Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011102.t1 | XP_013444225.1 | 97.4 | 305 | 8 | 0 | 1 | 305 | 1 | 305 | 1.60E-175 | 625.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011102.t1 | Q8L799 | 75.9 | 311 | 69 | 2 | 1 | 305 | 1 | 311 | 3.6e-139 | 495.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011102.t1 | A0A072TLF4 | 97.4 | 305 | 8 | 0 | 1 | 305 | 1 | 305 | 1.2e-175 | 625.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene011102 | MS.gene029672 | PPI |
| MS.gene011102 | MS.gene031072 | PPI |
| MS.gene011102 | MS.gene035175 | PPI |
| MS.gene011102 | MS.gene58966 | PPI |
| MS.gene011102 | MS.gene52552 | PPI |
| MS.gene011102 | MS.gene62709 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011102.t1 | MTR_8g015220 | 97.377 | 305 | 8 | 0 | 1 | 305 | 1 | 305 | 0.0 | 622 |
| MS.gene011102.t1 | MTR_8g015220 | 97.026 | 269 | 8 | 0 | 1 | 269 | 1 | 269 | 0.0 | 550 |
| MS.gene011102.t1 | MTR_8g102150 | 72.555 | 317 | 74 | 3 | 1 | 305 | 1 | 316 | 5.88e-172 | 479 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011102.t1 | AT1G14520 | 76.699 | 309 | 68 | 2 | 1 | 305 | 1 | 309 | 7.25e-179 | 496 |
| MS.gene011102.t1 | AT1G14520 | 75.962 | 312 | 67 | 2 | 1 | 305 | 1 | 311 | 5.54e-178 | 494 |
| MS.gene011102.t1 | AT1G14520 | 75.962 | 312 | 67 | 2 | 1 | 305 | 1 | 311 | 5.54e-178 | 494 |
| MS.gene011102.t1 | AT1G14520 | 75.658 | 304 | 66 | 2 | 1 | 297 | 1 | 303 | 1.20e-170 | 476 |
| MS.gene011102.t1 | AT2G19800 | 71.384 | 318 | 77 | 4 | 1 | 305 | 1 | 317 | 1.92e-168 | 470 |
| MS.gene011102.t1 | AT4G26260 | 75.000 | 296 | 61 | 1 | 23 | 305 | 22 | 317 | 3.62e-168 | 469 |
| MS.gene011102.t1 | AT4G26260 | 75.000 | 296 | 61 | 1 | 23 | 305 | 23 | 318 | 4.88e-168 | 469 |
| MS.gene011102.t1 | AT5G56640 | 75.090 | 277 | 68 | 1 | 30 | 305 | 8 | 284 | 8.33e-161 | 449 |
| MS.gene011102.t1 | AT5G56640 | 75.090 | 277 | 68 | 1 | 30 | 305 | 38 | 314 | 8.83e-161 | 451 |
Find 65 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGATCAACATGATTATTT+TGG | 0.174005 | 8.3:+73749947 | MS.gene011102:CDS |
| GTGCTTCTCCTTCCTAGTTT+TGG | 0.177602 | 8.3:+73752381 | MS.gene011102:CDS |
| AAGAAAATGAGAGAGGAATA+TGG | 0.276757 | 8.3:+73752026 | MS.gene011102:CDS |
| TTTCACCACTTCAGCTTTGC+AGG | 0.279549 | 8.3:-73753570 | None:intergenic |
| ATGCCACAGGCCAACTCATT+TGG | 0.285670 | 8.3:+73750620 | MS.gene011102:CDS |
| GAAGATTGGCTGCACTTAAC+TGG | 0.338706 | 8.3:+73752194 | MS.gene011102:CDS |
| TCTGCATACAACACTAGATA+TGG | 0.369151 | 8.3:+73752801 | MS.gene011102:CDS |
| TCATCAAATCTGCAACCAAC+TGG | 0.370493 | 8.3:-73752632 | None:intergenic |
| TAGCTTCAGCTGTTTGTAGA+AGG | 0.371351 | 8.3:-73752151 | None:intergenic |
| TCAATGAGGGAGATGTAGTA+TGG | 0.376465 | 8.3:-73753412 | None:intergenic |
| AGGAATATGGGAAATTGAAC+AGG | 0.376983 | 8.3:+73752039 | MS.gene011102:CDS |
| TATGCAGAGTTGTTATAGTC+TGG | 0.382673 | 8.3:-73752786 | None:intergenic |
| TGCCACAGGCCAACTCATTT+GGG | 0.406137 | 8.3:+73750621 | MS.gene011102:CDS |
| ATTTGTGGTTCATCCAAGTC+AGG | 0.423334 | 8.3:-73752122 | None:intergenic |
| AAGTGCAGCCAATCTTCATT+TGG | 0.432228 | 8.3:-73752188 | None:intergenic |
| CTTCCTCAATGGGCTGTTGT+AGG | 0.436720 | 8.3:+73752408 | MS.gene011102:CDS |
| ACAGGGTAGAGATGAGCATA+TGG | 0.463184 | 8.3:+73752057 | MS.gene011102:CDS |
| GAGATTAAGTACCATGGATA+AGG | 0.469407 | 8.3:-73752217 | None:intergenic |
| TGTAGAAGGTGCTCAATTTG+TGG | 0.482816 | 8.3:-73752137 | None:intergenic |
| AGGACTATCCAAATGAAGAT+TGG | 0.484923 | 8.3:+73752180 | MS.gene011102:CDS |
| AGAAAATGAGAGAGGAATAT+GGG | 0.491901 | 8.3:+73752027 | MS.gene011102:CDS |
| CTACATCTCCCTCATTGAAA+AGG | 0.497519 | 8.3:+73753417 | MS.gene011102:CDS |
| AGGATGTTGAGAACTTGAAA+TGG | 0.504789 | 8.3:+73753208 | MS.gene011102:CDS |
| CACTTAACTGGCCTTATCCA+TGG | 0.511389 | 8.3:+73752206 | MS.gene011102:CDS |
| TGAACTTACCATAAAATGAA+TGG | 0.516608 | 8.3:-73753034 | None:intergenic |
| AACAGCTGAAGCTATAAGAA+AGG | 0.518742 | 8.3:+73752160 | MS.gene011102:CDS |
| TGCTTACAAAATCAAAGGAT+TGG | 0.521858 | 8.3:-73751870 | None:intergenic |
| ACTTCCCTGCAAAGCTGAAG+TGG | 0.537264 | 8.3:+73753565 | MS.gene011102:CDS |
| AGTGAGAGTTGATGTTGAAA+AGG | 0.538804 | 8.3:+73753384 | MS.gene011102:CDS |
| GCTGAAAGTGAGAGGCAAGA+AGG | 0.539626 | 8.3:+73751814 | MS.gene011102:CDS |
| TAATGAGACAGAAGTGGAGT+TGG | 0.543730 | 8.3:+73750583 | MS.gene011102:CDS |
| TTAACAATGTCATGATGTCA+TGG | 0.550047 | 8.3:+73752847 | MS.gene011102:CDS |
| AAGTGAGAGGCAAGAAGGAG+TGG | 0.553115 | 8.3:+73751819 | MS.gene011102:CDS |
| GGATGAGAGTGACCCTGACT+TGG | 0.554579 | 8.3:+73752109 | MS.gene011102:CDS |
| TGGTGGATTTGTTATGCCAC+AGG | 0.555652 | 8.3:+73750607 | MS.gene011102:CDS |
| TTTGTAGCTTTACATAGGGA+AGG | 0.563583 | 8.3:+73753159 | MS.gene011102:intron |
| GATTACCTTGTGGTGGACAA+TGG | 0.568396 | 8.3:-73752657 | None:intergenic |
| TAACAATGTCATGATGTCAT+GGG | 0.569057 | 8.3:+73752848 | MS.gene011102:CDS |
| GTAGATGCTTACAAAATCAA+AGG | 0.571608 | 8.3:-73751875 | None:intergenic |
| ACAGGTGAAGAAAATGAGAG+AGG | 0.577648 | 8.3:+73752019 | MS.gene011102:intron |
| AAAAGTGTGCCCAAATGAGT+TGG | 0.577893 | 8.3:-73750630 | None:intergenic |
| CATCAAATCTGCAACCAACT+GGG | 0.577918 | 8.3:-73752631 | None:intergenic |
| CAGGGTAGAGATGAGCATAT+GGG | 0.584187 | 8.3:+73752058 | MS.gene011102:CDS |
| ACAGAAGTGGAGTTGGATGG+TGG | 0.584861 | 8.3:+73750590 | MS.gene011102:CDS |
| GGAATTTACTCTGAGAAATG+TGG | 0.598713 | 8.3:+73752822 | MS.gene011102:CDS |
| TTCACCACTTCAGCTTTGCA+GGG | 0.603653 | 8.3:-73753569 | None:intergenic |
| GAATAAGACTACTCTACCCT+CGG | 0.603870 | 8.3:+73752989 | MS.gene011102:CDS |
| TATGATGAACATAGCAGCCG+AGG | 0.612512 | 8.3:-73753006 | None:intergenic |
| TTTGTGGTTCATCCAAGTCA+GGG | 0.617345 | 8.3:-73752121 | None:intergenic |
| GTTGAATGATTACCTTGTGG+TGG | 0.621848 | 8.3:-73752664 | None:intergenic |
| ATCTGATGTTGAGTCAAAGA+CGG | 0.628431 | 8.3:+73750553 | MS.gene011102:CDS |
| GGTTGTTAATGAGACAGAAG+TGG | 0.629085 | 8.3:+73750577 | MS.gene011102:CDS |
| GAGACAGAAGTGGAGTTGGA+TGG | 0.629372 | 8.3:+73750587 | MS.gene011102:CDS |
| ATTATGCTGCTGAAAGTGAG+AGG | 0.640938 | 8.3:+73751806 | MS.gene011102:CDS |
| TGAACTTCTGAATGAAGTGG+TGG | 0.645478 | 8.3:+73752088 | MS.gene011102:CDS |
| TAAACACTTGATGAATGATG+AGG | 0.651355 | 8.3:+73753188 | MS.gene011102:CDS |
| AACAATGTCATGATGTCATG+GGG | 0.651705 | 8.3:+73752849 | MS.gene011102:CDS |
| ATAGGTGACATATACCCAGT+TGG | 0.653485 | 8.3:+73752617 | MS.gene011102:intron |
| TGAATCCATTGTCCACCACA+AGG | 0.657684 | 8.3:+73752652 | MS.gene011102:CDS |
| TTGTGAACTTCTGAATGAAG+TGG | 0.665499 | 8.3:+73752085 | MS.gene011102:CDS |
| TGCCCAAATGAGTTGGCCTG+TGG | 0.666895 | 8.3:-73750623 | None:intergenic |
| GGAATATGGGAAATTGAACA+GGG | 0.669328 | 8.3:+73752040 | MS.gene011102:CDS |
| TTGCCTACAACAGCCCATTG+AGG | 0.671226 | 8.3:-73752411 | None:intergenic |
| ATGATGAACATAGCAGCCGA+GGG | 0.676043 | 8.3:-73753005 | None:intergenic |
| TGATGTTGAGTCAAAGACGG+TGG | 0.761342 | 8.3:+73750556 | MS.gene011102:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAATTAGAGTTTAA+TGG | + | chr8.3:73750710-73750729 | MS.gene011102:intron | 10.0% |
| !! | AAAAATATTATAACATATAC+AGG | + | chr8.3:73752001-73752020 | MS.gene011102:intron | 10.0% |
| !! | TAAATAAATTCAGATAAAAT+TGG | + | chr8.3:73751011-73751030 | MS.gene011102:intron | 10.0% |
| !! | TTACATTTATATAATATTAG+CGG | + | chr8.3:73752442-73752461 | MS.gene011102:intron | 10.0% |
| !!! | TTTCAAACATATTTTTTAAA+CGG | - | chr8.3:73751227-73751246 | None:intergenic | 10.0% |
| !!! | TTTGTTTTCTATTAATTAAT+TGG | + | chr8.3:73750502-73750521 | MS.gene011102:intron | 10.0% |
| !! | AAAAATAAATGAAAGATTTG+TGG | - | chr8.3:73751900-73751919 | None:intergenic | 15.0% |
| !! | ACAAGTTAAAAAGTTAATTA+AGG | + | chr8.3:73751071-73751090 | MS.gene011102:intron | 15.0% |
| !! | ATACATAAGTTACAATTAAA+GGG | - | chr8.3:73750218-73750237 | None:intergenic | 15.0% |
| !! | TATACATAAGTTACAATTAA+AGG | - | chr8.3:73750219-73750238 | None:intergenic | 15.0% |
| !!! | CTAAAAAAATTAGAGTTTTA+TGG | + | chr8.3:73750802-73750821 | MS.gene011102:intron | 15.0% |
| !!! | GAACTTTTAATGTTAATTTT+TGG | - | chr8.3:73753084-73753103 | None:intergenic | 15.0% |
| !!! | GAAGAAAGTTTTAAAAATTT+GGG | + | chr8.3:73752943-73752962 | MS.gene011102:intron | 15.0% |
| !!! | GTAAATTAATAGTCTTTTTT+TGG | + | chr8.3:73750735-73750754 | MS.gene011102:intron | 15.0% |
| !!! | TGAAGAAAGTTTTAAAAATT+TGG | + | chr8.3:73752942-73752961 | MS.gene011102:intron | 15.0% |
| !!! | TTAGAGAATATATTCATTTT+TGG | - | chr8.3:73751570-73751589 | None:intergenic | 15.0% |
| !!! | TTTTTTATATCGAATTTAGA+TGG | + | chr8.3:73750949-73750968 | MS.gene011102:intron | 15.0% |
| !! | AATTGGTTATTAAACCAAAA+AGG | - | chr8.3:73752337-73752356 | None:intergenic | 20.0% |
| !! | AGTAAAAACTTAATAACTCT+AGG | - | chr8.3:73753522-73753541 | None:intergenic | 20.0% |
| !! | ATATAATATTAGCGGAAAAA+CGG | + | chr8.3:73752450-73752469 | MS.gene011102:intron | 20.0% |
| !! | ATTGGTTATTAAACCAAAAA+GGG | - | chr8.3:73752336-73752355 | None:intergenic | 20.0% |
| !! | CATGTAGAAAAAACAAATTA+TGG | + | chr8.3:73752709-73752728 | MS.gene011102:intron | 20.0% |
| !! | TTGGAAATGTAACATATATT+AGG | - | chr8.3:73752745-73752764 | None:intergenic | 20.0% |
| !!! | AAAAAATTAGAGTTTTATGG+TGG | + | chr8.3:73750805-73750824 | MS.gene011102:intron | 20.0% |
| !!! | ACATTGAATTGAATTTTGAA+AGG | - | chr8.3:73752903-73752922 | None:intergenic | 20.0% |
| !!! | ACGCTTTTATATTGATATAT+CGG | - | chr8.3:73752487-73752506 | None:intergenic | 20.0% |
| !!! | AGCTATTTTTAATCATAATC+AGG | + | chr8.3:73751782-73751801 | MS.gene011102:intron | 20.0% |
| !!! | ATAAGATACCATTCATTTTA+TGG | + | chr8.3:73753026-73753045 | MS.gene011102:CDS | 20.0% |
| !!! | ATTGATCAACATGATTATTT+TGG | + | chr8.3:73749947-73749966 | MS.gene011102:CDS | 20.0% |
| !!! | CATTCAACTTATTTTCTATT+TGG | + | chr8.3:73752679-73752698 | MS.gene011102:intron | 20.0% |
| !!! | CATTTTTTTGGCAAAATTTA+TGG | + | chr8.3:73750032-73750051 | MS.gene011102:intron | 20.0% |
| !!! | GCCAAAAAAATGAAATTTTT+GGG | - | chr8.3:73750024-73750043 | None:intergenic | 20.0% |
| !!! | GCTATTTTTAATCATAATCA+GGG | + | chr8.3:73751783-73751802 | MS.gene011102:intron | 20.0% |
| !!! | TAGATAATATGGTGTTTTTT+TGG | + | chr8.3:73750979-73750998 | MS.gene011102:intron | 20.0% |
| !!! | TCCCAAAAATTTCATTTTTT+TGG | + | chr8.3:73750020-73750039 | MS.gene011102:intron | 20.0% |
| !!! | TGCCAAAAAAATGAAATTTT+TGG | - | chr8.3:73750025-73750044 | None:intergenic | 20.0% |
| !!! | TTTATTTTGATTTAGCCATA+GGG | - | chr8.3:73750113-73750132 | None:intergenic | 20.0% |
| !!! | TTTTATTTTGATTTAGCCAT+AGG | - | chr8.3:73750114-73750133 | None:intergenic | 20.0% |
| !!! | TTTTTTTCAGCTAGAAAAAA+AGG | - | chr8.3:73753469-73753488 | None:intergenic | 20.0% |
| ! | AACTATTGATAGGGTTATAT+TGG | - | chr8.3:73751307-73751326 | None:intergenic | 25.0% |
| ! | AATCATAGAGCAAAAATAAC+AGG | - | chr8.3:73751480-73751499 | None:intergenic | 25.0% |
| ! | AATGGGGTATATAAGTTTAA+TGG | - | chr8.3:73750904-73750923 | None:intergenic | 25.0% |
| ! | ACCTATACCAATATAGAAAA+TGG | - | chr8.3:73752603-73752622 | None:intergenic | 25.0% |
| ! | ATCATAGAGCAAAAATAACA+GGG | - | chr8.3:73751479-73751498 | None:intergenic | 25.0% |
| ! | ATGGATAGATCTAGATAATA+TGG | + | chr8.3:73750968-73750987 | MS.gene011102:intron | 25.0% |
| ! | CTAGCTGAAAAAAATTAACA+AGG | + | chr8.3:73753475-73753494 | MS.gene011102:intron | 25.0% |
| ! | GAATCAGATCTATAAGAATT+GGG | + | chr8.3:73750441-73750460 | MS.gene011102:intron | 25.0% |
| ! | GCATACACTTAAAAATATGT+AGG | + | chr8.3:73751974-73751993 | MS.gene011102:intron | 25.0% |
| ! | TATAACTTATGCACTCTTTA+CGG | + | chr8.3:73750668-73750687 | MS.gene011102:intron | 25.0% |
| ! | TCATAACCAATCAAATCAAA+TGG | + | chr8.3:73753102-73753121 | MS.gene011102:intron | 25.0% |
| ! | TGAACTTACCATAAAATGAA+TGG | - | chr8.3:73753037-73753056 | None:intergenic | 25.0% |
| ! | TGAATCAGATCTATAAGAAT+TGG | + | chr8.3:73750440-73750459 | MS.gene011102:intron | 25.0% |
| ! | TGTATGTACATTTATTCAGA+AGG | - | chr8.3:73751923-73751942 | None:intergenic | 25.0% |
| ! | TTAAACTTATATACCCCATT+TGG | + | chr8.3:73750904-73750923 | MS.gene011102:intron | 25.0% |
| ! | TTTCCTTAAAATACTGGAAT+TGG | - | chr8.3:73752764-73752783 | None:intergenic | 25.0% |
| !! | AATGAATTTTTCTACAAGAG+AGG | - | chr8.3:73750062-73750081 | None:intergenic | 25.0% |
| !! | ACCATTTTCTATATTGGTAT+AGG | + | chr8.3:73752599-73752618 | MS.gene011102:intron | 25.0% |
| !! | GAATTCGTGTTTTATGAAAT+TGG | + | chr8.3:73750361-73750380 | MS.gene011102:intron | 25.0% |
| !! | TCTCTTACCATTTTCTATAT+TGG | + | chr8.3:73752593-73752612 | MS.gene011102:intron | 25.0% |
| !! | TTTATATTGATATATCGGCT+CGG | - | chr8.3:73752482-73752501 | None:intergenic | 25.0% |
| !! | TTTCCAATTCCAGTATTTTA+AGG | + | chr8.3:73752758-73752777 | MS.gene011102:intron | 25.0% |
| !! | TTTTTGCTCTATGATTCTTT+AGG | + | chr8.3:73751484-73751503 | MS.gene011102:intron | 25.0% |
| !!! | AAAAATGAAATTTTTGGGAG+AGG | - | chr8.3:73750019-73750038 | None:intergenic | 25.0% |
| !!! | AAAATGAAATTTTTGGGAGA+GGG | - | chr8.3:73750018-73750037 | None:intergenic | 25.0% |
| !!! | AAAATTTGGGTGTTGTTTTA+AGG | + | chr8.3:73752956-73752975 | MS.gene011102:intron | 25.0% |
| !!! | AAGTTTGCTAAAAGTAAAGA+AGG | - | chr8.3:73749985-73750004 | None:intergenic | 25.0% |
| !!! | AATTGACCATTTGATTTGAT+TGG | - | chr8.3:73753111-73753130 | None:intergenic | 25.0% |
| !!! | AGTTTGCTAAAAGTAAAGAA+GGG | - | chr8.3:73749984-73750003 | None:intergenic | 25.0% |
| !!! | ATAGTCTTTTAACTAACATG+TGG | - | chr8.3:73751741-73751760 | None:intergenic | 25.0% |
| !!! | ATTTTTTTTCCTTCCCTTTT+TGG | + | chr8.3:73752320-73752339 | MS.gene011102:intron | 25.0% |
| !!! | GCAATTCTAAATGTTTTGAT+TGG | + | chr8.3:73750840-73750859 | MS.gene011102:intron | 25.0% |
| !!! | GGATTAAACTTGTTATTTCA+TGG | + | chr8.3:73751371-73751390 | MS.gene011102:intron | 25.0% |
| !!! | GTAATTTTTTGTCTCGATAA+TGG | + | chr8.3:73750243-73750262 | MS.gene011102:intron | 25.0% |
| !!! | TAGTCTTTTAACTAACATGT+GGG | - | chr8.3:73751740-73751759 | None:intergenic | 25.0% |
| !!! | TATATGTTTTTTTTGCCCTA+TGG | + | chr8.3:73750095-73750114 | MS.gene011102:intron | 25.0% |
| !!! | TTGTTTTGTAGCTTTACATA+GGG | + | chr8.3:73753155-73753174 | MS.gene011102:intron | 25.0% |
| !!! | TTTGTTTTGTAGCTTTACAT+AGG | + | chr8.3:73753154-73753173 | MS.gene011102:intron | 25.0% |
| AAAGTAGAGATTAAGTACCA+TGG | - | chr8.3:73752226-73752245 | None:intergenic | 30.0% | |
| AAGAAAATGAGAGAGGAATA+TGG | + | chr8.3:73752026-73752045 | MS.gene011102:CDS | 30.0% | |
| AATAACTCTAGGCAAAAACT+AGG | - | chr8.3:73753511-73753530 | None:intergenic | 30.0% | |
| AATTGATGTTCTCACATCAA+AGG | + | chr8.3:73751257-73751276 | MS.gene011102:intron | 30.0% | |
| AGAAAATGAGAGAGGAATAT+GGG | + | chr8.3:73752027-73752046 | MS.gene011102:CDS | 30.0% | |
| AGGAAATAAAAGCTTTCTTG+AGG | - | chr8.3:73753449-73753468 | None:intergenic | 30.0% | |
| ATAACTCTAGGCAAAAACTA+GGG | - | chr8.3:73753510-73753529 | None:intergenic | 30.0% | |
| ATACGAGATTGTGAATTTGT+TGG | + | chr8.3:73750276-73750295 | MS.gene011102:intron | 30.0% | |
| ATTTGAATCAATGCAGATCT+TGG | + | chr8.3:73752354-73752373 | MS.gene011102:intron | 30.0% | |
| GGGTATATAAGTTTAATGGT+GGG | - | chr8.3:73750900-73750919 | None:intergenic | 30.0% | |
| GTAGATGCTTACAAAATCAA+AGG | - | chr8.3:73751878-73751897 | None:intergenic | 30.0% | |
| GTTATTAAACCAAAAAGGGA+AGG | - | chr8.3:73752332-73752351 | None:intergenic | 30.0% | |
| TAAACACTTGATGAATGATG+AGG | + | chr8.3:73753188-73753207 | MS.gene011102:CDS | 30.0% | |
| TAACAATGTCATGATGTCAT+GGG | + | chr8.3:73752848-73752867 | MS.gene011102:CDS | 30.0% | |
| TGCTTACAAAATCAAAGGAT+TGG | - | chr8.3:73751873-73751892 | None:intergenic | 30.0% | |
| TTAACAATGTCATGATGTCA+TGG | + | chr8.3:73752847-73752866 | MS.gene011102:CDS | 30.0% | |
| TTTATGGTGGTAAATTGATG+TGG | + | chr8.3:73750818-73750837 | MS.gene011102:intron | 30.0% | |
| ! | CTGGATTTTCCTTAAAATAC+TGG | - | chr8.3:73752770-73752789 | None:intergenic | 30.0% |
| ! | GTTTGCTAAAAGTAAAGAAG+GGG | - | chr8.3:73749983-73750002 | None:intergenic | 30.0% |
| ! | TAAGTTGAATGATTACCTTG+TGG | - | chr8.3:73752670-73752689 | None:intergenic | 30.0% |
| ! | TACGAGATTGTGAATTTGTT+GGG | + | chr8.3:73750277-73750296 | MS.gene011102:intron | 30.0% |
| ! | TATATAAGTTTAATGGTGGG+AGG | - | chr8.3:73750897-73750916 | None:intergenic | 30.0% |
| !! | AGATCTGCATTGATTCAAAT+TGG | - | chr8.3:73752354-73752373 | None:intergenic | 30.0% |
| AACAATGTCATGATGTCATG+GGG | + | chr8.3:73752849-73752868 | MS.gene011102:CDS | 35.0% | |
| AACAGCTGAAGCTATAAGAA+AGG | + | chr8.3:73752160-73752179 | MS.gene011102:CDS | 35.0% | |
| AATAGAGGAAAAGGCTCAAT+GGG | - | chr8.3:73751515-73751534 | None:intergenic | 35.0% | |
| ACCAAGTAGTACTAACATGT+GGG | - | chr8.3:73751604-73751623 | None:intergenic | 35.0% | |
| AGGAATATGGGAAATTGAAC+AGG | + | chr8.3:73752039-73752058 | MS.gene011102:CDS | 35.0% | |
| AGGACTATCCAAATGAAGAT+TGG | + | chr8.3:73752180-73752199 | MS.gene011102:CDS | 35.0% | |
| AGGATGTTGAGAACTTGAAA+TGG | + | chr8.3:73753208-73753227 | MS.gene011102:CDS | 35.0% | |
| ATCTGATGTTGAGTCAAAGA+CGG | + | chr8.3:73750553-73750572 | MS.gene011102:CDS | 35.0% | |
| ATTGGTTGTGTGTGCAAAAT+TGG | + | chr8.3:73750858-73750877 | MS.gene011102:intron | 35.0% | |
| CAAGAATCACGAAATTAGCT+GGG | - | chr8.3:73750422-73750441 | None:intergenic | 35.0% | |
| CAGATCAGTATATCCAAATG+GGG | - | chr8.3:73750920-73750939 | None:intergenic | 35.0% | |
| CGGTAGTTTCAATCGAATTT+GGG | + | chr8.3:73751350-73751369 | MS.gene011102:intron | 35.0% | |
| GAGATTAAGTACCATGGATA+AGG | - | chr8.3:73752220-73752239 | None:intergenic | 35.0% | |
| GCAGATCAGTATATCCAAAT+GGG | - | chr8.3:73750921-73750940 | None:intergenic | 35.0% | |
| GGAATATGGGAAATTGAACA+GGG | + | chr8.3:73752040-73752059 | MS.gene011102:CDS | 35.0% | |
| GGGGTATATAAGTTTAATGG+TGG | - | chr8.3:73750901-73750920 | None:intergenic | 35.0% | |
| GTCTAACAAATCTATACCGT+TGG | + | chr8.3:73750299-73750318 | MS.gene011102:intron | 35.0% | |
| GTTAGTACTACTTGGTATGT+TGG | + | chr8.3:73751608-73751627 | MS.gene011102:intron | 35.0% | |
| GTTGGTACTACTTGATATGT+TGG | + | chr8.3:73751626-73751645 | MS.gene011102:intron | 35.0% | |
| TAACTCTAGGCAAAAACTAG+GGG | - | chr8.3:73753509-73753528 | None:intergenic | 35.0% | |
| TAATAGAGGAAAAGGCTCAA+TGG | - | chr8.3:73751516-73751535 | None:intergenic | 35.0% | |
| TACCAAGTAGTACTAACATG+TGG | - | chr8.3:73751605-73751624 | None:intergenic | 35.0% | |
| TATGCAGAGTTGTTATAGTC+TGG | - | chr8.3:73752789-73752808 | None:intergenic | 35.0% | |
| TCAAGAATCACGAAATTAGC+TGG | - | chr8.3:73750423-73750442 | None:intergenic | 35.0% | |
| TCTGCATACAACACTAGATA+TGG | + | chr8.3:73752801-73752820 | MS.gene011102:CDS | 35.0% | |
| TGCAGATCAGTATATCCAAA+TGG | - | chr8.3:73750922-73750941 | None:intergenic | 35.0% | |
| TTGTGAACTTCTGAATGAAG+TGG | + | chr8.3:73752085-73752104 | MS.gene011102:CDS | 35.0% | |
| TTGTGATCCACAGTAGAATT+AGG | - | chr8.3:73751673-73751692 | None:intergenic | 35.0% | |
| ! | ATTGAGCCTTTTCCTCTATT+AGG | + | chr8.3:73751515-73751534 | MS.gene011102:intron | 35.0% |
| ! | GGAATTTACTCTGAGAAATG+TGG | + | chr8.3:73752822-73752841 | MS.gene011102:CDS | 35.0% |
| ! | TCATGCTAACTTGTACTTAG+AGG | + | chr8.3:73751047-73751066 | MS.gene011102:intron | 35.0% |
| ! | TTTGTAGCTTTACATAGGGA+AGG | + | chr8.3:73753159-73753178 | MS.gene011102:intron | 35.0% |
| !! | AGTGAGAGTTGATGTTGAAA+AGG | + | chr8.3:73753384-73753403 | MS.gene011102:CDS | 35.0% |
| !!! | ATTTGGGTGTTGTTTTAAGG+TGG | + | chr8.3:73752959-73752978 | MS.gene011102:intron | 35.0% |
| AAGTGCAGCCAATCTTCATT+TGG | - | chr8.3:73752191-73752210 | None:intergenic | 40.0% | |
| AATTCGATTGAAACTACCGC+CGG | - | chr8.3:73751349-73751368 | None:intergenic | 40.0% | |
| ACAGGTGAAGAAAATGAGAG+AGG | + | chr8.3:73752019-73752038 | MS.gene011102:intron | 40.0% | |
| AGACACACTTCAACACTAGT+GGG | - | chr8.3:73751543-73751562 | None:intergenic | 40.0% | |
| ATAGGTGACATATACCCAGT+TGG | + | chr8.3:73752617-73752636 | MS.gene011102:intron | 40.0% | |
| ATTATGCTGCTGAAAGTGAG+AGG | + | chr8.3:73751806-73751825 | MS.gene011102:CDS | 40.0% | |
| ATTTGTGGTTCATCCAAGTC+AGG | - | chr8.3:73752125-73752144 | None:intergenic | 40.0% | |
| CAAATCTATACCGTTGGATC+TGG | + | chr8.3:73750305-73750324 | MS.gene011102:intron | 40.0% | |
| CATCAAATCTGCAACCAACT+GGG | - | chr8.3:73752634-73752653 | None:intergenic | 40.0% | |
| CTACATCTCCCTCATTGAAA+AGG | + | chr8.3:73753417-73753436 | MS.gene011102:CDS | 40.0% | |
| GAATAAGACTACTCTACCCT+CGG | + | chr8.3:73752989-73753008 | MS.gene011102:CDS | 40.0% | |
| GCGGTAGTTTCAATCGAATT+TGG | + | chr8.3:73751349-73751368 | MS.gene011102:intron | 40.0% | |
| GGTTGTTAATGAGACAGAAG+TGG | + | chr8.3:73750577-73750596 | MS.gene011102:CDS | 40.0% | |
| GTTGAATGATTACCTTGTGG+TGG | - | chr8.3:73752667-73752686 | None:intergenic | 40.0% | |
| TAATGAGACAGAAGTGGAGT+TGG | + | chr8.3:73750583-73750602 | MS.gene011102:CDS | 40.0% | |
| TAGCTTCAGCTGTTTGTAGA+AGG | - | chr8.3:73752154-73752173 | None:intergenic | 40.0% | |
| TCAATGAGGGAGATGTAGTA+TGG | - | chr8.3:73753415-73753434 | None:intergenic | 40.0% | |
| TCACTTGCCTAATTCTACTG+TGG | + | chr8.3:73751663-73751682 | MS.gene011102:intron | 40.0% | |
| TCATCAAATCTGCAACCAAC+TGG | - | chr8.3:73752635-73752654 | None:intergenic | 40.0% | |
| TCCCACATGTTAGTACTACT+TGG | + | chr8.3:73751600-73751619 | MS.gene011102:intron | 40.0% | |
| TGAACTTCTGAATGAAGTGG+TGG | + | chr8.3:73752088-73752107 | MS.gene011102:CDS | 40.0% | |
| TTTGTGGTTCATCCAAGTCA+GGG | - | chr8.3:73752124-73752143 | None:intergenic | 40.0% | |
| ! | AAAAGTGTGCCCAAATGAGT+TGG | - | chr8.3:73750633-73750652 | None:intergenic | 40.0% |
| ! | ACTCATTTGGGCACACTTTT+AGG | + | chr8.3:73750633-73750652 | MS.gene011102:CDS | 40.0% |
| ! | AGGTGCTTACCTTTTCAATG+AGG | - | chr8.3:73753429-73753448 | None:intergenic | 40.0% |
| ! | GGTGCTTACCTTTTCAATGA+GGG | - | chr8.3:73753428-73753447 | None:intergenic | 40.0% |
| !! | TGCTTCTCCTTCCTAGTTTT+GGG | + | chr8.3:73752382-73752401 | MS.gene011102:CDS | 40.0% |
| !! | TGTAGAAGGTGCTCAATTTG+TGG | - | chr8.3:73752140-73752159 | None:intergenic | 40.0% |
| !!! | GTGTTGTTTTAAGGTGGCAA+AGG | + | chr8.3:73752965-73752984 | MS.gene011102:intron | 40.0% |
| ACAGGGTAGAGATGAGCATA+TGG | + | chr8.3:73752057-73752076 | MS.gene011102:CDS | 45.0% | |
| ATCGGCGGCTAACTATTGAT+AGG | - | chr8.3:73751317-73751336 | None:intergenic | 45.0% | |
| ATGATGAACATAGCAGCCGA+GGG | - | chr8.3:73753008-73753027 | None:intergenic | 45.0% | |
| ATTGTCCGATCCAGATCCAA+CGG | - | chr8.3:73750318-73750337 | None:intergenic | 45.0% | |
| CAGGGTAGAGATGAGCATAT+GGG | + | chr8.3:73752058-73752077 | MS.gene011102:CDS | 45.0% | |
| CTATACCGTTGGATCTGGAT+CGG | + | chr8.3:73750310-73750329 | MS.gene011102:intron | 45.0% | |
| GACACACTTCAACACTAGTG+GGG | - | chr8.3:73751542-73751561 | None:intergenic | 45.0% | |
| GAGACACACTTCAACACTAG+TGG | - | chr8.3:73751544-73751563 | None:intergenic | 45.0% | |
| GCCTGATTGACACAGTAAAG+GGG | - | chr8.3:73751457-73751476 | None:intergenic | 45.0% | |
| GCTCTATGATTCTTTAGGCC+AGG | + | chr8.3:73751489-73751508 | MS.gene011102:intron | 45.0% | |
| GGCCTGATTGACACAGTAAA+GGG | - | chr8.3:73751458-73751477 | None:intergenic | 45.0% | |
| TATCAATAGTTAGCCGCCGA+TGG | + | chr8.3:73751316-73751335 | MS.gene011102:intron | 45.0% | |
| TATGATGAACATAGCAGCCG+AGG | - | chr8.3:73753009-73753028 | None:intergenic | 45.0% | |
| TCCCCTTTACTGTGTCAATC+AGG | + | chr8.3:73751453-73751472 | MS.gene011102:intron | 45.0% | |
| TCGGCGGCTAACTATTGATA+GGG | - | chr8.3:73751316-73751335 | None:intergenic | 45.0% | |
| TGAATCCATTGTCCACCACA+AGG | + | chr8.3:73752652-73752671 | MS.gene011102:CDS | 45.0% | |
| TGATGTTGAGTCAAAGACGG+TGG | + | chr8.3:73750556-73750575 | MS.gene011102:CDS | 45.0% | |
| TGGGGTCCTAATAGAGGAAA+AGG | - | chr8.3:73751524-73751543 | None:intergenic | 45.0% | |
| ! | GAAGATTGGCTGCACTTAAC+TGG | + | chr8.3:73752194-73752213 | MS.gene011102:CDS | 45.0% |
| ! | GTGCTTCTCCTTCCTAGTTT+TGG | + | chr8.3:73752381-73752400 | MS.gene011102:CDS | 45.0% |
| ! | TACCGCCGGTTAAAATCCAT+CGG | - | chr8.3:73751335-73751354 | None:intergenic | 45.0% |
| !! | CACTTAACTGGCCTTATCCA+TGG | + | chr8.3:73752206-73752225 | MS.gene011102:CDS | 45.0% |
| !! | GATTACCTTGTGGTGGACAA+TGG | - | chr8.3:73752660-73752679 | None:intergenic | 45.0% |
| !! | TGGTGGATTTGTTATGCCAC+AGG | + | chr8.3:73750607-73750626 | MS.gene011102:CDS | 45.0% |
| !! | TTTTGGGGGACTTCCTCAAT+GGG | + | chr8.3:73752398-73752417 | MS.gene011102:CDS | 45.0% |
| !!! | CTTCTCCTTCCTAGTTTTGG+GGG | + | chr8.3:73752384-73752403 | MS.gene011102:CDS | 45.0% |
| !!! | GCTTCTCCTTCCTAGTTTTG+GGG | + | chr8.3:73752383-73752402 | MS.gene011102:CDS | 45.0% |
| !! | TATTATAATAAAATTATTAC+AGG | + | chr8.3:73750530-73750549 | MS.gene011102:intron | 5.0% |
| AAGTGAGAGGCAAGAAGGAG+TGG | + | chr8.3:73751819-73751838 | MS.gene011102:CDS | 50.0% | |
| ACAGAAGTGGAGTTGGATGG+TGG | + | chr8.3:73750590-73750609 | MS.gene011102:CDS | 50.0% | |
| ACTTCCCTGCAAAGCTGAAG+TGG | + | chr8.3:73753565-73753584 | MS.gene011102:CDS | 50.0% | |
| ATGCCACAGGCCAACTCATT+TGG | + | chr8.3:73750620-73750639 | MS.gene011102:CDS | 50.0% | |
| CACTAGTGGGGTCCTAATAG+AGG | - | chr8.3:73751530-73751549 | None:intergenic | 50.0% | |
| GAAGTCCCCCAAAACTAGGA+AGG | - | chr8.3:73752392-73752411 | None:intergenic | 50.0% | |
| GAGACAGAAGTGGAGTTGGA+TGG | + | chr8.3:73750587-73750606 | MS.gene011102:CDS | 50.0% | |
| GCTGAAAGTGAGAGGCAAGA+AGG | + | chr8.3:73751814-73751833 | MS.gene011102:CDS | 50.0% | |
| GGGCCTGATTGACACAGTAA+AGG | - | chr8.3:73751459-73751478 | None:intergenic | 50.0% | |
| TGAGGAAGTCCCCCAAAACT+AGG | - | chr8.3:73752396-73752415 | None:intergenic | 50.0% | |
| TGCCACAGGCCAACTCATTT+GGG | + | chr8.3:73750621-73750640 | MS.gene011102:CDS | 50.0% | |
| TTGCCTACAACAGCCCATTG+AGG | - | chr8.3:73752414-73752433 | None:intergenic | 50.0% | |
| !! | AGCCGCCGATGGATTTTAAC+CGG | + | chr8.3:73751327-73751346 | MS.gene011102:intron | 50.0% |
| !! | CTTCCTCAATGGGCTGTTGT+AGG | + | chr8.3:73752408-73752427 | MS.gene011102:CDS | 50.0% |
| !!! | GTTTTGGGGGACTTCCTCAA+TGG | + | chr8.3:73752397-73752416 | MS.gene011102:CDS | 50.0% |
| AGGAAAAGGCTCAATGGGCC+TGG | - | chr8.3:73751510-73751529 | None:intergenic | 55.0% | |
| GGATGAGAGTGACCCTGACT+TGG | + | chr8.3:73752109-73752128 | MS.gene011102:CDS | 55.0% | |
| ! | CGCCGGTTAAAATCCATCGG+CGG | - | chr8.3:73751332-73751351 | None:intergenic | 55.0% |
| ! | TGCCCAAATGAGTTGGCCTG+TGG | - | chr8.3:73750626-73750645 | None:intergenic | 55.0% |
| !! | CGCCGATGGATTTTAACCGG+CGG | + | chr8.3:73751330-73751349 | MS.gene011102:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 73749935 | 73753590 | 73749935 | ID=MS.gene011102 |
| chr8.3 | mRNA | 73749935 | 73753590 | 73749935 | ID=MS.gene011102.t1;Parent=MS.gene011102 |
| chr8.3 | exon | 73749935 | 73749968 | 73749935 | ID=MS.gene011102.t1.exon1;Parent=MS.gene011102.t1 |
| chr8.3 | CDS | 73749935 | 73749968 | 73749935 | ID=cds.MS.gene011102.t1;Parent=MS.gene011102.t1 |
| chr8.3 | exon | 73750552 | 73750654 | 73750552 | ID=MS.gene011102.t1.exon2;Parent=MS.gene011102.t1 |
| chr8.3 | CDS | 73750552 | 73750654 | 73750552 | ID=cds.MS.gene011102.t1;Parent=MS.gene011102.t1 |
| chr8.3 | exon | 73751804 | 73751885 | 73751804 | ID=MS.gene011102.t1.exon3;Parent=MS.gene011102.t1 |
| chr8.3 | CDS | 73751804 | 73751885 | 73751804 | ID=cds.MS.gene011102.t1;Parent=MS.gene011102.t1 |
| chr8.3 | exon | 73752023 | 73752227 | 73752023 | ID=MS.gene011102.t1.exon4;Parent=MS.gene011102.t1 |
| chr8.3 | CDS | 73752023 | 73752227 | 73752023 | ID=cds.MS.gene011102.t1;Parent=MS.gene011102.t1 |
| chr8.3 | exon | 73752370 | 73752429 | 73752370 | ID=MS.gene011102.t1.exon5;Parent=MS.gene011102.t1 |
| chr8.3 | CDS | 73752370 | 73752429 | 73752370 | ID=cds.MS.gene011102.t1;Parent=MS.gene011102.t1 |
| chr8.3 | exon | 73752621 | 73752673 | 73752621 | ID=MS.gene011102.t1.exon6;Parent=MS.gene011102.t1 |
| chr8.3 | CDS | 73752621 | 73752673 | 73752621 | ID=cds.MS.gene011102.t1;Parent=MS.gene011102.t1 |
| chr8.3 | exon | 73752771 | 73752893 | 73752771 | ID=MS.gene011102.t1.exon7;Parent=MS.gene011102.t1 |
| chr8.3 | CDS | 73752771 | 73752893 | 73752771 | ID=cds.MS.gene011102.t1;Parent=MS.gene011102.t1 |
| chr8.3 | exon | 73752978 | 73753047 | 73752978 | ID=MS.gene011102.t1.exon8;Parent=MS.gene011102.t1 |
| chr8.3 | CDS | 73752978 | 73753047 | 73752978 | ID=cds.MS.gene011102.t1;Parent=MS.gene011102.t1 |
| chr8.3 | exon | 73753166 | 73753244 | 73753166 | ID=MS.gene011102.t1.exon9;Parent=MS.gene011102.t1 |
| chr8.3 | CDS | 73753166 | 73753244 | 73753166 | ID=cds.MS.gene011102.t1;Parent=MS.gene011102.t1 |
| chr8.3 | exon | 73753357 | 73753438 | 73753357 | ID=MS.gene011102.t1.exon10;Parent=MS.gene011102.t1 |
| chr8.3 | CDS | 73753357 | 73753438 | 73753357 | ID=cds.MS.gene011102.t1;Parent=MS.gene011102.t1 |
| chr8.3 | exon | 73753564 | 73753590 | 73753564 | ID=MS.gene011102.t1.exon11;Parent=MS.gene011102.t1 |
| chr8.3 | CDS | 73753564 | 73753590 | 73753564 | ID=cds.MS.gene011102.t1;Parent=MS.gene011102.t1 |
| Gene Sequence |
| Protein sequence |
