Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048438.t1 | XP_027192907.1 | 77.2 | 369 | 69 | 2 | 1 | 354 | 24 | 392 | 2.10E-129 | 472.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048438.t1 | Q8H100 | 61.8 | 288 | 82 | 6 | 1 | 263 | 27 | 311 | 3.5e-85 | 316.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048438.t1 | A0A3Q7YE58 | 77.2 | 369 | 69 | 2 | 1 | 354 | 24 | 392 | 1.5e-129 | 472.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene048438 | MS.gene75024 | PPI |
| MS.gene038430 | MS.gene048438 | PPI |
| MS.gene049052 | MS.gene048438 | PPI |
| MS.gene048438 | MS.gene05967 | PPI |
| MS.gene048438 | MS.gene65987 | PPI |
| MS.gene048438 | MS.gene66388 | PPI |
| MS.gene048438 | MS.gene015841 | PPI |
| MS.gene030337 | MS.gene048438 | PPI |
| MS.gene20137 | MS.gene048438 | PPI |
| MS.gene048438 | MS.gene063343 | PPI |
| MS.gene71181 | MS.gene048438 | PPI |
| MS.gene048438 | MS.gene008993 | PPI |
| MS.gene048438 | MS.gene65986 | PPI |
| MS.gene048438 | MS.gene049051 | PPI |
| MS.gene048438 | MS.gene008994 | PPI |
| MS.gene048438 | MS.gene048437 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048438.t1 | MTR_8g067090 | 89.124 | 331 | 22 | 1 | 1 | 317 | 24 | 354 | 0.0 | 545 |
| MS.gene048438.t1 | MTR_8g471120 | 89.124 | 331 | 22 | 1 | 1 | 317 | 24 | 354 | 0.0 | 545 |
| MS.gene048438.t1 | MTR_8g067080 | 66.038 | 371 | 96 | 9 | 2 | 346 | 25 | 391 | 2.83e-157 | 447 |
| MS.gene048438.t1 | MTR_8g471110 | 66.038 | 371 | 96 | 9 | 2 | 346 | 25 | 391 | 2.83e-157 | 447 |
| MS.gene048438.t1 | MTR_8g067080 | 66.125 | 369 | 97 | 9 | 2 | 346 | 25 | 389 | 3.92e-156 | 444 |
| MS.gene048438.t1 | MTR_7g099830 | 42.276 | 123 | 66 | 1 | 1 | 123 | 18 | 135 | 2.95e-28 | 114 |
| MS.gene048438.t1 | MTR_1g069000 | 40.323 | 124 | 67 | 2 | 1 | 122 | 18 | 136 | 3.11e-25 | 106 |
| MS.gene048438.t1 | MTR_6g080710 | 42.975 | 121 | 60 | 2 | 2 | 113 | 31 | 151 | 1.50e-22 | 95.9 |
| MS.gene048438.t1 | MTR_8g464390 | 36.527 | 167 | 78 | 5 | 2 | 141 | 31 | 196 | 1.10e-21 | 96.3 |
| MS.gene048438.t1 | MTR_2g080950 | 33.987 | 153 | 84 | 4 | 2 | 146 | 31 | 174 | 1.82e-20 | 92.4 |
| MS.gene048438.t1 | MTR_3g017500 | 55.000 | 60 | 26 | 1 | 2 | 60 | 36 | 95 | 1.45e-16 | 80.5 |
| MS.gene048438.t1 | MTR_3g017500 | 55.000 | 60 | 26 | 1 | 2 | 60 | 66 | 125 | 2.67e-16 | 79.7 |
| MS.gene048438.t1 | MTR_2g030230 | 41.111 | 90 | 48 | 3 | 1 | 86 | 32 | 120 | 2.85e-15 | 76.3 |
| MS.gene048438.t1 | MTR_8g038400 | 51.667 | 60 | 28 | 1 | 2 | 60 | 32 | 91 | 5.32e-15 | 75.9 |
| MS.gene048438.t1 | MTR_8g088320 | 39.326 | 89 | 49 | 3 | 2 | 86 | 24 | 111 | 4.01e-14 | 72.8 |
| MS.gene048438.t1 | MTR_4g074170 | 35.484 | 124 | 70 | 4 | 2 | 115 | 494 | 617 | 8.97e-14 | 72.8 |
| MS.gene048438.t1 | MTR_7g020860 | 48.438 | 64 | 31 | 1 | 2 | 63 | 517 | 580 | 5.93e-13 | 70.5 |
| MS.gene048438.t1 | MTR_7g020860 | 48.438 | 64 | 31 | 1 | 2 | 63 | 517 | 580 | 5.95e-13 | 70.5 |
| MS.gene048438.t1 | MTR_8g100100 | 50.000 | 64 | 30 | 1 | 2 | 63 | 515 | 578 | 2.90e-12 | 68.2 |
| MS.gene048438.t1 | MTR_8g100100 | 50.000 | 64 | 30 | 1 | 2 | 63 | 509 | 572 | 2.92e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048438.t1 | AT4G17890 | 61.364 | 352 | 108 | 6 | 1 | 327 | 27 | 375 | 1.30e-142 | 409 |
| MS.gene048438.t1 | AT4G17890 | 61.364 | 352 | 108 | 6 | 1 | 327 | 27 | 375 | 1.87e-142 | 410 |
| MS.gene048438.t1 | AT5G46750 | 57.880 | 349 | 117 | 7 | 1 | 327 | 24 | 364 | 1.28e-129 | 377 |
| MS.gene048438.t1 | AT2G35210 | 59.587 | 339 | 110 | 8 | 1 | 319 | 24 | 355 | 3.80e-121 | 355 |
| MS.gene048438.t1 | AT2G35210 | 56.215 | 354 | 127 | 8 | 1 | 334 | 24 | 369 | 4.42e-117 | 344 |
| MS.gene048438.t1 | AT3G53710 | 45.082 | 122 | 62 | 1 | 1 | 122 | 18 | 134 | 3.95e-29 | 117 |
| MS.gene048438.t1 | AT3G53710 | 45.082 | 122 | 62 | 1 | 1 | 122 | 18 | 134 | 3.95e-29 | 117 |
| MS.gene048438.t1 | AT3G53710 | 45.082 | 122 | 62 | 1 | 1 | 122 | 18 | 134 | 3.95e-29 | 117 |
| MS.gene048438.t1 | AT2G37550 | 44.167 | 120 | 62 | 1 | 1 | 120 | 18 | 132 | 4.62e-29 | 117 |
| MS.gene048438.t1 | AT2G37550 | 44.167 | 120 | 62 | 1 | 1 | 120 | 18 | 132 | 4.62e-29 | 117 |
| MS.gene048438.t1 | AT5G54310 | 55.224 | 67 | 30 | 0 | 2 | 68 | 31 | 97 | 4.55e-21 | 94.4 |
| MS.gene048438.t1 | AT3G17660 | 52.239 | 67 | 32 | 0 | 2 | 68 | 31 | 97 | 1.96e-20 | 88.2 |
| MS.gene048438.t1 | AT3G17660 | 52.239 | 67 | 32 | 0 | 2 | 68 | 31 | 97 | 4.98e-20 | 88.2 |
| MS.gene048438.t1 | AT3G17660 | 52.239 | 67 | 32 | 0 | 2 | 68 | 31 | 97 | 1.55e-19 | 87.0 |
| MS.gene048438.t1 | AT3G07940 | 53.333 | 60 | 27 | 1 | 2 | 60 | 62 | 121 | 2.09e-16 | 78.6 |
| MS.gene048438.t1 | AT3G07940 | 53.333 | 60 | 27 | 1 | 2 | 60 | 62 | 121 | 3.47e-16 | 79.3 |
| MS.gene048438.t1 | AT4G05330 | 43.478 | 69 | 38 | 1 | 1 | 68 | 29 | 97 | 1.38e-14 | 74.3 |
| MS.gene048438.t1 | AT4G05330 | 43.478 | 69 | 38 | 1 | 1 | 68 | 29 | 97 | 1.38e-14 | 74.3 |
| MS.gene048438.t1 | AT4G21160 | 43.478 | 69 | 38 | 1 | 1 | 68 | 29 | 97 | 1.99e-14 | 73.9 |
| MS.gene048438.t1 | AT4G21160 | 43.478 | 69 | 38 | 1 | 1 | 68 | 29 | 97 | 1.99e-14 | 73.9 |
| MS.gene048438.t1 | AT4G21160 | 43.478 | 69 | 38 | 1 | 1 | 68 | 29 | 97 | 1.99e-14 | 73.9 |
| MS.gene048438.t1 | AT4G21160 | 43.478 | 69 | 38 | 1 | 1 | 68 | 29 | 97 | 1.99e-14 | 73.9 |
| MS.gene048438.t1 | AT4G16220 | 57.353 | 68 | 23 | 2 | 41 | 105 | 121 | 185 | 3.66e-14 | 71.6 |
| MS.gene048438.t1 | AT1G60860 | 50.820 | 61 | 28 | 1 | 2 | 60 | 482 | 542 | 1.58e-13 | 72.4 |
| MS.gene048438.t1 | AT1G60860 | 50.820 | 61 | 28 | 1 | 2 | 60 | 371 | 431 | 1.63e-13 | 72.0 |
| MS.gene048438.t1 | AT1G60860 | 50.820 | 61 | 28 | 1 | 2 | 60 | 311 | 371 | 2.05e-13 | 71.6 |
| MS.gene048438.t1 | AT5G13300 | 44.286 | 70 | 37 | 1 | 2 | 69 | 516 | 585 | 3.24e-13 | 71.2 |
| MS.gene048438.t1 | AT1G10870 | 52.459 | 61 | 27 | 1 | 2 | 60 | 482 | 542 | 3.75e-13 | 71.2 |
| MS.gene048438.t1 | AT1G10870 | 52.459 | 61 | 27 | 1 | 2 | 60 | 482 | 542 | 4.07e-13 | 70.9 |
| MS.gene048438.t1 | AT5G61980 | 49.180 | 61 | 29 | 1 | 2 | 60 | 513 | 573 | 4.99e-13 | 70.9 |
| MS.gene048438.t1 | AT3G17660 | 66.667 | 36 | 12 | 0 | 2 | 37 | 31 | 66 | 1.54e-11 | 63.9 |
Find 61 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCATCTCTTGCTTTGTTC+TGG | 0.224885 | 8.3:+35862468 | None:intergenic |
| ACTGGAGCAGGTGGTTCTTC+AGG | 0.274169 | 8.3:+35863551 | None:intergenic |
| GTTGCTTATCAGAGTTCTAA+TGG | 0.323772 | 8.3:-35863939 | MS.gene048438:CDS |
| CAGAGTTCTAATGGACTTCC+TGG | 0.349310 | 8.3:-35863930 | MS.gene048438:CDS |
| TCTCTCCTGCAATGTTCTTA+AGG | 0.357125 | 8.3:+35861672 | None:intergenic |
| CAGTCGTCTGAGTTGGATTC+CGG | 0.360915 | 8.3:-35863455 | MS.gene048438:CDS |
| TCTTCCCTTAAGAACATTGC+AGG | 0.374215 | 8.3:-35861677 | MS.gene048438:CDS |
| AAGAACATTGCAGGAGAGAC+TGG | 0.375056 | 8.3:-35861668 | MS.gene048438:CDS |
| AATAATTTAAAGAAGTCTAT+TGG | 0.381488 | 8.3:-35863810 | MS.gene048438:CDS |
| ACTTCTTTGCAGACTTTGAA+TGG | 0.382724 | 8.3:-35863388 | MS.gene048438:CDS |
| TTACCTTCTTATTGAGCTTA+CGG | 0.385740 | 8.3:+35863751 | None:intergenic |
| CTTGTACAACTCTGCAGCCC+TGG | 0.387896 | 8.3:+35864025 | None:intergenic |
| CTCTCCTGCAATGTTCTTAA+GGG | 0.388884 | 8.3:+35861673 | None:intergenic |
| TACCTTCTTATTGAGCTTAC+GGG | 0.406262 | 8.3:+35863752 | None:intergenic |
| TTGTTTGTCGTGGATGGAAC+TGG | 0.430685 | 8.3:+35863533 | None:intergenic |
| ACCTCATTGGTCCTGACGCC+AGG | 0.442116 | 8.3:+35863912 | None:intergenic |
| TGCAGACTTTGAATGGATAG+TGG | 0.443474 | 8.3:-35863381 | MS.gene048438:intron |
| CTAATGGACTTCCTGGCGTC+AGG | 0.450431 | 8.3:-35863923 | MS.gene048438:CDS |
| ATTGAATGTATTTGAACCTC+CGG | 0.459068 | 8.3:+35863436 | None:intergenic |
| GAAGGAAGTAGCTAAAAGTA+TGG | 0.460701 | 8.3:-35863991 | MS.gene048438:CDS |
| TCAAAACGAGAAGTCATAGA+TGG | 0.464553 | 8.3:+35863494 | None:intergenic |
| TTAGAACTCTGATAAGCAAC+AGG | 0.481375 | 8.3:+35863942 | None:intergenic |
| TAGAAGCAAAGTATACATCC+AGG | 0.500546 | 8.3:-35864043 | MS.gene048438:CDS |
| CAAGATCAATGAGGAATCTC+CGG | 0.502585 | 8.3:+35861890 | None:intergenic |
| ACGAGAAGTCATAGATGGCC+TGG | 0.509294 | 8.3:+35863499 | None:intergenic |
| ACATGGGCGTCAGTAACGTA+TGG | 0.518284 | 8.3:-35865727 | MS.gene048438:CDS |
| AAAAGTATGGCTGAAGAGAA+AGG | 0.520493 | 8.3:-35863978 | MS.gene048438:CDS |
| TGATAAGCAACAGGTGATGA+AGG | 0.530089 | 8.3:+35863951 | None:intergenic |
| GATCTACAAACTTAGACTCA+TGG | 0.530785 | 8.3:-35864157 | MS.gene048438:CDS |
| AAGCAACATGGTTGGACCGA+TGG | 0.531171 | 8.3:-35864074 | MS.gene048438:CDS |
| ACATTGTTGTTTGTCGTGGA+TGG | 0.534249 | 8.3:+35863527 | None:intergenic |
| CGGAATCCAACTCAGACGAC+TGG | 0.539405 | 8.3:+35863456 | None:intergenic |
| TGTCATCAAGGAGGAGGCCA+AGG | 0.539734 | 8.3:+35861631 | None:intergenic |
| CAAACAACAATGTGTCTGCC+AGG | 0.547869 | 8.3:-35863517 | MS.gene048438:CDS |
| TCTGCCGTTCATCGAAGTCT+CGG | 0.549396 | 8.3:-35865682 | MS.gene048438:CDS |
| GTCGTGGATGGAACTGGAGC+AGG | 0.550054 | 8.3:+35863539 | None:intergenic |
| GCAAAGAAGTTTGATGACTT+CGG | 0.551658 | 8.3:+35863401 | None:intergenic |
| TACGTTACTGACGCCCATGT+TGG | 0.552830 | 8.3:+35865730 | None:intergenic |
| TAATGTCCAGTCGTCTGAGT+TGG | 0.557059 | 8.3:-35863462 | MS.gene048438:CDS |
| GTACAAGCAAATTCTTGCGA+AGG | 0.584924 | 8.3:-35864009 | MS.gene048438:CDS |
| AAGATCTGTCATCAAGGAGG+AGG | 0.586831 | 8.3:+35861625 | None:intergenic |
| AGACACATTGTTGTTTGTCG+TGG | 0.586871 | 8.3:+35863523 | None:intergenic |
| TGCCCGTAAGCTCAATAAGA+AGG | 0.587772 | 8.3:-35863754 | MS.gene048438:intron |
| AATTTAAAGAAGTCTATTGG+TGG | 0.593349 | 8.3:-35863807 | MS.gene048438:CDS |
| AGAACATTGCAGGAGAGACT+GGG | 0.594396 | 8.3:-35861667 | MS.gene048438:CDS |
| GAAAGAAAACACATTAGAGA+AGG | 0.594618 | 8.3:-35863886 | MS.gene048438:CDS |
| CAACATGGTTGGACCGATGG+TGG | 0.600620 | 8.3:-35864071 | MS.gene048438:CDS |
| CATGGGCGTCAGTAACGTAT+GGG | 0.603242 | 8.3:-35865726 | MS.gene048438:CDS |
| TCGTCTGAGTTGGATTCCGG+AGG | 0.612556 | 8.3:-35863452 | MS.gene048438:CDS |
| ACTATTGTATGTGAAGCTCT+AGG | 0.615770 | 8.3:+35863837 | None:intergenic |
| AGAAGCAAAGTATACATCCA+GGG | 0.624009 | 8.3:-35864042 | MS.gene048438:CDS |
| TGCTCATAGAGAGACTCACT+TGG | 0.640748 | 8.3:+35863578 | None:intergenic |
| AACACCGAGACTTCGATGAA+CGG | 0.641366 | 8.3:+35865678 | None:intergenic |
| CGGCAGAACAATCAATGCAG+AGG | 0.642639 | 8.3:+35865698 | None:intergenic |
| GCAATACGAAGAATCCAACA+TGG | 0.667289 | 8.3:-35865744 | MS.gene048438:CDS |
| CGCTAGCAGCAAGATCAATG+AGG | 0.677704 | 8.3:+35861881 | None:intergenic |
| GTGGATGGAACTGGAGCAGG+TGG | 0.679612 | 8.3:+35863542 | None:intergenic |
| TTCGTCTGCCATCTCCAGTG+CGG | 0.684569 | 8.3:-35861928 | MS.gene048438:CDS |
| CAATACGAAGAATCCAACAT+GGG | 0.708002 | 8.3:-35865743 | MS.gene048438:CDS |
| CTGAAGATCTGTCATCAAGG+AGG | 0.712381 | 8.3:+35861622 | None:intergenic |
| TCCTGGCGTCAGGACCAATG+AGG | 0.713723 | 8.3:-35863913 | MS.gene048438:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATAAAATATGTAATGA+TGG | - | chr8.3:35861985-35862004 | MS.gene048438:intron | 10.0% |
| !! | ATCAATATTATATTAGAATT+AGG | - | chr8.3:35862756-35862775 | MS.gene048438:intron | 10.0% |
| !! | TATTATTTGATATGAAAATT+AGG | - | chr8.3:35865344-35865363 | MS.gene048438:intron | 10.0% |
| !! | AATAAAAATAAATAAGTGCA+TGG | + | chr8.3:35864813-35864832 | None:intergenic | 15.0% |
| !! | AATAATTTAAAGAAGTCTAT+TGG | - | chr8.3:35863583-35863602 | MS.gene048438:intron | 15.0% |
| !! | ATAATAACAATATTAAGGTA+TGG | - | chr8.3:35864474-35864493 | MS.gene048438:intron | 15.0% |
| !! | TAAAAAATATACTAAACTCA+CGG | + | chr8.3:35862210-35862229 | None:intergenic | 15.0% |
| !! | TAATGTCACATTAAAATTTA+GGG | + | chr8.3:35864343-35864362 | None:intergenic | 15.0% |
| !! | TGTCTAATTTATCATTTAAA+TGG | - | chr8.3:35862609-35862628 | MS.gene048438:intron | 15.0% |
| !! | TTAATGTCACATTAAAATTT+AGG | + | chr8.3:35864344-35864363 | None:intergenic | 15.0% |
| !!! | ATAATTTTCCTTAAGAAATT+TGG | + | chr8.3:35865327-35865346 | None:intergenic | 15.0% |
| !!! | GTATTTTTTTTTTTGTATAC+CGG | - | chr8.3:35863704-35863723 | MS.gene048438:intron | 15.0% |
| !!! | TTTCCTTAATTAATTTTACT+AGG | - | chr8.3:35863016-35863035 | MS.gene048438:intron | 15.0% |
| !!! | TTTTTCTTTCAAAAATTTGT+CGG | - | chr8.3:35864316-35864335 | MS.gene048438:intron | 15.0% |
| !! | AATTTCTTAGAGATGAATTT+AGG | + | chr8.3:35865112-35865131 | None:intergenic | 20.0% |
| !! | ACTAATATAATTGGCATTTA+TGG | - | chr8.3:35865244-35865263 | MS.gene048438:intron | 20.0% |
| !! | ATCAATATTATATTAGAACC+AGG | - | chr8.3:35862700-35862719 | MS.gene048438:intron | 20.0% |
| !! | ATTTCTTAGAGATGAATTTA+GGG | + | chr8.3:35865111-35865130 | None:intergenic | 20.0% |
| !! | CGAAAAATGACTAATATAAT+TGG | - | chr8.3:35865235-35865254 | MS.gene048438:intron | 20.0% |
| !! | GATCCAAAAAAAAAAAGATA+TGG | - | chr8.3:35864657-35864676 | MS.gene048438:intron | 20.0% |
| !! | GTGCTATAATAACAATATTA+AGG | - | chr8.3:35864469-35864488 | MS.gene048438:intron | 20.0% |
| !! | TATAAAATATGTAATGATGG+TGG | - | chr8.3:35861988-35862007 | MS.gene048438:intron | 20.0% |
| !! | TCAAAGGGTTATATAATAAA+AGG | - | chr8.3:35864253-35864272 | MS.gene048438:intron | 20.0% |
| !! | TGAAATCATTGAAAAATTCT+AGG | - | chr8.3:35864559-35864578 | MS.gene048438:intron | 20.0% |
| !! | TGATTAATGAAAAACACAAA+AGG | + | chr8.3:35862684-35862703 | None:intergenic | 20.0% |
| !! | TGTATAAATATCAAACTGAA+CGG | + | chr8.3:35862322-35862341 | None:intergenic | 20.0% |
| !!! | ACTCCATATCTTTTTTTTTT+TGG | + | chr8.3:35864663-35864682 | None:intergenic | 20.0% |
| !!! | ATCTCTAAGAAATTTTTTCA+TGG | - | chr8.3:35865118-35865137 | MS.gene048438:intron | 20.0% |
| !!! | ATCTTTTTTTTTTTGGATCA+TGG | + | chr8.3:35864656-35864675 | None:intergenic | 20.0% |
| !!! | ATGTAGTTTTTGTTTGAAAA+GGG | - | chr8.3:35861938-35861957 | MS.gene048438:intron | 20.0% |
| !!! | ATTTTATGAGAAAGATGAAA+GGG | - | chr8.3:35862233-35862252 | MS.gene048438:intron | 20.0% |
| !!! | CAACTAAAAATAATGAGTTT+TGG | - | chr8.3:35863268-35863287 | MS.gene048438:intron | 20.0% |
| !!! | GAATAATGGTAATGAAATTA+GGG | + | chr8.3:35865609-35865628 | None:intergenic | 20.0% |
| !!! | TAAAACATATCTTCTAGTTT+TGG | + | chr8.3:35864411-35864430 | None:intergenic | 20.0% |
| !!! | TAGAAGATATGTTTTAACAA+AGG | - | chr8.3:35864415-35864434 | MS.gene048438:intron | 20.0% |
| !!! | TAGTGCATTAATTTGTATTA+TGG | - | chr8.3:35862025-35862044 | MS.gene048438:intron | 20.0% |
| !!! | TATGTAGTTTTTGTTTGAAA+AGG | - | chr8.3:35861937-35861956 | MS.gene048438:intron | 20.0% |
| !!! | TATTTTATGAGAAAGATGAA+AGG | - | chr8.3:35862232-35862251 | MS.gene048438:intron | 20.0% |
| !!! | TCTAGTTTTGGTAATTAAAT+TGG | + | chr8.3:35864399-35864418 | None:intergenic | 20.0% |
| !!! | TGAATAATGGTAATGAAATT+AGG | + | chr8.3:35865610-35865629 | None:intergenic | 20.0% |
| ! | AATTAGGATTGAAAGATGAT+TGG | - | chr8.3:35862772-35862791 | MS.gene048438:intron | 25.0% |
| ! | AATTTAAAGAAGTCTATTGG+TGG | - | chr8.3:35863586-35863605 | MS.gene048438:intron | 25.0% |
| ! | ACCATAAAATTAATTCAGGA+AGG | + | chr8.3:35864372-35864391 | None:intergenic | 25.0% |
| ! | ATTTGACACCAAATTTCTTA+AGG | - | chr8.3:35865316-35865335 | MS.gene048438:intron | 25.0% |
| ! | CAAAATTTCACTCAATTAAG+AGG | - | chr8.3:35862929-35862948 | MS.gene048438:intron | 25.0% |
| ! | CACAACCATAAAATTAATTC+AGG | + | chr8.3:35864376-35864395 | None:intergenic | 25.0% |
| ! | CAGCCTAGTAAAATTAATTA+AGG | + | chr8.3:35863022-35863041 | None:intergenic | 25.0% |
| ! | GCAGTAAAATACTATAAGAA+AGG | + | chr8.3:35864988-35865007 | None:intergenic | 25.0% |
| ! | GTTTCTATATCAATAACGAA+AGG | + | chr8.3:35865569-35865588 | None:intergenic | 25.0% |
| ! | TTAATTGAGAAAAGAAACTG+AGG | + | chr8.3:35863080-35863099 | None:intergenic | 25.0% |
| ! | TTAGAAGTTCTTATACAACA+TGG | + | chr8.3:35862833-35862852 | None:intergenic | 25.0% |
| ! | TTATTGATATAGAAACGTCA+TGG | - | chr8.3:35865573-35865592 | MS.gene048438:intron | 25.0% |
| ! | TTCGAGATTATTGTATTTAG+TGG | + | chr8.3:35865219-35865238 | None:intergenic | 25.0% |
| ! | TTGTAGATCTACATAACAAA+AGG | + | chr8.3:35863225-35863244 | None:intergenic | 25.0% |
| ! | TTTCTTAGAGATGAATTTAG+GGG | + | chr8.3:35865110-35865129 | None:intergenic | 25.0% |
| !! | ACCTTCCTGAATTAATTTTA+TGG | - | chr8.3:35864368-35864387 | MS.gene048438:intron | 25.0% |
| !! | ATCTTGTTATAACTTTGAAC+TGG | + | chr8.3:35864194-35864213 | None:intergenic | 25.0% |
| !! | ATTTCGTCATCTCAATTTTT+CGG | - | chr8.3:35864899-35864918 | MS.gene048438:intron | 25.0% |
| !! | CAAATTTTCTTTAAGCAACA+TGG | - | chr8.3:35863307-35863326 | MS.gene048438:intron | 25.0% |
| !! | CTTAATTAATTTTACTAGGC+TGG | - | chr8.3:35863020-35863039 | MS.gene048438:intron | 25.0% |
| !! | GGTAAAATGATTTTGTGATT+AGG | - | chr8.3:35861959-35861978 | MS.gene048438:intron | 25.0% |
| !! | TACAAAGAAAATTAGCTCTT+TGG | + | chr8.3:35865372-35865391 | None:intergenic | 25.0% |
| !! | TTTTGTCATGTATAAGATTG+AGG | - | chr8.3:35864835-35864854 | MS.gene048438:intron | 25.0% |
| !!! | CTAAAAATAATGAGTTTTGG+AGG | - | chr8.3:35863271-35863290 | MS.gene048438:intron | 25.0% |
| AAACAAACTTAAGACTCAAC+CGG | - | chr8.3:35864587-35864606 | MS.gene048438:intron | 30.0% | |
| AATACGATTCGAAAGAAACA+GGG | + | chr8.3:35865050-35865069 | None:intergenic | 30.0% | |
| ACTAATATGACAGGTATTCT+AGG | + | chr8.3:35865190-35865209 | None:intergenic | 30.0% | |
| AGAGGAATTGATAGAATAGA+AGG | - | chr8.3:35863169-35863188 | MS.gene048438:intron | 30.0% | |
| ATAAATAAGTGCATGGCAAA+AGG | + | chr8.3:35864806-35864825 | None:intergenic | 30.0% | |
| ATTGAATGTATTTGAACCTC+CGG | + | chr8.3:35863960-35863979 | None:intergenic | 30.0% | |
| CTTTCATATGAGTATATGTC+AGG | - | chr8.3:35862973-35862992 | MS.gene048438:intron | 30.0% | |
| GAAAGAAAACACATTAGAGA+AGG | - | chr8.3:35863507-35863526 | MS.gene048438:CDS | 30.0% | |
| GAATTGAAACGGTTACAATT+TGG | - | chr8.3:35861871-35861890 | MS.gene048438:CDS | 30.0% | |
| GGATCATTTAGGAAAAGTAA+TGG | - | chr8.3:35862573-35862592 | MS.gene048438:intron | 30.0% | |
| GTATTTGACCCAAATTTCTT+CGG | + | chr8.3:35864042-35864061 | None:intergenic | 30.0% | |
| TATTTGACCCAAATTTCTTC+GGG | + | chr8.3:35864041-35864060 | None:intergenic | 30.0% | |
| TCATTTAGGAAAAGTAATGG+TGG | - | chr8.3:35862576-35862595 | MS.gene048438:intron | 30.0% | |
| TGATAGACAAGATGAGATAA+AGG | - | chr8.3:35862259-35862278 | MS.gene048438:intron | 30.0% | |
| TGGTTGAAAACTAATATGAC+AGG | + | chr8.3:35865199-35865218 | None:intergenic | 30.0% | |
| TGTATTATGGATGTAGACAT+GGG | - | chr8.3:35862038-35862057 | MS.gene048438:intron | 30.0% | |
| TTACCTTCTTATTGAGCTTA+CGG | + | chr8.3:35863645-35863664 | None:intergenic | 30.0% | |
| TTAGCTAAACTGGATCATTT+AGG | - | chr8.3:35862562-35862581 | MS.gene048438:intron | 30.0% | |
| TTCTTGAATTGATGTCTGAT+GGG | - | chr8.3:35865637-35865656 | MS.gene048438:intron | 30.0% | |
| TTGATAGAATAGAAGGAAGA+AGG | - | chr8.3:35863176-35863195 | MS.gene048438:intron | 30.0% | |
| TTGTATTATGGATGTAGACA+TGG | - | chr8.3:35862037-35862056 | MS.gene048438:intron | 30.0% | |
| ! | AAATTGATTCTATGCCTTTG+TGG | - | chr8.3:35862173-35862192 | MS.gene048438:intron | 30.0% |
| ! | CAAATCTAAATAGTCTTGCT+TGG | + | chr8.3:35864723-35864742 | None:intergenic | 30.0% |
| ! | CATCAATCGATTATCTTTTC+AGG | - | chr8.3:35865539-35865558 | MS.gene048438:intron | 30.0% |
| ! | CTACATAACAAAAGGCATAT+AGG | + | chr8.3:35863217-35863236 | None:intergenic | 30.0% |
| ! | GGGATTTTCTTGAATTGAAA+CGG | - | chr8.3:35861860-35861879 | MS.gene048438:CDS | 30.0% |
| ! | TTTTCTTTAAGCAACATGGT+TGG | - | chr8.3:35863311-35863330 | MS.gene048438:intron | 30.0% |
| !! | AATCGTATTCTTTTGATTGC+TGG | - | chr8.3:35865061-35865080 | MS.gene048438:intron | 30.0% |
| !! | AATTTGGTTTGAATAGTCGA+TGG | - | chr8.3:35861887-35861906 | MS.gene048438:CDS | 30.0% |
| !! | GTTGTGGGTTTTGTAATTAT+TGG | - | chr8.3:35862073-35862092 | MS.gene048438:intron | 30.0% |
| !!! | CTCATTATTTTTAGTTGCTC+AGG | + | chr8.3:35863265-35863284 | None:intergenic | 30.0% |
| !!! | GGGTTTCAATTTTTTGTTGT+GGG | - | chr8.3:35862058-35862077 | MS.gene048438:intron | 30.0% |
| !!! | GTGTTCATATTAGTTTTGTG+AGG | - | chr8.3:35861733-35861752 | MS.gene048438:intron | 30.0% |
| !!! | TACTCTGATTTTAGCTAAAC+TGG | - | chr8.3:35862552-35862571 | MS.gene048438:intron | 30.0% |
| !!! | TGGGTTTCAATTTTTTGTTG+TGG | - | chr8.3:35862057-35862076 | MS.gene048438:intron | 30.0% |
| AAAGGTAGCATATCTGTGTT+GGG | - | chr8.3:35862277-35862296 | MS.gene048438:intron | 35.0% | |
| AATAGTTGAGCTCAGTAGAA+AGG | - | chr8.3:35863668-35863687 | MS.gene048438:intron | 35.0% | |
| ACCTCTACAAAAATCAACCA+TGG | - | chr8.3:35864612-35864631 | MS.gene048438:intron | 35.0% | |
| ACTATTGTATGTGAAGCTCT+AGG | + | chr8.3:35863559-35863578 | None:intergenic | 35.0% | |
| ACTTCTTTGCAGACTTTGAA+TGG | - | chr8.3:35864005-35864024 | MS.gene048438:CDS | 35.0% | |
| AGAAGCAAAGTATACATCCA+GGG | - | chr8.3:35863351-35863370 | MS.gene048438:intron | 35.0% | |
| AGAGCAATGCTTTGTGATTA+GGG | - | chr8.3:35861840-35861859 | MS.gene048438:intron | 35.0% | |
| AGCTAAAATCAGAGTAACTG+AGG | + | chr8.3:35862548-35862567 | None:intergenic | 35.0% | |
| AGTTGCACTATACAAAACAG+AGG | + | chr8.3:35864097-35864116 | None:intergenic | 35.0% | |
| ATACGATTCGAAAGAAACAG+GGG | + | chr8.3:35865049-35865068 | None:intergenic | 35.0% | |
| CAAATCCATCATGCAAAACA+TGG | - | chr8.3:35864215-35864234 | MS.gene048438:intron | 35.0% | |
| CAATACGAAGAATCCAACAT+GGG | - | chr8.3:35861650-35861669 | MS.gene048438:CDS | 35.0% | |
| CTATACAAAACAGAGGTTGA+TGG | + | chr8.3:35864090-35864109 | None:intergenic | 35.0% | |
| GAAGACAAAAATAACCCAAC+AGG | + | chr8.3:35863735-35863754 | None:intergenic | 35.0% | |
| GAAGGAAGTAGCTAAAAGTA+TGG | - | chr8.3:35863402-35863421 | MS.gene048438:CDS | 35.0% | |
| GAATACGATTCGAAAGAAAC+AGG | + | chr8.3:35865051-35865070 | None:intergenic | 35.0% | |
| GATCTACAAACTTAGACTCA+TGG | - | chr8.3:35863236-35863255 | MS.gene048438:intron | 35.0% | |
| GTTCTTGAATTGATGTCTGA+TGG | - | chr8.3:35865636-35865655 | MS.gene048438:intron | 35.0% | |
| GTTTGAATAGTCGATGGAAT+TGG | - | chr8.3:35861893-35861912 | MS.gene048438:CDS | 35.0% | |
| TAAAGGTAGCATATCTGTGT+TGG | - | chr8.3:35862276-35862295 | MS.gene048438:intron | 35.0% | |
| TACCTTCTTATTGAGCTTAC+GGG | + | chr8.3:35863644-35863663 | None:intergenic | 35.0% | |
| TAGAAGCAAAGTATACATCC+AGG | - | chr8.3:35863350-35863369 | MS.gene048438:intron | 35.0% | |
| TAGAGCAATGCTTTGTGATT+AGG | - | chr8.3:35861839-35861858 | MS.gene048438:intron | 35.0% | |
| TCAAAACGAGAAGTCATAGA+TGG | + | chr8.3:35863902-35863921 | None:intergenic | 35.0% | |
| TTAGAACTCTGATAAGCAAC+AGG | + | chr8.3:35863454-35863473 | None:intergenic | 35.0% | |
| TTATGGTTCTTTAGCGACTA+GGG | - | chr8.3:35865261-35865280 | MS.gene048438:intron | 35.0% | |
| TTGCACTACAATCAATAGAG+AGG | - | chr8.3:35863151-35863170 | MS.gene048438:intron | 35.0% | |
| TTTATGGTTCTTTAGCGACT+AGG | - | chr8.3:35865260-35865279 | MS.gene048438:intron | 35.0% | |
| ! | AAAAGTATGGCTGAAGAGAA+AGG | - | chr8.3:35863415-35863434 | MS.gene048438:CDS | 35.0% |
| ! | ATTCAAGAAGCACAACAACA+TGG | + | chr8.3:35862808-35862827 | None:intergenic | 35.0% |
| ! | GCAAAGAAGTTTGATGACTT+CGG | + | chr8.3:35863995-35864014 | None:intergenic | 35.0% |
| ! | GTGGTCAGCTTAAACAATTT+TGG | - | chr8.3:35864127-35864146 | MS.gene048438:CDS | 35.0% |
| ! | GTTGCTTATCAGAGTTCTAA+TGG | - | chr8.3:35863454-35863473 | MS.gene048438:CDS | 35.0% |
| ! | GTTTTCTTTCAGTACCTCAT+TGG | + | chr8.3:35863497-35863516 | None:intergenic | 35.0% |
| ! | TAGTCACTCTTGTTACTTCA+GGG | - | chr8.3:35865442-35865461 | MS.gene048438:intron | 35.0% |
| ! | TGCTTCTATTTTACCACCAT+CGG | + | chr8.3:35863338-35863357 | None:intergenic | 35.0% |
| !! | AAAGTGTTGTGTAACAACCA+TGG | + | chr8.3:35864632-35864651 | None:intergenic | 35.0% |
| !! | ACCATGGTTGATTTTTGTAG+AGG | + | chr8.3:35864616-35864635 | None:intergenic | 35.0% |
| !! | GACTTCTCGTTTTGAATATG+TGG | - | chr8.3:35863907-35863926 | MS.gene048438:CDS | 35.0% |
| !! | TGTCTTACATGGTTTTGCAA+GGG | - | chr8.3:35864499-35864518 | MS.gene048438:intron | 35.0% |
| !!! | CTGCGTCTTTGTTTTATACT+TGG | - | chr8.3:35863115-35863134 | MS.gene048438:intron | 35.0% |
| !!! | TTGATTTTTGTAGAGGTGTC+CGG | + | chr8.3:35864609-35864628 | None:intergenic | 35.0% |
| AAAAAAATCCGCACTGGAGA+TGG | + | chr8.3:35865476-35865495 | None:intergenic | 40.0% | |
| AAGGTAGCATATCTGTGTTG+GGG | - | chr8.3:35862278-35862297 | MS.gene048438:intron | 40.0% | |
| AAGGTATGGTCTGTCTTACA+TGG | - | chr8.3:35864488-35864507 | MS.gene048438:intron | 40.0% | |
| AATCAGGATTGGGAGGAAAA+GGG | + | chr8.3:35865672-35865691 | None:intergenic | 40.0% | |
| AGTGGTTTCCCGAAGAAATT+TGG | - | chr8.3:35864030-35864049 | MS.gene048438:CDS | 40.0% | |
| ATAGTCGATGGAATTGGACT+CGG | - | chr8.3:35861899-35861918 | MS.gene048438:CDS | 40.0% | |
| ATCCATCATGCAAAACATGG+TGG | - | chr8.3:35864218-35864237 | MS.gene048438:intron | 40.0% | |
| CAAGATCAATGAGGAATCTC+CGG | + | chr8.3:35865506-35865525 | None:intergenic | 40.0% | |
| CAGCAATCATCTTTCAATCC+TGG | + | chr8.3:35862721-35862740 | None:intergenic | 40.0% | |
| CCTGCAAAACAATCAGGATT+GGG | + | chr8.3:35865682-35865701 | None:intergenic | 40.0% | |
| CTCTCCTGCAATGTTCTTAA+GGG | + | chr8.3:35865723-35865742 | None:intergenic | 40.0% | |
| GAGTAACTGAGGACAAAGTA+TGG | + | chr8.3:35862537-35862556 | None:intergenic | 40.0% | |
| GCAATACGAAGAATCCAACA+TGG | - | chr8.3:35861649-35861668 | MS.gene048438:CDS | 40.0% | |
| GTACAAGCAAATTCTTGCGA+AGG | - | chr8.3:35863384-35863403 | MS.gene048438:CDS | 40.0% | |
| GTGGTTTCCCGAAGAAATTT+GGG | - | chr8.3:35864031-35864050 | MS.gene048438:CDS | 40.0% | |
| GTTAGTGTTGTGTTGTGCAT+TGG | - | chr8.3:35861791-35861810 | MS.gene048438:intron | 40.0% | |
| GTTCCATAGAGACTAGGAAA+GGG | + | chr8.3:35865168-35865187 | None:intergenic | 40.0% | |
| TAGGAAAAGTAATGGTGGCT+GGG | - | chr8.3:35862581-35862600 | MS.gene048438:intron | 40.0% | |
| TAGTGATTTCCCCGCATTAA+AGG | - | chr8.3:35862496-35862515 | MS.gene048438:CDS | 40.0% | |
| TATCTTGATTGCATGTGCAG+AGG | - | chr8.3:35864442-35864461 | MS.gene048438:intron | 40.0% | |
| TATGGTTCTTTAGCGACTAG+GGG | - | chr8.3:35865262-35865281 | MS.gene048438:intron | 40.0% | |
| TCACTTGGCTACATTTGACA+AGG | + | chr8.3:35863803-35863822 | None:intergenic | 40.0% | |
| TCTCTCCTGCAATGTTCTTA+AGG | + | chr8.3:35865724-35865743 | None:intergenic | 40.0% | |
| TCTTCCCTTAAGAACATTGC+AGG | - | chr8.3:35865716-35865735 | MS.gene048438:CDS | 40.0% | |
| TGAGGACAAAGTATGGAATC+TGG | + | chr8.3:35862530-35862549 | None:intergenic | 40.0% | |
| TGATAAGCAACAGGTGATGA+AGG | + | chr8.3:35863445-35863464 | None:intergenic | 40.0% | |
| TGCAGACTTTGAATGGATAG+TGG | - | chr8.3:35864012-35864031 | MS.gene048438:CDS | 40.0% | |
| TTAGGAAAAGTAATGGTGGC+TGG | - | chr8.3:35862580-35862599 | MS.gene048438:intron | 40.0% | |
| TTCCATAGAGACTAGGAAAG+GGG | + | chr8.3:35865167-35865186 | None:intergenic | 40.0% | |
| TTCTAGGTTCCATAGAGACT+AGG | + | chr8.3:35865174-35865193 | None:intergenic | 40.0% | |
| TTGATTCTATGCCTTTGTGG+CGG | - | chr8.3:35862176-35862195 | MS.gene048438:intron | 40.0% | |
| ! | CTAGTCACTCTTGTTACTTC+AGG | - | chr8.3:35865441-35865460 | MS.gene048438:intron | 40.0% |
| ! | CTATTGGTGGTAAAAAGCCT+GGG | - | chr8.3:35863599-35863618 | MS.gene048438:intron | 40.0% |
| ! | TCTATTGGTGGTAAAAAGCC+TGG | - | chr8.3:35863598-35863617 | MS.gene048438:intron | 40.0% |
| ! | TTCCACCATGTTTTGCATGA+TGG | + | chr8.3:35864223-35864242 | None:intergenic | 40.0% |
| !! | AAAACAGAGGTTGATGGCAT+AGG | + | chr8.3:35864084-35864103 | None:intergenic | 40.0% |
| !! | AAACAGAGGTTGATGGCATA+GGG | + | chr8.3:35864083-35864102 | None:intergenic | 40.0% |
| !! | ACATTGTTGTTTGTCGTGGA+TGG | + | chr8.3:35863869-35863888 | None:intergenic | 40.0% |
| !! | AGACACATTGTTGTTTGTCG+TGG | + | chr8.3:35863873-35863892 | None:intergenic | 40.0% |
| !! | CTGTCTTACATGGTTTTGCA+AGG | - | chr8.3:35864498-35864517 | MS.gene048438:intron | 40.0% |
| !! | GTCTTACATGGTTTTGCAAG+GGG | - | chr8.3:35864500-35864519 | MS.gene048438:intron | 40.0% |
| !! | TGGAAAGTGCTGACATCAAA+GGG | - | chr8.3:35864238-35864257 | MS.gene048438:intron | 40.0% |
| !!! | ATCTCCAGTGCGGATTTTTT+TGG | - | chr8.3:35865475-35865494 | MS.gene048438:intron | 40.0% |
| !!! | TCTCCTTTTTTGCATGCGTT+GGG | - | chr8.3:35862147-35862166 | MS.gene048438:intron | 40.0% |
| AACACCGAGACTTCGATGAA+CGG | + | chr8.3:35861718-35861737 | None:intergenic | 45.0% | |
| AACCCCTTTCCTAGTCTCTA+TGG | - | chr8.3:35865162-35865181 | MS.gene048438:intron | 45.0% | |
| AAGAACATTGCAGGAGAGAC+TGG | - | chr8.3:35865725-35865744 | MS.gene048438:CDS | 45.0% | |
| AATAACCCAACAGGCAGTTC+CGG | + | chr8.3:35863726-35863745 | None:intergenic | 45.0% | |
| AGAACATTGCAGGAGAGACT+GGG | - | chr8.3:35865726-35865745 | MS.gene048438:CDS | 45.0% | |
| AGGTAGCATATCTGTGTTGG+GGG | - | chr8.3:35862279-35862298 | MS.gene048438:intron | 45.0% | |
| ATCAGGATTGGGAGGAAAAG+GGG | + | chr8.3:35865671-35865690 | None:intergenic | 45.0% | |
| ATGGTTCTTTAGCGACTAGG+GGG | - | chr8.3:35865263-35865282 | MS.gene048438:intron | 45.0% | |
| CAAACAACAATGTGTCTGCC+AGG | - | chr8.3:35863876-35863895 | MS.gene048438:CDS | 45.0% | |
| CAACCCAACGCATGCAAAAA+AGG | + | chr8.3:35862153-35862172 | None:intergenic | 45.0% | |
| CAACGCATGCAAAAAAGGAG+AGG | + | chr8.3:35862148-35862167 | None:intergenic | 45.0% | |
| CAATCAGGATTGGGAGGAAA+AGG | + | chr8.3:35865673-35865692 | None:intergenic | 45.0% | |
| GCAAAACAATCAGGATTGGG+AGG | + | chr8.3:35865679-35865698 | None:intergenic | 45.0% | |
| GCCTGCAAAACAATCAGGAT+TGG | + | chr8.3:35865683-35865702 | None:intergenic | 45.0% | |
| GGTTCCATAGAGACTAGGAA+AGG | + | chr8.3:35865169-35865188 | None:intergenic | 45.0% | |
| GTAAAAAGCCTGGGAAGAGT+GGG | - | chr8.3:35863608-35863627 | MS.gene048438:intron | 45.0% | |
| GTCACCAAAAAAATCCGCAC+TGG | + | chr8.3:35865482-35865501 | None:intergenic | 45.0% | |
| GTTGTGCCTGCAAAACAATC+AGG | + | chr8.3:35865688-35865707 | None:intergenic | 45.0% | |
| TAAAAAGCCTGGGAAGAGTG+GGG | - | chr8.3:35863609-35863628 | MS.gene048438:intron | 45.0% | |
| TAATGTCCAGTCGTCTGAGT+TGG | - | chr8.3:35863931-35863950 | MS.gene048438:CDS | 45.0% | |
| TGATTCTATGCCTTTGTGGC+GGG | - | chr8.3:35862177-35862196 | MS.gene048438:intron | 45.0% | |
| TGATTGCATGTGCAGAGGTT+GGG | - | chr8.3:35864447-35864466 | MS.gene048438:intron | 45.0% | |
| TGCCCGTAAGCTCAATAAGA+AGG | - | chr8.3:35863639-35863658 | MS.gene048438:intron | 45.0% | |
| TGCTCATAGAGAGACTCACT+TGG | + | chr8.3:35863818-35863837 | None:intergenic | 45.0% | |
| TGGATCCGCTACCTTTAATG+CGG | + | chr8.3:35862510-35862529 | None:intergenic | 45.0% | |
| TGGGAAAAAACTCAGCTCCT+TGG | - | chr8.3:35865745-35865764 | MS.gene048438:CDS | 45.0% | |
| TTGATTGCATGTGCAGAGGT+TGG | - | chr8.3:35864446-35864465 | MS.gene048438:intron | 45.0% | |
| TTGTTTGTCGTGGATGGAAC+TGG | + | chr8.3:35863863-35863882 | None:intergenic | 45.0% | |
| TTTCCCCGCATTAAAGGTAG+CGG | - | chr8.3:35862502-35862521 | MS.gene048438:CDS | 45.0% | |
| ! | AGGGCTTACTTGCACTTTTG+AGG | + | chr8.3:35864064-35864083 | None:intergenic | 45.0% |
| ! | CAGCATCTCTTGCTTTGTTC+TGG | + | chr8.3:35864928-35864947 | None:intergenic | 45.0% |
| ! | GGGGCACTCTTACATTATCA+AGG | - | chr8.3:35865282-35865301 | MS.gene048438:intron | 45.0% |
| !! | CAGAGTTCTAATGGACTTCC+TGG | - | chr8.3:35863463-35863482 | MS.gene048438:CDS | 45.0% |
| !! | CCCAATCCTGATTGTTTTGC+AGG | - | chr8.3:35865679-35865698 | MS.gene048438:CDS | 45.0% |
| !! | GATTGTTTTGCAGGCACAAC+AGG | - | chr8.3:35865688-35865707 | MS.gene048438:CDS | 45.0% |
| !! | GTGGAAAGTGCTGACATCAA+AGG | - | chr8.3:35864237-35864256 | MS.gene048438:intron | 45.0% |
| !!! | CTCTCCTTTTTTGCATGCGT+TGG | - | chr8.3:35862146-35862165 | MS.gene048438:intron | 45.0% |
| !!! | GCGGATTTTTTTGGTGACTC+CGG | - | chr8.3:35865484-35865503 | MS.gene048438:intron | 45.0% |
| AAAAAGCCTGGGAAGAGTGG+GGG | - | chr8.3:35863610-35863629 | MS.gene048438:intron | 50.0% | |
| AAGCAACATGGTTGGACCGA+TGG | - | chr8.3:35863319-35863338 | MS.gene048438:intron | 50.0% | |
| ACATGGGCGTCAGTAACGTA+TGG | - | chr8.3:35861666-35861685 | MS.gene048438:CDS | 50.0% | |
| ACGAGAAGTCATAGATGGCC+TGG | + | chr8.3:35863897-35863916 | None:intergenic | 50.0% | |
| AGTGCAACTTCTACTGCACG+TGG | - | chr8.3:35864108-35864127 | MS.gene048438:CDS | 50.0% | |
| CATGGGCGTCAGTAACGTAT+GGG | - | chr8.3:35861667-35861686 | MS.gene048438:CDS | 50.0% | |
| CGCTAGCAGCAAGATCAATG+AGG | + | chr8.3:35865515-35865534 | None:intergenic | 50.0% | |
| CGGCAGAACAATCAATGCAG+AGG | + | chr8.3:35861698-35861717 | None:intergenic | 50.0% | |
| GATCCGCTACCTTTAATGCG+GGG | + | chr8.3:35862508-35862527 | None:intergenic | 50.0% | |
| GATTCTATGCCTTTGTGGCG+GGG | - | chr8.3:35862178-35862197 | MS.gene048438:intron | 50.0% | |
| GGATCCGCTACCTTTAATGC+GGG | + | chr8.3:35862509-35862528 | None:intergenic | 50.0% | |
| GGTAAAAAGCCTGGGAAGAG+TGG | - | chr8.3:35863607-35863626 | MS.gene048438:intron | 50.0% | |
| GGTAGCATATCTGTGTTGGG+GGG | - | chr8.3:35862280-35862299 | MS.gene048438:intron | 50.0% | |
| GTAGCATATCTGTGTTGGGG+GGG | - | chr8.3:35862281-35862300 | MS.gene048438:intron | 50.0% | |
| GTATACCGGAACTGCCTGTT+GGG | - | chr8.3:35863718-35863737 | MS.gene048438:intron | 50.0% | |
| TACGTTACTGACGCCCATGT+TGG | + | chr8.3:35861666-35861685 | None:intergenic | 50.0% | |
| TCTGCCGTTCATCGAAGTCT+CGG | - | chr8.3:35861711-35861730 | MS.gene048438:intron | 50.0% | |
| TGTATACCGGAACTGCCTGT+TGG | - | chr8.3:35863717-35863736 | MS.gene048438:intron | 50.0% | |
| ! | CAGTCGTCTGAGTTGGATTC+CGG | - | chr8.3:35863938-35863957 | MS.gene048438:CDS | 50.0% |
| ACTGGAGCAGGTGGTTCTTC+AGG | + | chr8.3:35863845-35863864 | None:intergenic | 55.0% | |
| CAACATGGTTGGACCGATGG+TGG | - | chr8.3:35863322-35863341 | MS.gene048438:intron | 55.0% | |
| CATATCTGTGTTGGGGGGGA+TGG | - | chr8.3:35862285-35862304 | MS.gene048438:intron | 55.0% | |
| CGGAATCCAACTCAGACGAC+TGG | + | chr8.3:35863940-35863959 | None:intergenic | 55.0% | |
| CTTGTACAACTCTGCAGCCC+TGG | + | chr8.3:35863371-35863390 | None:intergenic | 55.0% | |
| GTCGATGGAATTGGACTCGG+AGG | - | chr8.3:35861902-35861921 | MS.gene048438:CDS | 55.0% | |
| TTCGTCTGCCATCTCCAGTG+CGG | - | chr8.3:35865465-35865484 | MS.gene048438:intron | 55.0% | |
| ! | TCGTCTGAGTTGGATTCCGG+AGG | - | chr8.3:35863941-35863960 | MS.gene048438:CDS | 55.0% |
| !! | CTAATGGACTTCCTGGCGTC+AGG | - | chr8.3:35863470-35863489 | MS.gene048438:CDS | 55.0% |
| ACCTCATTGGTCCTGACGCC+AGG | + | chr8.3:35863484-35863503 | None:intergenic | 60.0% | |
| GTCGTGGATGGAACTGGAGC+AGG | + | chr8.3:35863857-35863876 | None:intergenic | 60.0% | |
| GTGGATGGAACTGGAGCAGG+TGG | + | chr8.3:35863854-35863873 | None:intergenic | 60.0% | |
| TCCTGGCGTCAGGACCAATG+AGG | - | chr8.3:35863480-35863499 | MS.gene048438:CDS | 60.0% | |
| CCAAGTCCCCCACTCTTCCC+AGG | + | chr8.3:35863619-35863638 | None:intergenic | 65.0% | |
| CCTGGGAAGAGTGGGGGACT+TGG | - | chr8.3:35863616-35863635 | MS.gene048438:intron | 65.0% | |
| CGGTGACTTCCCCGCCACAA+AGG | + | chr8.3:35862190-35862209 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 35861636 | 35865779 | 35861636 | ID=MS.gene048438 |
| chr8.3 | mRNA | 35861636 | 35865779 | 35861636 | ID=MS.gene048438.t1;Parent=MS.gene048438 |
| chr8.3 | exon | 35865661 | 35865779 | 35865661 | ID=MS.gene048438.t1.exon1;Parent=MS.gene048438.t1 |
| chr8.3 | CDS | 35865661 | 35865779 | 35865661 | ID=cds.MS.gene048438.t1;Parent=MS.gene048438.t1 |
| chr8.3 | exon | 35863755 | 35864178 | 35863755 | ID=MS.gene048438.t1.exon2;Parent=MS.gene048438.t1 |
| chr8.3 | CDS | 35863755 | 35864178 | 35863755 | ID=cds.MS.gene048438.t1;Parent=MS.gene048438.t1 |
| chr8.3 | exon | 35863382 | 35863600 | 35863382 | ID=MS.gene048438.t1.exon3;Parent=MS.gene048438.t1 |
| chr8.3 | CDS | 35863382 | 35863600 | 35863382 | ID=cds.MS.gene048438.t1;Parent=MS.gene048438.t1 |
| chr8.3 | exon | 35862439 | 35862564 | 35862439 | ID=MS.gene048438.t1.exon4;Parent=MS.gene048438.t1 |
| chr8.3 | CDS | 35862439 | 35862564 | 35862439 | ID=cds.MS.gene048438.t1;Parent=MS.gene048438.t1 |
| chr8.3 | exon | 35861855 | 35861952 | 35861855 | ID=MS.gene048438.t1.exon5;Parent=MS.gene048438.t1 |
| chr8.3 | CDS | 35861855 | 35861952 | 35861855 | ID=cds.MS.gene048438.t1;Parent=MS.gene048438.t1 |
| chr8.3 | exon | 35861636 | 35861714 | 35861636 | ID=MS.gene048438.t1.exon6;Parent=MS.gene048438.t1 |
| chr8.3 | CDS | 35861636 | 35861714 | 35861636 | ID=cds.MS.gene048438.t1;Parent=MS.gene048438.t1 |
| Gene Sequence |
| Protein sequence |
