Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71181.t1 | XP_013446059.1 | 96.5 | 401 | 14 | 0 | 1 | 401 | 1 | 401 | 3.00E-185 | 657.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71181.t1 | Q8H100 | 68.9 | 412 | 113 | 6 | 2 | 401 | 5 | 413 | 1.6e-123 | 444.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71181.t1 | G7LHQ6 | 96.5 | 401 | 14 | 0 | 1 | 401 | 1 | 401 | 2.2e-185 | 657.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene71181 | MS.gene048437 | PPI |
| MS.gene71181 | MS.gene038430 | PPI |
| MS.gene71181 | MS.gene015841 | PPI |
| MS.gene71181 | MS.gene05967 | PPI |
| MS.gene71181 | MS.gene65987 | PPI |
| MS.gene71181 | MS.gene008993 | PPI |
| MS.gene71181 | MS.gene66388 | PPI |
| MS.gene71181 | MS.gene049051 | PPI |
| MS.gene71181 | MS.gene049052 | PPI |
| MS.gene71181 | MS.gene048438 | PPI |
| MS.gene71181 | MS.gene008994 | PPI |
| MS.gene71181 | MS.gene20137 | PPI |
| MS.gene71181 | MS.gene030337 | PPI |
| MS.gene71181 | MS.gene063343 | PPI |
| MS.gene71181 | MS.gene65986 | PPI |
| MS.gene71181 | MS.gene75024 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71181.t1 | MTR_8g067090 | 96.010 | 401 | 16 | 0 | 1 | 401 | 1 | 401 | 0.0 | 783 |
| MS.gene71181.t1 | MTR_8g471120 | 96.010 | 401 | 16 | 0 | 1 | 401 | 1 | 401 | 0.0 | 783 |
| MS.gene71181.t1 | MTR_8g067080 | 77.913 | 412 | 77 | 7 | 1 | 401 | 1 | 409 | 0.0 | 609 |
| MS.gene71181.t1 | MTR_8g471110 | 77.913 | 412 | 77 | 7 | 1 | 401 | 1 | 409 | 0.0 | 609 |
| MS.gene71181.t1 | MTR_8g067080 | 77.670 | 412 | 76 | 8 | 1 | 401 | 1 | 407 | 0.0 | 602 |
| MS.gene71181.t1 | MTR_7g099830 | 41.791 | 134 | 73 | 1 | 13 | 146 | 7 | 135 | 9.30e-31 | 122 |
| MS.gene71181.t1 | MTR_1g069000 | 40.000 | 135 | 74 | 2 | 13 | 145 | 7 | 136 | 1.17e-27 | 114 |
| MS.gene71181.t1 | MTR_8g464390 | 37.500 | 176 | 81 | 6 | 16 | 164 | 23 | 196 | 8.78e-24 | 103 |
| MS.gene71181.t1 | MTR_6g080710 | 43.077 | 130 | 64 | 3 | 16 | 136 | 23 | 151 | 3.34e-23 | 98.6 |
| MS.gene71181.t1 | MTR_2g080950 | 35.185 | 162 | 87 | 5 | 16 | 169 | 23 | 174 | 1.85e-22 | 99.4 |
| MS.gene71181.t1 | MTR_3g017500 | 55.556 | 63 | 27 | 1 | 22 | 83 | 33 | 95 | 1.06e-17 | 84.3 |
| MS.gene71181.t1 | MTR_3g017500 | 55.556 | 63 | 27 | 1 | 22 | 83 | 63 | 125 | 2.12e-17 | 83.6 |
| MS.gene71181.t1 | MTR_2g030230 | 38.614 | 101 | 57 | 3 | 13 | 109 | 21 | 120 | 7.28e-17 | 81.3 |
| MS.gene71181.t1 | MTR_8g088320 | 38.614 | 101 | 57 | 4 | 13 | 109 | 12 | 111 | 3.15e-16 | 79.3 |
| MS.gene71181.t1 | MTR_8g038400 | 50.794 | 63 | 30 | 1 | 22 | 83 | 29 | 91 | 7.68e-16 | 79.0 |
| MS.gene71181.t1 | MTR_4g074170 | 35.433 | 127 | 72 | 4 | 22 | 138 | 491 | 617 | 1.83e-14 | 75.9 |
| MS.gene71181.t1 | MTR_7g020860 | 47.761 | 67 | 33 | 1 | 22 | 86 | 514 | 580 | 1.87e-13 | 72.8 |
| MS.gene71181.t1 | MTR_7g020860 | 47.761 | 67 | 33 | 1 | 22 | 86 | 514 | 580 | 1.88e-13 | 72.4 |
| MS.gene71181.t1 | MTR_8g100100 | 46.753 | 77 | 36 | 2 | 12 | 86 | 499 | 572 | 8.10e-13 | 70.5 |
| MS.gene71181.t1 | MTR_8g100100 | 46.753 | 77 | 36 | 2 | 12 | 86 | 505 | 578 | 8.13e-13 | 70.5 |
| MS.gene71181.t1 | MTR_3g098680 | 45.946 | 74 | 35 | 2 | 12 | 83 | 502 | 572 | 7.99e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71181.t1 | AT4G17890 | 67.718 | 412 | 118 | 6 | 2 | 401 | 5 | 413 | 0.0 | 531 |
| MS.gene71181.t1 | AT5G46750 | 63.659 | 410 | 132 | 7 | 1 | 401 | 1 | 402 | 1.83e-177 | 500 |
| MS.gene71181.t1 | AT4G17890 | 67.282 | 379 | 109 | 6 | 2 | 368 | 5 | 380 | 8.72e-171 | 483 |
| MS.gene71181.t1 | AT2G35210 | 63.158 | 399 | 134 | 8 | 1 | 392 | 1 | 393 | 4.80e-159 | 453 |
| MS.gene71181.t1 | AT2G35210 | 60.465 | 344 | 124 | 7 | 1 | 338 | 1 | 338 | 6.44e-129 | 376 |
| MS.gene71181.t1 | AT3G53710 | 45.113 | 133 | 68 | 1 | 13 | 145 | 7 | 134 | 1.06e-32 | 128 |
| MS.gene71181.t1 | AT3G53710 | 45.113 | 133 | 68 | 1 | 13 | 145 | 7 | 134 | 1.06e-32 | 128 |
| MS.gene71181.t1 | AT3G53710 | 45.113 | 133 | 68 | 1 | 13 | 145 | 7 | 134 | 1.06e-32 | 128 |
| MS.gene71181.t1 | AT2G37550 | 44.275 | 131 | 68 | 1 | 13 | 143 | 7 | 132 | 2.06e-32 | 127 |
| MS.gene71181.t1 | AT2G37550 | 44.275 | 131 | 68 | 1 | 13 | 143 | 7 | 132 | 2.06e-32 | 127 |
| MS.gene71181.t1 | AT5G54310 | 50.000 | 80 | 40 | 0 | 12 | 91 | 18 | 97 | 7.47e-23 | 100 |
| MS.gene71181.t1 | AT3G17660 | 46.250 | 80 | 43 | 0 | 12 | 91 | 18 | 97 | 1.69e-21 | 91.7 |
| MS.gene71181.t1 | AT3G17660 | 46.250 | 80 | 43 | 0 | 12 | 91 | 18 | 97 | 3.97e-21 | 91.7 |
| MS.gene71181.t1 | AT3G17660 | 46.250 | 80 | 43 | 0 | 12 | 91 | 18 | 97 | 1.66e-20 | 90.5 |
| MS.gene71181.t1 | AT3G07940 | 50.000 | 72 | 35 | 1 | 13 | 83 | 50 | 121 | 5.67e-18 | 83.6 |
| MS.gene71181.t1 | AT3G07940 | 50.000 | 72 | 35 | 1 | 13 | 83 | 50 | 121 | 1.31e-17 | 84.3 |
| MS.gene71181.t1 | AT4G21160 | 42.500 | 80 | 45 | 1 | 13 | 91 | 18 | 97 | 3.31e-17 | 82.4 |
| MS.gene71181.t1 | AT4G21160 | 42.500 | 80 | 45 | 1 | 13 | 91 | 18 | 97 | 3.31e-17 | 82.4 |
| MS.gene71181.t1 | AT4G21160 | 42.500 | 80 | 45 | 1 | 13 | 91 | 18 | 97 | 3.31e-17 | 82.4 |
| MS.gene71181.t1 | AT4G21160 | 42.500 | 80 | 45 | 1 | 13 | 91 | 18 | 97 | 3.31e-17 | 82.4 |
| MS.gene71181.t1 | AT4G05330 | 41.250 | 80 | 46 | 1 | 13 | 91 | 18 | 97 | 2.67e-16 | 79.7 |
| MS.gene71181.t1 | AT4G05330 | 41.250 | 80 | 46 | 1 | 13 | 91 | 18 | 97 | 2.67e-16 | 79.7 |
| MS.gene71181.t1 | AT4G16220 | 57.353 | 68 | 23 | 2 | 64 | 128 | 121 | 185 | 3.04e-14 | 72.4 |
| MS.gene71181.t1 | AT1G60860 | 50.000 | 64 | 30 | 1 | 22 | 83 | 479 | 542 | 3.27e-14 | 75.1 |
| MS.gene71181.t1 | AT1G60860 | 50.000 | 64 | 30 | 1 | 22 | 83 | 368 | 431 | 3.29e-14 | 74.7 |
| MS.gene71181.t1 | AT1G60860 | 50.000 | 64 | 30 | 1 | 22 | 83 | 308 | 371 | 4.50e-14 | 74.3 |
| MS.gene71181.t1 | AT1G10870 | 51.562 | 64 | 29 | 1 | 22 | 83 | 479 | 542 | 7.38e-14 | 73.9 |
| MS.gene71181.t1 | AT5G13300 | 43.836 | 73 | 39 | 1 | 22 | 92 | 513 | 585 | 7.40e-14 | 73.9 |
| MS.gene71181.t1 | AT1G10870 | 51.562 | 64 | 29 | 1 | 22 | 83 | 479 | 542 | 8.31e-14 | 73.6 |
| MS.gene71181.t1 | AT5G61980 | 48.438 | 64 | 31 | 1 | 22 | 83 | 510 | 573 | 8.85e-14 | 73.6 |
| MS.gene71181.t1 | AT3G17660 | 53.061 | 49 | 23 | 0 | 12 | 60 | 18 | 66 | 1.01e-12 | 67.4 |
| MS.gene71181.t1 | AT4G32630 | 33.333 | 93 | 56 | 3 | 1 | 92 | 1 | 88 | 9.72e-11 | 63.9 |
| MS.gene71181.t1 | AT4G32630 | 33.333 | 93 | 56 | 3 | 1 | 92 | 1 | 88 | 9.72e-11 | 63.9 |
| MS.gene71181.t1 | AT4G32630 | 33.333 | 93 | 56 | 3 | 1 | 92 | 1 | 88 | 9.72e-11 | 63.9 |
| MS.gene71181.t1 | AT4G32630 | 33.333 | 93 | 56 | 3 | 1 | 92 | 1 | 88 | 9.72e-11 | 63.9 |
| MS.gene71181.t1 | AT4G32630 | 33.333 | 93 | 56 | 3 | 1 | 92 | 1 | 88 | 9.72e-11 | 63.9 |
| MS.gene71181.t1 | AT4G32630 | 33.333 | 93 | 56 | 3 | 1 | 92 | 1 | 88 | 9.99e-11 | 63.9 |
Find 71 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTGGTTTCCCGAAGAAATT+TGG | 0.187342 | 8.3:+35880211 | MS.gene71181:CDS |
| CAGCATCTCTTGCTTTGTTC+TGG | 0.224885 | 8.3:-35881107 | None:intergenic |
| ACTGGAGCAGGTGGTTCTTC+AGG | 0.274169 | 8.3:-35880022 | None:intergenic |
| CAAGTTGAAGTCTGAAAATA+AGG | 0.314511 | 8.3:+35877633 | MS.gene71181:CDS |
| CTCCTTGATGACAGATCTTC+AGG | 0.319205 | 8.3:+35881955 | MS.gene71181:CDS |
| GTTGCTTATCAGAGTTCTAA+TGG | 0.323772 | 8.3:+35879634 | MS.gene71181:CDS |
| CAGAGTTCTAATGGACTTCC+TGG | 0.349310 | 8.3:+35879643 | MS.gene71181:CDS |
| TCTCTCCTGCAATGTTCTTA+AGG | 0.357125 | 8.3:-35881904 | None:intergenic |
| TCAAACTTCTTTGCAGACTT+TGG | 0.358116 | 8.3:+35880181 | MS.gene71181:CDS |
| CAGTCGTCTGAGTTGGATTC+CGG | 0.360915 | 8.3:+35880118 | MS.gene71181:CDS |
| TCTGAAGACGAGGTTCTTAT+CGG | 0.372274 | 8.3:-35877605 | None:intergenic |
| TCTTCCCTTAAGAACATTGC+AGG | 0.374215 | 8.3:+35881899 | MS.gene71181:CDS |
| AAGAACATTGCAGGAGAGAC+TGG | 0.375056 | 8.3:+35881908 | MS.gene71181:CDS |
| AATAATTTAAAGAAGTCTAT+TGG | 0.381488 | 8.3:+35879763 | MS.gene71181:CDS |
| TTACCTTCTTATTGAGCTTA+CGG | 0.385740 | 8.3:-35879822 | None:intergenic |
| CTTGTACAACTCTGCAGCCC+TGG | 0.387896 | 8.3:-35879548 | None:intergenic |
| CTCTCCTGCAATGTTCTTAA+GGG | 0.388884 | 8.3:-35881903 | None:intergenic |
| GTATTTGACCCAAATTTCTT+CGG | 0.390787 | 8.3:-35880220 | None:intergenic |
| TATTTGACCCAAATTTCTTC+GGG | 0.392303 | 8.3:-35880219 | None:intergenic |
| TACCTTCTTATTGAGCTTAC+GGG | 0.406262 | 8.3:-35879821 | None:intergenic |
| GCAGACTTTGGAATGGATAG+TGG | 0.415776 | 8.3:+35880193 | MS.gene71181:CDS |
| GTGGTTTCCCGAAGAAATTT+GGG | 0.427027 | 8.3:+35880212 | MS.gene71181:CDS |
| TTGTTTGTCGTGGATGGAAC+TGG | 0.430685 | 8.3:-35880040 | None:intergenic |
| ACCTCATTGGTCCTGACGCC+AGG | 0.442116 | 8.3:-35879661 | None:intergenic |
| CTAATGGACTTCCTGGCGTC+AGG | 0.450431 | 8.3:+35879650 | MS.gene71181:CDS |
| ATTGAATGTATTTGAACCTC+CGG | 0.459068 | 8.3:-35880137 | None:intergenic |
| GAAGGAAGTAGCTAAAAGTA+TGG | 0.460701 | 8.3:+35879582 | MS.gene71181:CDS |
| TCAAAACGAGAAGTCATAGA+TGG | 0.464553 | 8.3:-35880079 | None:intergenic |
| TTAGAACTCTGATAAGCAAC+AGG | 0.481375 | 8.3:-35879631 | None:intergenic |
| CTTCTTTGCAGACTTTGGAA+TGG | 0.490698 | 8.3:+35880186 | MS.gene71181:CDS |
| TAGAAGCAAAGTATACATCC+AGG | 0.500546 | 8.3:+35879530 | MS.gene71181:CDS |
| ACGAGAAGTCATAGATGGCC+TGG | 0.509294 | 8.3:-35880074 | None:intergenic |
| ATCGCTAGCAGCAAGATCAA+TGG | 0.517560 | 8.3:-35881697 | None:intergenic |
| ACATGGGCGTCAGTAACGTA+TGG | 0.518284 | 8.3:+35877845 | MS.gene71181:CDS |
| AAAAGTATGGCTGAAGAGAA+AGG | 0.520493 | 8.3:+35879595 | MS.gene71181:CDS |
| TGATAAGCAACAGGTGATGA+AGG | 0.530089 | 8.3:-35879622 | None:intergenic |
| GATCTACAAACTTAGACTCA+TGG | 0.530785 | 8.3:+35879416 | MS.gene71181:intron |
| AAGCAACATGGTTGGACCGA+TGG | 0.531171 | 8.3:+35879499 | MS.gene71181:CDS |
| AAGATCAATGGAGGAATCTC+CGG | 0.531888 | 8.3:-35881685 | None:intergenic |
| ACATTGTTGTTTGTCGTGGA+TGG | 0.534249 | 8.3:-35880046 | None:intergenic |
| CGGAATCCAACTCAGACGAC+TGG | 0.539405 | 8.3:-35880117 | None:intergenic |
| TGTCATCAAGGAGGAGGCCA+AGG | 0.539734 | 8.3:-35881945 | None:intergenic |
| CAAACAACAATGTGTCTGCC+AGG | 0.547869 | 8.3:+35880056 | MS.gene71181:CDS |
| TCTGCCGTTCATCGAAGTCT+CGG | 0.549396 | 8.3:+35877890 | MS.gene71181:CDS |
| GTCGTGGATGGAACTGGAGC+AGG | 0.550054 | 8.3:-35880034 | None:intergenic |
| GCAAAGAAGTTTGATGACTT+CGG | 0.551658 | 8.3:-35880172 | None:intergenic |
| TACGTTACTGACGCCCATGT+TGG | 0.552830 | 8.3:-35877842 | None:intergenic |
| TAATGTCCAGTCGTCTGAGT+TGG | 0.557059 | 8.3:+35880111 | MS.gene71181:CDS |
| GTACAAGCAAATTCTTGCGA+AGG | 0.584924 | 8.3:+35879564 | MS.gene71181:CDS |
| AAGATCTGTCATCAAGGAGG+AGG | 0.586831 | 8.3:-35881951 | None:intergenic |
| AGACACATTGTTGTTTGTCG+TGG | 0.586871 | 8.3:-35880050 | None:intergenic |
| TGCCCGTAAGCTCAATAAGA+AGG | 0.587772 | 8.3:+35879819 | MS.gene71181:CDS |
| AATTTAAAGAAGTCTATTGG+TGG | 0.593349 | 8.3:+35879766 | MS.gene71181:CDS |
| AGAACATTGCAGGAGAGACT+GGG | 0.594396 | 8.3:+35881909 | MS.gene71181:CDS |
| GAAAGAAAACACATTAGAGA+AGG | 0.594618 | 8.3:+35879687 | MS.gene71181:CDS |
| CAACATGGTTGGACCGATGG+TGG | 0.600620 | 8.3:+35879502 | MS.gene71181:CDS |
| CATGGGCGTCAGTAACGTAT+GGG | 0.603242 | 8.3:+35877846 | MS.gene71181:CDS |
| TCGTCTGAGTTGGATTCCGG+AGG | 0.612556 | 8.3:+35880121 | MS.gene71181:CDS |
| GTCCTGAAGATCTGTCATCA+AGG | 0.612922 | 8.3:-35881957 | None:intergenic |
| ACTATTGTATGTGAAGCTCT+AGG | 0.615770 | 8.3:-35879736 | None:intergenic |
| AGAAGCAAAGTATACATCCA+GGG | 0.624009 | 8.3:+35879531 | MS.gene71181:CDS |
| TGCTCATAGAGAGACTCACT+TGG | 0.640748 | 8.3:-35879995 | None:intergenic |
| AACACCGAGACTTCGATGAA+CGG | 0.641366 | 8.3:-35877894 | None:intergenic |
| CGGCAGAACAATCAATGCAG+AGG | 0.642639 | 8.3:-35877874 | None:intergenic |
| GCAATACGAAGAATCCAACA+TGG | 0.667289 | 8.3:+35877828 | MS.gene71181:CDS |
| GCTAGCAGCAAGATCAATGG+AGG | 0.673995 | 8.3:-35881694 | None:intergenic |
| GTGGATGGAACTGGAGCAGG+TGG | 0.679612 | 8.3:-35880031 | None:intergenic |
| TTCGTCTGCCATCTCCAGTG+CGG | 0.684569 | 8.3:+35881647 | MS.gene71181:CDS |
| CAATACGAAGAATCCAACAT+GGG | 0.708002 | 8.3:+35877829 | MS.gene71181:CDS |
| CTGAAGATCTGTCATCAAGG+AGG | 0.712381 | 8.3:-35881954 | None:intergenic |
| TCCTGGCGTCAGGACCAATG+AGG | 0.713723 | 8.3:+35879660 | MS.gene71181:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATAAAATATGTAATGA+TGG | + | chr8.3:35878164-35878183 | MS.gene71181:intron | 10.0% |
| !! | ATCAATATTATATTAGAATT+AGG | + | chr8.3:35878935-35878954 | MS.gene71181:intron | 10.0% |
| !! | TATTATTTGATATGAAAATT+AGG | + | chr8.3:35881526-35881545 | MS.gene71181:intron | 10.0% |
| !! | AATAAAAATAAATAAGTGCA+TGG | - | chr8.3:35880995-35881014 | None:intergenic | 15.0% |
| !! | AATAATTTAAAGAAGTCTAT+TGG | + | chr8.3:35879763-35879782 | MS.gene71181:CDS | 15.0% |
| !! | ATAATAACAATATTAAGGTA+TGG | + | chr8.3:35880655-35880674 | MS.gene71181:intron | 15.0% |
| !! | TAAAAAATATACTAAACTCA+CGG | - | chr8.3:35878389-35878408 | None:intergenic | 15.0% |
| !! | TAATGTCACATTAAAATTTA+GGG | - | chr8.3:35880524-35880543 | None:intergenic | 15.0% |
| !! | TGTCTAATTTATCATTTAAA+TGG | + | chr8.3:35878788-35878807 | MS.gene71181:intron | 15.0% |
| !! | TTAATGTCACATTAAAATTT+AGG | - | chr8.3:35880525-35880544 | None:intergenic | 15.0% |
| !!! | ATAATTTTCCTTAAGAAATT+TGG | - | chr8.3:35881509-35881528 | None:intergenic | 15.0% |
| !!! | GTATTTTTTTTTTTGTATAC+CGG | + | chr8.3:35879884-35879903 | MS.gene71181:intron | 15.0% |
| !!! | TTTCCTTAATTAATTTTACT+AGG | + | chr8.3:35879195-35879214 | MS.gene71181:intron | 15.0% |
| !!! | TTTCTTTTGATTTTTTATCT+TGG | + | chr8.3:35877677-35877696 | MS.gene71181:intron | 15.0% |
| !!! | TTTTTCTTTCAAAAATTTGT+CGG | + | chr8.3:35880497-35880516 | MS.gene71181:intron | 15.0% |
| !! | AATTTCTTAGAGATGAATTT+AGG | - | chr8.3:35881294-35881313 | None:intergenic | 20.0% |
| !! | ACTAATATAATTGGCATTTA+TGG | + | chr8.3:35881426-35881445 | MS.gene71181:intron | 20.0% |
| !! | ATCAATATTATATTAGAACC+AGG | + | chr8.3:35878879-35878898 | MS.gene71181:intron | 20.0% |
| !! | ATTTCTTAGAGATGAATTTA+GGG | - | chr8.3:35881293-35881312 | None:intergenic | 20.0% |
| !! | CGAAAAATGACTAATATAAT+TGG | + | chr8.3:35881417-35881436 | MS.gene71181:intron | 20.0% |
| !! | GATCCAAAAAAAAAAAGATA+TGG | + | chr8.3:35880839-35880858 | MS.gene71181:intron | 20.0% |
| !! | GTGCTATAATAACAATATTA+AGG | + | chr8.3:35880650-35880669 | MS.gene71181:intron | 20.0% |
| !! | TATAAAATATGTAATGATGG+TGG | + | chr8.3:35878167-35878186 | MS.gene71181:intron | 20.0% |
| !! | TCAAAGGGTTATATAATAAA+AGG | + | chr8.3:35880434-35880453 | MS.gene71181:intron | 20.0% |
| !! | TGAAATCATTGAAAAATTCT+AGG | + | chr8.3:35880741-35880760 | MS.gene71181:intron | 20.0% |
| !! | TGATTAATGAAAAACACAAA+AGG | - | chr8.3:35878863-35878882 | None:intergenic | 20.0% |
| !! | TGTATAAATATCAAACTGAA+CGG | - | chr8.3:35878501-35878520 | None:intergenic | 20.0% |
| !! | TTAATCTAGAAAGATTTGAT+TGG | + | chr8.3:35879234-35879253 | MS.gene71181:intron | 20.0% |
| !!! | ACTCCATATCTTTTTTTTTT+TGG | - | chr8.3:35880845-35880864 | None:intergenic | 20.0% |
| !!! | ATCTCTAAGAAATTTTTTCA+TGG | + | chr8.3:35881300-35881319 | MS.gene71181:intron | 20.0% |
| !!! | ATCTTTTTTTTTTTGGATCA+TGG | - | chr8.3:35880838-35880857 | None:intergenic | 20.0% |
| !!! | ATGTAGTTTTTGTTTGAAAA+GGG | + | chr8.3:35878117-35878136 | MS.gene71181:intron | 20.0% |
| !!! | ATTTTATGAGAAAGATGAAA+GGG | + | chr8.3:35878412-35878431 | MS.gene71181:intron | 20.0% |
| !!! | ATTTTCTGATTTATGTTATC+GGG | + | chr8.3:35877740-35877759 | MS.gene71181:intron | 20.0% |
| !!! | CAACTAAAAATAATGAGTTT+TGG | + | chr8.3:35879448-35879467 | MS.gene71181:CDS | 20.0% |
| !!! | CATTTTCTGATTTATGTTAT+CGG | + | chr8.3:35877739-35877758 | MS.gene71181:intron | 20.0% |
| !!! | GAATAATGGTAATGAAATTA+GGG | - | chr8.3:35881792-35881811 | None:intergenic | 20.0% |
| !!! | TAAAACATATCTTCTAGTTT+TGG | - | chr8.3:35880592-35880611 | None:intergenic | 20.0% |
| !!! | TAGAAGATATGTTTTAACAA+AGG | + | chr8.3:35880596-35880615 | MS.gene71181:intron | 20.0% |
| !!! | TAGTGCATTAATTTGTATTA+TGG | + | chr8.3:35878204-35878223 | MS.gene71181:intron | 20.0% |
| !!! | TATGTAGTTTTTGTTTGAAA+AGG | + | chr8.3:35878116-35878135 | MS.gene71181:intron | 20.0% |
| !!! | TATTTTATGAGAAAGATGAA+AGG | + | chr8.3:35878411-35878430 | MS.gene71181:intron | 20.0% |
| !!! | TCTAGTTTTGGTAATTAAAT+TGG | - | chr8.3:35880580-35880599 | None:intergenic | 20.0% |
| !!! | TGAATAATGGTAATGAAATT+AGG | - | chr8.3:35881793-35881812 | None:intergenic | 20.0% |
| ! | AATTAGGATTGAAAGATGAT+TGG | + | chr8.3:35878951-35878970 | MS.gene71181:intron | 25.0% |
| ! | AATTTAAAGAAGTCTATTGG+TGG | + | chr8.3:35879766-35879785 | MS.gene71181:CDS | 25.0% |
| ! | ACCATAAAATTAATTCAGGA+AGG | - | chr8.3:35880553-35880572 | None:intergenic | 25.0% |
| ! | ATTTGACACCAAATTTCTTA+AGG | + | chr8.3:35881498-35881517 | MS.gene71181:intron | 25.0% |
| ! | CAAAATTTCACTCAATTAAG+AGG | + | chr8.3:35879108-35879127 | MS.gene71181:intron | 25.0% |
| ! | CAAGAACAAAAACTGAATAA+TGG | - | chr8.3:35881806-35881825 | None:intergenic | 25.0% |
| ! | CACAACCATAAAATTAATTC+AGG | - | chr8.3:35880557-35880576 | None:intergenic | 25.0% |
| ! | CAGCCTAGTAAAATTAATTA+AGG | - | chr8.3:35879201-35879220 | None:intergenic | 25.0% |
| ! | GCAGTAAAATACTATAAGAA+AGG | - | chr8.3:35881170-35881189 | None:intergenic | 25.0% |
| ! | GTTTCTATATCAATAACGAA+AGG | - | chr8.3:35881752-35881771 | None:intergenic | 25.0% |
| ! | TTAATTGAGAAAAGAAACTG+AGG | - | chr8.3:35879260-35879279 | None:intergenic | 25.0% |
| ! | TTAGAAGTTCTTATACAACA+TGG | - | chr8.3:35879012-35879031 | None:intergenic | 25.0% |
| ! | TTATTGATATAGAAACGTCA+TGG | + | chr8.3:35881756-35881775 | MS.gene71181:intron | 25.0% |
| ! | TTCGAGATTATTGTATTTAG+TGG | - | chr8.3:35881401-35881420 | None:intergenic | 25.0% |
| ! | TTGTAGATCTACATAACAAA+AGG | - | chr8.3:35879405-35879424 | None:intergenic | 25.0% |
| ! | TTTCTTAGAGATGAATTTAG+GGG | - | chr8.3:35881292-35881311 | None:intergenic | 25.0% |
| !! | ACCTTCCTGAATTAATTTTA+TGG | + | chr8.3:35880549-35880568 | MS.gene71181:intron | 25.0% |
| !! | ATCTTGTTATAACTTTGAAC+TGG | - | chr8.3:35880375-35880394 | None:intergenic | 25.0% |
| !! | ATTTCGTCATCTCAATTTTT+CGG | + | chr8.3:35881081-35881100 | MS.gene71181:CDS | 25.0% |
| !! | CAAATTTTCTTTAAGCAACA+TGG | + | chr8.3:35879487-35879506 | MS.gene71181:CDS | 25.0% |
| !! | CTTAATTAATTTTACTAGGC+TGG | + | chr8.3:35879199-35879218 | MS.gene71181:intron | 25.0% |
| !! | GGTAAAATGATTTTGTGATT+AGG | + | chr8.3:35878138-35878157 | MS.gene71181:intron | 25.0% |
| !! | TACAAAGAAAATTAGCTCTT+TGG | - | chr8.3:35881554-35881573 | None:intergenic | 25.0% |
| !! | TTTTGTCATGTATAAGATTG+AGG | + | chr8.3:35881017-35881036 | MS.gene71181:intron | 25.0% |
| !!! | CTAAAAATAATGAGTTTTGG+AGG | + | chr8.3:35879451-35879470 | MS.gene71181:CDS | 25.0% |
| !!! | TGTGTTGTGATGATTTTTTT+TGG | + | chr8.3:35877786-35877805 | MS.gene71181:intron | 25.0% |
| AAACAAACTTAAGACTCAAC+CGG | + | chr8.3:35880769-35880788 | MS.gene71181:intron | 30.0% | |
| AATACGATTCGAAAGAAACA+GGG | - | chr8.3:35881232-35881251 | None:intergenic | 30.0% | |
| ACTAATATGACAGGTATTCT+AGG | - | chr8.3:35881372-35881391 | None:intergenic | 30.0% | |
| AGAGGAATTGATAGAATAGA+AGG | + | chr8.3:35879349-35879368 | MS.gene71181:intron | 30.0% | |
| ATAAATAAGTGCATGGCAAA+AGG | - | chr8.3:35880988-35881007 | None:intergenic | 30.0% | |
| ATTGAATGTATTTGAACCTC+CGG | - | chr8.3:35880140-35880159 | None:intergenic | 30.0% | |
| CTTTCATATGAGTATATGTC+AGG | + | chr8.3:35879152-35879171 | MS.gene71181:intron | 30.0% | |
| GAAAGAAAACACATTAGAGA+AGG | + | chr8.3:35879687-35879706 | MS.gene71181:CDS | 30.0% | |
| GAATTGAAACGGTTACAATT+TGG | + | chr8.3:35878050-35878069 | MS.gene71181:intron | 30.0% | |
| GGATCATTTAGGAAAAGTAA+TGG | + | chr8.3:35878752-35878771 | MS.gene71181:intron | 30.0% | |
| GTATTTGACCCAAATTTCTT+CGG | - | chr8.3:35880223-35880242 | None:intergenic | 30.0% | |
| TATTTGACCCAAATTTCTTC+GGG | - | chr8.3:35880222-35880241 | None:intergenic | 30.0% | |
| TCATTTAGGAAAAGTAATGG+TGG | + | chr8.3:35878755-35878774 | MS.gene71181:intron | 30.0% | |
| TGATAGACAAGATGAGATAA+AGG | + | chr8.3:35878438-35878457 | MS.gene71181:intron | 30.0% | |
| TGGTTGAAAACTAATATGAC+AGG | - | chr8.3:35881381-35881400 | None:intergenic | 30.0% | |
| TGTATTATGGATGTAGACAT+GGG | + | chr8.3:35878217-35878236 | MS.gene71181:intron | 30.0% | |
| TTACCTTCTTATTGAGCTTA+CGG | - | chr8.3:35879825-35879844 | None:intergenic | 30.0% | |
| TTAGCTAAACTGGATCATTT+AGG | + | chr8.3:35878741-35878760 | MS.gene71181:intron | 30.0% | |
| TTCTTGAATTGATGTCTGAT+GGG | + | chr8.3:35881820-35881839 | MS.gene71181:intron | 30.0% | |
| TTGATAGAATAGAAGGAAGA+AGG | + | chr8.3:35879356-35879375 | MS.gene71181:intron | 30.0% | |
| TTGTATTATGGATGTAGACA+TGG | + | chr8.3:35878216-35878235 | MS.gene71181:intron | 30.0% | |
| ! | AAATTGATTCTATGCCTTTG+TGG | + | chr8.3:35878352-35878371 | MS.gene71181:intron | 30.0% |
| ! | CAAATCTAAATAGTCTTGCT+TGG | - | chr8.3:35880905-35880924 | None:intergenic | 30.0% |
| ! | CAAGTTGAAGTCTGAAAATA+AGG | + | chr8.3:35877633-35877652 | MS.gene71181:CDS | 30.0% |
| ! | CATCAATCGATTATCTTTTC+AGG | + | chr8.3:35881722-35881741 | MS.gene71181:CDS | 30.0% |
| ! | CTACATAACAAAAGGCATAT+AGG | - | chr8.3:35879397-35879416 | None:intergenic | 30.0% |
| ! | GGGATTTTCTTGAATTGAAA+CGG | + | chr8.3:35878039-35878058 | MS.gene71181:intron | 30.0% |
| ! | TTTTCTTTAAGCAACATGGT+TGG | + | chr8.3:35879491-35879510 | MS.gene71181:CDS | 30.0% |
| !! | AATCGTATTCTTTTGATTGC+TGG | + | chr8.3:35881243-35881262 | MS.gene71181:intron | 30.0% |
| !! | AATTTGGTTTGAATAGTCGA+TGG | + | chr8.3:35878066-35878085 | MS.gene71181:intron | 30.0% |
| !! | GTTGTGGGTTTTGTAATTAT+TGG | + | chr8.3:35878252-35878271 | MS.gene71181:intron | 30.0% |
| !!! | CTCATTATTTTTAGTTGCTC+AGG | - | chr8.3:35879445-35879464 | None:intergenic | 30.0% |
| !!! | GGGTTTCAATTTTTTGTTGT+GGG | + | chr8.3:35878237-35878256 | MS.gene71181:intron | 30.0% |
| !!! | GTGTTCATATTAGTTTTGTG+AGG | + | chr8.3:35877912-35877931 | MS.gene71181:CDS | 30.0% |
| !!! | TACTCTGATTTTAGCTAAAC+TGG | + | chr8.3:35878731-35878750 | MS.gene71181:intron | 30.0% |
| !!! | TGGGTTTCAATTTTTTGTTG+TGG | + | chr8.3:35878236-35878255 | MS.gene71181:intron | 30.0% |
| AAAGGTAGCATATCTGTGTT+GGG | + | chr8.3:35878456-35878475 | MS.gene71181:intron | 35.0% | |
| AATAGTTGAGCTCAGTAGAA+AGG | + | chr8.3:35879848-35879867 | MS.gene71181:intron | 35.0% | |
| ACCTCTACAAAAATCAACCA+TGG | + | chr8.3:35880794-35880813 | MS.gene71181:intron | 35.0% | |
| ACTATTGTATGTGAAGCTCT+AGG | - | chr8.3:35879739-35879758 | None:intergenic | 35.0% | |
| AGAAGCAAAGTATACATCCA+GGG | + | chr8.3:35879531-35879550 | MS.gene71181:CDS | 35.0% | |
| AGAGCAATGCTTTGTGATTA+GGG | + | chr8.3:35878019-35878038 | MS.gene71181:intron | 35.0% | |
| AGCTAAAATCAGAGTAACTG+AGG | - | chr8.3:35878727-35878746 | None:intergenic | 35.0% | |
| AGTTGCACTATACAAAACAG+AGG | - | chr8.3:35880278-35880297 | None:intergenic | 35.0% | |
| ATACGATTCGAAAGAAACAG+GGG | - | chr8.3:35881231-35881250 | None:intergenic | 35.0% | |
| CAAATCCATCATGCAAAACA+TGG | + | chr8.3:35880396-35880415 | MS.gene71181:intron | 35.0% | |
| CAATACGAAGAATCCAACAT+GGG | + | chr8.3:35877829-35877848 | MS.gene71181:CDS | 35.0% | |
| CTATACAAAACAGAGGTTGA+TGG | - | chr8.3:35880271-35880290 | None:intergenic | 35.0% | |
| GAAGACAAAAATAACCCAAC+AGG | - | chr8.3:35879915-35879934 | None:intergenic | 35.0% | |
| GAAGGAAGTAGCTAAAAGTA+TGG | + | chr8.3:35879582-35879601 | MS.gene71181:CDS | 35.0% | |
| GAATACGATTCGAAAGAAAC+AGG | - | chr8.3:35881233-35881252 | None:intergenic | 35.0% | |
| GATCTACAAACTTAGACTCA+TGG | + | chr8.3:35879416-35879435 | MS.gene71181:intron | 35.0% | |
| GTTCTTGAATTGATGTCTGA+TGG | + | chr8.3:35881819-35881838 | MS.gene71181:intron | 35.0% | |
| GTTTGAATAGTCGATGGAAT+TGG | + | chr8.3:35878072-35878091 | MS.gene71181:intron | 35.0% | |
| TAAAGGTAGCATATCTGTGT+TGG | + | chr8.3:35878455-35878474 | MS.gene71181:intron | 35.0% | |
| TACCTTCTTATTGAGCTTAC+GGG | - | chr8.3:35879824-35879843 | None:intergenic | 35.0% | |
| TAGAAGCAAAGTATACATCC+AGG | + | chr8.3:35879530-35879549 | MS.gene71181:CDS | 35.0% | |
| TAGAGCAATGCTTTGTGATT+AGG | + | chr8.3:35878018-35878037 | MS.gene71181:intron | 35.0% | |
| TCAAAACGAGAAGTCATAGA+TGG | - | chr8.3:35880082-35880101 | None:intergenic | 35.0% | |
| TCAAACTTCTTTGCAGACTT+TGG | + | chr8.3:35880181-35880200 | MS.gene71181:CDS | 35.0% | |
| TTAGAACTCTGATAAGCAAC+AGG | - | chr8.3:35879634-35879653 | None:intergenic | 35.0% | |
| TTATGGTTCTTTAGCGACTA+GGG | + | chr8.3:35881443-35881462 | MS.gene71181:intron | 35.0% | |
| TTGCACTACAATCAATAGAG+AGG | + | chr8.3:35879331-35879350 | MS.gene71181:intron | 35.0% | |
| TTTATGGTTCTTTAGCGACT+AGG | + | chr8.3:35881442-35881461 | MS.gene71181:intron | 35.0% | |
| ! | AAAAGTATGGCTGAAGAGAA+AGG | + | chr8.3:35879595-35879614 | MS.gene71181:CDS | 35.0% |
| ! | ATTCAAGAAGCACAACAACA+TGG | - | chr8.3:35878987-35879006 | None:intergenic | 35.0% |
| ! | GCAAAGAAGTTTGATGACTT+CGG | - | chr8.3:35880175-35880194 | None:intergenic | 35.0% |
| ! | GTGGTCAGCTTAAACAATTT+TGG | + | chr8.3:35880308-35880327 | MS.gene71181:intron | 35.0% |
| ! | GTTGCTTATCAGAGTTCTAA+TGG | + | chr8.3:35879634-35879653 | MS.gene71181:CDS | 35.0% |
| ! | GTTTTCTTTCAGTACCTCAT+TGG | - | chr8.3:35879677-35879696 | None:intergenic | 35.0% |
| ! | TAGTCACTCTTGTTACTTCA+GGG | + | chr8.3:35881624-35881643 | MS.gene71181:intron | 35.0% |
| ! | TGCTTCTATTTTACCACCAT+CGG | - | chr8.3:35879518-35879537 | None:intergenic | 35.0% |
| !! | AAAGTGTTGTGTAACAACCA+TGG | - | chr8.3:35880814-35880833 | None:intergenic | 35.0% |
| !! | ACCATGGTTGATTTTTGTAG+AGG | - | chr8.3:35880798-35880817 | None:intergenic | 35.0% |
| !! | GACTTCTCGTTTTGAATATG+TGG | + | chr8.3:35880087-35880106 | MS.gene71181:CDS | 35.0% |
| !! | TGTCTTACATGGTTTTGCAA+GGG | + | chr8.3:35880680-35880699 | MS.gene71181:intron | 35.0% |
| !!! | CTGCGTCTTTGTTTTATACT+TGG | + | chr8.3:35879295-35879314 | MS.gene71181:intron | 35.0% |
| !!! | TTGATTTTTGTAGAGGTGTC+CGG | - | chr8.3:35880791-35880810 | None:intergenic | 35.0% |
| AAAAAAATCCGCACTGGAGA+TGG | - | chr8.3:35881658-35881677 | None:intergenic | 40.0% | |
| AAGATCAATGGAGGAATCTC+CGG | - | chr8.3:35881688-35881707 | None:intergenic | 40.0% | |
| AAGGTAGCATATCTGTGTTG+GGG | + | chr8.3:35878457-35878476 | MS.gene71181:intron | 40.0% | |
| AAGGTATGGTCTGTCTTACA+TGG | + | chr8.3:35880669-35880688 | MS.gene71181:intron | 40.0% | |
| AATCAGGATTGGGAGGAAAA+GGG | - | chr8.3:35881855-35881874 | None:intergenic | 40.0% | |
| AGTGGTTTCCCGAAGAAATT+TGG | + | chr8.3:35880211-35880230 | MS.gene71181:CDS | 40.0% | |
| ATAGTCGATGGAATTGGACT+CGG | + | chr8.3:35878078-35878097 | MS.gene71181:intron | 40.0% | |
| ATCCATCATGCAAAACATGG+TGG | + | chr8.3:35880399-35880418 | MS.gene71181:intron | 40.0% | |
| CAGCAATCATCTTTCAATCC+TGG | - | chr8.3:35878900-35878919 | None:intergenic | 40.0% | |
| CCTGCAAAACAATCAGGATT+GGG | - | chr8.3:35881865-35881884 | None:intergenic | 40.0% | |
| CTCTCCTGCAATGTTCTTAA+GGG | - | chr8.3:35881906-35881925 | None:intergenic | 40.0% | |
| GAGTAACTGAGGACAAAGTA+TGG | - | chr8.3:35878716-35878735 | None:intergenic | 40.0% | |
| GCAATACGAAGAATCCAACA+TGG | + | chr8.3:35877828-35877847 | MS.gene71181:CDS | 40.0% | |
| GTACAAGCAAATTCTTGCGA+AGG | + | chr8.3:35879564-35879583 | MS.gene71181:CDS | 40.0% | |
| GTGGTTTCCCGAAGAAATTT+GGG | + | chr8.3:35880212-35880231 | MS.gene71181:CDS | 40.0% | |
| GTTAGTGTTGTGTTGTGCAT+TGG | + | chr8.3:35877970-35877989 | MS.gene71181:intron | 40.0% | |
| GTTCCATAGAGACTAGGAAA+GGG | - | chr8.3:35881350-35881369 | None:intergenic | 40.0% | |
| TAGGAAAAGTAATGGTGGCT+GGG | + | chr8.3:35878760-35878779 | MS.gene71181:intron | 40.0% | |
| TAGTGATTTCCCCGCATTAA+AGG | + | chr8.3:35878675-35878694 | MS.gene71181:intron | 40.0% | |
| TATCTTGATTGCATGTGCAG+AGG | + | chr8.3:35880623-35880642 | MS.gene71181:intron | 40.0% | |
| TATGGTTCTTTAGCGACTAG+GGG | + | chr8.3:35881444-35881463 | MS.gene71181:intron | 40.0% | |
| TCACTTGGCTACATTTGACA+AGG | - | chr8.3:35879983-35880002 | None:intergenic | 40.0% | |
| TCTCTCCTGCAATGTTCTTA+AGG | - | chr8.3:35881907-35881926 | None:intergenic | 40.0% | |
| TCTGAAGACGAGGTTCTTAT+CGG | - | chr8.3:35877608-35877627 | None:intergenic | 40.0% | |
| TCTTCCCTTAAGAACATTGC+AGG | + | chr8.3:35881899-35881918 | MS.gene71181:CDS | 40.0% | |
| TGAGGACAAAGTATGGAATC+TGG | - | chr8.3:35878709-35878728 | None:intergenic | 40.0% | |
| TGATAAGCAACAGGTGATGA+AGG | - | chr8.3:35879625-35879644 | None:intergenic | 40.0% | |
| TTAGGAAAAGTAATGGTGGC+TGG | + | chr8.3:35878759-35878778 | MS.gene71181:intron | 40.0% | |
| TTCCATAGAGACTAGGAAAG+GGG | - | chr8.3:35881349-35881368 | None:intergenic | 40.0% | |
| TTCTAGGTTCCATAGAGACT+AGG | - | chr8.3:35881356-35881375 | None:intergenic | 40.0% | |
| TTGATTCTATGCCTTTGTGG+CGG | + | chr8.3:35878355-35878374 | MS.gene71181:intron | 40.0% | |
| ! | CTAGTCACTCTTGTTACTTC+AGG | + | chr8.3:35881623-35881642 | MS.gene71181:intron | 40.0% |
| ! | CTATTGGTGGTAAAAAGCCT+GGG | + | chr8.3:35879779-35879798 | MS.gene71181:CDS | 40.0% |
| ! | CTTCTTTGCAGACTTTGGAA+TGG | + | chr8.3:35880186-35880205 | MS.gene71181:CDS | 40.0% |
| ! | TCTATTGGTGGTAAAAAGCC+TGG | + | chr8.3:35879778-35879797 | MS.gene71181:CDS | 40.0% |
| ! | TTCCACCATGTTTTGCATGA+TGG | - | chr8.3:35880404-35880423 | None:intergenic | 40.0% |
| !! | AAAACAGAGGTTGATGGCAT+AGG | - | chr8.3:35880265-35880284 | None:intergenic | 40.0% |
| !! | AAACAGAGGTTGATGGCATA+GGG | - | chr8.3:35880264-35880283 | None:intergenic | 40.0% |
| !! | ACATTGTTGTTTGTCGTGGA+TGG | - | chr8.3:35880049-35880068 | None:intergenic | 40.0% |
| !! | ACTTGAGTTTTCTGAAGACG+AGG | - | chr8.3:35877618-35877637 | None:intergenic | 40.0% |
| !! | AGACACATTGTTGTTTGTCG+TGG | - | chr8.3:35880053-35880072 | None:intergenic | 40.0% |
| !! | CTGTCTTACATGGTTTTGCA+AGG | + | chr8.3:35880679-35880698 | MS.gene71181:intron | 40.0% |
| !! | GTCTTACATGGTTTTGCAAG+GGG | + | chr8.3:35880681-35880700 | MS.gene71181:intron | 40.0% |
| !! | TGGAAAGTGCTGACATCAAA+GGG | + | chr8.3:35880419-35880438 | MS.gene71181:intron | 40.0% |
| !!! | ATCTCCAGTGCGGATTTTTT+TGG | + | chr8.3:35881657-35881676 | MS.gene71181:CDS | 40.0% |
| !!! | TCTCCTTTTTTGCATGCGTT+GGG | + | chr8.3:35878326-35878345 | MS.gene71181:intron | 40.0% |
| AACACCGAGACTTCGATGAA+CGG | - | chr8.3:35877897-35877916 | None:intergenic | 45.0% | |
| AACCCCTTTCCTAGTCTCTA+TGG | + | chr8.3:35881344-35881363 | MS.gene71181:intron | 45.0% | |
| AAGAACATTGCAGGAGAGAC+TGG | + | chr8.3:35881908-35881927 | MS.gene71181:CDS | 45.0% | |
| AAGATCTGTCATCAAGGAGG+AGG | - | chr8.3:35881954-35881973 | None:intergenic | 45.0% | |
| AATAACCCAACAGGCAGTTC+CGG | - | chr8.3:35879906-35879925 | None:intergenic | 45.0% | |
| AGAACATTGCAGGAGAGACT+GGG | + | chr8.3:35881909-35881928 | MS.gene71181:CDS | 45.0% | |
| AGGTAGCATATCTGTGTTGG+GGG | + | chr8.3:35878458-35878477 | MS.gene71181:intron | 45.0% | |
| ATCAGGATTGGGAGGAAAAG+GGG | - | chr8.3:35881854-35881873 | None:intergenic | 45.0% | |
| ATCGCTAGCAGCAAGATCAA+TGG | - | chr8.3:35881700-35881719 | None:intergenic | 45.0% | |
| ATGGTTCTTTAGCGACTAGG+GGG | + | chr8.3:35881445-35881464 | MS.gene71181:intron | 45.0% | |
| CAAACAACAATGTGTCTGCC+AGG | + | chr8.3:35880056-35880075 | MS.gene71181:CDS | 45.0% | |
| CAACCCAACGCATGCAAAAA+AGG | - | chr8.3:35878332-35878351 | None:intergenic | 45.0% | |
| CAACGCATGCAAAAAAGGAG+AGG | - | chr8.3:35878327-35878346 | None:intergenic | 45.0% | |
| CAATCAGGATTGGGAGGAAA+AGG | - | chr8.3:35881856-35881875 | None:intergenic | 45.0% | |
| CTGAAGATCTGTCATCAAGG+AGG | - | chr8.3:35881957-35881976 | None:intergenic | 45.0% | |
| GCAAAACAATCAGGATTGGG+AGG | - | chr8.3:35881862-35881881 | None:intergenic | 45.0% | |
| GCCTGCAAAACAATCAGGAT+TGG | - | chr8.3:35881866-35881885 | None:intergenic | 45.0% | |
| GGTTCCATAGAGACTAGGAA+AGG | - | chr8.3:35881351-35881370 | None:intergenic | 45.0% | |
| GTAAAAAGCCTGGGAAGAGT+GGG | + | chr8.3:35879788-35879807 | MS.gene71181:CDS | 45.0% | |
| GTCACCAAAAAAATCCGCAC+TGG | - | chr8.3:35881664-35881683 | None:intergenic | 45.0% | |
| GTCCTGAAGATCTGTCATCA+AGG | - | chr8.3:35881960-35881979 | None:intergenic | 45.0% | |
| GTTGTGCCTGCAAAACAATC+AGG | - | chr8.3:35881871-35881890 | None:intergenic | 45.0% | |
| TAAAAAGCCTGGGAAGAGTG+GGG | + | chr8.3:35879789-35879808 | MS.gene71181:CDS | 45.0% | |
| TAATGTCCAGTCGTCTGAGT+TGG | + | chr8.3:35880111-35880130 | MS.gene71181:CDS | 45.0% | |
| TGATTCTATGCCTTTGTGGC+GGG | + | chr8.3:35878356-35878375 | MS.gene71181:intron | 45.0% | |
| TGATTGCATGTGCAGAGGTT+GGG | + | chr8.3:35880628-35880647 | MS.gene71181:intron | 45.0% | |
| TGCCCGTAAGCTCAATAAGA+AGG | + | chr8.3:35879819-35879838 | MS.gene71181:CDS | 45.0% | |
| TGCTCATAGAGAGACTCACT+TGG | - | chr8.3:35879998-35880017 | None:intergenic | 45.0% | |
| TGGATCCGCTACCTTTAATG+CGG | - | chr8.3:35878689-35878708 | None:intergenic | 45.0% | |
| TGGGAAAAAACTCAGCTCCT+TGG | + | chr8.3:35881928-35881947 | MS.gene71181:CDS | 45.0% | |
| TTGATTGCATGTGCAGAGGT+TGG | + | chr8.3:35880627-35880646 | MS.gene71181:intron | 45.0% | |
| TTGTTTGTCGTGGATGGAAC+TGG | - | chr8.3:35880043-35880062 | None:intergenic | 45.0% | |
| TTTCCCCGCATTAAAGGTAG+CGG | + | chr8.3:35878681-35878700 | MS.gene71181:intron | 45.0% | |
| ! | AGGGCTTACTTGCACTTTTG+AGG | - | chr8.3:35880245-35880264 | None:intergenic | 45.0% |
| ! | CAGCATCTCTTGCTTTGTTC+TGG | - | chr8.3:35881110-35881129 | None:intergenic | 45.0% |
| ! | CTCCTTGATGACAGATCTTC+AGG | + | chr8.3:35881955-35881974 | MS.gene71181:CDS | 45.0% |
| ! | GGGGCACTCTTACATTATCA+AGG | + | chr8.3:35881464-35881483 | MS.gene71181:intron | 45.0% |
| !! | CAGAGTTCTAATGGACTTCC+TGG | + | chr8.3:35879643-35879662 | MS.gene71181:CDS | 45.0% |
| !! | CCCAATCCTGATTGTTTTGC+AGG | + | chr8.3:35881862-35881881 | MS.gene71181:intron | 45.0% |
| !! | GATTGTTTTGCAGGCACAAC+AGG | + | chr8.3:35881871-35881890 | MS.gene71181:intron | 45.0% |
| !! | GCAGACTTTGGAATGGATAG+TGG | + | chr8.3:35880193-35880212 | MS.gene71181:CDS | 45.0% |
| !! | GTGGAAAGTGCTGACATCAA+AGG | + | chr8.3:35880418-35880437 | MS.gene71181:intron | 45.0% |
| !!! | CTCTCCTTTTTTGCATGCGT+TGG | + | chr8.3:35878325-35878344 | MS.gene71181:intron | 45.0% |
| !!! | GCGGATTTTTTTGGTGACTC+CGG | + | chr8.3:35881666-35881685 | MS.gene71181:CDS | 45.0% |
| AAAAAGCCTGGGAAGAGTGG+GGG | + | chr8.3:35879790-35879809 | MS.gene71181:CDS | 50.0% | |
| AAGCAACATGGTTGGACCGA+TGG | + | chr8.3:35879499-35879518 | MS.gene71181:CDS | 50.0% | |
| ACATGGGCGTCAGTAACGTA+TGG | + | chr8.3:35877845-35877864 | MS.gene71181:CDS | 50.0% | |
| ACGAGAAGTCATAGATGGCC+TGG | - | chr8.3:35880077-35880096 | None:intergenic | 50.0% | |
| AGTGCAACTTCTACTGCACG+TGG | + | chr8.3:35880289-35880308 | MS.gene71181:intron | 50.0% | |
| CATGGGCGTCAGTAACGTAT+GGG | + | chr8.3:35877846-35877865 | MS.gene71181:CDS | 50.0% | |
| CGGCAGAACAATCAATGCAG+AGG | - | chr8.3:35877877-35877896 | None:intergenic | 50.0% | |
| GATCCGCTACCTTTAATGCG+GGG | - | chr8.3:35878687-35878706 | None:intergenic | 50.0% | |
| GATTCTATGCCTTTGTGGCG+GGG | + | chr8.3:35878357-35878376 | MS.gene71181:intron | 50.0% | |
| GCTAGCAGCAAGATCAATGG+AGG | - | chr8.3:35881697-35881716 | None:intergenic | 50.0% | |
| GGATCCGCTACCTTTAATGC+GGG | - | chr8.3:35878688-35878707 | None:intergenic | 50.0% | |
| GGTAAAAAGCCTGGGAAGAG+TGG | + | chr8.3:35879787-35879806 | MS.gene71181:CDS | 50.0% | |
| GGTAGCATATCTGTGTTGGG+GGG | + | chr8.3:35878459-35878478 | MS.gene71181:intron | 50.0% | |
| GTAGCATATCTGTGTTGGGG+GGG | + | chr8.3:35878460-35878479 | MS.gene71181:intron | 50.0% | |
| GTATACCGGAACTGCCTGTT+GGG | + | chr8.3:35879898-35879917 | MS.gene71181:intron | 50.0% | |
| TACGTTACTGACGCCCATGT+TGG | - | chr8.3:35877845-35877864 | None:intergenic | 50.0% | |
| TCTGCCGTTCATCGAAGTCT+CGG | + | chr8.3:35877890-35877909 | MS.gene71181:CDS | 50.0% | |
| TGTATACCGGAACTGCCTGT+TGG | + | chr8.3:35879897-35879916 | MS.gene71181:intron | 50.0% | |
| ! | CAGTCGTCTGAGTTGGATTC+CGG | + | chr8.3:35880118-35880137 | MS.gene71181:CDS | 50.0% |
| ACTGGAGCAGGTGGTTCTTC+AGG | - | chr8.3:35880025-35880044 | None:intergenic | 55.0% | |
| CAACATGGTTGGACCGATGG+TGG | + | chr8.3:35879502-35879521 | MS.gene71181:CDS | 55.0% | |
| CATATCTGTGTTGGGGGGGA+TGG | + | chr8.3:35878464-35878483 | MS.gene71181:intron | 55.0% | |
| CGGAATCCAACTCAGACGAC+TGG | - | chr8.3:35880120-35880139 | None:intergenic | 55.0% | |
| CTTGTACAACTCTGCAGCCC+TGG | - | chr8.3:35879551-35879570 | None:intergenic | 55.0% | |
| GTCGATGGAATTGGACTCGG+AGG | + | chr8.3:35878081-35878100 | MS.gene71181:intron | 55.0% | |
| TGTCATCAAGGAGGAGGCCA+AGG | - | chr8.3:35881948-35881967 | None:intergenic | 55.0% | |
| TTCGTCTGCCATCTCCAGTG+CGG | + | chr8.3:35881647-35881666 | MS.gene71181:CDS | 55.0% | |
| ! | TCGTCTGAGTTGGATTCCGG+AGG | + | chr8.3:35880121-35880140 | MS.gene71181:CDS | 55.0% |
| !! | CTAATGGACTTCCTGGCGTC+AGG | + | chr8.3:35879650-35879669 | MS.gene71181:CDS | 55.0% |
| ACCTCATTGGTCCTGACGCC+AGG | - | chr8.3:35879664-35879683 | None:intergenic | 60.0% | |
| GTCGTGGATGGAACTGGAGC+AGG | - | chr8.3:35880037-35880056 | None:intergenic | 60.0% | |
| GTGGATGGAACTGGAGCAGG+TGG | - | chr8.3:35880034-35880053 | None:intergenic | 60.0% | |
| TCCTGGCGTCAGGACCAATG+AGG | + | chr8.3:35879660-35879679 | MS.gene71181:CDS | 60.0% | |
| CCAAGTCCCCCACTCTTCCC+AGG | - | chr8.3:35879799-35879818 | None:intergenic | 65.0% | |
| CCTGGGAAGAGTGGGGGACT+TGG | + | chr8.3:35879796-35879815 | MS.gene71181:CDS | 65.0% | |
| CGGTGACTTCCCCGCCACAA+AGG | - | chr8.3:35878369-35878388 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 35877586 | 35881991 | 35877586 | ID=MS.gene71181 |
| chr8.3 | mRNA | 35877586 | 35881991 | 35877586 | ID=MS.gene71181.t1;Parent=MS.gene71181 |
| chr8.3 | exon | 35877586 | 35877654 | 35877586 | ID=MS.gene71181.t1.exon1;Parent=MS.gene71181.t1 |
| chr8.3 | CDS | 35877586 | 35877654 | 35877586 | ID=cds.MS.gene71181.t1;Parent=MS.gene71181.t1 |
| chr8.3 | exon | 35877815 | 35877933 | 35877815 | ID=MS.gene71181.t1.exon2;Parent=MS.gene71181.t1 |
| chr8.3 | CDS | 35877815 | 35877933 | 35877815 | ID=cds.MS.gene71181.t1;Parent=MS.gene71181.t1 |
| chr8.3 | exon | 35879417 | 35879840 | 35879417 | ID=MS.gene71181.t1.exon3;Parent=MS.gene71181.t1 |
| chr8.3 | CDS | 35879417 | 35879840 | 35879417 | ID=cds.MS.gene71181.t1;Parent=MS.gene71181.t1 |
| chr8.3 | exon | 35879995 | 35880255 | 35879995 | ID=MS.gene71181.t1.exon4;Parent=MS.gene71181.t1 |
| chr8.3 | CDS | 35879995 | 35880255 | 35879995 | ID=cds.MS.gene71181.t1;Parent=MS.gene71181.t1 |
| chr8.3 | exon | 35881033 | 35881158 | 35881033 | ID=MS.gene71181.t1.exon5;Parent=MS.gene71181.t1 |
| chr8.3 | CDS | 35881033 | 35881158 | 35881033 | ID=cds.MS.gene71181.t1;Parent=MS.gene71181.t1 |
| chr8.3 | exon | 35881645 | 35881743 | 35881645 | ID=MS.gene71181.t1.exon6;Parent=MS.gene71181.t1 |
| chr8.3 | CDS | 35881645 | 35881743 | 35881645 | ID=cds.MS.gene71181.t1;Parent=MS.gene71181.t1 |
| chr8.3 | exon | 35881884 | 35881991 | 35881884 | ID=MS.gene71181.t1.exon7;Parent=MS.gene71181.t1 |
| chr8.3 | CDS | 35881884 | 35881991 | 35881884 | ID=cds.MS.gene71181.t1;Parent=MS.gene71181.t1 |
| Gene Sequence |
| Protein sequence |
