.000 | 64 | 30 | 1 | 22 | 83 | 479 | 542 | 3.25e-14 | 75.1 |
| MS.gene038430.t1 | AT1G60860 | 50.000 | 64 | 30 | 1 | 22 | 83 | 368 | 431 | 3.29e-14 | 74.7 |
| MS.gene038430.t1 | AT1G60860 | 50.000 | 64 | 30 | 1 | 22 | 83 | 308 | 371 | 4.27e-14 | 74.3 |
| MS.gene038430.t1 | AT5G13300 | 43.836 | 73 | 39 | 1 | 22 | 92 | 513 | 585 | 4.86e-14 | 74.3 |
| MS.gene038430.t1 | AT1G10870 | 51.562 | 64 | 29 | 1 | 22 | 83 | 479 | 542 | 7.24e-14 | 73.9 |
| MS.gene038430.t1 | AT1G10870 | 51.562 | 64 | 29 | 1 | 22 | 83 | 479 | 542 | 8.09e-14 | 73.9 |
| MS.gene038430.t1 | AT5G61980 | 48.438 | 64 | 31 | 1 | 22 | 83 | 510 | 573 | 9.17e-14 | 73.6 |
| MS.gene038430.t1 | AT3G17660 | 53.061 | 49 | 23 | 0 | 12 | 60 | 18 | 66 | 1.06e-12 | 67.4 |
Find 68 sgRNAs with CRISPR-Local
Find 276 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTGGTTTCCCGAAGAAATT+TGG | 0.187342 | 8.4:+35415665 | MS.gene038430:CDS |
| CAGCATCTCTTGCTTTGTTC+TGG | 0.224885 | 8.4:-35416564 | None:intergenic |
| ACTAGAGCAGGTGGTTCTTC+AGG | 0.300396 | 8.4:-35415476 | None:intergenic |
| CTCCTTGATGACAGATCTTC+AGG | 0.319205 | 8.4:+35417449 | MS.gene038430:CDS |
| CAAGTTGAAGTCAGAAAATA+AGG | 0.319790 | 8.4:+35413043 | MS.gene038430:CDS |
| GTTGCTTATCAGAGTTCTAA+TGG | 0.323772 | 8.4:+35415087 | MS.gene038430:CDS |
| CAGAGTTCTAATGGACTTCC+TGG | 0.334434 | 8.4:+35415096 | MS.gene038430:CDS |
| CTTGTACAACTCTGCAGCTC+TGG | 0.341690 | 8.4:-35415001 | None:intergenic |
| TCTCTCCTGCAATGTTCTTA+AGG | 0.357125 | 8.4:-35417398 | None:intergenic |
| TCAAACTTCTTTGCAGACTT+TGG | 0.358116 | 8.4:+35415635 | MS.gene038430:CDS |
| CAGTCGTCTGAGTTGGATTC+CGG | 0.360915 | 8.4:+35415572 | MS.gene038430:CDS |
| AATAATTTGAAGAAGTCTAT+TGG | 0.365206 | 8.4:+35415216 | MS.gene038430:CDS |
| TCTGAAGACGAGGTTCTTAT+CGG | 0.372274 | 8.4:-35413015 | None:intergenic |
| TCTTCCCTTAAGAACATTGC+AGG | 0.374215 | 8.4:+35417393 | MS.gene038430:CDS |
| AAGAACATTGCAGGAGAGAC+TGG | 0.375056 | 8.4:+35417402 | MS.gene038430:CDS |
| TTACCTTCTTATTGAGCTTA+CGG | 0.385740 | 8.4:-35415275 | None:intergenic |
| CTCTCCTGCAATGTTCTTAA+GGG | 0.388884 | 8.4:-35417397 | None:intergenic |
| GTATTTGACCCAAATTTCTT+CGG | 0.390787 | 8.4:-35415674 | None:intergenic |
| TATTTGACCCAAATTTCTTC+GGG | 0.392303 | 8.4:-35415673 | None:intergenic |
| TACCTTCTTATTGAGCTTAC+GGG | 0.406262 | 8.4:-35415274 | None:intergenic |
| GCAGACTTTGGAATGGATAG+TGG | 0.415776 | 8.4:+35415647 | MS.gene038430:CDS |
| GTGGTTTCCCGAAGAAATTT+GGG | 0.427027 | 8.4:+35415666 | MS.gene038430:CDS |
| CTAATGGACTTCCTGGTGTC+AGG | 0.438196 | 8.4:+35415103 | MS.gene038430:CDS |
| ATTGAATGTATTTGAACCTC+CGG | 0.459068 | 8.4:-35415591 | None:intergenic |
| GAAGGAAGTAGCTAAAAGTA+TGG | 0.460701 | 8.4:+35415035 | MS.gene038430:CDS |
| TCAAAACGAGAAGTCATAGA+TGG | 0.464553 | 8.4:-35415533 | None:intergenic |
| TTAGAACTCTGATAAGCAAC+AGG | 0.481375 | 8.4:-35415084 | None:intergenic |
| CTTCTTTGCAGACTTTGGAA+TGG | 0.490698 | 8.4:+35415640 | MS.gene038430:CDS |
| ATCGCTAGCAGCAAGATCAA+TGG | 0.517560 | 8.4:-35417191 | None:intergenic |
| ACATGGGCGTCAGTAACGTA+TGG | 0.518284 | 8.4:+35413256 | MS.gene038430:CDS |
| AAAAGTATGGCTGAAGAGAA+AGG | 0.520493 | 8.4:+35415048 | MS.gene038430:CDS |
| ACATTGTTGTTTGTCGTGGA+TGG | 0.525567 | 8.4:-35415500 | None:intergenic |
| TGATAAGCAACAGGTGATGA+AGG | 0.530089 | 8.4:-35415075 | None:intergenic |
| GATCTACAAACTTAGACTCA+TGG | 0.530785 | 8.4:+35414869 | MS.gene038430:intron |
| AAGCAACATGGTTGGACCGA+TGG | 0.531171 | 8.4:+35414952 | MS.gene038430:CDS |
| AAGATCAATGGAGGAATCTC+CGG | 0.531888 | 8.4:-35417179 | None:intergenic |
| CGGAATCCAACTCAGACGAC+TGG | 0.539405 | 8.4:-35415571 | None:intergenic |
| TGTCATCAAGGAGGAGGCCA+AGG | 0.539734 | 8.4:-35417439 | None:intergenic |
| CAAACAACAATGTTTCTGTC+AGG | 0.547907 | 8.4:+35415510 | MS.gene038430:CDS |
| TCTGCCGTTCATCGAAGTCT+CGG | 0.549396 | 8.4:+35413301 | MS.gene038430:CDS |
| AGAAACATTGTTGTTTGTCG+TGG | 0.550405 | 8.4:-35415504 | None:intergenic |
| GCAAAGAAGTTTGATGACTT+CGG | 0.551658 | 8.4:-35415626 | None:intergenic |
| ACTATTGTATGCGAGGCTCT+AGG | 0.552723 | 8.4:-35415189 | None:intergenic |
| TACGTTACTGACGCCCATGT+TGG | 0.552830 | 8.4:-35413253 | None:intergenic |
| TAATGTCCAGTCGTCTGAGT+TGG | 0.557059 | 8.4:+35415565 | MS.gene038430:CDS |
| GTCGTGGATGGAACTAGAGC+AGG | 0.577054 | 8.4:-35415488 | None:intergenic |
| GTACAAGCAAATTCTTGCGA+AGG | 0.584924 | 8.4:+35415017 | MS.gene038430:CDS |
| AAGATCTGTCATCAAGGAGG+AGG | 0.586831 | 8.4:-35417445 | None:intergenic |
| TGCCCGTAAGCTCAATAAGA+AGG | 0.587772 | 8.4:+35415272 | MS.gene038430:CDS |
| ATTTGATACTATTGTATGCG+AGG | 0.588190 | 8.4:-35415196 | None:intergenic |
| AGAACATTGCAGGAGAGACT+GGG | 0.594396 | 8.4:+35417403 | MS.gene038430:CDS |
| AAAAGAAAACACATTAGAGA+AGG | 0.594618 | 8.4:+35415140 | MS.gene038430:CDS |
| CAACATGGTTGGACCGATGG+TGG | 0.600620 | 8.4:+35414955 | MS.gene038430:CDS |
| CATGGGCGTCAGTAACGTAT+GGG | 0.603242 | 8.4:+35413257 | MS.gene038430:CDS |
| AATTTGAAGAAGTCTATTGG+TGG | 0.609978 | 8.4:+35415219 | MS.gene038430:CDS |
| TCGTCTGAGTTGGATTCCGG+AGG | 0.612556 | 8.4:+35415575 | MS.gene038430:CDS |
| GTCCTGAAGATCTGTCATCA+AGG | 0.612922 | 8.4:-35417451 | None:intergenic |
| ACCTCATTGATCCTGACACC+AGG | 0.614869 | 8.4:-35415114 | None:intergenic |
| TGCTCATAGAGAGACTCACT+TGG | 0.640748 | 8.4:-35415449 | None:intergenic |
| AACACCGAGACTTCGATGAA+CGG | 0.641366 | 8.4:-35413305 | None:intergenic |
| CGGCAGAACAATCAATGCAG+AGG | 0.642639 | 8.4:-35413285 | None:intergenic |
| GTGGATGGAACTAGAGCAGG+TGG | 0.656503 | 8.4:-35415485 | None:intergenic |
| GCAATACGAAGAATCCAACA+TGG | 0.667289 | 8.4:+35413239 | MS.gene038430:CDS |
| GCTAGCAGCAAGATCAATGG+AGG | 0.673995 | 8.4:-35417188 | None:intergenic |
| TTCGTCTGCCATCTCCAGTG+CGG | 0.684569 | 8.4:+35417141 | MS.gene038430:CDS |
| CAATACGAAGAATCCAACAT+GGG | 0.708002 | 8.4:+35413240 | MS.gene038430:CDS |
| CTGAAGATCTGTCATCAAGG+AGG | 0.712381 | 8.4:-35417448 | None:intergenic |
| TCCTGGTGTCAGGATCAATG+AGG | 0.723936 | 8.4:+35415113 | MS.gene038430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATAAAATATGTAATGA+TGG | + | chr8.4:35413575-35413594 | MS.gene038430:intron | 10.0% |
| !! | ATCAATATTATATTAGAATT+AGG | + | chr8.4:35414388-35414407 | MS.gene038430:intron | 10.0% |
| !! | TATTATTTGATATGAAAATT+AGG | + | chr8.4:35417004-35417023 | MS.gene038430:intron | 10.0% |
| !! | AATAAAAATAAATAAGTGCA+TGG | - | chr8.4:35416451-35416470 | None:intergenic | 15.0% |
| !! | ATAATAACAATATTAAGGTA+TGG | + | chr8.4:35416108-35416127 | MS.gene038430:intron | 15.0% |
| !! | CCAAAAAAAAAAAAAAGATA+TGG | + | chr8.4:35416295-35416314 | MS.gene038430:intron | 15.0% |
| !! | TAATGTCACATTAAAATTTA+AGG | - | chr8.4:35415977-35415996 | None:intergenic | 15.0% |
| !! | TTCTTATTGAAAAATCTTAT+AGG | + | chr8.4:35417060-35417079 | MS.gene038430:intron | 15.0% |
| !!! | CCATATCTTTTTTTTTTTTT+TGG | - | chr8.4:35416298-35416317 | None:intergenic | 15.0% |
| !!! | TTATAATTTGATTTGAATAG+TGG | + | chr8.4:35413473-35413492 | MS.gene038430:intron | 15.0% |
| !!! | TTGTCTTTTTTTTTATATAC+TGG | + | chr8.4:35415335-35415354 | MS.gene038430:intron | 15.0% |
| !!! | TTTCCTTAATTAATTTTACT+AGG | + | chr8.4:35414648-35414667 | MS.gene038430:intron | 15.0% |
| !!! | TTTCTTTTGATTTTTTATCT+TGG | + | chr8.4:35413087-35413106 | MS.gene038430:intron | 15.0% |
| !!! | TTTTTCTTTCAAAAATTTGT+CGG | + | chr8.4:35415950-35415969 | MS.gene038430:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTGGATCA+TGG | - | chr8.4:35416291-35416310 | None:intergenic | 15.0% |
| !! | AAATTCTTAGAGATGAATTT+AGG | - | chr8.4:35416772-35416791 | None:intergenic | 20.0% |
| !! | AATAATTTGAAGAAGTCTAT+TGG | + | chr8.4:35415216-35415235 | MS.gene038430:CDS | 20.0% |
| !! | AATTCTTAGAGATGAATTTA+GGG | - | chr8.4:35416771-35416790 | None:intergenic | 20.0% |
| !! | ACAACCATAAAATTAATTCA+GGG | - | chr8.4:35416009-35416028 | None:intergenic | 20.0% |
| !! | ACTAATATAATTGGCATTTA+TGG | + | chr8.4:35416904-35416923 | MS.gene038430:intron | 20.0% |
| !! | ATCAATATTATATTAGAACC+AGG | + | chr8.4:35414332-35414351 | MS.gene038430:intron | 20.0% |
| !! | CGAAAAATGACTAATATAAT+TGG | + | chr8.4:35416895-35416914 | MS.gene038430:intron | 20.0% |
| !! | GTGCTATAATAACAATATTA+AGG | + | chr8.4:35416103-35416122 | MS.gene038430:intron | 20.0% |
| !! | TAAAAAATACACTAAACTCA+CGG | - | chr8.4:35413800-35413819 | None:intergenic | 20.0% |
| !! | TACAACCATAAAATTAATTC+AGG | - | chr8.4:35416010-35416029 | None:intergenic | 20.0% |
| !! | TATAAAATATGTAATGATGG+TGG | + | chr8.4:35413578-35413597 | MS.gene038430:intron | 20.0% |
| !! | TCAAAGGGTTATATAATAAA+AGG | + | chr8.4:35415888-35415907 | MS.gene038430:intron | 20.0% |
| !! | TGAAATCATTGAAAAATTCT+AGG | + | chr8.4:35416194-35416213 | MS.gene038430:intron | 20.0% |
| !! | TGATTAATGAAAAACACAAA+AGG | - | chr8.4:35414316-35414335 | None:intergenic | 20.0% |
| !! | TGTATAAATATCAAACTGAA+CGG | - | chr8.4:35413954-35413973 | None:intergenic | 20.0% |
| !! | TTAATCTAGAAAGATTTGAT+TGG | + | chr8.4:35414687-35414706 | MS.gene038430:intron | 20.0% |
| !! | TTGATAGAATATAATGAAGA+AGG | + | chr8.4:35414809-35414828 | MS.gene038430:intron | 20.0% |
| !!! | ATCTCTAAGAATTTTTTTCA+TGG | + | chr8.4:35416778-35416797 | MS.gene038430:intron | 20.0% |
| !!! | ATCTTGTTATAACTTTGAAT+TGG | - | chr8.4:35415829-35415848 | None:intergenic | 20.0% |
| !!! | ATGTAGTTTTTGTTTGAAAA+GGG | + | chr8.4:35413528-35413547 | MS.gene038430:intron | 20.0% |
| !!! | ATTTTATGAGAAAGATGAAA+GGG | + | chr8.4:35413823-35413842 | MS.gene038430:intron | 20.0% |
| !!! | CAACTAAAAATAATGAGTTT+TGG | + | chr8.4:35414901-35414920 | MS.gene038430:CDS | 20.0% |
| !!! | GAATAATGGTAATGAAATTA+GGG | - | chr8.4:35417286-35417305 | None:intergenic | 20.0% |
| !!! | TAAAACATATCTTCTAGTTT+TGG | - | chr8.4:35416045-35416064 | None:intergenic | 20.0% |
| !!! | TAGAAGATATGTTTTAACAA+AGG | + | chr8.4:35416049-35416068 | MS.gene038430:intron | 20.0% |
| !!! | TAGTGCATTAATTTGTATTA+TGG | + | chr8.4:35413615-35413634 | MS.gene038430:intron | 20.0% |
| !!! | TATGTAGTTTTTGTTTGAAA+AGG | + | chr8.4:35413527-35413546 | MS.gene038430:intron | 20.0% |
| !!! | TATTTTATGAGAAAGATGAA+AGG | + | chr8.4:35413822-35413841 | MS.gene038430:intron | 20.0% |
| !!! | TCTAGTTTTGGTAATTAAAT+TGG | - | chr8.4:35416033-35416052 | None:intergenic | 20.0% |
| !!! | TGAATAATGGTAATGAAATT+AGG | - | chr8.4:35417287-35417306 | None:intergenic | 20.0% |
| ! | AAAAGAAAACACATTAGAGA+AGG | + | chr8.4:35415140-35415159 | MS.gene038430:CDS | 25.0% |
| ! | AAATGATAGACAAGATAAAG+AGG | + | chr8.4:35413846-35413865 | MS.gene038430:intron | 25.0% |
| ! | AAGAGAAATGATAAGTAAGA+TGG | + | chr8.4:35414059-35414078 | MS.gene038430:intron | 25.0% |
| ! | AATTAGGATTGAAAGATGAT+TGG | + | chr8.4:35414404-35414423 | MS.gene038430:intron | 25.0% |
| ! | AGAGAAATGATAAGTAAGAT+GGG | + | chr8.4:35414060-35414079 | MS.gene038430:intron | 25.0% |
| ! | ATTCTTAGAGATGAATTTAG+GGG | - | chr8.4:35416770-35416789 | None:intergenic | 25.0% |
| ! | CAAAATTTCACTCAATTAAG+AGG | + | chr8.4:35414561-35414580 | MS.gene038430:intron | 25.0% |
| ! | CAAGAACTAAAACTGAATAA+TGG | - | chr8.4:35417300-35417319 | None:intergenic | 25.0% |
| ! | CAGCCTAGTAAAATTAATTA+AGG | - | chr8.4:35414654-35414673 | None:intergenic | 25.0% |
| ! | GCAGTAAAATACTATAAGAA+AGG | - | chr8.4:35416627-35416646 | None:intergenic | 25.0% |
| ! | GTTTCTATATCAATAACGAA+AGG | - | chr8.4:35417246-35417265 | None:intergenic | 25.0% |
| ! | TTAATTGAGAAAAGAAACTG+AGG | - | chr8.4:35414713-35414732 | None:intergenic | 25.0% |
| ! | TTAGAAGTTCTTATACAACA+TGG | - | chr8.4:35414465-35414484 | None:intergenic | 25.0% |
| ! | TTATTGATATAGAAACGTCA+TGG | + | chr8.4:35417250-35417269 | MS.gene038430:intron | 25.0% |
| ! | TTCGAGATTATTGTATTTAG+TGG | - | chr8.4:35416879-35416898 | None:intergenic | 25.0% |
| ! | TTGTAGATCTACATAACAAA+AGG | - | chr8.4:35414858-35414877 | None:intergenic | 25.0% |
| !! | ATTTCGTCATCTCAATTTTT+CGG | + | chr8.4:35416538-35416557 | MS.gene038430:CDS | 25.0% |
| !! | ATTTTCTGATTTACGTTATC+GGG | + | chr8.4:35413150-35413169 | MS.gene038430:intron | 25.0% |
| !! | CAAATTTTCTTTAAGCAACA+TGG | + | chr8.4:35414940-35414959 | MS.gene038430:CDS | 25.0% |
| !! | CATTTTCTGATTTACGTTAT+CGG | + | chr8.4:35413149-35413168 | MS.gene038430:intron | 25.0% |
| !! | CTTAATTAATTTTACTAGGC+TGG | + | chr8.4:35414652-35414671 | MS.gene038430:intron | 25.0% |
| !! | GGTAAAATGATTTTGTGATT+AGG | + | chr8.4:35413549-35413568 | MS.gene038430:intron | 25.0% |
| !! | TACAAAGAAAATTAGCTCTT+TGG | - | chr8.4:35417032-35417051 | None:intergenic | 25.0% |
| !! | TTTTGTCATGTATAAGATTG+AGG | + | chr8.4:35416474-35416493 | MS.gene038430:intron | 25.0% |
| !!! | AATTTGATTTGAATAGTGGA+TGG | + | chr8.4:35413477-35413496 | MS.gene038430:intron | 25.0% |
| !!! | CTAAAAATAATGAGTTTTGG+AGG | + | chr8.4:35414904-35414923 | MS.gene038430:CDS | 25.0% |
| !!! | TGTGTTGTGATGATTTTTTT+TGG | + | chr8.4:35413197-35413216 | MS.gene038430:intron | 25.0% |
| AAACAAACTTAAGACTCAAC+CGG | + | chr8.4:35416222-35416241 | MS.gene038430:intron | 30.0% | |
| AAAGACAAAAATAACCCAAC+AGG | - | chr8.4:35415366-35415385 | None:intergenic | 30.0% | |
| AATTTGAAGAAGTCTATTGG+TGG | + | chr8.4:35415219-35415238 | MS.gene038430:CDS | 30.0% | |
| ACCATAAAATTAATTCAGGG+AGG | - | chr8.4:35416006-35416025 | None:intergenic | 30.0% | |
| ACTAATATGACAGGTATTCT+AGG | - | chr8.4:35416850-35416869 | None:intergenic | 30.0% | |
| AGAGTAATGCTTTGTGTTTA+GGG | + | chr8.4:35413430-35413449 | MS.gene038430:intron | 30.0% | |
| ATAAATAAGTGCATGGCAAA+AGG | - | chr8.4:35416444-35416463 | None:intergenic | 30.0% | |
| ATTGAATGTATTTGAACCTC+CGG | - | chr8.4:35415594-35415613 | None:intergenic | 30.0% | |
| ATTTGATACTATTGTATGCG+AGG | - | chr8.4:35415199-35415218 | None:intergenic | 30.0% | |
| CTTTCATATGAGTATATGTC+AGG | + | chr8.4:35414605-35414624 | MS.gene038430:intron | 30.0% | |
| GGATCATTTAGGAAAAGTAA+TGG | + | chr8.4:35414205-35414224 | MS.gene038430:intron | 30.0% | |
| GTATTTGACCCAAATTTCTT+CGG | - | chr8.4:35415677-35415696 | None:intergenic | 30.0% | |
| TAGAGTAATGCTTTGTGTTT+AGG | + | chr8.4:35413429-35413448 | MS.gene038430:intron | 30.0% | |
| TATTTGACCCAAATTTCTTC+GGG | - | chr8.4:35415676-35415695 | None:intergenic | 30.0% | |
| TCATTTAGGAAAAGTAATGG+TGG | + | chr8.4:35414208-35414227 | MS.gene038430:intron | 30.0% | |
| TGGTTGAAAACTAATATGAC+AGG | - | chr8.4:35416859-35416878 | None:intergenic | 30.0% | |
| TGTATTATGGATGTAGACAT+GGG | + | chr8.4:35413628-35413647 | MS.gene038430:intron | 30.0% | |
| TTACCTTCTTATTGAGCTTA+CGG | - | chr8.4:35415278-35415297 | None:intergenic | 30.0% | |
| TTAGCTAAACTGGATCATTT+AGG | + | chr8.4:35414194-35414213 | MS.gene038430:intron | 30.0% | |
| TTCTTGAATTGATGTCTGAT+GGG | + | chr8.4:35417314-35417333 | MS.gene038430:intron | 30.0% | |
| TTGTATTATGGATGTAGACA+TGG | + | chr8.4:35413627-35413646 | MS.gene038430:intron | 30.0% | |
| ! | AAATTGATTCTATGCCTTTG+TGG | + | chr8.4:35413763-35413782 | MS.gene038430:intron | 30.0% |
| ! | ACCTCCCTGAATTAATTTTA+TGG | + | chr8.4:35416002-35416021 | MS.gene038430:intron | 30.0% |
| ! | CAAATCTAAATAGTCTTGCT+TGG | - | chr8.4:35416361-35416380 | None:intergenic | 30.0% |
| ! | CAAGTTGAAGTCAGAAAATA+AGG | + | chr8.4:35413043-35413062 | MS.gene038430:CDS | 30.0% |
| ! | CATCAATCGATTATCTTTTC+AGG | + | chr8.4:35417216-35417235 | MS.gene038430:CDS | 30.0% |
| ! | CTACATAACAAAAGGCATAT+AGG | - | chr8.4:35414850-35414869 | None:intergenic | 30.0% |
| ! | GGGATTTTCTTGAATTGAAA+TGG | + | chr8.4:35413450-35413469 | MS.gene038430:intron | 30.0% |
| ! | TTTTCTTTAAGCAACATGGT+TGG | + | chr8.4:35414944-35414963 | MS.gene038430:CDS | 30.0% |
| !! | AATCGTATTCTTTTGATTGC+TGG | + | chr8.4:35416721-35416740 | MS.gene038430:intron | 30.0% |
| !! | ATTTGAATAGTGGATGGAAT+TGG | + | chr8.4:35413483-35413502 | MS.gene038430:intron | 30.0% |
| !! | GTTGTGGGTTTTGTAATTAT+TGG | + | chr8.4:35413663-35413682 | MS.gene038430:intron | 30.0% |
| !!! | CTCATTATTTTTAGTTGCTC+AGG | - | chr8.4:35414898-35414917 | None:intergenic | 30.0% |
| !!! | GGGTTTCAATTTTTTGTTGT+GGG | + | chr8.4:35413648-35413667 | MS.gene038430:intron | 30.0% |
| !!! | GTGTTCATATTAGTTTTGTG+AGG | + | chr8.4:35413323-35413342 | MS.gene038430:CDS | 30.0% |
| !!! | TACTCTGATTTTAGCTAAAC+TGG | + | chr8.4:35414184-35414203 | MS.gene038430:intron | 30.0% |
| !!! | TGGGTTTCAATTTTTTGTTG+TGG | + | chr8.4:35413647-35413666 | MS.gene038430:intron | 30.0% |
| AAAAGGTAGCATATCTGTGT+TGG | + | chr8.4:35413908-35413927 | MS.gene038430:intron | 35.0% | |
| AAAGGTAGCATATCTGTGTT+GGG | + | chr8.4:35413909-35413928 | MS.gene038430:intron | 35.0% | |
| ACCTCTACAAAAAACAACCA+TGG | + | chr8.4:35416247-35416266 | MS.gene038430:intron | 35.0% | |
| AGCTAAAATCAGAGTAACTG+AGG | - | chr8.4:35414180-35414199 | None:intergenic | 35.0% | |
| ATATACTGGAATTGCCTGTT+GGG | + | chr8.4:35415349-35415368 | MS.gene038430:intron | 35.0% | |
| ATCCAATATAGTCCCATAAC+AGG | - | chr8.4:35416690-35416709 | None:intergenic | 35.0% | |
| CAAATCCATCATGCAAAACA+TGG | + | chr8.4:35415850-35415869 | MS.gene038430:intron | 35.0% | |
| CAATACGAAGAATCCAACAT+GGG | + | chr8.4:35413240-35413259 | MS.gene038430:CDS | 35.0% | |
| GAAGGAAGTAGCTAAAAGTA+TGG | + | chr8.4:35415035-35415054 | MS.gene038430:CDS | 35.0% | |
| GATCTACAAACTTAGACTCA+TGG | + | chr8.4:35414869-35414888 | MS.gene038430:intron | 35.0% | |
| GTTCTTGAATTGATGTCTGA+TGG | + | chr8.4:35417313-35417332 | MS.gene038430:intron | 35.0% | |
| TACCTTCTTATTGAGCTTAC+GGG | - | chr8.4:35415277-35415296 | None:intergenic | 35.0% | |
| TATATACTGGAATTGCCTGT+TGG | + | chr8.4:35415348-35415367 | MS.gene038430:intron | 35.0% | |
| TCAAAACGAGAAGTCATAGA+TGG | - | chr8.4:35415536-35415555 | None:intergenic | 35.0% | |
| TCAAACTTCTTTGCAGACTT+TGG | + | chr8.4:35415635-35415654 | MS.gene038430:CDS | 35.0% | |
| TCCAATATAGTCCCATAACA+GGG | - | chr8.4:35416689-35416708 | None:intergenic | 35.0% | |
| TTAGAACTCTGATAAGCAAC+AGG | - | chr8.4:35415087-35415106 | None:intergenic | 35.0% | |
| TTATGGTTCTTTAGCGACTA+GGG | + | chr8.4:35416921-35416940 | MS.gene038430:intron | 35.0% | |
| TTGCACTACAATCAATAGAG+AGG | + | chr8.4:35414784-35414803 | MS.gene038430:intron | 35.0% | |
| TTTATGGTTCTTTAGCGACT+AGG | + | chr8.4:35416920-35416939 | MS.gene038430:intron | 35.0% | |
| ! | AAAAGTATGGCTGAAGAGAA+AGG | + | chr8.4:35415048-35415067 | MS.gene038430:CDS | 35.0% |
| ! | ATTCAAGAAGCACAACAACA+TGG | - | chr8.4:35414440-35414459 | None:intergenic | 35.0% |
| ! | CAAACAACAATGTTTCTGTC+AGG | + | chr8.4:35415510-35415529 | MS.gene038430:CDS | 35.0% |
| ! | CACAGATATGCTACCTTTTA+CGG | - | chr8.4:35413907-35413926 | None:intergenic | 35.0% |
| ! | GCAAAGAAGTTTGATGACTT+CGG | - | chr8.4:35415629-35415648 | None:intergenic | 35.0% |
| ! | GTGGTCAGCTTAAACAATTT+TGG | + | chr8.4:35415762-35415781 | MS.gene038430:intron | 35.0% |
| ! | GTTGCTTATCAGAGTTCTAA+TGG | + | chr8.4:35415087-35415106 | MS.gene038430:CDS | 35.0% |
| ! | TAGTCACTCTTGTTACTTCA+GGG | + | chr8.4:35417118-35417137 | MS.gene038430:intron | 35.0% |
| ! | TGCTTCTATTTTACCACCAT+CGG | - | chr8.4:35414971-35414990 | None:intergenic | 35.0% |
| !! | AAAGTGTTGTGTAACAACCA+TGG | - | chr8.4:35416267-35416286 | None:intergenic | 35.0% |
| !! | AGAAACATTGTTGTTTGTCG+TGG | - | chr8.4:35415507-35415526 | None:intergenic | 35.0% |
| !! | GACTTCTCGTTTTGAATATG+TGG | + | chr8.4:35415541-35415560 | MS.gene038430:CDS | 35.0% |
| !! | TGTCTTACATGGTTTTGCAA+GGG | + | chr8.4:35416133-35416152 | MS.gene038430:intron | 35.0% |
| !!! | ACCATGGTTGTTTTTTGTAG+AGG | - | chr8.4:35416251-35416270 | None:intergenic | 35.0% |
| !!! | CTGCGTCTTTGTTTTATACT+TGG | + | chr8.4:35414748-35414767 | MS.gene038430:intron | 35.0% |
| !!! | TTGTTTTTTGTAGAGGTGTC+CGG | - | chr8.4:35416244-35416263 | None:intergenic | 35.0% |
| AAAAAAATCCGCACTGGAGA+TGG | - | chr8.4:35417152-35417171 | None:intergenic | 40.0% | |
| AAGATCAATGGAGGAATCTC+CGG | - | chr8.4:35417182-35417201 | None:intergenic | 40.0% | |
| AAGGTAGCATATCTGTGTTG+GGG | + | chr8.4:35413910-35413929 | MS.gene038430:intron | 40.0% | |
| AAGGTATGGTCTGTCTTACA+TGG | + | chr8.4:35416122-35416141 | MS.gene038430:intron | 40.0% | |
| AATCAGGATTGGGAGGAAAA+GGG | - | chr8.4:35417349-35417368 | None:intergenic | 40.0% | |
| AATGTCTTTCCTGCCGTAAA+AGG | + | chr8.4:35413891-35413910 | MS.gene038430:intron | 40.0% | |
| AGTGGTTTCCCGAAGAAATT+TGG | + | chr8.4:35415665-35415684 | MS.gene038430:CDS | 40.0% | |
| AGTTGCACCATACAAAACAG+AGG | - | chr8.4:35415732-35415751 | None:intergenic | 40.0% | |
| ATCCATCATGCAAAACATGG+TGG | + | chr8.4:35415853-35415872 | MS.gene038430:intron | 40.0% | |
| CAGCAATCATCTTTCAATCC+TGG | - | chr8.4:35414353-35414372 | None:intergenic | 40.0% | |
| CCAATATAGTCCCATAACAG+GGG | - | chr8.4:35416688-35416707 | None:intergenic | 40.0% | |
| CCATACAAAACAGAGGTTGA+TGG | - | chr8.4:35415725-35415744 | None:intergenic | 40.0% | |
| CCTGCAAAACAATCAGGATT+GGG | - | chr8.4:35417359-35417378 | None:intergenic | 40.0% | |
| CTCTCCTGCAATGTTCTTAA+GGG | - | chr8.4:35417400-35417419 | None:intergenic | 40.0% | |
| GAGTAACTGAGGACAAAGTA+TGG | - | chr8.4:35414169-35414188 | None:intergenic | 40.0% | |
| GATTATCACTCCCCTGTTAT+GGG | + | chr8.4:35416675-35416694 | MS.gene038430:intron | 40.0% | |
| GCAATACGAAGAATCCAACA+TGG | + | chr8.4:35413239-35413258 | MS.gene038430:CDS | 40.0% | |
| GTACAAGCAAATTCTTGCGA+AGG | + | chr8.4:35415017-35415036 | MS.gene038430:CDS | 40.0% | |
| GTGGTTTCCCGAAGAAATTT+GGG | + | chr8.4:35415666-35415685 | MS.gene038430:CDS | 40.0% | |
| GTTAGTGTTGTGTTGTGCAT+TGG | + | chr8.4:35413381-35413400 | MS.gene038430:intron | 40.0% | |
| GTTCCATAGAGACTAGGAAA+GGG | - | chr8.4:35416828-35416847 | None:intergenic | 40.0% | |
| TAGGAAAAGTAATGGTGGCT+GGG | + | chr8.4:35414213-35414232 | MS.gene038430:intron | 40.0% | |
| TAGTGATTTCCCCGCATTAA+AGG | + | chr8.4:35414128-35414147 | MS.gene038430:intron | 40.0% | |
| TATCTTGATTGCATGTGCAG+AGG | + | chr8.4:35416076-35416095 | MS.gene038430:intron | 40.0% | |
| TATGGTTCTTTAGCGACTAG+GGG | + | chr8.4:35416922-35416941 | MS.gene038430:intron | 40.0% | |
| TCACTTGGCTACATTTGACA+AGG | - | chr8.4:35415437-35415456 | None:intergenic | 40.0% | |
| TCTCTCCTGCAATGTTCTTA+AGG | - | chr8.4:35417401-35417420 | None:intergenic | 40.0% | |
| TCTGAAGACGAGGTTCTTAT+CGG | - | chr8.4:35413018-35413037 | None:intergenic | 40.0% | |
| TCTTCCCTTAAGAACATTGC+AGG | + | chr8.4:35417393-35417412 | MS.gene038430:CDS | 40.0% | |
| TGAGGACAAAGTATGGAATC+CGG | - | chr8.4:35414162-35414181 | None:intergenic | 40.0% | |
| TGATAAGCAACAGGTGATGA+AGG | - | chr8.4:35415078-35415097 | None:intergenic | 40.0% | |
| TGATTATCACTCCCCTGTTA+TGG | + | chr8.4:35416674-35416693 | MS.gene038430:intron | 40.0% | |
| TTAGGAAAAGTAATGGTGGC+TGG | + | chr8.4:35414212-35414231 | MS.gene038430:intron | 40.0% | |
| TTCCATAGAGACTAGGAAAG+GGG | - | chr8.4:35416827-35416846 | None:intergenic | 40.0% | |
| TTCTAGGTTCCATAGAGACT+AGG | - | chr8.4:35416834-35416853 | None:intergenic | 40.0% | |
| TTGATTCTATGCCTTTGTGG+CGG | + | chr8.4:35413766-35413785 | MS.gene038430:intron | 40.0% | |
| ! | CCATCAACCTCTGTTTTGTA+TGG | + | chr8.4:35415722-35415741 | MS.gene038430:intron | 40.0% |
| ! | CTAGTCACTCTTGTTACTTC+AGG | + | chr8.4:35417117-35417136 | MS.gene038430:intron | 40.0% |
| ! | CTATTGGTGGTAAAAAGCCT+GGG | + | chr8.4:35415232-35415251 | MS.gene038430:CDS | 40.0% |
| ! | CTTCTTTGCAGACTTTGGAA+TGG | + | chr8.4:35415640-35415659 | MS.gene038430:CDS | 40.0% |
| ! | TCTATTGGTGGTAAAAAGCC+TGG | + | chr8.4:35415231-35415250 | MS.gene038430:CDS | 40.0% |
| ! | TTCCACCATGTTTTGCATGA+TGG | - | chr8.4:35415858-35415877 | None:intergenic | 40.0% |
| !! | AAAACAGAGGTTGATGGCAT+AGG | - | chr8.4:35415719-35415738 | None:intergenic | 40.0% |
| !! | AAACAGAGGTTGATGGCATA+GGG | - | chr8.4:35415718-35415737 | None:intergenic | 40.0% |
| !! | ACATTGTTGTTTGTCGTGGA+TGG | - | chr8.4:35415503-35415522 | None:intergenic | 40.0% |
| !! | ACTTGAGTTTTCTGAAGACG+AGG | - | chr8.4:35413028-35413047 | None:intergenic | 40.0% |
| !! | ATAGTGGATGGAATTGGACT+CGG | + | chr8.4:35413489-35413508 | MS.gene038430:intron | 40.0% |
| !! | CTGTCTTACATGGTTTTGCA+AGG | + | chr8.4:35416132-35416151 | MS.gene038430:intron | 40.0% |
| !! | GTCTTACATGGTTTTGCAAG+GGG | + | chr8.4:35416134-35416153 | MS.gene038430:intron | 40.0% |
| !! | TGGAAAGTGCTGACATCAAA+GGG | + | chr8.4:35415873-35415892 | MS.gene038430:intron | 40.0% |
| !!! | ATCTCCAGTGCGGATTTTTT+TGG | + | chr8.4:35417151-35417170 | MS.gene038430:CDS | 40.0% |
| !!! | TCTCCTTTTTTGCATGCGTT+GGG | + | chr8.4:35413737-35413756 | MS.gene038430:intron | 40.0% |
| AACACCGAGACTTCGATGAA+CGG | - | chr8.4:35413308-35413327 | None:intergenic | 45.0% | |
| AACCCCTTTCCTAGTCTCTA+TGG | + | chr8.4:35416822-35416841 | MS.gene038430:intron | 45.0% | |
| AAGAACATTGCAGGAGAGAC+TGG | + | chr8.4:35417402-35417421 | MS.gene038430:CDS | 45.0% | |
| AAGATCTGTCATCAAGGAGG+AGG | - | chr8.4:35417448-35417467 | None:intergenic | 45.0% | |
| ACTATTGTATGCGAGGCTCT+AGG | - | chr8.4:35415192-35415211 | None:intergenic | 45.0% | |
| AGAACATTGCAGGAGAGACT+GGG | + | chr8.4:35417403-35417422 | MS.gene038430:CDS | 45.0% | |
| AGGTAGCATATCTGTGTTGG+GGG | + | chr8.4:35413911-35413930 | MS.gene038430:intron | 45.0% | |
| ATCAGGATTGGGAGGAAAAG+GGG | - | chr8.4:35417348-35417367 | None:intergenic | 45.0% | |
| ATCGCTAGCAGCAAGATCAA+TGG | - | chr8.4:35417194-35417213 | None:intergenic | 45.0% | |
| ATGGTTCTTTAGCGACTAGG+GGG | + | chr8.4:35416923-35416942 | MS.gene038430:intron | 45.0% | |
| CAACCCAACGCATGCAAAAA+AGG | - | chr8.4:35413743-35413762 | None:intergenic | 45.0% | |
| CAACGCATGCAAAAAAGGAG+AGG | - | chr8.4:35413738-35413757 | None:intergenic | 45.0% | |
| CAATCAGGATTGGGAGGAAA+AGG | - | chr8.4:35417350-35417369 | None:intergenic | 45.0% | |
| CCCCTGTTATGGGACTATAT+TGG | + | chr8.4:35416685-35416704 | MS.gene038430:intron | 45.0% | |
| CTGAAGATCTGTCATCAAGG+AGG | - | chr8.4:35417451-35417470 | None:intergenic | 45.0% | |
| GCAAAACAATCAGGATTGGG+AGG | - | chr8.4:35417356-35417375 | None:intergenic | 45.0% | |
| GCCTGCAAAACAATCAGGAT+TGG | - | chr8.4:35417360-35417379 | None:intergenic | 45.0% | |
| GGTTCCATAGAGACTAGGAA+AGG | - | chr8.4:35416829-35416848 | None:intergenic | 45.0% | |
| GTAAAAAGCCTGGGAAGAGT+GGG | + | chr8.4:35415241-35415260 | MS.gene038430:CDS | 45.0% | |
| GTCACCAAAAAAATCCGCAC+TGG | - | chr8.4:35417158-35417177 | None:intergenic | 45.0% | |
| GTCCTGAAGATCTGTCATCA+AGG | - | chr8.4:35417454-35417473 | None:intergenic | 45.0% | |
| GTTGTGCCTGCAAAACAATC+AGG | - | chr8.4:35417365-35417384 | None:intergenic | 45.0% | |
| TAAAAAGCCTGGGAAGAGTG+GGG | + | chr8.4:35415242-35415261 | MS.gene038430:CDS | 45.0% | |
| TAATGTCCAGTCGTCTGAGT+TGG | + | chr8.4:35415565-35415584 | MS.gene038430:CDS | 45.0% | |
| TGATTCTATGCCTTTGTGGC+GGG | + | chr8.4:35413767-35413786 | MS.gene038430:intron | 45.0% | |
| TGATTGCATGTGCAGAGGTT+GGG | + | chr8.4:35416081-35416100 | MS.gene038430:intron | 45.0% | |
| TGCCCGTAAGCTCAATAAGA+AGG | + | chr8.4:35415272-35415291 | MS.gene038430:CDS | 45.0% | |
| TGCTCATAGAGAGACTCACT+TGG | - | chr8.4:35415452-35415471 | None:intergenic | 45.0% | |
| TGGGAAAAAACTCAGCTCCT+TGG | + | chr8.4:35417422-35417441 | MS.gene038430:CDS | 45.0% | |
| TTCAGGACCGAATCCTCTAA+AGG | + | chr8.4:35417466-35417485 | MS.gene038430:CDS | 45.0% | |
| TTGATTGCATGTGCAGAGGT+TGG | + | chr8.4:35416080-35416099 | MS.gene038430:intron | 45.0% | |
| TTTCCCCGCATTAAAGGTAG+CGG | + | chr8.4:35414134-35414153 | MS.gene038430:intron | 45.0% | |
| ! | AGGGCTTACTTGCACTTTTG+AGG | - | chr8.4:35415699-35415718 | None:intergenic | 45.0% |
| ! | CAGCATCTCTTGCTTTGTTC+TGG | - | chr8.4:35416567-35416586 | None:intergenic | 45.0% |
| ! | CTCCTTGATGACAGATCTTC+AGG | + | chr8.4:35417449-35417468 | MS.gene038430:CDS | 45.0% |
| ! | GATATGCTACCTTTTACGGC+AGG | - | chr8.4:35413903-35413922 | None:intergenic | 45.0% |
| ! | GGGGCACTCTTACATTATCA+AGG | + | chr8.4:35416942-35416961 | MS.gene038430:intron | 45.0% |
| !! | CAGAGTTCTAATGGACTTCC+TGG | + | chr8.4:35415096-35415115 | MS.gene038430:CDS | 45.0% |
| !! | CCCAATCCTGATTGTTTTGC+AGG | + | chr8.4:35417356-35417375 | MS.gene038430:intron | 45.0% |
| !! | GATTGTTTTGCAGGCACAAC+AGG | + | chr8.4:35417365-35417384 | MS.gene038430:intron | 45.0% |
| !! | GCAGACTTTGGAATGGATAG+TGG | + | chr8.4:35415647-35415666 | MS.gene038430:CDS | 45.0% |
| !! | GTGGAAAGTGCTGACATCAA+AGG | + | chr8.4:35415872-35415891 | MS.gene038430:intron | 45.0% |
| !!! | CTCTCCTTTTTTGCATGCGT+TGG | + | chr8.4:35413736-35413755 | MS.gene038430:intron | 45.0% |
| !!! | GCGGATTTTTTTGGTGACTC+CGG | + | chr8.4:35417160-35417179 | MS.gene038430:CDS | 45.0% |
| AAAAAGCCTGGGAAGAGTGG+GGG | + | chr8.4:35415243-35415262 | MS.gene038430:CDS | 50.0% | |
| AAGCAACATGGTTGGACCGA+TGG | + | chr8.4:35414952-35414971 | MS.gene038430:CDS | 50.0% | |
| ACATGGGCGTCAGTAACGTA+TGG | + | chr8.4:35413256-35413275 | MS.gene038430:CDS | 50.0% | |
| ACCTCATTGATCCTGACACC+AGG | - | chr8.4:35415117-35415136 | None:intergenic | 50.0% | |
| ACTAGAGCAGGTGGTTCTTC+AGG | - | chr8.4:35415479-35415498 | None:intergenic | 50.0% | |
| CATGGGCGTCAGTAACGTAT+GGG | + | chr8.4:35413257-35413276 | MS.gene038430:CDS | 50.0% | |
| CGGATCCGCTACCTTTAATG+CGG | - | chr8.4:35414142-35414161 | None:intergenic | 50.0% | |
| CGGCAGAACAATCAATGCAG+AGG | - | chr8.4:35413288-35413307 | None:intergenic | 50.0% | |
| CTTGTACAACTCTGCAGCTC+TGG | - | chr8.4:35415004-35415023 | None:intergenic | 50.0% | |
| GATCCGCTACCTTTAATGCG+GGG | - | chr8.4:35414140-35414159 | None:intergenic | 50.0% | |
| GATTCTATGCCTTTGTGGCG+GGG | + | chr8.4:35413768-35413787 | MS.gene038430:intron | 50.0% | |
| GCTAGCAGCAAGATCAATGG+AGG | - | chr8.4:35417191-35417210 | None:intergenic | 50.0% | |
| GGATCCGCTACCTTTAATGC+GGG | - | chr8.4:35414141-35414160 | None:intergenic | 50.0% | |
| GGTAAAAAGCCTGGGAAGAG+TGG | + | chr8.4:35415240-35415259 | MS.gene038430:CDS | 50.0% | |
| GGTAGCATATCTGTGTTGGG+GGG | + | chr8.4:35413912-35413931 | MS.gene038430:intron | 50.0% | |
| GTAGCATATCTGTGTTGGGG+GGG | + | chr8.4:35413913-35413932 | MS.gene038430:intron | 50.0% | |
| TACGTTACTGACGCCCATGT+TGG | - | chr8.4:35413256-35413275 | None:intergenic | 50.0% | |
| TCTGCCGTTCATCGAAGTCT+CGG | + | chr8.4:35413301-35413320 | MS.gene038430:CDS | 50.0% | |
| ! | CAGTCGTCTGAGTTGGATTC+CGG | + | chr8.4:35415572-35415591 | MS.gene038430:CDS | 50.0% |
| ! | TCCTGGTGTCAGGATCAATG+AGG | + | chr8.4:35415113-35415132 | MS.gene038430:CDS | 50.0% |
| !! | CGCATTAAAGGTAGCGGATC+CGG | + | chr8.4:35414140-35414159 | MS.gene038430:intron | 50.0% |
| !! | CTAATGGACTTCCTGGTGTC+AGG | + | chr8.4:35415103-35415122 | MS.gene038430:CDS | 50.0% |
| CAACATGGTTGGACCGATGG+TGG | + | chr8.4:35414955-35414974 | MS.gene038430:CDS | 55.0% | |
| CATATCTGTGTTGGGGGGGA+TGG | + | chr8.4:35413917-35413936 | MS.gene038430:intron | 55.0% | |
| CGGAATCCAACTCAGACGAC+TGG | - | chr8.4:35415574-35415593 | None:intergenic | 55.0% | |
| GGTGCAACTTCTACTGCACG+TGG | + | chr8.4:35415743-35415762 | MS.gene038430:intron | 55.0% | |
| GTCGTGGATGGAACTAGAGC+AGG | - | chr8.4:35415491-35415510 | None:intergenic | 55.0% | |
| GTGGATGGAACTAGAGCAGG+TGG | - | chr8.4:35415488-35415507 | None:intergenic | 55.0% | |
| GTGGATGGAATTGGACTCGG+AGG | + | chr8.4:35413492-35413511 | MS.gene038430:intron | 55.0% | |
| TGTCATCAAGGAGGAGGCCA+AGG | - | chr8.4:35417442-35417461 | None:intergenic | 55.0% | |
| TTCGTCTGCCATCTCCAGTG+CGG | + | chr8.4:35417141-35417160 | MS.gene038430:CDS | 55.0% | |
| ! | TCGTCTGAGTTGGATTCCGG+AGG | + | chr8.4:35415575-35415594 | MS.gene038430:CDS | 55.0% |
| CCAAGTCCCCCACTCTTCCC+AGG | - | chr8.4:35415252-35415271 | None:intergenic | 65.0% | |
| CCTGGGAAGAGTGGGGGACT+TGG | + | chr8.4:35415249-35415268 | MS.gene038430:CDS | 65.0% | |
| CGGTGACTTCCCCGCCACAA+AGG | - | chr8.4:35413780-35413799 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 35412996 | 35417485 | 35412996 | ID=MS.gene038430 |
| chr8.4 | mRNA | 35412996 | 35417485 | 35412996 | ID=MS.gene038430.t1;Parent=MS.gene038430 |
| chr8.4 | exon | 35412996 | 35413064 | 35412996 | ID=MS.gene038430.t1.exon1;Parent=MS.gene038430.t1 |
| chr8.4 | CDS | 35412996 | 35413064 | 35412996 | ID=cds.MS.gene038430.t1;Parent=MS.gene038430.t1 |
| chr8.4 | exon | 35413226 | 35413344 | 35413226 | ID=MS.gene038430.t1.exon2;Parent=MS.gene038430.t1 |
| chr8.4 | CDS | 35413226 | 35413344 | 35413226 | ID=cds.MS.gene038430.t1;Parent=MS.gene038430.t1 |
| chr8.4 | exon | 35414870 | 35415293 | 35414870 | ID=MS.gene038430.t1.exon3;Parent=MS.gene038430.t1 |
| chr8.4 | CDS | 35414870 | 35415293 | 35414870 | ID=cds.MS.gene038430.t1;Parent=MS.gene038430.t1 |
| chr8.4 | exon | 35415449 | 35415709 | 35415449 | ID=MS.gene038430.t1.exon4;Parent=MS.gene038430.t1 |
| chr8.4 | CDS | 35415449 | 35415709 | 35415449 | ID=cds.MS.gene038430.t1;Parent=MS.gene038430.t1 |
| chr8.4 | exon | 35416490 | 35416615 | 35416490 | ID=MS.gene038430.t1.exon5;Parent=MS.gene038430.t1 |
| chr8.4 | CDS | 35416490 | 35416615 | 35416490 | ID=cds.MS.gene038430.t1;Parent=MS.gene038430.t1 |
| chr8.4 | exon | 35417139 | 35417237 | 35417139 | ID=MS.gene038430.t1.exon6;Parent=MS.gene038430.t1 |
| chr8.4 | CDS | 35417139 | 35417237 | 35417139 | ID=cds.MS.gene038430.t1;Parent=MS.gene038430.t1 |
| chr8.4 | exon | 35417378 | 35417485 | 35417378 | ID=MS.gene038430.t1.exon7;Parent=MS.gene038430.t1 |
| chr8.4 | CDS | 35417378 | 35417485 | 35417378 | ID=cds.MS.gene038430.t1;Parent=MS.gene038430.t1 |
| Gene Sequence |
| Protein sequence |
